g.arboreum_cottongen_reftransV1_0017722, g.arboreum_cottongen_reftransV1_0017722 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0017722
Unique Name	g.arboreum_cottongen_reftransV1_0017722
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	1847

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr11	chromosome	g.arboreum_cottongen_reftransV1_0017722:1..1847 . Chr11:63024917..63028626 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: B9IDN1_POPTR (ACYL-COA binding family protein OS=Populus trichocarpa GN=POPTR_0015s01250g PE=4 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 1.400e-138
Identity = 245/357 (68.63%), Postives = 281/357 (78.71%), Query Frame = 3

Query:  222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKS---DSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQR 1283
            MADWQ LLQSIF+GL+FSYLLAKLIS+VVSF++DNL ITR             +    +       H   H     DSVVAE GS+R ES    DG  DDDDDDWEGVE TELD+ FSAATAFVAAAAADR+S KV +++QLQLYG YKIATEGPCT+  PSALKMTARAKWQAW KLGAMPPEDAMQKYID++TELYP+WA+GSAM K       SKD KGPMGPVFS+FVYEEES  +LKMDAIH FAREG+++NL+K I+ GVSV+L+DSEGRTP+HWAVDRGHL IAE L+ +NA++NAKDNEGQTPLHYA +CERE IA++LVKQNAD D KDNDG S  DLC+S WP LQR
Sbjct:    1 MADWQHLLQSIFIGLLFSYLLAKLISIVVSFQNDNLHITRNPKPQ-------SNDPDPAPAPAPAVHHYQHSHGDVDSVVAEQGSVRNESVSGSDGGGDDDDDDWEGVESTELDEMFSAATAFVAAAAADRVSLKVSSDLQLQLYGYYKIATEGPCTSAPPSALKMTARAKWQAWQKLGAMPPEDAMQKYIDIITELYPTWASGSAMSKDRDGVGPSKDGKGPMGPVFSTFVYEEESGTELKMDAIHAFAREGEVNNLIKCIDGGVSVNLKDSEGRTPLHWAVDRGHLNIAEVLVGKNADINAKDNEGQTPLHYAAVCEREAIAEYLVKQNADTDAKDNDGQSAHDLCESDWPCLQR 350

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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A061G203_THECC (Acyl-CoA binding protein 2 isoform 3 OS=Theobroma cacao GN=TCM_015446 PE=4 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 1.453e-138
Identity = 243/302 (80.46%), Postives = 274/302 (90.73%), Query Frame = 3

Query:  222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXX-WEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAK 1124
            MADWQQLLQSI +GL+FSYLLAKLISLVVSFK+DNLSI RAR+++VQ + K+D SGS S+P   T+  G H +DSV+AE+GS+R ESDG  D  DDDDDDD WEGVECTELD+AFSAATAFVAAAAADRLSQKV +E+QLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPE+AMQKYID+VTELYP+WAAGSAM KGGA+NA+S+D +GPMGPVFSSFVYEEES N+LKMDAIH FAREG+LDNLLK IES VSV+L+DSEGRTP+HWAVDRGH KI EAL+SRNA+VNAK
Sbjct:    1 MADWQQLLQSILIGLLFSYLLAKLISLVVSFKEDNLSIARARTAHVQAHNKLD-SGSESDPHVRTDFGGPHDADSVIAEVGSVRNESDGGDDDGDDDDDDDDWEGVECTELDEAFSAATAFVAAAAADRLSQKVSSEMQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEEAMQKYIDIVTELYPTWAAGSAMSKGGAENAASRDARGPMGPVFSSFVYEEESGNELKMDAIHAFAREGELDNLLKCIESDVSVNLRDSEGRTPLHWAVDRGHFKITEALVSRNADVNAK 301

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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A058ZYY6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00399 PE=4 SV=1)

HSP 1 Score: 419.468 bits (1077), Expect = 4.541e-138
Identity = 236/365 (64.66%), Postives = 286/365 (78.36%), Query Frame = 3

Query:  228 DWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYE---------KIDDSGSG--SEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAM-GKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRA 1286
            DWQ LLQS+F+GLIFSYLLAKLISL+ +FK++ L++ RA +                K   SG+G  +EP G+        SDSVVAE GS+R ES    D      D DWEGVE TELD+ FSAATAF AAAAADRLSQ+V ++ QLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAW+KLGAMPPE+AMQKYID+VTELYP+W AGS+M  KG   +A S + KGPMGPVFS+FV+EE    + K+DAIH FAREG++DNLLK +E+GVSV+++DSEGRTP+HWAVDRGH K+ E L+S++A+VNAKD+EGQTPLHYAV+C+RE IA+FLVKQNA  D KDNDGN+P D+C+S WPW++ A
Sbjct:    4 DWQPLLQSVFIGLIFSYLLAKLISLLFTFKEEGLTVARAPAPAPAPAPAPAPAAAAAKRPGSGAGDAAEPDGADGGGESRDSDSVVAEHGSVRNESAAGTDDDGGGSDSDWEGVESTELDEIFSAATAFAAAAAADRLSQRVSSDAQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWNKLGAMPPEEAMQKYIDIVTELYPTWIAGSSMKSKGSHGDAPSTEAKGPMGPVFSTFVHEEPG-TESKLDAIHAFAREGEIDNLLKCVEAGVSVNVKDSEGRTPLHWAVDRGHSKVVEMLVSKDADVNAKDDEGQTPLHYAVVCDREGIAEFLVKQNASTDVKDNDGNTPHDVCESDWPWMRSA 367

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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: E0CV74_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g01570 PE=4 SV=1)

HSP 1 Score: 416.387 bits (1069), Expect = 3.200e-137
Identity = 237/358 (66.20%), Postives = 276/358 (77.09%), Query Frame = 3

Query:  228 DWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQG-YEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKG--GADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292
            +WQQL+QS+F GL+FSYL AKLIS+V+SF+D+NLS+TR      QG     DD  +GS+  G +E               S+ AE      G   DDDDDWEGVE TELD+ FSAATAFVAA AADRLSQKV N+VQLQLYGLYKIATEGPC+APQPSALKMTARAKWQAW KLGAMPPE+AMQKYI +VTELYP+WA GS       G  +A S D KGPMGPVFS+FVYEEE   +LKMDAIH FAREG++DNLLK I++GVSV L+DSEGRTP+HWAVDRGHL + E LL+  A+VNAKD+EGQ+PLHYAV+CERE IA+FLVKQNAD +  DNDG SP +LC+S WPW+Q A K
Sbjct:    4 EWQQLIQSVFFGLVFSYLFAKLISIVISFRDENLSLTRDSKPESQGGAASADDDSAGSQKSGGSEGEE------------SLLAEKGSGSSGSLLDDDDDWEGVESTELDEEFSAATAFVAATAADRLSQKVSNDVQLQLYGLYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIAIVTELYPTWATGSTNKSKDEGGSSAPSGDAKGPMGPVFSTFVYEEECGTELKMDAIHAFAREGEVDNLLKCIDNGVSVDLKDSEGRTPLHWAVDRGHLNLTELLLNHGADVNAKDHEGQSPLHYAVVCEREAIAEFLVKQNADINAMDNDGASPFELCESNWPWMQGAAK 349

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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: I1KAV2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 413.69 bits (1062), Expect = 3.901e-136
Identity = 236/360 (65.56%), Postives = 285/360 (79.17%), Query Frame = 3

Query:  222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGY--EKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAM-GKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292
            MA+WQ LLQSI +GLIFSYLLAKLIS+VVSFKDDNL++TRA ++       E+ +D+    + + S       + +SVVAE GS+R +SDGD D         WEGVE TELD+AFSAATAFVAAAAADRLSQKV ++VQLQLYGLYKIATEGPC+ PQPS LKMTARAKWQAW KLGAMPPEDAMQKYID+VTE+YP+W  GS++  K G       + KGPMGPVFS+FVYEEE  +D +M+AIH FAREGD+ NLLK IE+GVS++L+DSEGRTP+HWAVDRGHL + E L+ +NA+VNAKDN+GQTPLHYAV CERE IA++LVK NAD  +KDNDG+SP D+C+S WP +Q  G+
Sbjct:    1 MAEWQSLLQSILVGLIFSYLLAKLISIVVSFKDDNLTVTRASAAETTATRAEQFEDALKRDDAVSSDARP--FEEESVVAEHGSVRIDSDGDYDDD-------WEGVESTELDEAFSAATAFVAAAAADRLSQKVSSDVQLQLYGLYKIATEGPCSTPQPSPLKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTEIYPTWLDGSSLRNKSGDSGGHGSEAKGPMGPVFSTFVYEEEYGSDSQMEAIHGFAREGDMANLLKCIENGVSMNLKDSEGRTPLHWAVDRGHLNVTELLVGKNADVNAKDNDGQTPLHYAVTCEREAIAEYLVKHNADIYSKDNDGSSPRDICESNWPCMQHVGE 351

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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: V4MGU4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025574mg PE=4 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 4.829e-135
Identity = 234/359 (65.18%), Postives = 282/359 (78.55%), Query Frame = 3

Query:  222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQ-GYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSA-MGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292
            M DW  L QS+ LGLIFSYLLAKLIS+VV+FK+DNLS+TR     ++   E +D     S  +G     G  ++DS+VAE GS RA+S       DDD    WEGVE TELD+AFSAAT FV  AAADRLSQKVP++VQ QLYGLYKIATEGPCTAPQPSALKMTARAKWQAW KLGAMPPE+AM+KYI++VT+LYP+W  G    G  G D+A+S +  G MGPVFSS VYEEESEN+LK+DAIH FAREG+++NLLKSIESG+ V+ +DSEGRTP+HWA+DRGH  IA+ L+   A+VNAKDNEGQTPLHYAV+C+RE IA+FLVKQ A+  +KDNDGNSP+DLC+S WPW++ + K
Sbjct:    1 MGDWAPLAQSVILGLIFSYLLAKLISIVVTFKEDNLSLTRHPEPELEIKPEVVDSRRIDSSTVG---FGGGGEADSLVAEQGSSRADSVAGDSEEDDD----WEGVESTELDEAFSAATLFVTTAAADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIEIVTQLYPTWLDGGVRAGSRGGDDAAS-NSGGTMGPVFSSLVYEEESENELKIDAIHAFAREGEIENLLKSIESGIPVNAKDSEGRTPLHWAIDRGHFNIAKVLVDNKADVNAKDNEGQTPLHYAVVCDRESIAEFLVKQKANTASKDNDGNSPLDLCESDWPWIRDSEK 351

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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A0A0KN62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139300 PE=4 SV=1)

HSP 1 Score: 410.609 bits (1054), Expect = 7.543e-135
Identity = 235/366 (64.21%), Postives = 288/366 (78.69%), Query Frame = 3

Query:  222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNV----QGYEKID----DSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAG-SAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292
            MA+WQ  LQ++F+GLIFSYL+AKLIS+VVSFK+DNLS++RA S+ +    +G  K      D GSGS   G       H++DSV+AE GS+R +S G  D  DDD    WEGVE TELD+ FSAATAFVAA+AADRLS KV NEVQLQLYG YKIATEGPC+ PQPSALKMTARAKWQAW KLGAMPPE+AMQKYID+VTEL+PSW AG S   K G  +A SKD +GPMGPVFS+FVYEE   N+L+++ IH FAREG+L+NLLK IE+GVSV+++DSEGRTP+HWAVDRGH  + E L+SRNA+++ KD +GQTPLHYAV+C+RE IA++LVK NA+   KDN+G SP D+C+S WP++  A K
Sbjct:    1 MAEWQDFLQTLFIGLIFSYLVAKLISIVVSFKEDNLSLSRATSTPIPQSNEGVSKTKPIETDIGSGSGDFGFA-----HEADSVIAEHGSVRNDSIGGSDTDDDD----WEGVESTELDELFSAATAFVAASAADRLSPKVSNEVQLQLYGYYKIATEGPCSTPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELFPSWVAGASGKSKDGNADARSKDSRGPMGPVFSTFVYEETG-NELELEDIHGFAREGELENLLKCIENGVSVNIKDSEGRTPLHWAVDRGHSNVVEVLVSRNADIDVKDVDGQTPLHYAVVCDREGIAEYLVKNNANVSEKDNEGKSPCDICESNWPFMVSAKK 356

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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A0D2NVM9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G202200 PE=4 SV=1)

HSP 1 Score: 404.06 bits (1037), Expect = 5.402e-134
Identity = 243/247 (98.38%), Postives = 245/247 (99.19%), Query Frame = 3

Query:  195 MSGFWLIDSMADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDL 935
            MSGFWLIDSMADWQQLLQSI LGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGS+PIGSTEHLGLHKSDSVVAELGSIRAESDGDGDGVDDDDDD WEGVECTELDDAFSAATAFVAAAAADRLSQKVPNEVQLQLYGLYK+ATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPVFSSFVYEEESENDL
Sbjct:    1 MSGFWLIDSMADWQQLLQSIILGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSDPIGSTEHLGLHKSDSVVAELGSIRAESDGDGDGVDDDDDD-WEGVECTELDDAFSAATAFVAAAAADRLSQKVPNEVQLQLYGLYKVATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPVFSSFVYEEESENDL 246

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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A0D2RZI8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G202200 PE=4 SV=1)

HSP 1 Score: 404.06 bits (1037), Expect = 1.289e-133
Identity = 242/247 (97.98%), Postives = 244/247 (98.79%), Query Frame = 3

Query:  195 MSGFWLIDSMADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDL 935
            MSGFWLIDSMADWQQLLQSI LGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGS+PIGSTEHLGLHKSDSVVAELGSIRAESDGDGDGVDDDDDD WEGVECTELDDAFSAATAFVAAAAADRLSQKVPNEVQLQLYGLYK+ATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPVFSSFVYEEESEND 
Sbjct:    1 MSGFWLIDSMADWQQLLQSIILGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSDPIGSTEHLGLHKSDSVVAELGSIRAESDGDGDGVDDDDDD-WEGVECTELDDAFSAATAFVAAAAADRLSQKVPNEVQLQLYGLYKVATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPVFSSFVYEEESENDF 246

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A078JD86_BRANA (BnaC02g44810D protein OS=Brassica napus GN=BnaC02g44810D PE=4 SV=1)

HSP 1 Score: 406.757 bits (1044), Expect = 1.352e-133
Identity = 226/352 (64.20%), Postives = 277/352 (78.69%), Query Frame = 3

Query:  228 DWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQG-YEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQ 1280
            DW  L QS+  GLIF+YLLAKLIS++V+FKDDNLS+TR+  +  +  Y +  DS +G             ++DS+VAE GS+R + D D D         WEGVE TELD+AFSAATAFVAAAA+DRLSQKV NE+QLQLYGLYKIATEG CTAPQPSALKMTARAKWQAWHKLGAMP E+AM+KYID+VT LYP+W  G + G   + +A+  + + PMGPVFSS VYEEESENDLK+DA+H FAREG+++NLLK IESG+ V+ +DSEGRTP+HWA+DRGHL +A+AL+ +NA+VNAKDNEGQT LHYAV+CERE +A+FLVKQ AD   KD DGNSP+DLC+S W W++
Sbjct:    4 DWYHLAQSLIFGLIFAYLLAKLISILVAFKDDNLSLTRSHDAQSENDYHRKVDSSTG-------------ETDSLVAEQGSLRGDEDDDDD---------WEGVESTELDEAFSAATAFVAAAASDRLSQKVSNELQLQLYGLYKIATEGACTAPQPSALKMTARAKWQAWHKLGAMPAEEAMEKYIDLVTHLYPAWVEGGSKGSNRSGDAAGSNSRAPMGPVFSSLVYEEESENDLKIDAVHAFAREGEVENLLKCIESGIPVNARDSEGRTPLHWAIDRGHLNVAKALVDKNADVNAKDNEGQTALHYAVVCEREALAEFLVKQKADTSIKDEDGNSPLDLCESEWSWMR 333

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBP2_ARATH (Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=ACBP2 PE=1 SV=1)

HSP 1 Score: 409.068 bits (1050), Expect = 2.828e-136
Identity = 233/358 (65.08%), Postives = 286/358 (79.89%), Query Frame = 3

Query:  222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWA-AGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292
            M DW QL QS+ LGLIFSYLLAKLIS+VV+FK+DNLS+TR      +   +I   G  S  + S+      ++DS+VAE GS R++S    D  +DDD +   GVE TELD+AFSAAT FV  AAADRLSQKVP++VQ QLYGLYKIATEGPCTAPQPSALKMTARAKWQAW KLGAMPPE+AM+KYI++VT+LYP+W   G   G  G D+A+S + +G MGPVFSS VY+EESEN+LK+DAIH FAREG+++NLLKSIESG+ V+ +DSEGRTP+HWA+DRGHL IA+ L+ +NA+VNAKDNEGQTPLHYAV+C+RE IA+FLVKQNA+   KD DGNSP+DLC+S WPW++ + K
Sbjct:    1 MGDWAQLAQSVILGLIFSYLLAKLISIVVTFKEDNLSLTRHPE---ESQLEIKPEGVDSRRLDSSCGGFGGEADSLVAEQGSSRSDSVAGDDSEEDDDWE---GVESTELDEAFSAATLFVTTAAADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIEIVTQLYPTWLDGGVKAGSRGGDDAAS-NSRGTMGPVFSSLVYDEESENELKIDAIHGFAREGEVENLLKSIESGIPVNARDSEGRTPLHWAIDRGHLNIAKVLVDKNADVNAKDNEGQTPLHYAVVCDREAIAEFLVKQNANTAAKDEDGNSPLDLCESDWPWIRDSAK 351

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBP1_ARATH (Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana GN=ACBP1 PE=1 SV=2)

HSP 1 Score: 399.438 bits (1025), Expect = 1.096e-132
Identity = 225/353 (63.74%), Postives = 275/353 (77.90%), Query Frame = 3

Query:  222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQ 1280
            MADW QL QSI  GLIF+YLLAKLIS++++FKD+NLS+TR  ++  + YE +    + +   G T        DS++AE GS+R + D   D   +       GVE TELD+AFSAATAFVAAAA+DRLSQKV NE+QLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAW KLGAMPPE+AM+KYID+VT+LYP+W  G     G      S +  GPMGPVFSS VYEEES+N+LK+DAIH FAREG+++NLLK IE+G+ V+ +DSEGRTP+HWA+DRGHL +AEAL+ +NA+VNAKDNEGQT LHYAV+CERE +A+FLVKQ AD   KD DGNSP+DLC+S W W++
Sbjct:    1 MADWYQLAQSIIFGLIFAYLLAKLISILLAFKDENLSLTRNHTTQSE-YENLRKVETLTGISGET--------DSLIAEQGSLRGDEDESDDDDWE-------GVESTELDEAFSAATAFVAAAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIDLVTQLYPAWVEG-----GSKRRNRSGEAAGPMGPVFSSLVYEEESDNELKIDAIHAFAREGEVENLLKCIENGIPVNARDSEGRTPLHWAIDRGHLNVAEALVDKNADVNAKDNEGQTSLHYAVVCEREALAEFLVKQKADTTIKDEDGNSPLDLCESEWSWMR 332

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_BOVIN (Acyl-CoA-binding domain-containing protein 6 OS=Bos taurus GN=ACBD6 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.821e-38
Identity = 83/217 (38.25%), Postives = 113/217 (52.07%), Query Frame = 3

Query:  606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIES-GVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL 1253
            L Q    E  L LY  YK    G C  P+PS      + KW+AW  LG   P  AMQ+YI VV +L PSW   S   KG   N       GP+           E + D     I  + RE ++D++ K I++  + V+++D EGRT +HWA DRGH ++   LL   A++N +DNEGQT LHYA  CE  DI + L++  AD   +D DG  P ++
Sbjct:   56 LVQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKLDPSWNPQSPEKKGKEANTG---FGGPVVSSLYHEEIIREEDKD-----IFDYCRENNIDHITKVIKTKNMDVNMKDEEGRTLLHWACDRGHKELVTVLLQYRADINCQDNEGQTALHYAAACEFLDIVELLLQSGADPTLRDQDGCLPEEV 264

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_HUMAN (Acyl-CoA-binding domain-containing protein 6 OS=Homo sapiens GN=ACBD6 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.155e-37
Identity = 91/229 (39.74%), Postives = 121/229 (52.84%), Query Frame = 3

Query:  606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIES-GVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL--CDSGWPWLQR 1283
            L Q    E  L LY  YK    G C  P+PS      + KW+AW  LG   P  AMQ+YI VV +L P W       KG   N       G  GPV SS  +EE    + K   I  + RE ++D++ K+I+S  V V+++D EGR  +HWA DRGH ++   LL   A++N +DNEGQT LHYA  CE  DI + L++  AD   +D DG  P ++  C +    LQR
Sbjct:   56 LIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKLDPGWNPQIPEKKGKEANT------GFGGPVISSLYHEETIREEDK--NIFDYCRENNIDHITKAIKSKNVDVNVKDEEGRALLHWACDRGHKELVTVLLQHRADINCQDNEGQTALHYASACEFLDIVELLLQSGADPTLRDQDGCLPEEVTGCKTVSLVLQR 276

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_RAT (Acyl-CoA-binding domain-containing protein 6 OS=Rattus norvegicus GN=Acbd6 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.765e-36
Identity = 91/234 (38.89%), Postives = 124/234 (52.99%), Query Frame = 3

Query:  606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIES-GVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL--CDSGWPWLQ--RAGK 1292
            L Q    E  L LY  YK    G C  P+P+      + KW+AW  LG   P  AMQ+YI  V +L P W    +  KG   ++      G  GPV SS  +EE    + K   I  + RE ++D++ K+I+S  V V++ D EGR  +HWA DRGH ++ + LL   A +N +DNEGQT LHYA  CE  DI + L++  AD   +D DG  P ++  C +    LQ  RAGK
Sbjct:   56 LVQVASREQLLYLYARYKQVKVGNCNIPKPNFFDFEGKQKWEAWKALGDSSPSQAMQEYIAAVKKLDPGWNPQVSEKKGKEGSS------GFGGPVVSSLYHEETIREEDK--NIFDYCRENNIDHITKAIKSKTVDVNMTDEEGRALLHWACDRGHKELVKVLLQCEAGINCQDNEGQTALHYAAACEFSDIVELLLQSGADPTLRDQDGCLPEEVTGCKAVSLVLQLHRAGK 281

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_MOUSE (Acyl-CoA-binding domain-containing protein 6 OS=Mus musculus GN=Acbd6 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.725e-35
Identity = 86/229 (37.55%), Postives = 121/229 (52.84%), Query Frame = 3

Query:  606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVS-VHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL--CDSGWPWLQR 1283
            L Q    E  L LY  +K    G C  P+P+      + KW+AW  LG   P  AMQ+YI  V +L P W    +  KG   ++      G  GPV SS  +EE    + K   I  + RE ++D++ K+I+S  + V++ D EGR  +HWA DRGH ++ + LL   A +N +DNEGQT LHYA  CE  DI + L++  AD   +D DG  P ++  C +    LQR
Sbjct:   56 LVQVASREQLLYLYARFKQVKVGNCNTPKPNFFDFEGKQKWEAWKALGDSSPSQAMQEYIAAVKKLDPGWNPQVSEKKGKEGSS------GFGGPVVSSLYHEETIREEDK--NIFDYCRENNIDHIAKAIKSKAADVNMTDEEGRALLHWACDRGHKELVKVLLQYEAGINCQDNEGQTALHYAAACEFLDIVELLLQSGADPTLRDQDGCLPEEVTGCKAVSLLLQR 276

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_DANRE (Acyl-CoA-binding domain-containing protein 6 OS=Danio rerio GN=acbd6 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 8.090e-34
Identity = 81/220 (36.82%), Postives = 116/220 (52.73%), Query Frame = 3

Query:  606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIES-GVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDS 1262
            L Q    E  L LY  +K    G C   +P       + KW AW +LG M  E AMQ+Y+  V  L P  +  S+  +GG          G  GP  SS   EE+   + K   I  + RE +++++ K+I S  V V+ +D EGR  +HWA DRGH  +   LL  NA++N++D+EGQT LHYA  CE  +I + L+K  AD   KD +G+ P ++ +S
Sbjct:   74 LVQTASREQLLYLYARFKQVKVGKCNTSKPGFFDFEGQRKWSAWKQLGDMSAEQAMQEYVTCVHALDPEGSQKSSERRGGEKRT------GFGGPAVSSLYQEEKIREEDKN--IFDYCRENNIEHVSKAISSKTVDVNTRDEEGRALLHWACDRGHKDLVSLLLQNNADINSQDDEGQTALHYASACEFAEIVELLLKAGADPSIKDQEGSLPEEVTES 285

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_XENTR (Acyl-CoA-binding domain-containing protein 6 OS=Xenopus tropicalis GN=acbd6 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.731e-32
Identity = 77/211 (36.49%), Postives = 109/211 (51.66%), Query Frame = 3

Query:  636 LQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMG-PXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESG-VSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDS 1262
            L LY  YK    G C  P+P       + KW+AW  LG    + AM +YI+ V +L P W+         A     K+ K   G PV S     +E+  +   D I  + RE ++  +  ++ +G + V++ D EGR  +HWA DRGH ++   LL  NA++N +D+EGQTPLHYA  CE  DI   L+   AD    DNDG  P ++ DS
Sbjct:   56 LFLYARYKQVKVGRCNTPKPGFFDYEGKKKWEAWKALGDYSCQQAMNEYIETVKKLDPDWSPQ-------ALEEPHKEPKTTFGGPVVSCLYKVQETLREEDKD-IFDYCRENNISRVSHALSTGAIDVNVADDEGRCLLHWACDRGHTQLVSVLLFHNAHINMQDSEGQTPLHYASACEFPDIVDLLLDHGADPSLVDNDGFQPHEVTDS 258

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_XENLA (Acyl-CoA-binding domain-containing protein 6 OS=Xenopus laevis GN=acbd6 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 7.224e-32
Identity = 77/214 (35.98%), Postives = 109/214 (50.93%), Query Frame = 3

Query:  636 LQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPM----GPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESG-VSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDS 1262
            L LY  YK    G C  P+P       + KW+AW  LG    + AM +YI+ V +L P W+            A  +  K P     GPV S     +E+  +   D I  + RE +   +  ++ +G V V++ D EGR+ +HWA DRGH ++   +L  NA++N +D+EGQTPLHYA  CE  DI   L+   AD    DNDG  P ++ DS
Sbjct:   56 LYLYARYKQVKVGRCNTPKPGFFDYEGKKKWEAWKALGDYSHQQAMTEYIETVKKLDPDWSP----------QALEEPYKEPKTTFGGPVVSCLYKVQETLREEDKD-IFDYCRENNHSRVSHALSTGSVDVNVADDEGRSLLHWACDRGHTQLVSVILFHNAHINMQDSEGQTPLHYASACEFPDIVDLLLDHGADPSLVDNDGFQPHEVTDS 258

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_DICDI (Acyl-CoA-binding domain-containing protein 6 homolog OS=Dictyostelium discoideum GN=acbd6 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.994e-25
Identity = 79/252 (31.35%), Postives = 120/252 (47.62%), Query Frame = 3

Query:  618 VPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGAD--------------------------NASSKDVKGP----MGPXXXXXX-----XXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSV-HLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNA-DKDTKDNDGNSPVDLCDS 1262
            + NE QL LY  YK AT G C    P       ++KW +W+ L  +    AM  YI +V  L P W +   + +                                +  +++ P    MGPV S F        E+ E + K D +  +    D++ + K IE+  ++ +  D +GRT + WA DRG+ +IA+ L+   +NVN +D EG TPLHYAV+C++ +I K L+ Q++ DK  KDN  + P D  DS
Sbjct:   27 IKNEEQLYLYCNYKQATIGDCNTKAPPFYDYIGKSKWNSWNSLKGVEKIVAMNSYISLVNALSPGWDSNIKVERATQSVFLNDEEFKELEKKEKEEKEELKKLEEENGGEIEKPKSKWMGPVLSKFSLVDDETLEKLEKNTKQD-LGYWVSVNDIERVKKEIENDKNIINEVDEDGRTALIWACDRGYFEIAKLLIENGSNVNVQDGEGMTPLHYAVVCDQFEICKLLLSQSSIDKSIKDNSDSIPSDFIDS 277

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
B9IDN1_POPTR	1.400e-138	68.63	ACYL-COA binding family protein OS=Populus trichoc...	[more]
A0A061G203_THECC	1.453e-138	80.46	Acyl-CoA binding protein 2 isoform 3 OS=Theobroma ...	[more]
A0A058ZYY6_EUCGR	4.541e-138	64.66	Uncharacterized protein OS=Eucalyptus grandis GN=E...	[more]
E0CV74_VITVI	3.200e-137	66.20	Putative uncharacterized protein OS=Vitis vinifera...	[more]
I1KAV2_SOYBN	3.901e-136	65.56	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
V4MGU4_EUTSA	4.829e-135	65.18	Uncharacterized protein OS=Eutrema salsugineum GN=...	[more]
A0A0A0KN62_CUCSA	7.543e-135	64.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_...	[more]
A0A0D2NVM9_GOSRA	5.402e-134	98.38	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2RZI8_GOSRA	1.289e-133	97.98	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A078JD86_BRANA	1.352e-133	64.20	BnaC02g44810D protein OS=Brassica napus GN=BnaC02g...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
ACBP2_ARATH	2.828e-136	65.08	Acyl-CoA-binding domain-containing protein 2 OS=Ar...	[more]
ACBP1_ARATH	1.096e-132	63.74	Acyl-CoA-binding domain-containing protein 1 OS=Ar...	[more]
ACBD6_BOVIN	1.821e-38	38.25	Acyl-CoA-binding domain-containing protein 6 OS=Bo...	[more]
ACBD6_HUMAN	2.155e-37	39.74	Acyl-CoA-binding domain-containing protein 6 OS=Ho...	[more]
ACBD6_RAT	4.765e-36	38.89	Acyl-CoA-binding domain-containing protein 6 OS=Ra...	[more]
ACBD6_MOUSE	4.725e-35	37.55	Acyl-CoA-binding domain-containing protein 6 OS=Mu...	[more]
ACBD6_DANRE	8.090e-34	36.82	Acyl-CoA-binding domain-containing protein 6 OS=Da...	[more]
ACBD6_XENTR	2.731e-32	36.49	Acyl-CoA-binding domain-containing protein 6 OS=Xe...	[more]
ACBD6_XENLA	7.224e-32	35.98	Acyl-CoA-binding domain-containing protein 6 OS=Xe...	[more]
ACBD6_DICDI	1.994e-25	31.35	Acyl-CoA-binding domain-containing protein 6 homol...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 339..353 score: 27.44 coord: 291..306 score: 37.48
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 323..352 e-value: 2.5E-4 score: 30.4 coord: 290..319 e-value: 3.5E-7 score: 39.9
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 290..322 score: 14.88
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 323..355 score: 12.957
IPR000582	Acyl-CoA-binding protein, ACBP	PRINTS	PR00689	ACOABINDINGP	coord: 152..170 score: 48.12 coord: 196..213 score: 37.3 coord: 175..190 score: 36.31
IPR000582	Acyl-CoA-binding protein, ACBP	PFAM	PF00887	ACBP	coord: 131..214 e-value: 3.3E-27 score: 94.3
IPR000582	Acyl-CoA-binding protein, ACBP	PROSITE	PS51228	ACB_2	coord: 129..219 score: 42.478
IPR000582	Acyl-CoA-binding protein, ACBP	SUPERFAMILY	47027	Acyl-CoA binding protein	coord: 129..217
None	No IPR available	PFAM	PF13637	Ank_4	coord: 292..344 e-value: 2.3E-13 score: 50.2
None	No IPR available	PANTHER	PTHR24119	FAMILY NOT NAMED	coord: 104..374 coord: 7..83
None	No IPR available	PANTHER	PTHR24119:SF0	ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6	coord: 104..374 coord: 7..83
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..29
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 51..378
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 30..50
IPR020683	Ankyrin repeat-containing domain	GENE3D	1.25.40.20		coord: 254..364 e-value: 1.7E-32 score: 111.7
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 257..363 score: 32.041
IPR020683	Ankyrin repeat-containing domain	SUPERFAMILY	48403	Ankyrin repeat	coord: 255..367
IPR014352	FERM/acyl-CoA-binding protein, 3-helical bundle	GENE3D	1.20.80.10		coord: 128..219 e-value: 6.8E-30 score: 102.4

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0017722 ID=g.arboreum_cottongen_reftransV1_0017722; Name=g.arboreum_cottongen_reftransV1_0017722; organism=Gossypium arboreum; type=contig; length=1847bp
GAGATTACTACACCTTTGGTTTGGTTTCTCCGGCGCCAATGTTTTCTAAA
CAATAATATACAAAATTAAAGGGAAAAAGAGGAAATTTTTATCTTCTTCA
ATTTCCGACAAGATTTATAGGGTTTTAGCTTAACTACGATGCAAAGATGC
TTCATTTCTAGTGTTTGTGTTTTTTAGGGTTGGATTTTGATTTTATGTCT
GGGTTTTGGTTGATTGATTCCATGGCTGACTGGCAACAGCTTTTGCAATC
GATTTTCTTAGGTCTTATATTCTCTTATCTTCTAGCGAAGCTAATCTCCT
TAGTCGTTTCTTTCAAAGACGATAACCTTTCGATAACCCGAGCCCGAAGC
AGCAATGTCCAGGGCTACGAGAAAATCGACGATTCGGGTTCCGGATCCGA
ACCGATTGGAAGTACTGAGCACTTGGGACTGCACAAGTCGGATTCGGTAG
TCGCAGAATTGGGAAGTATTAGGGCCGAGAGTGATGGCGATGGTGATGGC
GTGGATGATGACGACGACGACGATTGGGAAGGGGTGGAGTGTACGGAACT
GGATGATGCTTTCAGTGCGGCAACGGCGTTCGTGGCGGCTGCCGCGGCTG
ATCGGTTGTCGCAGAAGGTTCCGAACGAGGTGCAGTTGCAGCTTTACGGT
TTGTACAAGATTGCCACCGAAGGGCCTTGCACTGCTCCGCAGCCTTCCGC
TTTGAAAATGACGGCTCGTGCTAAGTGGCAAGCATGGCACAAATTGGGTG
CTATGCCTCCAGAGGATGCAATGCAGAAATACATTGATGTTGTGACAGAG
CTATATCCATCTTGGGCTGCTGGTTCAGCTATGGGCAAAGGTGGGGCTGA
TAATGCTTCAAGTAAAGATGTCAAAGGACCAATGGGACCGGTTTTCAGCT
CTTTTGTGTATGAAGAGGAATCTGAAAATGATTTGAAAATGGATGCTATC
CACACTTTTGCCAGAGAAGGAGATCTGGATAATTTGCTTAAAAGCATTGA
AAGTGGTGTTTCTGTGCATTTGCAAGACAGTGAAGGGAGGACCCCGATGC
ATTGGGCTGTAGATCGTGGCCATCTTAAAATTGCCGAAGCACTTCTTAGC
AGGAATGCTAATGTGAATGCTAAGGACAATGAAGGTCAAACCCCATTGCA
CTATGCTGTTATGTGTGAGAGGGAAGACATTGCCAAATTTCTTGTAAAAC
AAAATGCAGACAAAGATACGAAGGATAACGACGGCAACTCTCCAGTCGAC
CTGTGTGACTCAGGTTGGCCTTGGTTGCAACGTGCAGGCAAAGTGGAATG
ACCTTTGTTTTATTCCCAAGTTTGGTTTCAGTTAAAAAGTACTTGAAAAA
ATTTCTCATGGATGTATATGGGTATAAGCAACCTTTTGCACTTCTTTCCT
TAGTTATATGCTAATGTGGGGTACTCTGATGTTCATTGGCCTCACCTCCT
TAAGTACTGCTTTCTTTACCACCATAAGTAGATGGAAAAGAATTGGAAGG
TGGCTTTAGCCGGTGAAATGGAATTCTGATACCATCATTTGTTTGGATAG
AGTCTAGAGGTATGTAGCCGGACATGGCCAGAGAAGTTGGATGCTACTCT
TCAAAGGGATCCAATGCGGGCAGTGCAGTGAACCTAATTAGTTGTTTGAT
CTGATGGTAGATATGATAAACCGTAGATTCCATCACCCTAAATCTGTTCC
CATCAAACGGAGGCTCCGTCACCCTAAAAACTGATGTAATTTCACAATAT
AAACGGGCAAACTGCTTAAGATTACTTATCCTGCTTCACTAAAAAGTTTC
TACTGCCTGATGAAGATGTCATGATCAAAACTTTGCCTCTTATCTTT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR000582	Acyl-CoA-binding_protein
IPR020683	Ankyrin_rpt-contain_dom
IPR014352	FERM/acyl-CoA-bd_prot_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0000062	fatty-acyl-CoA binding

Search form

g.arboreum_cottongen_reftransV1_0017722, g.arboreum_cottongen_reftransV1_0017722 (contig) Gossypium arboreum

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