g.arboreum_cottongen_reftransV1_0017722, g.arboreum_cottongen_reftransV1_0017722 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: B9IDN1_POPTR (ACYL-COA binding family protein OS=Populus trichocarpa GN=POPTR_0015s01250g PE=4 SV=1) HSP 1 Score: 420.239 bits (1079), Expect = 1.400e-138 Identity = 245/357 (68.63%), Postives = 281/357 (78.71%), Query Frame = 3 Query: 222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKS---DSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQR 1283 MADWQ LLQSIF+GL+FSYLLAKLIS+VVSF++DNL ITR + + H H DSVVAE GS+R ES DG DDDDDDWEGVE TELD+ FSAATAFVAAAAADR+S KV +++QLQLYG YKIATEGPCT+ PSALKMTARAKWQAW KLGAMPPEDAMQKYID++TELYP+WA+GSAM K SKD KGPMGPVFS+FVYEEES +LKMDAIH FAREG+++NL+K I+ GVSV+L+DSEGRTP+HWAVDRGHL IAE L+ +NA++NAKDNEGQTPLHYA +CERE IA++LVKQNAD D KDNDG S DLC+S WP LQR Sbjct: 1 MADWQHLLQSIFIGLLFSYLLAKLISIVVSFQNDNLHITRNPKPQ-------SNDPDPAPAPAPAVHHYQHSHGDVDSVVAEQGSVRNESVSGSDGGGDDDDDDWEGVESTELDEMFSAATAFVAAAAADRVSLKVSSDLQLQLYGYYKIATEGPCTSAPPSALKMTARAKWQAWQKLGAMPPEDAMQKYIDIITELYPTWASGSAMSKDRDGVGPSKDGKGPMGPVFSTFVYEEESGTELKMDAIHAFAREGEVNNLIKCIDGGVSVNLKDSEGRTPLHWAVDRGHLNIAEVLVGKNADINAKDNEGQTPLHYAAVCEREAIAEYLVKQNADTDAKDNDGQSAHDLCESDWPCLQR 350
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A061G203_THECC (Acyl-CoA binding protein 2 isoform 3 OS=Theobroma cacao GN=TCM_015446 PE=4 SV=1) HSP 1 Score: 419.853 bits (1078), Expect = 1.453e-138 Identity = 243/302 (80.46%), Postives = 274/302 (90.73%), Query Frame = 3 Query: 222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXX-WEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAK 1124 MADWQQLLQSI +GL+FSYLLAKLISLVVSFK+DNLSI RAR+++VQ + K+D SGS S+P T+ G H +DSV+AE+GS+R ESDG D DDDDDDD WEGVECTELD+AFSAATAFVAAAAADRLSQKV +E+QLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPE+AMQKYID+VTELYP+WAAGSAM KGGA+NA+S+D +GPMGPVFSSFVYEEES N+LKMDAIH FAREG+LDNLLK IES VSV+L+DSEGRTP+HWAVDRGH KI EAL+SRNA+VNAK Sbjct: 1 MADWQQLLQSILIGLLFSYLLAKLISLVVSFKEDNLSIARARTAHVQAHNKLD-SGSESDPHVRTDFGGPHDADSVIAEVGSVRNESDGGDDDGDDDDDDDDWEGVECTELDEAFSAATAFVAAAAADRLSQKVSSEMQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEEAMQKYIDIVTELYPTWAAGSAMSKGGAENAASRDARGPMGPVFSSFVYEEESGNELKMDAIHAFAREGELDNLLKCIESDVSVNLRDSEGRTPLHWAVDRGHFKITEALVSRNADVNAK 301
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A058ZYY6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00399 PE=4 SV=1) HSP 1 Score: 419.468 bits (1077), Expect = 4.541e-138 Identity = 236/365 (64.66%), Postives = 286/365 (78.36%), Query Frame = 3 Query: 228 DWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYE---------KIDDSGSG--SEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAM-GKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRA 1286 DWQ LLQS+F+GLIFSYLLAKLISL+ +FK++ L++ RA + K SG+G +EP G+ SDSVVAE GS+R ES D D DWEGVE TELD+ FSAATAF AAAAADRLSQ+V ++ QLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAW+KLGAMPPE+AMQKYID+VTELYP+W AGS+M KG +A S + KGPMGPVFS+FV+EE + K+DAIH FAREG++DNLLK +E+GVSV+++DSEGRTP+HWAVDRGH K+ E L+S++A+VNAKD+EGQTPLHYAV+C+RE IA+FLVKQNA D KDNDGN+P D+C+S WPW++ A Sbjct: 4 DWQPLLQSVFIGLIFSYLLAKLISLLFTFKEEGLTVARAPAPAPAPAPAPAPAAAAAKRPGSGAGDAAEPDGADGGGESRDSDSVVAEHGSVRNESAAGTDDDGGGSDSDWEGVESTELDEIFSAATAFAAAAAADRLSQRVSSDAQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWNKLGAMPPEEAMQKYIDIVTELYPTWIAGSSMKSKGSHGDAPSTEAKGPMGPVFSTFVHEEPG-TESKLDAIHAFAREGEIDNLLKCVEAGVSVNVKDSEGRTPLHWAVDRGHSKVVEMLVSKDADVNAKDDEGQTPLHYAVVCDREGIAEFLVKQNASTDVKDNDGNTPHDVCESDWPWMRSA 367
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: E0CV74_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g01570 PE=4 SV=1) HSP 1 Score: 416.387 bits (1069), Expect = 3.200e-137 Identity = 237/358 (66.20%), Postives = 276/358 (77.09%), Query Frame = 3 Query: 228 DWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQG-YEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKG--GADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292 +WQQL+QS+F GL+FSYL AKLIS+V+SF+D+NLS+TR QG DD +GS+ G +E S+ AE G DDDDDWEGVE TELD+ FSAATAFVAA AADRLSQKV N+VQLQLYGLYKIATEGPC+APQPSALKMTARAKWQAW KLGAMPPE+AMQKYI +VTELYP+WA GS G +A S D KGPMGPVFS+FVYEEE +LKMDAIH FAREG++DNLLK I++GVSV L+DSEGRTP+HWAVDRGHL + E LL+ A+VNAKD+EGQ+PLHYAV+CERE IA+FLVKQNAD + DNDG SP +LC+S WPW+Q A K Sbjct: 4 EWQQLIQSVFFGLVFSYLFAKLISIVISFRDENLSLTRDSKPESQGGAASADDDSAGSQKSGGSEGEE------------SLLAEKGSGSSGSLLDDDDDWEGVESTELDEEFSAATAFVAATAADRLSQKVSNDVQLQLYGLYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIAIVTELYPTWATGSTNKSKDEGGSSAPSGDAKGPMGPVFSTFVYEEECGTELKMDAIHAFAREGEVDNLLKCIDNGVSVDLKDSEGRTPLHWAVDRGHLNLTELLLNHGADVNAKDHEGQSPLHYAVVCEREAIAEFLVKQNADINAMDNDGASPFELCESNWPWMQGAAK 349
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: I1KAV2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 413.69 bits (1062), Expect = 3.901e-136 Identity = 236/360 (65.56%), Postives = 285/360 (79.17%), Query Frame = 3 Query: 222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGY--EKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAM-GKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292 MA+WQ LLQSI +GLIFSYLLAKLIS+VVSFKDDNL++TRA ++ E+ +D+ + + S + +SVVAE GS+R +SDGD D WEGVE TELD+AFSAATAFVAAAAADRLSQKV ++VQLQLYGLYKIATEGPC+ PQPS LKMTARAKWQAW KLGAMPPEDAMQKYID+VTE+YP+W GS++ K G + KGPMGPVFS+FVYEEE +D +M+AIH FAREGD+ NLLK IE+GVS++L+DSEGRTP+HWAVDRGHL + E L+ +NA+VNAKDN+GQTPLHYAV CERE IA++LVK NAD +KDNDG+SP D+C+S WP +Q G+ Sbjct: 1 MAEWQSLLQSILVGLIFSYLLAKLISIVVSFKDDNLTVTRASAAETTATRAEQFEDALKRDDAVSSDARP--FEEESVVAEHGSVRIDSDGDYDDD-------WEGVESTELDEAFSAATAFVAAAAADRLSQKVSSDVQLQLYGLYKIATEGPCSTPQPSPLKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTEIYPTWLDGSSLRNKSGDSGGHGSEAKGPMGPVFSTFVYEEEYGSDSQMEAIHGFAREGDMANLLKCIENGVSMNLKDSEGRTPLHWAVDRGHLNVTELLVGKNADVNAKDNDGQTPLHYAVTCEREAIAEYLVKHNADIYSKDNDGSSPRDICESNWPCMQHVGE 351
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: V4MGU4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025574mg PE=4 SV=1) HSP 1 Score: 410.994 bits (1055), Expect = 4.829e-135 Identity = 234/359 (65.18%), Postives = 282/359 (78.55%), Query Frame = 3 Query: 222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQ-GYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSA-MGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292 M DW L QS+ LGLIFSYLLAKLIS+VV+FK+DNLS+TR ++ E +D S +G G ++DS+VAE GS RA+S DDD WEGVE TELD+AFSAAT FV AAADRLSQKVP++VQ QLYGLYKIATEGPCTAPQPSALKMTARAKWQAW KLGAMPPE+AM+KYI++VT+LYP+W G G G D+A+S + G MGPVFSS VYEEESEN+LK+DAIH FAREG+++NLLKSIESG+ V+ +DSEGRTP+HWA+DRGH IA+ L+ A+VNAKDNEGQTPLHYAV+C+RE IA+FLVKQ A+ +KDNDGNSP+DLC+S WPW++ + K Sbjct: 1 MGDWAPLAQSVILGLIFSYLLAKLISIVVTFKEDNLSLTRHPEPELEIKPEVVDSRRIDSSTVG---FGGGGEADSLVAEQGSSRADSVAGDSEEDDD----WEGVESTELDEAFSAATLFVTTAAADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIEIVTQLYPTWLDGGVRAGSRGGDDAAS-NSGGTMGPVFSSLVYEEESENELKIDAIHAFAREGEIENLLKSIESGIPVNAKDSEGRTPLHWAIDRGHFNIAKVLVDNKADVNAKDNEGQTPLHYAVVCDRESIAEFLVKQKANTASKDNDGNSPLDLCESDWPWIRDSEK 351
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A0A0KN62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139300 PE=4 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 7.543e-135 Identity = 235/366 (64.21%), Postives = 288/366 (78.69%), Query Frame = 3 Query: 222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNV----QGYEKID----DSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAG-SAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292 MA+WQ LQ++F+GLIFSYL+AKLIS+VVSFK+DNLS++RA S+ + +G K D GSGS G H++DSV+AE GS+R +S G D DDD WEGVE TELD+ FSAATAFVAA+AADRLS KV NEVQLQLYG YKIATEGPC+ PQPSALKMTARAKWQAW KLGAMPPE+AMQKYID+VTEL+PSW AG S K G +A SKD +GPMGPVFS+FVYEE N+L+++ IH FAREG+L+NLLK IE+GVSV+++DSEGRTP+HWAVDRGH + E L+SRNA+++ KD +GQTPLHYAV+C+RE IA++LVK NA+ KDN+G SP D+C+S WP++ A K Sbjct: 1 MAEWQDFLQTLFIGLIFSYLVAKLISIVVSFKEDNLSLSRATSTPIPQSNEGVSKTKPIETDIGSGSGDFGFA-----HEADSVIAEHGSVRNDSIGGSDTDDDD----WEGVESTELDELFSAATAFVAASAADRLSPKVSNEVQLQLYGYYKIATEGPCSTPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELFPSWVAGASGKSKDGNADARSKDSRGPMGPVFSTFVYEETG-NELELEDIHGFAREGELENLLKCIENGVSVNIKDSEGRTPLHWAVDRGHSNVVEVLVSRNADIDVKDVDGQTPLHYAVVCDREGIAEYLVKNNANVSEKDNEGKSPCDICESNWPFMVSAKK 356
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A0D2NVM9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G202200 PE=4 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 5.402e-134 Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 3 Query: 195 MSGFWLIDSMADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDL 935 MSGFWLIDSMADWQQLLQSI LGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGS+PIGSTEHLGLHKSDSVVAELGSIRAESDGDGDGVDDDDDD WEGVECTELDDAFSAATAFVAAAAADRLSQKVPNEVQLQLYGLYK+ATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPVFSSFVYEEESENDL Sbjct: 1 MSGFWLIDSMADWQQLLQSIILGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSDPIGSTEHLGLHKSDSVVAELGSIRAESDGDGDGVDDDDDD-WEGVECTELDDAFSAATAFVAAAAADRLSQKVPNEVQLQLYGLYKVATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPVFSSFVYEEESENDL 246
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A0D2RZI8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G202200 PE=4 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 1.289e-133 Identity = 242/247 (97.98%), Postives = 244/247 (98.79%), Query Frame = 3 Query: 195 MSGFWLIDSMADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDL 935 MSGFWLIDSMADWQQLLQSI LGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGS+PIGSTEHLGLHKSDSVVAELGSIRAESDGDGDGVDDDDDD WEGVECTELDDAFSAATAFVAAAAADRLSQKVPNEVQLQLYGLYK+ATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPVFSSFVYEEESEND Sbjct: 1 MSGFWLIDSMADWQQLLQSIILGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSDPIGSTEHLGLHKSDSVVAELGSIRAESDGDGDGVDDDDDD-WEGVECTELDDAFSAATAFVAAAAADRLSQKVPNEVQLQLYGLYKVATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPVFSSFVYEEESENDF 246
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A078JD86_BRANA (BnaC02g44810D protein OS=Brassica napus GN=BnaC02g44810D PE=4 SV=1) HSP 1 Score: 406.757 bits (1044), Expect = 1.352e-133 Identity = 226/352 (64.20%), Postives = 277/352 (78.69%), Query Frame = 3 Query: 228 DWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQG-YEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQ 1280 DW L QS+ GLIF+YLLAKLIS++V+FKDDNLS+TR+ + + Y + DS +G ++DS+VAE GS+R + D D D WEGVE TELD+AFSAATAFVAAAA+DRLSQKV NE+QLQLYGLYKIATEG CTAPQPSALKMTARAKWQAWHKLGAMP E+AM+KYID+VT LYP+W G + G + +A+ + + PMGPVFSS VYEEESENDLK+DA+H FAREG+++NLLK IESG+ V+ +DSEGRTP+HWA+DRGHL +A+AL+ +NA+VNAKDNEGQT LHYAV+CERE +A+FLVKQ AD KD DGNSP+DLC+S W W++ Sbjct: 4 DWYHLAQSLIFGLIFAYLLAKLISILVAFKDDNLSLTRSHDAQSENDYHRKVDSSTG-------------ETDSLVAEQGSLRGDEDDDDD---------WEGVESTELDEAFSAATAFVAAAASDRLSQKVSNELQLQLYGLYKIATEGACTAPQPSALKMTARAKWQAWHKLGAMPAEEAMEKYIDLVTHLYPAWVEGGSKGSNRSGDAAGSNSRAPMGPVFSSLVYEEESENDLKIDAVHAFAREGEVENLLKCIESGIPVNARDSEGRTPLHWAIDRGHLNVAKALVDKNADVNAKDNEGQTALHYAVVCEREALAEFLVKQKADTSIKDEDGNSPLDLCESEWSWMR 333
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBP2_ARATH (Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=ACBP2 PE=1 SV=1) HSP 1 Score: 409.068 bits (1050), Expect = 2.828e-136 Identity = 233/358 (65.08%), Postives = 286/358 (79.89%), Query Frame = 3 Query: 222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWA-AGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292 M DW QL QS+ LGLIFSYLLAKLIS+VV+FK+DNLS+TR + +I G S + S+ ++DS+VAE GS R++S D +DDD + GVE TELD+AFSAAT FV AAADRLSQKVP++VQ QLYGLYKIATEGPCTAPQPSALKMTARAKWQAW KLGAMPPE+AM+KYI++VT+LYP+W G G G D+A+S + +G MGPVFSS VY+EESEN+LK+DAIH FAREG+++NLLKSIESG+ V+ +DSEGRTP+HWA+DRGHL IA+ L+ +NA+VNAKDNEGQTPLHYAV+C+RE IA+FLVKQNA+ KD DGNSP+DLC+S WPW++ + K Sbjct: 1 MGDWAQLAQSVILGLIFSYLLAKLISIVVTFKEDNLSLTRHPE---ESQLEIKPEGVDSRRLDSSCGGFGGEADSLVAEQGSSRSDSVAGDDSEEDDDWE---GVESTELDEAFSAATLFVTTAAADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIEIVTQLYPTWLDGGVKAGSRGGDDAAS-NSRGTMGPVFSSLVYDEESENELKIDAIHGFAREGEVENLLKSIESGIPVNARDSEGRTPLHWAIDRGHLNIAKVLVDKNADVNAKDNEGQTPLHYAVVCDREAIAEFLVKQNANTAAKDEDGNSPLDLCESDWPWIRDSAK 351
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBP1_ARATH (Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana GN=ACBP1 PE=1 SV=2) HSP 1 Score: 399.438 bits (1025), Expect = 1.096e-132 Identity = 225/353 (63.74%), Postives = 275/353 (77.90%), Query Frame = 3 Query: 222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQ 1280 MADW QL QSI GLIF+YLLAKLIS++++FKD+NLS+TR ++ + YE + + + G T DS++AE GS+R + D D + GVE TELD+AFSAATAFVAAAA+DRLSQKV NE+QLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAW KLGAMPPE+AM+KYID+VT+LYP+W G G S + GPMGPVFSS VYEEES+N+LK+DAIH FAREG+++NLLK IE+G+ V+ +DSEGRTP+HWA+DRGHL +AEAL+ +NA+VNAKDNEGQT LHYAV+CERE +A+FLVKQ AD KD DGNSP+DLC+S W W++ Sbjct: 1 MADWYQLAQSIIFGLIFAYLLAKLISILLAFKDENLSLTRNHTTQSE-YENLRKVETLTGISGET--------DSLIAEQGSLRGDEDESDDDDWE-------GVESTELDEAFSAATAFVAAAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIDLVTQLYPAWVEG-----GSKRRNRSGEAAGPMGPVFSSLVYEEESDNELKIDAIHAFAREGEVENLLKCIENGIPVNARDSEGRTPLHWAIDRGHLNVAEALVDKNADVNAKDNEGQTSLHYAVVCEREALAEFLVKQKADTTIKDEDGNSPLDLCESEWSWMR 332
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_BOVIN (Acyl-CoA-binding domain-containing protein 6 OS=Bos taurus GN=ACBD6 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.821e-38 Identity = 83/217 (38.25%), Postives = 113/217 (52.07%), Query Frame = 3 Query: 606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIES-GVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL 1253 L Q E L LY YK G C P+PS + KW+AW LG P AMQ+YI VV +L PSW S KG N GP+ E + D I + RE ++D++ K I++ + V+++D EGRT +HWA DRGH ++ LL A++N +DNEGQT LHYA CE DI + L++ AD +D DG P ++ Sbjct: 56 LVQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKLDPSWNPQSPEKKGKEANTG---FGGPVVSSLYHEEIIREEDKD-----IFDYCRENNIDHITKVIKTKNMDVNMKDEEGRTLLHWACDRGHKELVTVLLQYRADINCQDNEGQTALHYAAACEFLDIVELLLQSGADPTLRDQDGCLPEEV 264
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_HUMAN (Acyl-CoA-binding domain-containing protein 6 OS=Homo sapiens GN=ACBD6 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.155e-37 Identity = 91/229 (39.74%), Postives = 121/229 (52.84%), Query Frame = 3 Query: 606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIES-GVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL--CDSGWPWLQR 1283 L Q E L LY YK G C P+PS + KW+AW LG P AMQ+YI VV +L P W KG N G GPV SS +EE + K I + RE ++D++ K+I+S V V+++D EGR +HWA DRGH ++ LL A++N +DNEGQT LHYA CE DI + L++ AD +D DG P ++ C + LQR Sbjct: 56 LIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKLDPGWNPQIPEKKGKEANT------GFGGPVISSLYHEETIREEDK--NIFDYCRENNIDHITKAIKSKNVDVNVKDEEGRALLHWACDRGHKELVTVLLQHRADINCQDNEGQTALHYASACEFLDIVELLLQSGADPTLRDQDGCLPEEVTGCKTVSLVLQR 276
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_RAT (Acyl-CoA-binding domain-containing protein 6 OS=Rattus norvegicus GN=Acbd6 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.765e-36 Identity = 91/234 (38.89%), Postives = 124/234 (52.99%), Query Frame = 3 Query: 606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIES-GVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL--CDSGWPWLQ--RAGK 1292 L Q E L LY YK G C P+P+ + KW+AW LG P AMQ+YI V +L P W + KG ++ G GPV SS +EE + K I + RE ++D++ K+I+S V V++ D EGR +HWA DRGH ++ + LL A +N +DNEGQT LHYA CE DI + L++ AD +D DG P ++ C + LQ RAGK Sbjct: 56 LVQVASREQLLYLYARYKQVKVGNCNIPKPNFFDFEGKQKWEAWKALGDSSPSQAMQEYIAAVKKLDPGWNPQVSEKKGKEGSS------GFGGPVVSSLYHEETIREEDK--NIFDYCRENNIDHITKAIKSKTVDVNMTDEEGRALLHWACDRGHKELVKVLLQCEAGINCQDNEGQTALHYAAACEFSDIVELLLQSGADPTLRDQDGCLPEEVTGCKAVSLVLQLHRAGK 281
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_MOUSE (Acyl-CoA-binding domain-containing protein 6 OS=Mus musculus GN=Acbd6 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.725e-35 Identity = 86/229 (37.55%), Postives = 121/229 (52.84%), Query Frame = 3 Query: 606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVS-VHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL--CDSGWPWLQR 1283 L Q E L LY +K G C P+P+ + KW+AW LG P AMQ+YI V +L P W + KG ++ G GPV SS +EE + K I + RE ++D++ K+I+S + V++ D EGR +HWA DRGH ++ + LL A +N +DNEGQT LHYA CE DI + L++ AD +D DG P ++ C + LQR Sbjct: 56 LVQVASREQLLYLYARFKQVKVGNCNTPKPNFFDFEGKQKWEAWKALGDSSPSQAMQEYIAAVKKLDPGWNPQVSEKKGKEGSS------GFGGPVVSSLYHEETIREEDK--NIFDYCRENNIDHIAKAIKSKAADVNMTDEEGRALLHWACDRGHKELVKVLLQYEAGINCQDNEGQTALHYAAACEFLDIVELLLQSGADPTLRDQDGCLPEEVTGCKAVSLLLQR 276
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_DANRE (Acyl-CoA-binding domain-containing protein 6 OS=Danio rerio GN=acbd6 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 8.090e-34 Identity = 81/220 (36.82%), Postives = 116/220 (52.73%), Query Frame = 3 Query: 606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIES-GVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDS 1262 L Q E L LY +K G C +P + KW AW +LG M E AMQ+Y+ V L P + S+ +GG G GP SS EE+ + K I + RE +++++ K+I S V V+ +D EGR +HWA DRGH + LL NA++N++D+EGQT LHYA CE +I + L+K AD KD +G+ P ++ +S Sbjct: 74 LVQTASREQLLYLYARFKQVKVGKCNTSKPGFFDFEGQRKWSAWKQLGDMSAEQAMQEYVTCVHALDPEGSQKSSERRGGEKRT------GFGGPAVSSLYQEEKIREEDKN--IFDYCRENNIEHVSKAISSKTVDVNTRDEEGRALLHWACDRGHKDLVSLLLQNNADINSQDDEGQTALHYASACEFAEIVELLLKAGADPSIKDQEGSLPEEVTES 285
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_XENTR (Acyl-CoA-binding domain-containing protein 6 OS=Xenopus tropicalis GN=acbd6 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.731e-32 Identity = 77/211 (36.49%), Postives = 109/211 (51.66%), Query Frame = 3 Query: 636 LQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMG-PXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESG-VSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDS 1262 L LY YK G C P+P + KW+AW LG + AM +YI+ V +L P W+ A K+ K G PV S +E+ + D I + RE ++ + ++ +G + V++ D EGR +HWA DRGH ++ LL NA++N +D+EGQTPLHYA CE DI L+ AD DNDG P ++ DS Sbjct: 56 LFLYARYKQVKVGRCNTPKPGFFDYEGKKKWEAWKALGDYSCQQAMNEYIETVKKLDPDWSPQ-------ALEEPHKEPKTTFGGPVVSCLYKVQETLREEDKD-IFDYCRENNISRVSHALSTGAIDVNVADDEGRCLLHWACDRGHTQLVSVLLFHNAHINMQDSEGQTPLHYASACEFPDIVDLLLDHGADPSLVDNDGFQPHEVTDS 258
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_XENLA (Acyl-CoA-binding domain-containing protein 6 OS=Xenopus laevis GN=acbd6 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 7.224e-32 Identity = 77/214 (35.98%), Postives = 109/214 (50.93%), Query Frame = 3 Query: 636 LQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPM----GPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESG-VSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDS 1262 L LY YK G C P+P + KW+AW LG + AM +YI+ V +L P W+ A + K P GPV S +E+ + D I + RE + + ++ +G V V++ D EGR+ +HWA DRGH ++ +L NA++N +D+EGQTPLHYA CE DI L+ AD DNDG P ++ DS Sbjct: 56 LYLYARYKQVKVGRCNTPKPGFFDYEGKKKWEAWKALGDYSHQQAMTEYIETVKKLDPDWSP----------QALEEPYKEPKTTFGGPVVSCLYKVQETLREEDKD-IFDYCRENNHSRVSHALSTGSVDVNVADDEGRSLLHWACDRGHTQLVSVILFHNAHINMQDSEGQTPLHYASACEFPDIVDLLLDHGADPSLVDNDGFQPHEVTDS 258
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_DICDI (Acyl-CoA-binding domain-containing protein 6 homolog OS=Dictyostelium discoideum GN=acbd6 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.994e-25 Identity = 79/252 (31.35%), Postives = 120/252 (47.62%), Query Frame = 3 Query: 618 VPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGAD--------------------------NASSKDVKGP----MGPXXXXXX-----XXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSV-HLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNA-DKDTKDNDGNSPVDLCDS 1262 + NE QL LY YK AT G C P ++KW +W+ L + AM YI +V L P W + + + + +++ P MGPV S F E+ E + K D + + D++ + K IE+ ++ + D +GRT + WA DRG+ +IA+ L+ +NVN +D EG TPLHYAV+C++ +I K L+ Q++ DK KDN + P D DS Sbjct: 27 IKNEEQLYLYCNYKQATIGDCNTKAPPFYDYIGKSKWNSWNSLKGVEKIVAMNSYISLVNALSPGWDSNIKVERATQSVFLNDEEFKELEKKEKEEKEELKKLEEENGGEIEKPKSKWMGPVLSKFSLVDDETLEKLEKNTKQD-LGYWVSVNDIERVKKEIENDKNIINEVDEDGRTALIWACDRGYFEIAKLLIENGSNVNVQDGEGMTPLHYAVVCDQFEICKLLLSQSSIDKSIKDNSDSIPSDFIDS 277 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to top
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0017722 ID=g.arboreum_cottongen_reftransV1_0017722; Name=g.arboreum_cottongen_reftransV1_0017722; organism=Gossypium arboreum; type=contig; length=1847bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|