g.arboreum_cottongen_reftransV1_0005130, g.arboreum_cottongen_reftransV1_0005130 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: D7L3K9_ARALL (Leucine-rich repeat family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_899749 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 7.895e-60 Identity = 123/178 (69.10%), Postives = 156/178 (87.64%), Query Frame = -2 Query: 2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532 SALKAFK+++K +SIP WSCLASWDF+ DPCA P RT F CG++CS D+TR+TQ+TLDP GY+G+LTPLIS LT+L TLDL++N F+G IPSSISSL +L+TLIL SNS SGS+PDSVT L SLE++D+SHN+L+G LPK++NSL++L++LDLSYNKLTG +PKLP NL++LALKAN Sbjct: 32 SALKAFKATVKPNSIPPWSCLASWDFTVSDPCASPRRTHFTCGITCSSDSTRVTQLTLDPAGYTGRLTPLISGLTELLTLDLAENNFYGLIPSSISSLHSLKTLILRSNSLSGSLPDSVTRLNSLESIDISHNSLTGSLPKTMNSLSNLRQLDLSYNKLTGAIPKLPRNLIDLALKAN 209
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: R0I3Z7_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10016003mg PE=4 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.001e-58 Identity = 123/178 (69.10%), Postives = 154/178 (86.52%), Query Frame = -2 Query: 2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532 SALKAFK+++K +SIP WSCLASWDF+ DPCA P RT F CG++CS D+TR+ Q+TLDP GY+G+LTPLIS LT+L TLDL++N F+G IPSSISSL +L+TLIL SNSFSGSIPDSVT L SLE++D+S N+L+G LPK++NSL +L++LDLSYNKLTG +PKLP NL++LALKAN Sbjct: 28 SALKAFKATVKPNSIPPWSCLASWDFTVSDPCASPRRTHFTCGITCSSDSTRVIQLTLDPAGYTGRLTPLISGLTELLTLDLAENNFYGVIPSSISSLVSLKTLILRSNSFSGSIPDSVTKLNSLESIDISRNSLTGSLPKTMNSLLNLRQLDLSYNKLTGAIPKLPRNLIDLALKAN 205
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: V4UAC0_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10030023mg PE=4 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 1.480e-58 Identity = 132/178 (74.16%), Postives = 151/178 (84.83%), Query Frame = -2 Query: 2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532 SALKAFK+SIK SSI WSCLASWDF+ DPCA+P RT F CG+ CS D+TR+TQ+TLDP GYSGQLTPLISQLTQLT LDLSDNYFFG IP+SISSL NLQ L L SNSFS S+PDS+T LK+L++LDLS+N+LSG LPK+ ++SL+RLDLSYNKLTG LPKLP NL ELALK N Sbjct: 10 SALKAFKASIKPSSIQPWSCLASWDFTATDPCALPRRTHFTCGLLCSSDSTRVTQLTLDPAGYSGQLTPLISQLTQLTILDLSDNYFFGPIPASISSLSNLQMLTLRSNSFSSSVPDSLTQLKNLDSLDLSYNSLSGSLPKNTFLMSSLRRLDLSYNKLTGSLPKLPPNLSELALKNN 187
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: A0A067F128_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016534mg PE=4 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.706e-58 Identity = 132/178 (74.16%), Postives = 151/178 (84.83%), Query Frame = -2 Query: 2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532 SALKAFK+SIK SSI WSCLASWDF+ DPCA+P RT F CG+ CS D+TR+TQ+TLDP GYSGQLTPLISQLTQLT LDLSDNYFFG IP+SISSL NLQ L L SNSFS S+PDS+T LK+L++LDLS+N+LSG LPK+ ++SL+RLDLSYNKLTG LPKLP NL ELALK N Sbjct: 33 SALKAFKASIKPSSIQPWSCLASWDFTATDPCALPRRTHFTCGLLCSSDSTRVTQLTLDPAGYSGQLTPLISQLTQLTILDLSDNYFFGPIPASISSLSNLQMLTLRSNSFSSSVPDSLTQLKNLDSLDLSYNSLSGSLPKNTFLMSSLRRLDLSYNKLTGSLPKLPPNLSELALKNN 210
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: A0A067LRA0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22135 PE=4 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 3.517e-56 Identity = 134/177 (75.71%), Postives = 150/177 (84.75%), Query Frame = -2 Query: 2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532 SALKAFK+SIK +SIP WSCLASWDF+ DPCA P RT F CGV+CS D+TR+TQ+TLDP+GYSGQLTPLISQLT L LDLSDN FFG IPSSISSL NLQTL L SN FSGS+PDSVT LKSL++LDLSHN+LSG LP +N ++SL RLDLSYNKLT LPKLP NLLELA+K N Sbjct: 33 SALKAFKASIKPNSIPPWSCLASWDFTTDPCAFPRRTHFTCGVTCSSDSTRVTQLTLDPVGYSGQLTPLISQLTNLVILDLSDNNFFGPIPSSISSLSNLQTLTLRSNLFSGSVPDSVTKLKSLQSLDLSHNSLSGYLPNGMNLMSSLTRLDLSYNKLTASLPKLPPNLLELAIKGN 209
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: F6I5Y7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0180g00090 PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.331e-55 Identity = 116/177 (65.54%), Postives = 148/177 (83.62%), Query Frame = -2 Query: 2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532 SAL++FK+SIK SS+ WSCLASW+FS DPC+VP RT F CG+SCS D+TR+ ITLDP GY+G L+P I++LTQLT LDLSDN G +PS++SSL NLQ L L SNSFSG +P ++TA+KSLE+LD+SHN LSG LPK++ SL+SL+RLDLS+N++TG LPKLPS+L ELAL++N Sbjct: 94 SALQSFKASIKPSSVSPWSCLASWNFSTDPCSVPRRTHFTCGISCSADSTRVISITLDPAGYAGALSPAIAKLTQLTVLDLSDNSLSGYVPSALSSLSNLQILTLRSNSFSGPLPQAITAIKSLESLDISHNFLSGSLPKTMVSLSSLRRLDLSFNRITGTLPKLPSSLSELALRSN 270
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: A0A0B2PGK8_GLYSO (DNA-damage-repair/toleration protein DRT100 OS=Glycine soja GN=glysoja_021305 PE=4 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.314e-55 Identity = 128/177 (72.32%), Postives = 153/177 (86.44%), Query Frame = -2 Query: 2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532 +ALKAFK+SIK SSI WSCLASW+F+ DPC++P T FICG++C+ D+TRI QITLDP GYSG LTPLISQLTQLTTLDL++N FG IPSSISSL NLQTL L SNSFSG+IP S+T KSL++LDL+HN+LSG LP S+NSLT+L+RLDLS+N+LTG +PKLP NLLELA+KAN Sbjct: 34 AALKAFKASIKPSSITQWSCLASWNFTTDPCSLPRHTSFICGLTCTQDSTRINQITLDPAGYSGTLTPLISQLTQLTTLDLAENNLFGPIPSSISSLSNLQTLTLRSNSFSGTIPSSITTFKSLQSLDLAHNSLSGYLPNSMNSLTTLRRLDLSFNRLTGSIPKLPPNLLELAIKAN 210
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: A0A087HD06_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G318100 PE=4 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 8.467e-55 Identity = 128/178 (71.91%), Postives = 153/178 (85.96%), Query Frame = -2 Query: 2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532 SALKAFK++IK +SIP WSCLASWDF+ DPC P RT F CG++CS D+TR+TQ+TLDP GYSG LTPLIS LTQL TLDL+DN F G+IPSS+SSL NL+TLIL SN FSGSIPDS+T L SLE+LD+SHN L+G LPK++NSL++L++LDLSYNKLTG +PKLPSNLL LALK+N Sbjct: 27 SALKAFKAAIKPNSIPQWSCLASWDFTTSDPCTSPRRTHFTCGITCSSDSTRVTQLTLDPAGYSGHLTPLISSLTQLLTLDLADNNFSGQIPSSLSSLLNLKTLILRSNLFSGSIPDSLTHLNSLESLDISHNFLTGSLPKTINSLSNLRQLDLSYNKLTGTIPKLPSNLLTLALKSN 204
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: I1LEK4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.542e-54 Identity = 129/177 (72.88%), Postives = 154/177 (87.01%), Query Frame = -2 Query: 2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532 +ALKAFK+SIK SSI WSCLASW+F+ DPC++P RT FICG++C+ D+TRI QITLDP GYSG LTPLISQLTQLTTLDL++N FG IPSSISSL NLQTL L SNSFSG+IP S+T KSL++LDL+HN+LSG LP S+NSLT+L+RLDLS+N+LTG +PKLP NLLELA+KAN Sbjct: 34 AALKAFKASIKPSSITQWSCLASWNFTTDPCSLPRRTSFICGLTCTQDSTRINQITLDPAGYSGTLTPLISQLTQLTTLDLAENNLFGPIPSSISSLSNLQTLTLRSNSFSGTIPSSITTFKSLQSLDLAHNSLSGYLPNSMNSLTTLRRLDLSFNRLTGSIPKLPPNLLELAIKAN 210
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: C0L2V1_ARAHY (Putative disease resistance protein OS=Arachis hypogaea PE=4 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 7.252e-54 Identity = 128/176 (72.73%), Postives = 150/176 (85.23%), Query Frame = -2 Query: 2 ALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 529 ALKAFK+SIK SSI WSC+ASW+F+ DPC+VP RT F CG++C+ D TRI QITLDP GY+G LTPL+SQLT L TLDLSDN F+G IPSS+SSL LQTL L SNSFSGSIP S+T LKSL++LDLS N+LSG LPKS+NSLTSL+R+DLS+NKLTG LPKLP NLL+LA+KAN Sbjct: 36 ALKAFKASIKPSSITPWSCIASWNFTTDPCSVPRRTHFTCGLTCTADNTRINQITLDPAGYTGTLTPLVSQLTSLITLDLSDNSFYGTIPSSLSSLSKLQTLSLRSNSFSGSIPPSITTLKSLQSLDLSQNSLSGFLPKSMNSLTSLRRMDLSFNKLTGGLPKLPPNLLDLAIKAN 211
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: Y1723_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.185e-13 Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = -2 Query: 14 GYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELA 352 G+SG + IS L L L++N G +P + L+NL LIL N SG IP SV + LE L L N +G +P+ + LT +KRL L N+LTG +P+ NL++ A Sbjct: 198 GFSGVIPSEISGCESLKVLGLAENLLEGSLPKQLEKLQNLTDLILWQNRLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNLIDAA 310 HSP 2 Score: 68.5514 bits (166), Expect = 3.587e-12 Identity = 34/92 (36.96%), Postives = 53/92 (57.61%), Query Frame = -2 Query: 11 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 286 N G IP S+ ++ L+ L L N F+GSIP + L ++ L L N L+G++P+ + +L +D S N+LTGF+PK ++L L L Sbjct: 244 QNRLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKL 335 HSP 3 Score: 67.3958 bits (163), Expect = 9.029e-12 Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = -2 Query: 41 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 286 +NY FG IP I +L +LQ L++ SN+ +G IP S+ L+ L + N SG +P ++ SLK L L+ N L G LPK Sbjct: 148 ENYLFGSIPRQIGNLSSLQELVIYSNNLTGVIPPSMAKLRQLRIIRAGRNGFSGVIPSEISGCESLKVLGLAENLLEGSLPK 229 HSP 4 Score: 66.6254 bits (161), Expect = 1.326e-11 Identity = 32/92 (34.78%), Postives = 55/92 (59.78%), Query Frame = -2 Query: 11 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 286 N+ G I + + L+NL+ L L +N+F+G IP + L + ++S N L+G +PK L S +++RLDLS NK +G++ + L+ L + Sbjct: 484 QNWLSGNISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEI 575 HSP 5 Score: 60.8474 bits (146), Expect = 9.866e-10 Identity = 40/94 (42.55%), Postives = 54/94 (57.45%), Query Frame = -2 Query: 11 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLE-TLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 289 SDN G IP S L L L L N S +IP + L SL+ +L++SHN LSG +P SL +L L+ L L+ NKL+G +P NL+ L + Sbjct: 579 SDNRLTGEIPHSFGDLTRLMELQLGGNLLSENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPASIGNLMSLLI 672 HSP 6 Score: 59.3066 bits (142), Expect = 2.814e-9 Identity = 31/83 (37.35%), Postives = 50/83 (60.24%), Query Frame = -2 Query: 41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289 DN G +P + +L+NL L L N SG+I + LK+LE L L++N +G++P + +LT + ++S N+LTG +PK Sbjct: 459 GDNQLTGSLPIELFNLQNLTALELHQNWLSGNISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPK 541 HSP 7 Score: 56.9954 bits (136), Expect = 1.582e-8 Identity = 34/106 (32.08%), Postives = 48/106 (45.28%), Query Frame = -2 Query: 41 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKS------------------------LNSLTSLKRLDLSYNKLTGFLPK 286 +NYF G IP I L ++ L L +N +G IP + L +D S N L+G +PK L LT L++LDLS N+L G +P+ Sbjct: 268 ENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLEKLDLSINRLNGTIPQ 373 HSP 8 Score: 56.6102 bits (135), Expect = 2.007e-8 Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = -2 Query: 41 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 283 N F G IPS IS +L+ L L N GS+P + L++L L L N LSG++P S+ +++ L+ L L N TG +P+ Sbjct: 197 NGFSGVIPSEISGCESLKVLGLAENLLEGSLPKQLEKLQNLTDLILWQNRLSGEIPPSVGNISRLEVLALHENYFTGSIPR 277 HSP 9 Score: 56.225 bits (134), Expect = 2.808e-8 Identity = 33/81 (40.74%), Postives = 44/81 (54.32%), Query Frame = -2 Query: 44 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 286 DN G+IP I N L +++NS SG IP ++L L L N LSG +P+ L + SL +L L N+LTG LP Sbjct: 388 DNQLEGKIPPLIGFYSNFSVLDMSANSLSGPIPAHFCRFQTLILLSLGSNKLSGNIPRDLKTCKSLTKLMLGDNQLTGSLP 468 HSP 10 Score: 55.0694 bits (131), Expect = 7.052e-8 Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = -2 Query: 14 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELA 283 N G IP + + ++L L+L N +GS+P + L++L L+L N LSG + L L +L+RL L+ N TG +P NL ++ Sbjct: 437 NKLSGNIPRDLKTCKSLTKLMLGDNQLTGSLPIELFNLQNLTALELHQNWLSGNISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIV 526 HSP 11 Score: 54.299 bits (129), Expect = 1.181e-7 Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = -2 Query: 44 IPSSISSLRNLQ-TLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 265 IP + L +LQ +L ++ N+ SG+IPDS+ L+ LE L L+ N LSG++P S+ +L SL ++S N L G +P Sbjct: 611 IPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPASIGNLMSLLICNISNNNLVGTVP 685
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: TD1_MAIZE (Leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 OS=Zea mays GN=TD1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.279e-13 Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = -2 Query: 44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289 +N GRIP++I +L LQTL L SN+FSG +P + L++L L+ S NAL+G +P+ L SL +DLS N LTG +P Sbjct: 475 GNNRIGGRIPAAIGNLPALQTLSLESNNFSGPLPPEIGRLRNLTRLNASGNALTGGIPRELMGCASLGAVDLSRNGLTGEIP 556 HSP 2 Score: 70.8626 bits (172), Expect = 5.109e-13 Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = -2 Query: 44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289 S N G IP + +L + L+ N +G IPD+VT+LK L TL++S N LSG+LP ++ ++TSL LD+SYN+L+G +P Sbjct: 523 SGNALTGGIPRELMGCASLGAVDLSRNGLTGEIPDTVTSLKILCTLNVSRNRLSGELPAAMANMTSLTTLDVSYNQLSGPVP 604 HSP 3 Score: 65.0846 bits (157), Expect = 4.722e-11 Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = -2 Query: 17 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLEL 283 N F G +P I LRNL L + N+ +G IP + SL +DLS N L+G++P ++ SL L L++S N+L+G LP +N+ L Sbjct: 501 NNFSGPLPPEIGRLRNLTRLNASGNALTGGIPRELMGCASLGAVDLSRNGLTGEIPDTVTSLKILCTLNVSRNRLSGELPAAMANMTSL 589 HSP 4 Score: 61.6178 bits (148), Expect = 4.911e-10 Identity = 34/84 (40.48%), Postives = 48/84 (57.14%), Query Frame = -2 Query: 38 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKL 289 + N+ G IP + + RNLQ L+L N F GSIP+S+ K+L + L N L+G +P L L L+L+ N LTG LP + Sbjct: 380 TSNHLTGTIPPDLCAGRNLQLLVLMDNGFFGSIPESLGDCKTLTRVRLGKNFLTGPVPAGLFDLPQANMLELTDNMLTGELPDV 463 HSP 5 Score: 60.8474 bits (146), Expect = 9.444e-10 Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = -2 Query: 44 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 283 N + G +P +L++L L ++S + +G IP + L L+TL L+ N L+G++P L +LTSL+ LDLS N L G +P Sbjct: 238 NQYSGGVPREFGALQSLVRLDMSSCTLTGPIPPELARLSRLDTLFLALNQLTGEIPPELGALTSLRSLDLSINDLAGEIP 317 HSP 6 Score: 57.7658 bits (138), Expect = 1.069e-8 Identity = 32/81 (39.51%), Postives = 46/81 (56.79%), Query Frame = -2 Query: 44 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSH-NALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 283 NYF G IP + L L+ L L N+ SG +P S++ L L + + + N SG +P+ +L SL RLD+S LTG +P Sbjct: 189 NYFNGSIPDTFGDLAALEYLGLNGNALSGRVPPSLSRLSRLREMYVGYYNQYSGGVPREFGALQSLVRLDMSSCTLTGPIP 269 HSP 7 Score: 56.9954 bits (136), Expect = 1.591e-8 Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = -2 Query: 41 RNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLS-YNKLTGFLPK 241 R+L+ L L N F+GSIPD+ L +LE L L+ NALSG++P SL+ L+ L+ + + YN+ +G +P+ Sbjct: 179 RSLRYLHLGGNYFNGSIPDTFGDLAALEYLGLNGNALSGRVPPSLSRLSRLREMYVGYYNQYSGGVPR 246 HSP 8 Score: 55.0694 bits (131), Expect = 6.923e-8 Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = -2 Query: 17 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK----LP-SNLLEL 286 DN G +P ++ L+TL +TSN +G+IP + A ++L+ L L N G +P+SL +L R+ L N LTG +P LP +N+LEL Sbjct: 357 DNNLTGPLPPALGRNGRLKTLDVTSNHLTGTIPPDLCAGRNLQLLVLMDNGFFGSIPESLGDCKTLTRVRLGKNFLTGPVPAGLFDLPQANMLEL 451
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.542e-13 Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = -2 Query: 41 ITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQT-LILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 370 + LD +SG L + +L++L L LS N G IP I L++LQ+ L L+ N+F+G IP ++ L LETLDLSHN L+G++P S+ + SL L++S+N L G L K Sbjct: 724 LNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTGEIPVEIGQLQDLQSALDLSYNNFTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKSLGYLNVSFNNLGGKLKK 834 HSP 2 Score: 68.1662 bits (165), Expect = 4.458e-12 Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = -2 Query: 2 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKL---PSNLLELALKAN 289 ++N G IP+ + L NL+ L L +NS +G IP + + L+ L L N L G +PKSL L +L+ LDLS N LTG +P+ S LL+L L N Sbjct: 223 AENMLNGTIPAELGRLENLEILNLANNSLTGEIPSQLGEMSQLQYLSLMANQLQGLIPKSLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANN 321 HSP 3 Score: 65.0846 bits (157), Expect = 4.951e-11 Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = -2 Query: 11 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 286 +N G + SIS+L NLQ L+L N+ G +P ++AL+ LE L L N SG++P+ + + TSLK +D+ N G +P L EL L Sbjct: 393 NNTLEGTLSPSISNLTNLQWLVLYHNNLEGKLPKEISALRKLEVLFLYENRFSGEIPQEIGNCTSLKMIDMFGNHFEGEIPPSIGRLKELNL 484 HSP 4 Score: 63.929 bits (154), Expect = 1.015e-10 Identity = 36/78 (46.15%), Postives = 47/78 (60.26%), Query Frame = -2 Query: 53 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTG 286 N G +P+S+ + L L L N SGSIP S LK LE L L +N+L G LP SL SL +L R++LS+N+L G Sbjct: 489 QNELVGGLPASLGNCHQLNILDLADNQLSGSIPSSFGFLKGLEQLMLYNNSLQGNLPDSLISLRNLTRINLSHNRLNG 566 HSP 5 Score: 63.1586 bits (152), Expect = 1.695e-10 Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = -2 Query: 41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289 ++N G IPS + + LQ L L +N G IP S+ L +L+TLDLS N L+G++P+ +++ L L L+ N L+G LPK Sbjct: 247 ANNSLTGEIPSQLGEMSQLQYLSLMANQLQGLIPKSLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANNHLSGSLPK 329 HSP 6 Score: 63.1586 bits (152), Expect = 2.171e-10 Identity = 29/83 (34.94%), Postives = 50/83 (60.24%), Query Frame = -2 Query: 41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289 DNY G IP+ + + +L N +G+IP + L++LE L+L++N+L+G++P L ++ L+ L L N+L G +PK Sbjct: 199 QDNYLEGPIPAELGNCSDLTVFTAAENMLNGTIPAELGRLENLEILNLANNSLTGEIPSQLGEMSQLQYLSLMANQLQGLIPK 281 HSP 7 Score: 60.8474 bits (146), Expect = 9.800e-10 Identity = 39/116 (33.62%), Postives = 61/116 (52.59%), Query Frame = -2 Query: 11 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSG-----------------------KLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 289 +DN G IPSS L+ L+ L+L +NS G++PDS+ +L++L ++LSHN L+G ++P L + +L RL L N+LTG +P + EL+L Sbjct: 512 ADNQLSGSIPSSFGFLKGLEQLMLYNNSLQGNLPDSLISLRNLTRINLSHNRLNGTIHPLCGSSSYLSFDVTNNGFEDEIPLELGNSQNLDRLRLGKNQLTGKIPWTLGKIRELSL 627 HSP 8 Score: 60.4622 bits (145), Expect = 1.333e-9 Identity = 35/81 (43.21%), Postives = 46/81 (56.79%), Query Frame = -2 Query: 44 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKR-LDLSYNKLTGFLP 283 N G IP I +L L L L N FSGS+P ++ L L L LS N+L+G++P + L L+ LDLSYN TG +P Sbjct: 705 NSLNGSIPQEIGNLGALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTGEIPVEIGQLQDLQSALDLSYNNFTGDIP 785 HSP 9 Score: 58.151 bits (139), Expect = 8.443e-9 Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = -2 Query: 44 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSL-NSLTSLKRLDLSYNKLTGFLP 283 N G IP S++ L NLQTL L++N+ +G IP+ + L L L++N LSG LPKS+ ++ T+L++L LS +L+G +P Sbjct: 273 NQLQGLIPKSLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANNHLSGSLPKSICSNNTNLEQLVLSGTQLSGEIP 353 HSP 10 Score: 57.3806 bits (137), Expect = 1.169e-8 Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 29 CSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSN 400 CS + T + Q+ L SG++ +S+ L LDLS+N G IP ++ L L L L +N+ G++ S++ L +L+ L L HN L GKLPK +++L L+ L L N+ +G +P+ N Sbjct: 332 CS-NNTNLEQLVLSGTQLSGEIPVELSKCQSLKQLDLSNNSLAGSIPEALFELVELTDLYLHNNTLEGTLSPSISNLTNLQWLVLYHNNLEGKLPKEISALRKLEVLFLYENRFSGEIPQEIGN 454 HSP 11 Score: 57.3806 bits (137), Expect = 1.232e-8 Identity = 37/92 (40.22%), Postives = 55/92 (59.78%), Query Frame = -2 Query: 17 SDNYFFGRIPSSI-SSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLEL 289 ++N+ G +P SI S+ NL+ L+L+ SG IP ++ +SL+ LDLS+N+L+G +P++L L L L L N L G L SNL L Sbjct: 319 ANNHLSGSLPKSICSNNTNLEQLVLSGTQLSGEIPVELSKCQSLKQLDLSNNSLAGSIPEALFELVELTDLYLHNNTLEGTLSPSISNLTNL 410 HSP 12 Score: 56.9954 bits (136), Expect = 1.707e-8 Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = -2 Query: 44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289 S N F +P+ + + L L L NS +GSIP + L +L L+L N SG LP+++ L+ L L LS N LTG +P Sbjct: 679 SSNQFVESLPTELFNCTKLLVLSLDGNSLNGSIPQEIGNLGALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTGEIP 760 HSP 13 Score: 55.0694 bits (131), Expect = 6.704e-8 Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = -2 Query: 26 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNL 283 N G+IP ++ +R L L ++SN+ +G+IP + K L +DL++N LSG +P L L+ L L LS N+ F+ LP+ L Sbjct: 609 NQLTGKIPWTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNFLSGPIPPWLGKLSQLGELKLSSNQ---FVESLPTEL 691 HSP 14 Score: 53.1434 bits (126), Expect = 3.099e-7 Identity = 29/60 (48.33%), Postives = 38/60 (63.33%), Query Frame = -2 Query: 110 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKS 289 S N F G IPS+I +L L+TL L+ N +G +P SV +KSL L++S N L GKL K Sbjct: 776 SYNNFTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKSLGYLNVSFNNLGGKLKKQ 835 HSP 15 Score: 51.6026 bits (122), Expect = 8.878e-7 Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = -2 Query: 2 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP----KLPSNLLELALKAN 289 ++N F IP + + +NL L L N +G IP ++ ++ L LD+S NAL+G +P L L +DL+ N L+G +P KL S L EL L +N Sbjct: 583 TNNGFEDEIPLELGNSQNLDRLRLGKNQLTGKIPWTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNFLSGPIPPWLGKL-SQLGELKLSSN 681
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.887e-13 Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = -2 Query: 41 SDNYFFGRIPSSISSLRNLQT-LILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289 S N G IP I L++LQ+ L L+ N+F+G IP +++ L LE+LDLSHN L G++P + + SL L+LSYN L G L K Sbjct: 752 SRNALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTLPKLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGKLKK 835 HSP 2 Score: 69.3218 bits (168), Expect = 1.885e-12 Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = -2 Query: 44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289 S N F G +P+ I SL N+ TL L NS +GSIP + L++L L+L N LSG LP ++ L+ L L LS N LTG +P Sbjct: 680 SSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEENQLSGPLPSTIGKLSKLFELRLSRNALTGEIP 761 HSP 3 Score: 68.1662 bits (165), Expect = 5.195e-12 Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = -2 Query: 47 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFL 283 N G +P+ ++ L+NLQTL L NSFSG IP + L S++ L+L N L G +PK L L +L+ LDLS N LTG + Sbjct: 226 NRLNGSLPAELNRLKNLQTLNLGDNSFSGEIPSQLGDLVSIQYLNLIGNQLQGLIPKRLTELANLQTLDLSSNNLTGVI 304 HSP 4 Score: 63.1586 bits (152), Expect = 2.172e-10 Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = -2 Query: 41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289 DN F G IPS + L ++Q L L N G IP +T L +L+TLDLS N L+G + + + L+ L L+ N+L+G LPK Sbjct: 248 GDNSFSGEIPSQLGDLVSIQYLNLIGNQLQGLIPKRLTELANLQTLDLSSNNLTGVIHEEFWRMNQLEFLVLAKNRLSGSLPK 330 HSP 5 Score: 60.4622 bits (145), Expect = 1.243e-9 Identity = 33/83 (39.76%), Postives = 54/83 (65.06%), Query Frame = -2 Query: 41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289 S+ G IP+ IS+ ++L+ L L++N+ +G IPDS+ L L L L++N+L G L S+++LT+L+ L +N L G +PK Sbjct: 345 SETQLSGEIPAEISNCQSLKLLDLSNNTLTGQIPDSLFQLVELTNLYLNNNSLEGTLSSSISNLTNLQEFTLYHNNLEGKVPK 427 HSP 6 Score: 59.6918 bits (143), Expect = 2.602e-9 Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = -2 Query: 14 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELA 289 DN G IP+ I + +L N +GS+P + LK+L+TL+L N+ SG++P L L S++ L+L N+L G +PK L ELA Sbjct: 200 QDNELEGPIPAEIGNCTSLALFAAAFNRLNGSLPAELNRLKNLQTLNLGDNSFSGEIPSQLGDLVSIQYLNLIGNQLQGLIPK---RLTELA 288 HSP 7 Score: 59.6918 bits (143), Expect = 2.719e-9 Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = -2 Query: 11 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSL-NSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 283 N G IP ++ L NLQTL L+SN+ +G I + + LE L L+ N LSG LPK++ ++ TSLK+L LS +L+G +P SN L L Sbjct: 274 NQLQGLIPKRLTELANLQTLDLSSNNLTGVIHEEFWRMNQLEFLVLAKNRLSGSLPKTICSNNTSLKQLFLSETQLSGEIPAEISNCQSLKL 365 HSP 8 Score: 58.9214 bits (141), Expect = 3.898e-9 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = -2 Query: 2 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP----KLPSNLLELALKAN 289 ++NY G IP+ + L L L L+SN F GS+P + +L ++ TL L N+L+G +P+ + +L +L L+L N+L+G LP KL S L EL L N Sbjct: 656 NNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEENQLSGPLPSTIGKL-SKLFELRLSRN 754 HSP 9 Score: 56.9954 bits (136), Expect = 1.663e-8 Identity = 39/100 (39.00%), Postives = 53/100 (53.00%), Query Frame = -2 Query: 2 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP----KLPSNLLELALKAN 289 ++N F G IP + NL L L N F+G IP + + L LD+S N+LSG +P L L +DL+ N L+G +P KLP L EL L +N Sbjct: 584 TENGFEGDIPLELGKSTNLDRLRLGKNQFTGRIPRTFGKISELSLLDISRNSLSGIIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPL-LGELKLSSN 682 HSP 10 Score: 56.9954 bits (136), Expect = 1.678e-8 Identity = 29/82 (35.37%), Postives = 46/82 (56.10%), Query Frame = -2 Query: 44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289 ++N G + SSIS+L NLQ L N+ G +P + L LE + L N SG++P + + T L+ +D N+L+G +P Sbjct: 393 NNNSLEGTLSSSISNLTNLQEFTLYHNNLEGKVPKEIGFLGKLEIMYLYENRFSGEMPVEIGNCTRLQEIDWYGNRLSGEIP 474 HSP 11 Score: 56.9954 bits (136), Expect = 1.931e-8 Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = -2 Query: 44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289 S+N G+IP S+ L L L L +NS G++ S++ L +L+ L HN L GK+PK + L L+ + L N+ +G +P Sbjct: 369 SNNTLTGQIPDSLFQLVELTNLYLNNNSLEGTLSSSISNLTNLQEFTLYHNNLEGKVPKEIGFLGKLEIMYLYENRFSGEMP 450 HSP 12 Score: 56.6102 bits (135), Expect = 2.018e-8 Identity = 29/80 (36.25%), Postives = 42/80 (52.50%), Query Frame = -2 Query: 44 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 283 N G++P I L L+ + L N FSG +P + L+ +D N LSG++P S+ L L RL L N+L G +P Sbjct: 419 NNLEGKVPKEIGFLGKLEIMYLYENRFSGEMPVEIGNCTRLQEIDWYGNRLSGEIPSSIGRLKDLTRLHLRENELVGNIP 498 HSP 13 Score: 56.225 bits (134), Expect = 2.629e-8 Identity = 39/97 (40.21%), Postives = 50/97 (51.55%), Query Frame = -2 Query: 2 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLP---SNLLELALKAN 283 N F GRIP + + L L ++ NS SG IP + K L +DL++N LSG +P L L L L LS NK G LP +N+L L L N Sbjct: 610 NQFTGRIPRTFGKISELSLLDISRNSLSGIIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFSLTNILTLFLDGN 706 HSP 14 Score: 55.8398 bits (133), Expect = 4.504e-8 Identity = 30/78 (38.46%), Postives = 44/78 (56.41%), Query Frame = -2 Query: 53 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTG 286 +N G IP+S+ + + + L N SGSIP S L +LE + +N+L G LP SL +L +L R++ S NK G Sbjct: 490 ENELVGNIPASLGNCHQMTVIDLADNQLSGSIPSSFGFLTALELFMIYNNSLQGNLPDSLINLKNLTRINFSSNKFNG 567 HSP 15 Score: 55.0694 bits (131), Expect = 6.949e-8 Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = -2 Query: 107 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSL 289 S N F GRIPS+IS+L L++L L+ N G +P + +KSL L+LS+N L GKL K Sbjct: 777 SYNNFTGRIPSTISTLPKLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGKLKKQF 837 HSP 16 Score: 55.0694 bits (131), Expect = 8.078e-8 Identity = 32/80 (40.00%), Postives = 43/80 (53.75%), Query Frame = -2 Query: 44 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 283 N G IPSSI L++L L L N G+IP S+ + +DL+ N LSG +P S LT+L+ + N L G LP Sbjct: 467 NRLSGEIPSSIGRLKDLTRLHLRENELVGNIPASLGNCHQMTVIDLADNQLSGSIPSSFGFLTALELFMIYNNSLQGNLP 546 HSP 17 Score: 54.6842 bits (130), Expect = 1.036e-7 Identity = 32/82 (39.02%), Postives = 42/82 (51.22%), Query Frame = -2 Query: 44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289 DN G IP + +L NLQ L L S +G IP L L+TL L N L G +P + + TSL ++N+L G LP Sbjct: 152 GDNELNGTIPETFGNLVNLQMLALASCRLTGLIPSRFGRLVQLQTLILQDNELEGPIPAEIGNCTSLALFAAAFNRLNGSLP 233 HSP 18 Score: 53.1434 bits (126), Expect = 2.662e-7 Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = -2 Query: 5 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKA 283 N G IPS + SL NL++L L N +G+IP++ L +L+ L L+ L+G +P L L+ L L N+L G +P N LAL A Sbjct: 130 NLLSGDIPSQLGSLVNLKSLKLGDNELNGTIPETFGNLVNLQMLALASCRLTGLIPSRFGRLVQLQTLILQDNELEGPIPAEIGNCTSLALFA 222 HSP 19 Score: 53.1434 bits (126), Expect = 3.128e-7 Identity = 35/116 (30.17%), Postives = 54/116 (46.55%), Query Frame = -2 Query: 11 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLE-----------------------TLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 289 +DN G IPSS L L+ ++ +NS G++PDS+ LK+L + D++ N G +P L T+L RL L N+ TG +P+ + EL+L Sbjct: 513 ADNQLSGSIPSSFGFLTALELFMIYNNSLQGNLPDSLINLKNLTRINFSSNKFNGSISPLCGSSSYLSFDVTENGFEGDIPLELGKSTNLDRLRLGKNQFTGRIPRTFGKISELSL 628
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: PLRX3_ARATH (Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana GN=PEX3 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.010e-13 Identity = 34/83 (40.96%), Postives = 49/83 (59.04%), Query Frame = -2 Query: 41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289 + N F G IP SI +++NL +I NS G P + L ++ D S N+ +G LP S LTS++ D+S NKLTGF+P+ Sbjct: 234 AHNKFSGCIPRSIGNMKNLNEIIFKDNSLGGCFPSEIGKLANVNVFDASMNSFTGVLPPSFVGLTSMEEFDISGNKLTGFIPE 316 HSP 2 Score: 55.8398 bits (133), Expect = 3.498e-8 Identity = 29/78 (37.18%), Postives = 41/78 (52.56%), Query Frame = -2 Query: 53 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTG 286 DN G PS I L N+ + NSF+G +P S L S+E D+S N L+G +P+++ L L L +YN G Sbjct: 259 DNSLGGCFPSEIGKLANVNVFDASMNSFTGVLPPSFVGLTSMEEFDISGNKLTGFIPENICKLPKLVNLTYAYNYFNG 336 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0005130 ID=g.arboreum_cottongen_reftransV1_0005130; Name=g.arboreum_cottongen_reftransV1_0005130; organism=Gossypium arboreum; type=contig; length=533bpback to top |