g.arboreum_cottongen_reftransV1_0012636, g.arboreum_cottongen_reftransV1_0012636 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: A0A058ZYV7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00129 PE=4 SV=1) HSP 1 Score: 520.39 bits (1339), Expect = 1.086e-179 Identity = 270/377 (71.62%), Postives = 306/377 (81.17%), Query Frame = -1 Query: 278 MQNGIAADGVCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQVKDEFMHTEGADVIQHLIDHFHT 1408 M+NG DGVCS+ES NGSR+VWS K SDSSSADHLV+MV+GILGS+SDWKF AEQFV+ LPDKVFVHCSERN++KLTLDGVDVMG+RLAKEVLEVI KPN+ KISF+AHSVGGLVARYAIGKLYRP K + +D+S EE R TIGGLEAINF+TVATPHLGSRGNKQVPFLFG+TA EK A+ VIHWIFRRTG HLFLTD+D K PPLL+RM++D+ + FMSAL F+RRVLY+N G DHIVGWRTSSIRR +ELPKW SLNEKYPHIVYEEHCKA D+EQ E + E+DG +DK LEE LV LSRVSW+KVDVSFH+S FAAHS+IQVKD MH EG DVI+H+IDHF T Sbjct: 1 MENGKVEDGVCSAESVNGSREVWSSKDSDSSSADHLVVMVNGILGSASDWKFAAEQFVRTLPDKVFVHCSERNVAKLTLDGVDVMGDRLAKEVLEVIDRKPNIRKISFIAHSVGGLVARYAIGKLYRPAKTKTLEDLSDKKVVEESRGTIGGLEAINFVTVATPHLGSRGNKQVPFLFGLTAIEKVATLVIHWIFRRTGCHLFLTDEDEGK----PPLLRRMVDDFSDYPFMSALGTFRRRVLYSNAGCDHIVGWRTSSIRRITELPKWQSSLNEKYPHIVYEEHCKANDTEQSEPVLGENDG-ADK------------LEEALVTSLSRVSWDKVDVSFHSSWQWFAAHSIIQVKDHNMHMEGEDVIRHIIDHFLT 360
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: R0GR05_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10026664mg PE=4 SV=1) HSP 1 Score: 519.62 bits (1337), Expect = 1.917e-179 Identity = 252/377 (66.84%), Postives = 304/377 (80.64%), Query Frame = -1 Query: 278 MQNGIAADGVCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQVKDEFMHTEGADVIQHLIDHFHT 1408 M+ +GVCS+ES +GS DVWSC+ SDSSSADHLV+MVHGILGS+ DWKFGA+QFVK+LPDKVFVHCSE+N+S LTLDGVDVMGERLA EVL++IQ+KPN+ KISFVAHS+GGL ARYAIGKLY+P E +D + ++ P+ TI GLEA+NFITVATPHLGS GNKQVPFLFG ++ EK A +IHWIF+RTGRHLFL D+D K PPLL+RM+ED +C+F+SAL +F+RRV Y+NVG+DH+VGW+T+SIRR+SELPKW +SLNEKYPHIVYEE CKACD+E E + SD +EEE+++GLS VSWEKVDVSFH+SR RFAAHSVIQVK+E MH EGADVI+H+IDHFH Sbjct: 1 MEKKQEENGVCSAESIDGSLDVWSCQNSDSSSADHLVVMVHGILGSTDDWKFGADQFVKKLPDKVFVHCSEKNVSALTLDGVDVMGERLATEVLDIIQKKPNIRKISFVAHSLGGLAARYAIGKLYKPANLEDLNDSLADTSEKPPKGTICGLEAVNFITVATPHLGSMGNKQVPFLFGFSSIEKVAGLIIHWIFKRTGRHLFLKDEDEGK----PPLLRRMVEDSGDCHFISALRVFQRRVAYSNVGHDHVVGWKTASIRRDSELPKWEDSLNEKYPHIVYEELCKACDAEDI----PEGENHSDD------------IEEEMIKGLSSVSWEKVDVSFHSSRQRFAAHSVIQVKNEDMHIEGADVIEHIIDHFHA 357
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: B9R9Y4_RICCO (Catalytic, putative OS=Ricinus communis GN=RCOM_1501780 PE=4 SV=1) HSP 1 Score: 521.161 bits (1341), Expect = 2.743e-179 Identity = 267/361 (73.96%), Postives = 296/361 (81.99%), Query Frame = -1 Query: 347 NLK*LKMQNGIAADGVCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEE-PRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQ 1426 NL+ ++ I +G+CSSES NGS DVWSCK SDSSSADHLVIMVHGILGS+SDWKF AEQFV+ LPDKVFVHCSERNM +LTLDGVDVMGERLA+EVLEVIQ KPNL KISF+AHSVGGLVARYAIG+LYR P + V D S N +EE RATIGGLEA+NFITVATPHLGSRGNKQVPFLFGV AFEKAA VIHWIF+RTGRHLFLTDDD PPLL+RM+EDY +C+FMSAL F+RRV+Y+NVGYDHIVGWRTS IRR +ELPKW + +NEKYPHIVYEEHCKA D+E+ ISTED+ +DK LEEELV GLSRVSWEKVDVSFH R RFAAHSVIQ Sbjct: 5 NLENGSVKKEITDNGICSSESVNGSCDVWSCKDSDSSSADHLVIMVHGILGSASDWKFAAEQFVRMLPDKVFVHCSERNMFRLTLDGVDVMGERLAEEVLEVIQRKPNLRKISFIAHSVGGLVARYAIGRLYR-PSQNVGD--SPNSKREEDSRATIGGLEAMNFITVATPHLGSRGNKQVPFLFGVPAFEKAAGLVIHWIFKRTGRHLFLTDDD----EGTPPLLQRMIEDYGDCFFMSALRTFRRRVVYSNVGYDHIVGWRTSCIRRNNELPKWEDYVNEKYPHIVYEEHCKAYDAEESVLISTEDN--TDK------------LEEELVTGLSRVSWEKVDVSFHTCRQRFAAHSVIQ 344
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: D7MQY1_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495187 PE=4 SV=1) HSP 1 Score: 515.383 bits (1326), Expect = 8.512e-178 Identity = 249/370 (67.30%), Postives = 299/370 (80.81%), Query Frame = -1 Query: 278 DGVCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQVKDEFMHTEGADVIQHLIDHFHT 1387 +GVC +ES +GS DVW+C+ SDSSSADHLV+MVHGILGS+ DWKFGAEQFVK+LPDKVFVHCSE+N+S LTLDGVDVMGERLA EVL++IQ KPN+ KISFVAHS+GGL ARYAIGKLY+P ++ D + + P+ TI GLEA+NFITVATPHLGS GNKQVPFLFG ++ EK A +IHWIF+RTGRHLFL D++ K PPLL+RM+ED ++C+F+SAL FKRRV Y+NVG+DH+VGW+T+SIRR+SELPKW +SLNEKYPHIVYEE CKACD+E E + SD +EEE+++GLS VSWEKVDVSFH+SR RFAAHSVIQVK+E MH EGADVI+H+IDHFH Sbjct: 5 NGVCKAESVDGSLDVWNCQNSDSSSADHLVVMVHGILGSTDDWKFGAEQFVKKLPDKVFVHCSEKNVSALTLDGVDVMGERLAAEVLDIIQRKPNIRKISFVAHSLGGLAARYAIGKLYKPANQKDVKDSLADSSEGPPKGTICGLEAMNFITVATPHLGSMGNKQVPFLFGFSSIEKVAGLIIHWIFKRTGRHLFLKDEEEGK----PPLLRRMVEDTDDCHFISALRAFKRRVAYSNVGHDHVVGWKTASIRRDSELPKWEDSLNEKYPHIVYEELCKACDAEDI----PEGENHSD------------DIEEEMIKGLSTVSWEKVDVSFHSSRQRFAAHSVIQVKNEDMHIEGADVIEHIIDHFHA 354
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: A0A078C6A9_BRANA (BnaC09g27350D protein OS=Brassica napus GN=BnaC09g27350D PE=4 SV=1) HSP 1 Score: 514.227 bits (1323), Expect = 2.635e-177 Identity = 254/370 (68.65%), Postives = 300/370 (81.08%), Query Frame = -1 Query: 281 DGVCSSESA-NGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQVKDEFMHTEGADVIQHLIDHFH 1387 +GVCS+ES +GS DVWSCK SDSSSADHLV+MVHGILGS+ DWKFGAEQFVKRLPDK+FVHCSE+N S LTLDGVDVMGERLA EVLE+++ +PN+ KISFVAHS+GGL ARYAIGKLY+PP + D SG+ + + TI GLEA+NFITVATPHLGS GN+QVPFLFGV++FEK A VIHWIF+RTGRHLFL D++ K PPLL+RM+ED +C+FMSAL FKRRV+Y+NVG+DHIVGWRT+SIRR+SELPKW +SL+EKYPHIVYEE CK+CD + E + SD +EEE+++GLS VSWEKVDVSFH+SR RFAAHSVIQVK E MH EGADVI+H+IDHFH Sbjct: 6 EGVCSAESVVDGSLDVWSCKNSDSSSADHLVVMVHGILGSTDDWKFGAEQFVKRLPDKLFVHCSEKNASALTLDGVDVMGERLASEVLEIVETRPNIRKISFVAHSLGGLAARYAIGKLYKPPNPQ---DSSGDSIEGPSQGTICGLEAVNFITVATPHLGSMGNRQVPFLFGVSSFEKVAGLVIHWIFKRTGRHLFLKDEEEGK----PPLLRRMVEDTGDCHFMSALRAFKRRVVYSNVGHDHIVGWRTASIRRDSELPKWEDSLDEKYPHIVYEELCKSCDGDDV----PEGENHSDD------------IEEEMIKGLSTVSWEKVDVSFHSSRQRFAAHSVIQVKSETMHIEGADVIEHIIDHFH 352
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: YO059_YEAST (Putative lipase YOR059C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR059C PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.365e-14 Identity = 64/237 (27.00%), Postives = 107/237 (45.15%), Query Frame = -1 Query: 629 SSADHLVIMVHGILGSSSDWKFGAEQFVKRLP-----DKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPN--LCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSI 1318 +S HL +++HG+ G+ + + L D + ++N T DG++++G R EV E I++ + + K+S + +S GGLVAR+ IGK+ KE +D EP+ FIT+ATPHLG + +A A + I ++GR +F+ + +L + ++ AL LFK R+ +ANV D V + T+ I Sbjct: 2 TSDKHLFVLIHGLWGNYTHMESMRTILSTTLKKEDVNDDMIYFLPKQNAMFKTFDGIEIIGYRTLIEVCEFIRDYKDGKITKLSVMGYSQGGLVARFMIGKMLTEFKELFEDI--------EPQL---------FITMATPHLGVEFYNPTGIAYK-SALYSALRTLGSTILGKSGREMFIANSS-----------NNILVKLSQGEYLEALSLFKWRIAFANVKNDRTVAFYTAFI 209
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: YE7A_SCHPO (Putative lipase C4A8.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4A8.10 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.826e-11 Identity = 70/244 (28.69%), Postives = 112/244 (45.90%), Query Frame = -1 Query: 617 SSADHLVIMVHGILGS-SSDWKFGAEQFV---KRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVI----QEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLT--DDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRES 1318 S HLV++ HG+ + +D ++ E+ + K + + V V N + T GV +G+RL + +L++ P IS VAHS+GGLV YA+G ++ + A + + F+T+ATP LG G + P G KA SY I +TG+ L LT + +E P +L F A+ F++R+L+AN D+IV + TS++ S Sbjct: 302 SKNSHLVVLTHGMHSNVGADMEYLKEKLIESSKSVKELVVVRGFTGNYCQ-TEKGVRWLGKRLGEWLLDITGWGSASFPRYSHISVVAHSLGGLVQTYAVGYVH----------------AKTHGAFFQAIHPVFFVTLATPWLGVAG--EHPSYIG-----KALSY---GIIGKTGQDLSLTPLNHSIESRPF------LVLMSDPSTPFFQAVSFFEKRILFANTTNDYIVPFGTSAMEVSS 512
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: ROG1_YEAST (Putative lipase ROG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ROG1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.913e-10 Identity = 72/251 (28.69%), Postives = 111/251 (44.22%), Query Frame = -1 Query: 629 DVWS--CKGSDSSSADHLVIMVHGILGS-SSDWKFGAEQFVK---RLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNK----QVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDD-DVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSI 1348 D+W+ + + HLV++ HG+ + S+D + EQ K P + V R T GV +G RLA+ +++ + ++ ++ KISFV HS+GGL+ +AI +Y E + INFIT+A+P LG + +V FGV +TG+ L L +D +V KP L ++E L FKRR +YAN D IV T+S+ Sbjct: 173 DLWNLPVQITTPQKKKHLVVLTHGLHSNVSTDLVYIMEQIYKAQKNYPHEQIVVKGYRGNVCQTEKGVKYLGTRLAEYIIQDLYDE-SIRKISFVGHSLGGLIQAFAIAYIY-----------------EVYPWFFKKVNPINFITLASPLLGIVTDNPAYIKVLLSFGVIG--------------KTGQDLGLENDVEVGKPLLYLLSGLPLIE---------ILRRFKRRTVYANAINDGIVPLYTASL 382
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: YD109_YEAST (Putative lipase YDL109C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL109C PE=1 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 3.165e-8 Identity = 66/247 (26.72%), Postives = 103/247 (41.70%), Query Frame = -1 Query: 629 SRDVWSC-KGSDSSSADHLVIMVHGILGS-SSDWKFGAEQFVK---RLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSI 1354 + D+W + D S HLVI+ HG + S+D ++ E+ K P++ V + T G+ +G LA +++ + + ++ KISF+ HS+GGL +AI + K + +E INFI++A+P LG + + I TG+ L L D + PL E +S L FKRR LYAN D IV +SS+ Sbjct: 177 TADIWKVPRPIDMSQKSHLVILTHGFQSNVSADMEYLMEEIYKAQMNNPNERLVIKGYMKNACETEKGIKFLGVGLANYIIDELYDD-SVGKISFIGHSLGGLTQTFAICYI-----------------KTKYPYFFKKVEPINFISLASPLLG----------IATSTPNYVKMSLSMGIIGTTGQELGLKDGNYGDKPLL--------YLLSEESLISVLARFKRRTLYANAVNDGIVPLYSSSL 387
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: YD444_YEAST (Putative lipase YDR444W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR444W PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 5.172e-8 Identity = 70/267 (26.22%), Postives = 108/267 (40.45%), Query Frame = -1 Query: 629 SRDVWSCKGSDSSSADHLVIMVHGILGS-SSDWKFGAEQFVK-------RLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVI---QEKPNLCKISFVAHSVGGLVARYAIG--KLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFL------------TDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSI 1354 + +W HLVIM HGI + D + ++ + + + V N+ K + G+ +G R+ K VLE + +K + +ISF+ HS+GG A+ + RP + D + G++ +NFIT+A+P +G G+ PF V A TGR L L DD+V P K +LE + FKRR +YANV D IV RT+++ Sbjct: 181 TETLWDLPPKFPEKPVHLVIMTHGIFSNIGCDMLYMKDKIEEMTFPMDESINPNIIVRGFMGNVGK-SGHGIHCLGVRVGKYVLETVDKLNKKYKVDRISFIGHSLGGPTQSMAVRYISIKRP---DFFD-------------AVKGVKPVNFITLASPFIGVIGD--FPFYLSVPLDMGALGL--------TGRDLNLKYTPLTSKDGLYADDEV-----YPEHSKYILEILPQAPAKKVFESFKRRTIYANVMDDGIVPLRTAAL 415
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: F135A_MOUSE (Protein FAM135A OS=Mus musculus GN=Fam135a PE=2 SV=2) HSP 1 Score: 56.6102 bits (135), Expect = 4.448e-7 Identity = 73/292 (25.00%), Postives = 121/292 (41.44%), Query Frame = -1 Query: 467 HLVIMVHGILGSSSDWKFGAEQFVKRLP-DKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQ-EKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEE----------HCKACDSEQYETISTEDDGSSDKLVSWVAH 1306 HL++ VHG+ G+S+D + LP +V SERN + T D M +RL E+++ IQ + KISF+ HS+G L+ R + + PR + F++++ PHLG+ N G+ +K W +++G L LT D P + L ++ + LH FK VL ++ D V + ++ I E+ K L +K +Y E K C+ +Y I+ + ++D L+ AH Sbjct: 1240 HLIVCVHGLDGNSADLRLVKTYIELGLPGGRVDFLMSERNQND-TFADFDCMTDRLLDEIIQYIQIYSLTVSKISFIGHSLGNLIIRSVLTR---------------------PRFKYYLSKLHTFLSLSGPHLGTLYNSSALVNTGLWFMQK-------W--KKSGSLLQLTCRDHSDP--RQTFLYKLSNK-------AGLHYFKNVVLVGSL-QDRYVPYHSARI----EMCKTA--LKDKQSGQIYSEMIHNLLRPVLQSKGCNLVRYNVINALPN-TADSLIGRAAH 1483
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: F135A_PONAB (Protein FAM135A OS=Pongo abelii GN=FAM135A PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 8.117e-7 Identity = 72/292 (24.66%), Postives = 123/292 (42.12%), Query Frame = -1 Query: 467 HLVIMVHGILGSSSDWKFGAEQFVKRLP-DKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQ-EKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEE----------HCKACDSEQYETISTEDDGSSDKLVSWVAH 1306 HL++ VHG+ G+S+D + LP ++ SERN + T D M +RL E+++ IQ + KISF+ HS+G L+ R + + PR + F++++ PHLG+ N G+ +K W +++G L LT D P + L ++ + + LH FK VL ++ D V + ++ I E+ K +L +K +Y E K C+ +Y I+ + ++D L+ AH Sbjct: 829 HLIVCVHGLDGNSADLRLVKTYIELGLPGGRIDFLMSERNQND-TFADFDSMTDRLLDEIIQYIQIYSLTVSKISFIGHSLGNLIIRSVLTR---------------------PRFKYYLNKLHTFLSLSGPHLGTLYNSSALVNTGLWFMQK-------W--KKSGSLLQLTCRDHSDP--RQTFLYKLSKK-------AGLHYFKNVVLVGSLQ-DRYVPYHSARI----EMCK--TALKDKQSGQIYSEMIHNLLQPVLQSKDCNLVRYNVINALPN-TADSLIGRAAH 1072 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 7
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0012636 ID=g.arboreum_cottongen_reftransV1_0012636; Name=g.arboreum_cottongen_reftransV1_0012636; organism=Gossypium arboreum; type=contig; length=1462bpback to top |