g.arboreum_cottongen_reftransV1_0012636, g.arboreum_cottongen_reftransV1_0012636 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: A0A068UAR7_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_15 OS=Coffea canephora GN=GSCOC_T00020390001 PE=4 SV=1) HSP 1 Score: 545.814 bits (1405), Expect = 0.000e+0 Identity = 270/377 (71.62%), Postives = 310/377 (82.23%), Query Frame = -1 Query: 284 KMQNG-IAADGVCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQVKDEFMHTEGADVIQHLIDHF 1411 K++NG + GVCS+ +ANG DV+SCKGSD+SSADHLVIMVHGILGS+SDWKF AEQFV+ LPDKVFVHCSE+NM+ LTLDGVDVMGERL++EVL+VI+ KP++ KISFVAHSVGGLVARYAIG+LYRPP + + S N EE +ATI GLE INFIT ATPHLGSRGNKQVPFLFGV AFEKAA IHWIFRRTGRHLFLT D VE +PPLLKR++ED +C+FMSAL FKRRV Y+NVGYDHIVGWRTSSIRR +ELPKW +S+NEKYPHIVYEE CKACD EQ +++ EDDG + +E E+V GLSRVSWEKVDVSFH+SR+RFAAHSVIQVK +MHTEGADVIQH+IDHF Sbjct: 3 KIENGRVENTGVCSTPTANGGEDVYSCKGSDASSADHLVIMVHGILGSASDWKFAAEQFVRMLPDKVFVHCSEKNMAALTLDGVDVMGERLSEEVLDVIKRKPDMRKISFVAHSVGGLVARYAIGRLYRPPSKGNPEFSSTNSNAEESKATIAGLEPINFITFATPHLGSRGNKQVPFLFGVPAFEKAAGLFIHWIFRRTGRHLFLT-DHVEG---KPPLLKRLVEDDGDCHFMSALQAFKRRVAYSNVGYDHIVGWRTSSIRRHNELPKWEDSINEKYPHIVYEERCKACDGEQCDSVLVEDDGLDE-------------IEGEMVTGLSRVSWEKVDVSFHSSRMRFAAHSVIQVKYHYMHTEGADVIQHMIDHF 362
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: A0A0A0KU51_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G023000 PE=4 SV=1) HSP 1 Score: 538.495 bits (1386), Expect = 0.000e+0 Identity = 265/377 (70.29%), Postives = 302/377 (80.11%), Query Frame = -1 Query: 278 MQNGIAADGVCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQVKDEFMHTEGADVIQHLIDHFHT 1408 M+NG++ +GVCSSES NG +DVWS K SDS SADH V+MV+GI+GSS+DW++ AEQFVKRLPDKVFVHCSERN+SKLTLDGVDVMG+RLA+E+LEVIQ KPNL KISFVAHSVGGLVARYAIGKLYRPP+ E + S NG +E TIGGLE +NF+TVATPHLGSRGNKQVPFLFG+TA EK AS +IHWI RRTG HLF+TDDD K PPL++RM+ED E YFMSAL FKRRV+Y+NV YDH VGWRTSSIRR +ELPKW +++NEKYPHIVYEE CK DSE E S E V++P LEEELV GLSR+SWEKVDVSFH SR R AAHS+IQVKD H EGADVI H+IDHF T Sbjct: 1 MENGVSDNGVCSSESVNGGQDVWSSKESDSLSADHFVVMVNGIMGSSTDWRYAAEQFVKRLPDKVFVHCSERNVSKLTLDGVDVMGDRLAEEILEVIQRKPNLRKISFVAHSVGGLVARYAIGKLYRPPETEQLEAPSTNGQPQESFGTIGGLEPVNFVTVATPHLGSRGNKQVPFLFGLTAIEKIASLIIHWILRRTGEHLFMTDDDGGK----PPLVQRMIEDQGEYYFMSALKSFKRRVVYSNVDYDHFVGWRTSSIRRINELPKWEDAVNEKYPHIVYEERCKGTDSENIEPTSAE-----------VSYPDR--LEEELVTGLSRLSWEKVDVSFHKSRQRLAAHSIIQVKDHTAHIEGADVIDHIIDHFQT 360
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: W9R7R0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001235 PE=4 SV=1) HSP 1 Score: 536.569 bits (1381), Expect = 0.000e+0 Identity = 268/355 (75.49%), Postives = 296/355 (83.38%), Query Frame = -1 Query: 344 MQNGIAADGVCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQV 1408 M+NG+ +G+CSSES NGSRDVWSCK SDS SADHLV+MV+GILGS++DWKF AEQFVK LPDKVFV CSE+N+S LTLDGVDVMG+RLA+EVL+VIQ KPNL KISFVAHSVGGLVARYAIGKLYRPPK +D S N C ++ R TIGGLEA+NFITVATPHLGSRGNKQVPFLFGV AFEKAAS VIH IFRRTGRHLFLTD D K PPLLKRM+EDY++CYFMSAL FKRRV+Y+NVGYDHIVGWRTSSIRR ELPKW +++NEKYPH+VYEE CK D EQ ET S EDDG SDK +EEELV GLSRVSWEKVDVSFH+ R RFAAHSVIQV Sbjct: 1 MENGVVGNGICSSESVNGSRDVWSCKFSDSGSADHLVVMVNGILGSATDWKFAAEQFVKALPDKVFVLCSEKNVSTLTLDGVDVMGDRLAEEVLDVIQRKPNLNKISFVAHSVGGLVARYAIGKLYRPPKLTTVEDSSVNECDKDSRGTIGGLEAMNFITVATPHLGSRGNKQVPFLFGVPAFEKAASCVIHLIFRRTGRHLFLTDTDEGK----PPLLKRMIEDYDDCYFMSALQTFKRRVVYSNVGYDHIVGWRTSSIRRNVELPKWEDTVNEKYPHVVYEERCKGYD-EQSETTSVEDDG-SDK------------IEEELVTGLSRVSWEKVDVSFHSIRHRFAAHSVIQV 337
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: M1CJZ0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026888 PE=4 SV=1) HSP 1 Score: 535.028 bits (1377), Expect = 0.000e+0 Identity = 267/379 (70.45%), Postives = 308/379 (81.27%), Query Frame = -1 Query: 284 MQNGIAADG---VCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRA-TIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQVKDEFMHTEGADVIQHLIDHF 1408 M+NG +G VCSSE+ NG DV+SC+ SD+SSADHLVIMVHGILGS++DWKFGAEQF++R PDKVFVHCSERN+ KLTLDGVDVMGERL++EVLEVI+ KP L KISFV+HSVGGLVARYAIG+LYRPP+ E +D+S N C E + TI GLE +NF+TVATPHLGSRGNKQVPFLFGVTA EKAA +VIH IF+RTGRHLFL D+DV + PPLLKRM+ED E F+SAL FKRRV Y+NVGYDH+VGWRTSSIRR +ELPKW +S NEKYPHIVYEEHCKAC+ EQ E++ EDD S DK LEE LV GLSRVSW+KVDVSFH SR RFAAH+VIQVKD+ + EGADVIQH+ID+F Sbjct: 1 MENGQVVNGRGGVCSSETVNGGEDVFSCEKSDASSADHLVIMVHGILGSTADWKFGAEQFIRRFPDKVFVHCSERNIGKLTLDGVDVMGERLSEEVLEVIKRKPGLKKISFVSHSVGGLVARYAIGRLYRPPRIENTEDLSANACAEGLKGCTIAGLEPVNFVTVATPHLGSRGNKQVPFLFGVTALEKAAFHVIHLIFKRTGRHLFLCDNDVGR----PPLLKRMVEDDGELQFLSALRSFKRRVAYSNVGYDHVVGWRTSSIRRNNELPKWEDSCNEKYPHIVYEEHCKACEGEQGESVLKEDD-SLDK------------LEENLVTGLSRVSWDKVDVSFHRSRRRFAAHTVIQVKDQKIDAEGADVIQHMIDNF 362
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: U5GQW4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s15100g PE=4 SV=1) HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0 Identity = 261/355 (73.52%), Postives = 295/355 (83.10%), Query Frame = -1 Query: 344 MQNGIAADGVCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQV 1408 M+N +GVCS+ES N S DVWSCK SDSSSADHLVIMVHGILGS++DWKFGAEQFV+ LPDKVFVHCSE+NM +LTLDGVDVMG+RLA+EVLEVIQ KPNL KISFVAHSVGGLVARYAIG+LYRPPK+E +D + ++ +ATIGGLE +NFITVATPHLGSRGNKQVPFLFGVTAFE+AA+ +IHWIF+RTGRHLFL DDD K PPLLKRM+EDY +C+FMSAL +FKRRV Y+NV YDHIVGWRTSSIRR ELPKW + +N++YPHIVYEE CKACD+EQ E +ST+DD S DK LEEELV GLSRVSWEKVD SFH R RFAAHSVIQV Sbjct: 1 MENRAVENGVCSTESVNVSSDVWSCKNSDSSSADHLVIMVHGILGSNTDWKFGAEQFVRTLPDKVFVHCSEKNMFRLTLDGVDVMGDRLAEEVLEVIQRKPNLQKISFVAHSVGGLVARYAIGRLYRPPKKENVEDSTDGTSIDDLKATIGGLEPMNFITVATPHLGSRGNKQVPFLFGVTAFEQAANLLIHWIFKRTGRHLFLNDDDEGK----PPLLKRMIEDYGDCFFMSALRIFKRRVAYSNVCYDHIVGWRTSSIRRNIELPKWEDYINKEYPHIVYEECCKACDTEQSELVSTDDD-SFDK------------LEEELVTGLSRVSWEKVDASFHTCRQRFAAHSVIQV 338
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: K4C1N3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc05g052020.2 PE=4 SV=1) HSP 1 Score: 526.554 bits (1355), Expect = 0.000e+0 Identity = 265/379 (69.92%), Postives = 305/379 (80.47%), Query Frame = -1 Query: 284 MQNGIAADG---VCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPR-ATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQVKDEFMHTEGADVIQHLIDHF 1408 M+NG +G VCSSE+ NG DV+SC+ +D+SSADHLVIMVHGILGS++DWKFGAEQFV+R PDKVFVHCSERN+ KLTLDGVDVMGERL++EVLEVI+ KP L KISFV+HSVGGLVARYAIG+LYRP + E +D+S N C E TI GLE +NFITVATPHLGSRGNKQVPFLFGVTA EKAA +VIH IF+RTGRHLFL D+D +PPLLKRM+ED E F+SAL FKRRV Y+NVGYDH+VGWRTSSIRR +ELPKW +S NEKYPHIVYEEHCKAC+ EQ E++ EDD S DK LEEELV GLSRVSW+KVDVSFH R RFA+H+VIQVKD+ + EGADVIQH+ID+F Sbjct: 1 MKNGEVVNGRGGVCSSETVNGGEDVFSCEKTDASSADHLVIMVHGILGSTTDWKFGAEQFVRRFPDKVFVHCSERNIGKLTLDGVDVMGERLSEEVLEVIKRKPGLKKISFVSHSVGGLVARYAIGRLYRPRRIENTEDLSANACVEGLEDCTIAGLEPVNFITVATPHLGSRGNKQVPFLFGVTALEKAAFHVIHLIFKRTGRHLFLCDND----EGRPPLLKRMVEDKGELQFLSALRSFKRRVAYSNVGYDHVVGWRTSSIRRNNELPKWEDSFNEKYPHIVYEEHCKACEGEQGESVVKEDD-SLDK------------LEEELVTGLSRVSWDKVDVSFHRIRRRFASHTVIQVKDQKIDAEGADVIQHMIDNF 362
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: G7IDH3_MEDTR (Serine esterase family protein OS=Medicago truncatula GN=MTR_1g040460 PE=4 SV=1) HSP 1 Score: 524.242 bits (1349), Expect = 0.000e+0 Identity = 269/370 (72.70%), Postives = 302/370 (81.62%), Query Frame = -1 Query: 278 DGVCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQVKDEFMHTEGADVIQHLIDHFHT 1387 + VC+SES +GSRDVWS K SDSSSADHLV+MV+GILGSS+DWKF +EQFVK LPDKVFVHCSERN+SK TLDGVDVMGERLA+EV+EVI+ KPN+ K+SF++HSVGGLVARYAIGKLYRPP E D K + TI GLEA+NF+TVATPHLGSRGNKQVPFLFGVTAFEK AS VIHWIFRRTGRHLFLTDDD K PPLLKRM+EDY+ YFMSAL FKRRV+Y+NVGYDHIVGWRTSSIRR +ELPKW ++LNEKYPH+VYEE CKACD+EQ + + D SDK +EEELV GLS VSWEKVDVSFH+SR RFAAHSVIQVKD+ H EGADVI H+IDHF T Sbjct: 4 NDVCTSESFDGSRDVWSSKSSDSSSADHLVVMVNGILGSSTDWKFASEQFVKELPDKVFVHCSERNVSKHTLDGVDVMGERLAEEVIEVIRRKPNMRKVSFISHSVGGLVARYAIGKLYRPPGNEPIQDSGNKESKVDSIGTICGLEAMNFVTVATPHLGSRGNKQVPFLFGVTAFEKLASVVIHWIFRRTGRHLFLTDDDEGK----PPLLKRMIEDYDGYYFMSALRTFKRRVIYSNVGYDHIVGWRTSSIRRNNELPKWEDTLNEKYPHVVYEELCKACDAEQCDLLK---DNGSDK------------IEEELVTGLSSVSWEKVDVSFHSSRQRFAAHSVIQVKDQISHIEGADVILHIIDHFLT 354
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: Q949V0_ARATH (AT5G51180 protein OS=Arabidopsis thaliana GN=At5g51180 PE=2 SV=1) HSP 1 Score: 524.242 bits (1349), Expect = 0.000e+0 Identity = 251/370 (67.84%), Postives = 301/370 (81.35%), Query Frame = -1 Query: 278 DGVCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQVKDEFMHTEGADVIQHLIDHFHT 1387 +G+C +ES +GS DVWSC+ SDSSSADHLV+MVHGILGS+ DWKFGAEQFVK++PDKVFVHCSE+N+S LTLDGVDVMGERLA EVL++IQ KPN+CKISFVAHS+GGL ARYAIGKLY+P +E D + +E P+ TI GLEA+NFITVATPHLGS GNKQVPFLFG ++ EK A +IHWIF+RTGRHLFL D++ K PPLL+RM+ED ++C+F+SAL FKRRV Y+NVG+DH+VGW+T+SIRR+SELPKW +SLNEKYPHIVYEE CKACD E I ++ S D +EEE+++GLS VSWEKVDVSFH+SR RFAAHSVIQVK+E MH EGADVI+H+IDHFH Sbjct: 8 NGLCKAESVDGSLDVWSCQNSDSSSADHLVVMVHGILGSTDDWKFGAEQFVKKMPDKVFVHCSEKNVSALTLDGVDVMGERLAAEVLDIIQRKPNICKISFVAHSLGGLAARYAIGKLYKPANQEDVKDSVADSSQETPKGTICGLEAMNFITVATPHLGSMGNKQVPFLFGFSSIEKVAGLIIHWIFKRTGRHLFLKDEEEGK----PPLLRRMVEDTDDCHFISALRAFKRRVAYSNVGHDHVVGWKTASIRRDSELPKWEDSLNEKYPHIVYEELCKACD---MEDIPEGENHSDD-------------IEEEMIKGLSSVSWEKVDVSFHSSRQRFAAHSVIQVKNEDMHIEGADVIEHIIDHFHA 357
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: K4BIM8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc03g093510.2 PE=4 SV=1) HSP 1 Score: 521.546 bits (1342), Expect = 3.910e-180 Identity = 259/376 (68.88%), Postives = 302/376 (80.32%), Query Frame = -1 Query: 284 MQNG-IAADGVCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQVKDEFMHTEGADVIQHLIDHF 1408 M+NG + GV SSE+ NG DV+S K SD S+ADHLV+MVHGILGS+SDWKFGAEQFV+ LPDKVFVHCSERNM+KL+LDGVDVMGERLA+EVL+V++ +P L KISFVAHSVGG+VARYAIGKLYRPP+ E S + +E + TI GL INFITVA+PHLGSRGNKQVPFLFGVTAFEKAA +HWIF++TGRHLFL +D+ +PPLL+RM+ED E FMSAL FKRRV Y+NVGYDHIVGW TSSIRR +ELPKW +SL++KYPHIVY+EHCKACD EQ E++ E D DK LEEELV GLSRVSWEK+DVSFH+SR RFAAHSVIQVKD +MH EGADV+QH+ID+F Sbjct: 1 MENGKLHNGGVSSSETFNGGEDVYSSKQSDVSTADHLVMMVHGILGSASDWKFGAEQFVRNLPDKVFVHCSERNMAKLSLDGVDVMGERLAEEVLDVVKRRPGLKKISFVAHSVGGVVARYAIGKLYRPPRTENGQKFSDDTSEEGSKGTIAGLAPINFITVASPHLGSRGNKQVPFLFGVTAFEKAAGLCVHWIFKKTGRHLFLNEDEG-----KPPLLRRMVEDDGELRFMSALSSFKRRVAYSNVGYDHIVGWGTSSIRRNNELPKWEDSLSKKYPHIVYQEHCKACDGEQGESVVKEGD-QFDK------------LEEELVTGLSRVSWEKIDVSFHSSRNRFAAHSVIQVKDHYMHAEGADVVQHIIDNF 358
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Match: M1AQD7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400010748 PE=4 SV=1) HSP 1 Score: 520.39 bits (1339), Expect = 1.017e-179 Identity = 259/376 (68.88%), Postives = 303/376 (80.59%), Query Frame = -1 Query: 284 MQNG-IAADGVCSSESANGSRDVWSCKGSDSSSADHLVIMVHGILGSSSDWKFGAEQFVKRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEEHCKACDSEQYETISTEDDGSSDKLVSWVAHPKSVTLEEELVRGLSRVSWEKVDVSFHNSRLRFAAHSVIQVKDEFMHTEGADVIQHLIDHF 1408 M+NG + GV SSE+ NG DV+S K SD+S+ADHLV+MVHGILGS+SDWKFGAEQFV+ LPDKVFVHCSERNM+KL+LDGVDVMGERLA+EVL+V++ +P L KISFVAHSVGG+VARYAIGKLYRPP+ + S + +E + TI GL INFITVA+PHLGSRGNKQVPFLFGVTAFEKAA +HWIF++TGRHLFL +D+ +PPLL+RM+ED E FMSAL FKRRV Y+NVGYDHIVGW TSSIRR +ELPKW +SLN+KYPHIVY+EHCKACD EQ E++ E D DK LEEELV GLSRVSWEK+DVSFH+SR RFAAHSVIQVKD +MH EGADV+QH+ID+F Sbjct: 1 MENGKVHNGGVSSSETFNGGEDVFSSKPSDASTADHLVMMVHGILGSASDWKFGAEQFVRNLPDKVFVHCSERNMAKLSLDGVDVMGERLAEEVLDVVKRRPGLKKISFVAHSVGGVVARYAIGKLYRPPRTDNVQKFSDDTSEEGSKGTIVGLAPINFITVASPHLGSRGNKQVPFLFGVTAFEKAAGLCVHWIFKKTGRHLFLNEDEG-----KPPLLRRMVEDDGELRFMSALSSFKRRVAYSNVGYDHIVGWGTSSIRRNNELPKWEDSLNKKYPHIVYQEHCKACDGEQGESVVKEGD-HFDK------------LEEELVTGLSRVSWEKIDVSFHSSRNRFAAHSVIQVKDHYMHAEGADVVQHIIDNF 358
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: YO059_YEAST (Putative lipase YOR059C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR059C PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.365e-14 Identity = 64/237 (27.00%), Postives = 107/237 (45.15%), Query Frame = -1 Query: 629 SSADHLVIMVHGILGSSSDWKFGAEQFVKRLP-----DKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPN--LCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSI 1318 +S HL +++HG+ G+ + + L D + ++N T DG++++G R EV E I++ + + K+S + +S GGLVAR+ IGK+ KE +D EP+ FIT+ATPHLG + +A A + I ++GR +F+ + +L + ++ AL LFK R+ +ANV D V + T+ I Sbjct: 2 TSDKHLFVLIHGLWGNYTHMESMRTILSTTLKKEDVNDDMIYFLPKQNAMFKTFDGIEIIGYRTLIEVCEFIRDYKDGKITKLSVMGYSQGGLVARFMIGKMLTEFKELFEDI--------EPQL---------FITMATPHLGVEFYNPTGIAYK-SALYSALRTLGSTILGKSGREMFIANSS-----------NNILVKLSQGEYLEALSLFKWRIAFANVKNDRTVAFYTAFI 209
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: YE7A_SCHPO (Putative lipase C4A8.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4A8.10 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.826e-11 Identity = 70/244 (28.69%), Postives = 112/244 (45.90%), Query Frame = -1 Query: 617 SSADHLVIMVHGILGS-SSDWKFGAEQFV---KRLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVI----QEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLT--DDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRES 1318 S HLV++ HG+ + +D ++ E+ + K + + V V N + T GV +G+RL + +L++ P IS VAHS+GGLV YA+G ++ + A + + F+T+ATP LG G + P G KA SY I +TG+ L LT + +E P +L F A+ F++R+L+AN D+IV + TS++ S Sbjct: 302 SKNSHLVVLTHGMHSNVGADMEYLKEKLIESSKSVKELVVVRGFTGNYCQ-TEKGVRWLGKRLGEWLLDITGWGSASFPRYSHISVVAHSLGGLVQTYAVGYVH----------------AKTHGAFFQAIHPVFFVTLATPWLGVAG--EHPSYIG-----KALSY---GIIGKTGQDLSLTPLNHSIESRPF------LVLMSDPSTPFFQAVSFFEKRILFANTTNDYIVPFGTSAMEVSS 512
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: ROG1_YEAST (Putative lipase ROG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ROG1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.913e-10 Identity = 72/251 (28.69%), Postives = 111/251 (44.22%), Query Frame = -1 Query: 629 DVWS--CKGSDSSSADHLVIMVHGILGS-SSDWKFGAEQFVK---RLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNK----QVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDD-DVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSI 1348 D+W+ + + HLV++ HG+ + S+D + EQ K P + V R T GV +G RLA+ +++ + ++ ++ KISFV HS+GGL+ +AI +Y E + INFIT+A+P LG + +V FGV +TG+ L L +D +V KP L ++E L FKRR +YAN D IV T+S+ Sbjct: 173 DLWNLPVQITTPQKKKHLVVLTHGLHSNVSTDLVYIMEQIYKAQKNYPHEQIVVKGYRGNVCQTEKGVKYLGTRLAEYIIQDLYDE-SIRKISFVGHSLGGLIQAFAIAYIY-----------------EVYPWFFKKVNPINFITLASPLLGIVTDNPAYIKVLLSFGVIG--------------KTGQDLGLENDVEVGKPLLYLLSGLPLIE---------ILRRFKRRTVYANAINDGIVPLYTASL 382
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: YD109_YEAST (Putative lipase YDL109C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL109C PE=1 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 3.165e-8 Identity = 66/247 (26.72%), Postives = 103/247 (41.70%), Query Frame = -1 Query: 629 SRDVWSC-KGSDSSSADHLVIMVHGILGS-SSDWKFGAEQFVK---RLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQEKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSI 1354 + D+W + D S HLVI+ HG + S+D ++ E+ K P++ V + T G+ +G LA +++ + + ++ KISF+ HS+GGL +AI + K + +E INFI++A+P LG + + I TG+ L L D + PL E +S L FKRR LYAN D IV +SS+ Sbjct: 177 TADIWKVPRPIDMSQKSHLVILTHGFQSNVSADMEYLMEEIYKAQMNNPNERLVIKGYMKNACETEKGIKFLGVGLANYIIDELYDD-SVGKISFIGHSLGGLTQTFAICYI-----------------KTKYPYFFKKVEPINFISLASPLLG----------IATSTPNYVKMSLSMGIIGTTGQELGLKDGNYGDKPLL--------YLLSEESLISVLARFKRRTLYANAVNDGIVPLYSSSL 387
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: YD444_YEAST (Putative lipase YDR444W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR444W PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 5.172e-8 Identity = 70/267 (26.22%), Postives = 108/267 (40.45%), Query Frame = -1 Query: 629 SRDVWSCKGSDSSSADHLVIMVHGILGS-SSDWKFGAEQFVK-------RLPDKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVI---QEKPNLCKISFVAHSVGGLVARYAIG--KLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFL------------TDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSI 1354 + +W HLVIM HGI + D + ++ + + + V N+ K + G+ +G R+ K VLE + +K + +ISF+ HS+GG A+ + RP + D + G++ +NFIT+A+P +G G+ PF V A TGR L L DD+V P K +LE + FKRR +YANV D IV RT+++ Sbjct: 181 TETLWDLPPKFPEKPVHLVIMTHGIFSNIGCDMLYMKDKIEEMTFPMDESINPNIIVRGFMGNVGK-SGHGIHCLGVRVGKYVLETVDKLNKKYKVDRISFIGHSLGGPTQSMAVRYISIKRP---DFFD-------------AVKGVKPVNFITLASPFIGVIGD--FPFYLSVPLDMGALGL--------TGRDLNLKYTPLTSKDGLYADDEV-----YPEHSKYILEILPQAPAKKVFESFKRRTIYANVMDDGIVPLRTAAL 415
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: F135A_MOUSE (Protein FAM135A OS=Mus musculus GN=Fam135a PE=2 SV=2) HSP 1 Score: 56.6102 bits (135), Expect = 4.448e-7 Identity = 73/292 (25.00%), Postives = 121/292 (41.44%), Query Frame = -1 Query: 467 HLVIMVHGILGSSSDWKFGAEQFVKRLP-DKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQ-EKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEE----------HCKACDSEQYETISTEDDGSSDKLVSWVAH 1306 HL++ VHG+ G+S+D + LP +V SERN + T D M +RL E+++ IQ + KISF+ HS+G L+ R + + PR + F++++ PHLG+ N G+ +K W +++G L LT D P + L ++ + LH FK VL ++ D V + ++ I E+ K L +K +Y E K C+ +Y I+ + ++D L+ AH Sbjct: 1240 HLIVCVHGLDGNSADLRLVKTYIELGLPGGRVDFLMSERNQND-TFADFDCMTDRLLDEIIQYIQIYSLTVSKISFIGHSLGNLIIRSVLTR---------------------PRFKYYLSKLHTFLSLSGPHLGTLYNSSALVNTGLWFMQK-------W--KKSGSLLQLTCRDHSDP--RQTFLYKLSNK-------AGLHYFKNVVLVGSL-QDRYVPYHSARI----EMCKTA--LKDKQSGQIYSEMIHNLLRPVLQSKGCNLVRYNVINALPN-TADSLIGRAAH 1483
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Match: F135A_PONAB (Protein FAM135A OS=Pongo abelii GN=FAM135A PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 8.117e-7 Identity = 72/292 (24.66%), Postives = 123/292 (42.12%), Query Frame = -1 Query: 467 HLVIMVHGILGSSSDWKFGAEQFVKRLP-DKVFVHCSERNMSKLTLDGVDVMGERLAKEVLEVIQ-EKPNLCKISFVAHSVGGLVARYAIGKLYRPPKEEVKDDISGNGCKEEPRATIGGLEAINFITVATPHLGSRGNKQVPFLFGVTAFEKAASYVIHWIFRRTGRHLFLTDDDVEKPPLQPPLLKRMLEDYEECYFMSALHLFKRRVLYANVGYDHIVGWRTSSIRRESELPKWGESLNEKYPHIVYEE----------HCKACDSEQYETISTEDDGSSDKLVSWVAH 1306 HL++ VHG+ G+S+D + LP ++ SERN + T D M +RL E+++ IQ + KISF+ HS+G L+ R + + PR + F++++ PHLG+ N G+ +K W +++G L LT D P + L ++ + + LH FK VL ++ D V + ++ I E+ K +L +K +Y E K C+ +Y I+ + ++D L+ AH Sbjct: 829 HLIVCVHGLDGNSADLRLVKTYIELGLPGGRIDFLMSERNQND-TFADFDSMTDRLLDEIIQYIQIYSLTVSKISFIGHSLGNLIIRSVLTR---------------------PRFKYYLNKLHTFLSLSGPHLGTLYNSSALVNTGLWFMQK-------W--KKSGSLLQLTCRDHSDP--RQTFLYKLSKK-------AGLHYFKNVVLVGSLQ-DRYVPYHSARI----EMCK--TALKDKQSGQIYSEMIHNLLQPVLQSKDCNLVRYNVINALPN-TADSLIGRAAH 1072 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0012636 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 7
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0012636 ID=g.arboreum_cottongen_reftransV1_0012636; Name=g.arboreum_cottongen_reftransV1_0012636; organism=Gossypium arboreum; type=contig; length=1462bpback to top |