g.arboreum_cottongen_reftransV1_0017722, g.arboreum_cottongen_reftransV1_0017722 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0017722
Unique Nameg.arboreum_cottongen_reftransV1_0017722
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1847
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr11chromosomeg.arboreum_cottongen_reftransV1_0017722:1..1847 .
Chr11:63024917..63028626 -		n/a
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: B9IDN1_POPTR (ACYL-COA binding family protein OS=Populus trichocarpa GN=POPTR_0015s01250g PE=4 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 1.400e-138
Identity = 245/357 (68.63%), Postives = 281/357 (78.71%), Query Frame = 3 
Query:  222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKS---DSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQR 1283
            MADWQ LLQSIF+GL+FSYLLAKLIS+VVSF++DNL ITR             +    +       H   H     DSVVAE GS+R ES    DG  DDDDDDWEGVE TELD+ FSAATAFVAAAAADR+S KV +++QLQLYG YKIATEGPCT+  PSALKMTARAKWQAW KLGAMPPEDAMQKYID++TELYP+WA+GSAM K       SKD KGPMGPVFS+FVYEEES  +LKMDAIH FAREG+++NL+K I+ GVSV+L+DSEGRTP+HWAVDRGHL IAE L+ +NA++NAKDNEGQTPLHYA +CERE IA++LVKQNAD D KDNDG S  DLC+S WP LQR
Sbjct:    1 MADWQHLLQSIFIGLLFSYLLAKLISIVVSFQNDNLHITRNPKPQ-------SNDPDPAPAPAPAVHHYQHSHGDVDSVVAEQGSVRNESVSGSDGGGDDDDDDWEGVESTELDEMFSAATAFVAAAAADRVSLKVSSDLQLQLYGYYKIATEGPCTSAPPSALKMTARAKWQAWQKLGAMPPEDAMQKYIDIITELYPTWASGSAMSKDRDGVGPSKDGKGPMGPVFSTFVYEEESGTELKMDAIHAFAREGEVNNLIKCIDGGVSVNLKDSEGRTPLHWAVDRGHLNIAEVLVGKNADINAKDNEGQTPLHYAAVCEREAIAEYLVKQNADTDAKDNDGQSAHDLCESDWPCLQR 350
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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A061G203_THECC (Acyl-CoA binding protein 2 isoform 3 OS=Theobroma cacao GN=TCM_015446 PE=4 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 1.453e-138
Identity = 243/302 (80.46%), Postives = 274/302 (90.73%), Query Frame = 3 
Query:  222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXX-WEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAK 1124
            MADWQQLLQSI +GL+FSYLLAKLISLVVSFK+DNLSI RAR+++VQ + K+D SGS S+P   T+  G H +DSV+AE+GS+R ESDG  D  DDDDDDD WEGVECTELD+AFSAATAFVAAAAADRLSQKV +E+QLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPE+AMQKYID+VTELYP+WAAGSAM KGGA+NA+S+D +GPMGPVFSSFVYEEES N+LKMDAIH FAREG+LDNLLK IES VSV+L+DSEGRTP+HWAVDRGH KI EAL+SRNA+VNAK
Sbjct:    1 MADWQQLLQSILIGLLFSYLLAKLISLVVSFKEDNLSIARARTAHVQAHNKLD-SGSESDPHVRTDFGGPHDADSVIAEVGSVRNESDGGDDDGDDDDDDDDWEGVECTELDEAFSAATAFVAAAAADRLSQKVSSEMQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEEAMQKYIDIVTELYPTWAAGSAMSKGGAENAASRDARGPMGPVFSSFVYEEESGNELKMDAIHAFAREGELDNLLKCIESDVSVNLRDSEGRTPLHWAVDRGHFKITEALVSRNADVNAK 301
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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A058ZYY6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00399 PE=4 SV=1)

HSP 1 Score: 419.468 bits (1077), Expect = 4.541e-138
Identity = 236/365 (64.66%), Postives = 286/365 (78.36%), Query Frame = 3 
Query:  228 DWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYE---------KIDDSGSG--SEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAM-GKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRA 1286
            DWQ LLQS+F+GLIFSYLLAKLISL+ +FK++ L++ RA +                K   SG+G  +EP G+        SDSVVAE GS+R ES    D      D DWEGVE TELD+ FSAATAF AAAAADRLSQ+V ++ QLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAW+KLGAMPPE+AMQKYID+VTELYP+W AGS+M  KG   +A S + KGPMGPVFS+FV+EE    + K+DAIH FAREG++DNLLK +E+GVSV+++DSEGRTP+HWAVDRGH K+ E L+S++A+VNAKD+EGQTPLHYAV+C+RE IA+FLVKQNA  D KDNDGN+P D+C+S WPW++ A
Sbjct:    4 DWQPLLQSVFIGLIFSYLLAKLISLLFTFKEEGLTVARAPAPAPAPAPAPAPAAAAAKRPGSGAGDAAEPDGADGGGESRDSDSVVAEHGSVRNESAAGTDDDGGGSDSDWEGVESTELDEIFSAATAFAAAAAADRLSQRVSSDAQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWNKLGAMPPEEAMQKYIDIVTELYPTWIAGSSMKSKGSHGDAPSTEAKGPMGPVFSTFVHEEPG-TESKLDAIHAFAREGEIDNLLKCVEAGVSVNVKDSEGRTPLHWAVDRGHSKVVEMLVSKDADVNAKDDEGQTPLHYAVVCDREGIAEFLVKQNASTDVKDNDGNTPHDVCESDWPWMRSA 367
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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: E0CV74_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g01570 PE=4 SV=1)

HSP 1 Score: 416.387 bits (1069), Expect = 3.200e-137
Identity = 237/358 (66.20%), Postives = 276/358 (77.09%), Query Frame = 3 
Query:  228 DWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQG-YEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKG--GADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292
            +WQQL+QS+F GL+FSYL AKLIS+V+SF+D+NLS+TR      QG     DD  +GS+  G +E               S+ AE      G   DDDDDWEGVE TELD+ FSAATAFVAA AADRLSQKV N+VQLQLYGLYKIATEGPC+APQPSALKMTARAKWQAW KLGAMPPE+AMQKYI +VTELYP+WA GS       G  +A S D KGPMGPVFS+FVYEEE   +LKMDAIH FAREG++DNLLK I++GVSV L+DSEGRTP+HWAVDRGHL + E LL+  A+VNAKD+EGQ+PLHYAV+CERE IA+FLVKQNAD +  DNDG SP +LC+S WPW+Q A K
Sbjct:    4 EWQQLIQSVFFGLVFSYLFAKLISIVISFRDENLSLTRDSKPESQGGAASADDDSAGSQKSGGSEGEE------------SLLAEKGSGSSGSLLDDDDDWEGVESTELDEEFSAATAFVAATAADRLSQKVSNDVQLQLYGLYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIAIVTELYPTWATGSTNKSKDEGGSSAPSGDAKGPMGPVFSTFVYEEECGTELKMDAIHAFAREGEVDNLLKCIDNGVSVDLKDSEGRTPLHWAVDRGHLNLTELLLNHGADVNAKDHEGQSPLHYAVVCEREAIAEFLVKQNADINAMDNDGASPFELCESNWPWMQGAAK 349
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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: I1KAV2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 413.69 bits (1062), Expect = 3.901e-136
Identity = 236/360 (65.56%), Postives = 285/360 (79.17%), Query Frame = 3 
Query:  222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGY--EKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAM-GKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292
            MA+WQ LLQSI +GLIFSYLLAKLIS+VVSFKDDNL++TRA ++       E+ +D+    + + S       + +SVVAE GS+R +SDGD D         WEGVE TELD+AFSAATAFVAAAAADRLSQKV ++VQLQLYGLYKIATEGPC+ PQPS LKMTARAKWQAW KLGAMPPEDAMQKYID+VTE+YP+W  GS++  K G       + KGPMGPVFS+FVYEEE  +D +M+AIH FAREGD+ NLLK IE+GVS++L+DSEGRTP+HWAVDRGHL + E L+ +NA+VNAKDN+GQTPLHYAV CERE IA++LVK NAD  +KDNDG+SP D+C+S WP +Q  G+
Sbjct:    1 MAEWQSLLQSILVGLIFSYLLAKLISIVVSFKDDNLTVTRASAAETTATRAEQFEDALKRDDAVSSDARP--FEEESVVAEHGSVRIDSDGDYDDD-------WEGVESTELDEAFSAATAFVAAAAADRLSQKVSSDVQLQLYGLYKIATEGPCSTPQPSPLKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTEIYPTWLDGSSLRNKSGDSGGHGSEAKGPMGPVFSTFVYEEEYGSDSQMEAIHGFAREGDMANLLKCIENGVSMNLKDSEGRTPLHWAVDRGHLNVTELLVGKNADVNAKDNDGQTPLHYAVTCEREAIAEYLVKHNADIYSKDNDGSSPRDICESNWPCMQHVGE 351
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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: V4MGU4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025574mg PE=4 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 4.829e-135
Identity = 234/359 (65.18%), Postives = 282/359 (78.55%), Query Frame = 3 
Query:  222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQ-GYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSA-MGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292
            M DW  L QS+ LGLIFSYLLAKLIS+VV+FK+DNLS+TR     ++   E +D     S  +G     G  ++DS+VAE GS RA+S       DDD    WEGVE TELD+AFSAAT FV  AAADRLSQKVP++VQ QLYGLYKIATEGPCTAPQPSALKMTARAKWQAW KLGAMPPE+AM+KYI++VT+LYP+W  G    G  G D+A+S +  G MGPVFSS VYEEESEN+LK+DAIH FAREG+++NLLKSIESG+ V+ +DSEGRTP+HWA+DRGH  IA+ L+   A+VNAKDNEGQTPLHYAV+C+RE IA+FLVKQ A+  +KDNDGNSP+DLC+S WPW++ + K
Sbjct:    1 MGDWAPLAQSVILGLIFSYLLAKLISIVVTFKEDNLSLTRHPEPELEIKPEVVDSRRIDSSTVG---FGGGGEADSLVAEQGSSRADSVAGDSEEDDD----WEGVESTELDEAFSAATLFVTTAAADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIEIVTQLYPTWLDGGVRAGSRGGDDAAS-NSGGTMGPVFSSLVYEEESENELKIDAIHAFAREGEIENLLKSIESGIPVNAKDSEGRTPLHWAIDRGHFNIAKVLVDNKADVNAKDNEGQTPLHYAVVCDRESIAEFLVKQKANTASKDNDGNSPLDLCESDWPWIRDSEK 351
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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A0A0KN62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139300 PE=4 SV=1)

HSP 1 Score: 410.609 bits (1054), Expect = 7.543e-135
Identity = 235/366 (64.21%), Postives = 288/366 (78.69%), Query Frame = 3 
Query:  222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNV----QGYEKID----DSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAG-SAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292
            MA+WQ  LQ++F+GLIFSYL+AKLIS+VVSFK+DNLS++RA S+ +    +G  K      D GSGS   G       H++DSV+AE GS+R +S G  D  DDD    WEGVE TELD+ FSAATAFVAA+AADRLS KV NEVQLQLYG YKIATEGPC+ PQPSALKMTARAKWQAW KLGAMPPE+AMQKYID+VTEL+PSW AG S   K G  +A SKD +GPMGPVFS+FVYEE   N+L+++ IH FAREG+L+NLLK IE+GVSV+++DSEGRTP+HWAVDRGH  + E L+SRNA+++ KD +GQTPLHYAV+C+RE IA++LVK NA+   KDN+G SP D+C+S WP++  A K
Sbjct:    1 MAEWQDFLQTLFIGLIFSYLVAKLISIVVSFKEDNLSLSRATSTPIPQSNEGVSKTKPIETDIGSGSGDFGFA-----HEADSVIAEHGSVRNDSIGGSDTDDDD----WEGVESTELDELFSAATAFVAASAADRLSPKVSNEVQLQLYGYYKIATEGPCSTPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELFPSWVAGASGKSKDGNADARSKDSRGPMGPVFSTFVYEETG-NELELEDIHGFAREGELENLLKCIENGVSVNIKDSEGRTPLHWAVDRGHSNVVEVLVSRNADIDVKDVDGQTPLHYAVVCDREGIAEYLVKNNANVSEKDNEGKSPCDICESNWPFMVSAKK 356
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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A0D2NVM9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G202200 PE=4 SV=1)

HSP 1 Score: 404.06 bits (1037), Expect = 5.402e-134
Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 3 
Query:  195 MSGFWLIDSMADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDL 935
            MSGFWLIDSMADWQQLLQSI LGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGS+PIGSTEHLGLHKSDSVVAELGSIRAESDGDGDGVDDDDDD WEGVECTELDDAFSAATAFVAAAAADRLSQKVPNEVQLQLYGLYK+ATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPVFSSFVYEEESENDL
Sbjct:    1 MSGFWLIDSMADWQQLLQSIILGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSDPIGSTEHLGLHKSDSVVAELGSIRAESDGDGDGVDDDDDD-WEGVECTELDDAFSAATAFVAAAAADRLSQKVPNEVQLQLYGLYKVATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPVFSSFVYEEESENDL 246
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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A0D2RZI8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G202200 PE=4 SV=1)

HSP 1 Score: 404.06 bits (1037), Expect = 1.289e-133
Identity = 242/247 (97.98%), Postives = 244/247 (98.79%), Query Frame = 3 
Query:  195 MSGFWLIDSMADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDL 935
            MSGFWLIDSMADWQQLLQSI LGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGS+PIGSTEHLGLHKSDSVVAELGSIRAESDGDGDGVDDDDDD WEGVECTELDDAFSAATAFVAAAAADRLSQKVPNEVQLQLYGLYK+ATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPVFSSFVYEEESEND 
Sbjct:    1 MSGFWLIDSMADWQQLLQSIILGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSDPIGSTEHLGLHKSDSVVAELGSIRAESDGDGDGVDDDDDD-WEGVECTELDDAFSAATAFVAAAAADRLSQKVPNEVQLQLYGLYKVATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPVFSSFVYEEESENDF 246
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A078JD86_BRANA (BnaC02g44810D protein OS=Brassica napus GN=BnaC02g44810D PE=4 SV=1)

HSP 1 Score: 406.757 bits (1044), Expect = 1.352e-133
Identity = 226/352 (64.20%), Postives = 277/352 (78.69%), Query Frame = 3 
Query:  228 DWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQG-YEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQ 1280
            DW  L QS+  GLIF+YLLAKLIS++V+FKDDNLS+TR+  +  +  Y +  DS +G             ++DS+VAE GS+R + D D D         WEGVE TELD+AFSAATAFVAAAA+DRLSQKV NE+QLQLYGLYKIATEG CTAPQPSALKMTARAKWQAWHKLGAMP E+AM+KYID+VT LYP+W  G + G   + +A+  + + PMGPVFSS VYEEESENDLK+DA+H FAREG+++NLLK IESG+ V+ +DSEGRTP+HWA+DRGHL +A+AL+ +NA+VNAKDNEGQT LHYAV+CERE +A+FLVKQ AD   KD DGNSP+DLC+S W W++
Sbjct:    4 DWYHLAQSLIFGLIFAYLLAKLISILVAFKDDNLSLTRSHDAQSENDYHRKVDSSTG-------------ETDSLVAEQGSLRGDEDDDDD---------WEGVESTELDEAFSAATAFVAAAASDRLSQKVSNELQLQLYGLYKIATEGACTAPQPSALKMTARAKWQAWHKLGAMPAEEAMEKYIDLVTHLYPAWVEGGSKGSNRSGDAAGSNSRAPMGPVFSSLVYEEESENDLKIDAVHAFAREGEVENLLKCIESGIPVNARDSEGRTPLHWAIDRGHLNVAKALVDKNADVNAKDNEGQTALHYAVVCEREALAEFLVKQKADTSIKDEDGNSPLDLCESEWSWMR 333
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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: YQMA_SCHPO (Ankyrin repeat-containing protein P1E11.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCP1E11.10 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.421e-12
Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 3 
Query:  960 AREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQ-NADKDTKDNDG 1235
            A +G  D +LK ++SG+S +  D  G TP+H AV  GH  + + L+ R  ++N +D +G+TPL    +CE+ +IA  L+ Q NAD   K+NDG
Sbjct:   12 ASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDGETPL---FVCEKLEIAHDLINQYNADTTVKNNDG 101
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ANKR1_RABIT (Ankyrin repeat domain-containing protein 1 OS=Oryctolagus cuniculus GN=ANKRD1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.482e-12
Identity = 41/107 (38.32%), Postives = 60/107 (56.07%), Query Frame = 3 
Query:  933 LKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL 1253
            L+  AIH   R G+L+ L   +  G  +  +D    T +H AV  GH + AE L++  A++NAKD EG TPLH AV   R  + + L+   AD   K++ G +P+DL
Sbjct:  185 LESTAIHWACRGGNLEVLKLLLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLIMYGADLTIKNSAGKTPMDL 291

HSP 2 Score: 63.929 bits (154), Expect = 1.022e-9
Identity = 34/107 (31.78%), Postives = 60/107 (56.07%), Query Frame = 3 
Query:  927 NDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPV 1247
            ++ K  A+H    EG L  + K +E+G  +  +D    T +HWA   G+L++ + LL++ A ++A+D    T LH AV     + A+ L+   AD + KD +G++P+
Sbjct:  150 DEYKRTALHRACLEGHLAIVEKLMEAGAQIEFRDMLESTAIHWACRGGNLEVLKLLLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIACEADLNAKDREGDTPL 256
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ANKR2_MOUSE (Ankyrin repeat domain-containing protein 2 OS=Mus musculus GN=Ankrd2 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 5.289e-12
Identity = 37/107 (34.58%), Postives = 58/107 (54.21%), Query Frame = 3 
Query:  927 NDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPV 1247
            ++ +  A+H  + EG ++ L K +E+G +V  QD    T MHWA   GHL++   L SR A+ N +D    TPLH AV     +I +  +    D + KD +G+S +
Sbjct:  147 DEFRRTALHRASLEGHMEILEKLLENGATVDFQDRLDCTAMHWACRGGHLEVVRLLQSRGADTNVRDKLLSTPLHVAVRTGHVEIVEHFLSLGLDINAKDREGDSAL 253

HSP 2 Score: 67.3958 bits (163), Expect = 9.690e-11
Identity = 43/110 (39.09%), Postives = 58/110 (52.73%), Query Frame = 3 
Query:  933 LKMDAIHTFAREGDLD--NLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLC 1256
            L   A+H   R G L+   LL+S   G   +++D    TP+H AV  GH++I E  LS   ++NAKD EG + LH AV   R  I K L+   AD   K+  G +P DL 
Sbjct:  182 LDCTAMHWACRGGHLEVVRLLQS--RGADTNVRDKLLSTPLHVAVRTGHVEIVEHFLSLGLDINAKDREGDSALHDAVRLNRYKIIKLLLLHGADMMAKNLAGKTPTDLV 289
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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: AKRP_ARATH (Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana GN=AKRP PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.827e-12
Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 3 
Query: 1026 DSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLC 1256
            D EG T MH+AV        + LL  NA++NA+D +G TPLH AV   R DI K L+ + AD + K+ DG +P+ LC
Sbjct:  323 DDEGATLMHYAVQTASAPTIKLLLLYNADINAQDRDGWTPLHVAVQARRSDIVKLLLIKGADIEVKNKDGLTPLGLC 399
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ANKE1_MOUSE (Ankyrin repeat and EF-hand domain-containing protein 1 OS=Mus musculus GN=Ankef1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.988e-12
Identity = 36/100 (36.00%), Postives = 60/100 (60.00%), Query Frame = 3 
Query:  948 IHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPV 1247
            I    + GDL +L K+IE+G+ V ++D+  +TP+  A   G++ + + L+ + ANVNA DN   TPLH+A    ++DI + LVK  A  D    + ++P+
Sbjct:  496 ISFITKAGDLASLKKAIETGIPVDMKDNTYKTPLMIACASGNIDVVKFLIEKGANVNATDNFLWTPLHFACHAGQQDIVELLVKAGASIDATSINNSTPL 595
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9IDN1_POPTR1.400e-13868.63ACYL-COA binding family protein OS=Populus trichoc... [more]
A0A061G203_THECC1.453e-13880.46Acyl-CoA binding protein 2 isoform 3 OS=Theobroma ... [more]
A0A058ZYY6_EUCGR4.541e-13864.66Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
E0CV74_VITVI3.200e-13766.20Putative uncharacterized protein OS=Vitis vinifera... [more]
I1KAV2_SOYBN3.901e-13665.56Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
V4MGU4_EUTSA4.829e-13565.18Uncharacterized protein OS=Eutrema salsugineum GN=... [more]
A0A0A0KN62_CUCSA7.543e-13564.21Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
A0A0D2NVM9_GOSRA5.402e-13498.38Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2RZI8_GOSRA1.289e-13397.98Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A078JD86_BRANA1.352e-13364.20BnaC02g44810D protein OS=Brassica napus GN=BnaC02g... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
YQMA_SCHPO1.421e-1240.86Ankyrin repeat-containing protein P1E11.10 OS=Schi... [more]
ANKR1_RABIT1.482e-1238.32Ankyrin repeat domain-containing protein 1 OS=Oryc... [more]
ANKR2_MOUSE5.289e-1234.58Ankyrin repeat domain-containing protein 2 OS=Mus ... [more]
AKRP_ARATH6.827e-1245.45Ankyrin repeat domain-containing protein, chloropl... [more]
ANKE1_MOUSE6.988e-1236.00Ankyrin repeat and EF-hand domain-containing prote... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 339..353
score: 27.44
coord: 291..306
score: 37.48
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 323..352
e-value: 2.5E-4
score: 30.4
coord: 290..319
e-value: 3.5E-7
score: 39.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 290..322
score: 14.88
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 323..355
score: 12.957
IPR000582Acyl-CoA-binding protein, ACBPPRINTSPR00689ACOABINDINGPcoord: 152..170
score: 48.12
coord: 196..213
score: 37.3
coord: 175..190
score: 36.31
IPR000582Acyl-CoA-binding protein, ACBPPFAMPF00887ACBPcoord: 131..214
e-value: 3.3E-27
score: 94.3
IPR000582Acyl-CoA-binding protein, ACBPPROSITEPS51228ACB_2coord: 129..219
score: 42.478
IPR000582Acyl-CoA-binding protein, ACBPSUPERFAMILY47027Acyl-CoA binding proteincoord: 129..217
NoneNo IPR availablePFAMPF13637Ank_4coord: 292..344
e-value: 2.3E-13
score: 50.2
NoneNo IPR availablePANTHERPTHR24119FAMILY NOT NAMEDcoord: 104..374
coord: 7..83
NoneNo IPR availablePANTHERPTHR24119:SF0ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6coord: 104..374
coord: 7..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..378
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..50
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 254..364
e-value: 1.7E-32
score: 111.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 257..363
score: 32.041
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 255..367
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundleGENE3D1.20.80.10coord: 128..219
e-value: 6.8E-30
score: 102.4

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0017722 ID=g.arboreum_cottongen_reftransV1_0017722; Name=g.arboreum_cottongen_reftransV1_0017722; organism=Gossypium arboreum; type=contig; length=1847bp
GAGATTACTACACCTTTGGTTTGGTTTCTCCGGCGCCAATGTTTTCTAAA
CAATAATATACAAAATTAAAGGGAAAAAGAGGAAATTTTTATCTTCTTCA
ATTTCCGACAAGATTTATAGGGTTTTAGCTTAACTACGATGCAAAGATGC
TTCATTTCTAGTGTTTGTGTTTTTTAGGGTTGGATTTTGATTTTATGTCT
GGGTTTTGGTTGATTGATTCCATGGCTGACTGGCAACAGCTTTTGCAATC
GATTTTCTTAGGTCTTATATTCTCTTATCTTCTAGCGAAGCTAATCTCCT
TAGTCGTTTCTTTCAAAGACGATAACCTTTCGATAACCCGAGCCCGAAGC
AGCAATGTCCAGGGCTACGAGAAAATCGACGATTCGGGTTCCGGATCCGA
ACCGATTGGAAGTACTGAGCACTTGGGACTGCACAAGTCGGATTCGGTAG
TCGCAGAATTGGGAAGTATTAGGGCCGAGAGTGATGGCGATGGTGATGGC
GTGGATGATGACGACGACGACGATTGGGAAGGGGTGGAGTGTACGGAACT
GGATGATGCTTTCAGTGCGGCAACGGCGTTCGTGGCGGCTGCCGCGGCTG
ATCGGTTGTCGCAGAAGGTTCCGAACGAGGTGCAGTTGCAGCTTTACGGT
TTGTACAAGATTGCCACCGAAGGGCCTTGCACTGCTCCGCAGCCTTCCGC
TTTGAAAATGACGGCTCGTGCTAAGTGGCAAGCATGGCACAAATTGGGTG
CTATGCCTCCAGAGGATGCAATGCAGAAATACATTGATGTTGTGACAGAG
CTATATCCATCTTGGGCTGCTGGTTCAGCTATGGGCAAAGGTGGGGCTGA
TAATGCTTCAAGTAAAGATGTCAAAGGACCAATGGGACCGGTTTTCAGCT
CTTTTGTGTATGAAGAGGAATCTGAAAATGATTTGAAAATGGATGCTATC
CACACTTTTGCCAGAGAAGGAGATCTGGATAATTTGCTTAAAAGCATTGA
AAGTGGTGTTTCTGTGCATTTGCAAGACAGTGAAGGGAGGACCCCGATGC
ATTGGGCTGTAGATCGTGGCCATCTTAAAATTGCCGAAGCACTTCTTAGC
AGGAATGCTAATGTGAATGCTAAGGACAATGAAGGTCAAACCCCATTGCA
CTATGCTGTTATGTGTGAGAGGGAAGACATTGCCAAATTTCTTGTAAAAC
AAAATGCAGACAAAGATACGAAGGATAACGACGGCAACTCTCCAGTCGAC
CTGTGTGACTCAGGTTGGCCTTGGTTGCAACGTGCAGGCAAAGTGGAATG
ACCTTTGTTTTATTCCCAAGTTTGGTTTCAGTTAAAAAGTACTTGAAAAA
ATTTCTCATGGATGTATATGGGTATAAGCAACCTTTTGCACTTCTTTCCT
TAGTTATATGCTAATGTGGGGTACTCTGATGTTCATTGGCCTCACCTCCT
TAAGTACTGCTTTCTTTACCACCATAAGTAGATGGAAAAGAATTGGAAGG
TGGCTTTAGCCGGTGAAATGGAATTCTGATACCATCATTTGTTTGGATAG
AGTCTAGAGGTATGTAGCCGGACATGGCCAGAGAAGTTGGATGCTACTCT
TCAAAGGGATCCAATGCGGGCAGTGCAGTGAACCTAATTAGTTGTTTGAT
CTGATGGTAGATATGATAAACCGTAGATTCCATCACCCTAAATCTGTTCC
CATCAAACGGAGGCTCCGTCACCCTAAAAACTGATGTAATTTCACAATAT
AAACGGGCAAACTGCTTAAGATTACTTATCCTGCTTCACTAAAAAGTTTC
TACTGCCTGATGAAGATGTCATGATCAAAACTTTGCCTCTTATCTTT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR000582Acyl-CoA-binding_protein
IPR020683Ankyrin_rpt-contain_dom
IPR014352FERM/acyl-CoA-bd_prot_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0000062fatty-acyl-CoA binding