g.arboreum_cottongen_reftransV1_0005130, g.arboreum_cottongen_reftransV1_0005130 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0005130
Unique Name	g.arboreum_cottongen_reftransV1_0005130
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	533

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr7	chromosome	g.arboreum_cottongen_reftransV1_0005130:1..533 . Chr7:38755950..38756482 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: D7L3K9_ARALL (Leucine-rich repeat family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_899749 PE=4 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 7.895e-60
Identity = 123/178 (69.10%), Postives = 156/178 (87.64%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFK+++K +SIP WSCLASWDF+  DPCA P RT F CG++CS D+TR+TQ+TLDP GY+G+LTPLIS LT+L TLDL++N F+G IPSSISSL +L+TLIL SNS SGS+PDSVT L SLE++D+SHN+L+G LPK++NSL++L++LDLSYNKLTG +PKLP NL++LALKAN
Sbjct:   32 SALKAFKATVKPNSIPPWSCLASWDFTVSDPCASPRRTHFTCGITCSSDSTRVTQLTLDPAGYTGRLTPLISGLTELLTLDLAENNFYGLIPSSISSLHSLKTLILRSNSLSGSLPDSVTRLNSLESIDISHNSLTGSLPKTMNSLSNLRQLDLSYNKLTGAIPKLPRNLIDLALKAN 209

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: R0I3Z7_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10016003mg PE=4 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.001e-58
Identity = 123/178 (69.10%), Postives = 154/178 (86.52%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFK+++K +SIP WSCLASWDF+  DPCA P RT F CG++CS D+TR+ Q+TLDP GY+G+LTPLIS LT+L TLDL++N F+G IPSSISSL +L+TLIL SNSFSGSIPDSVT L SLE++D+S N+L+G LPK++NSL +L++LDLSYNKLTG +PKLP NL++LALKAN
Sbjct:   28 SALKAFKATVKPNSIPPWSCLASWDFTVSDPCASPRRTHFTCGITCSSDSTRVIQLTLDPAGYTGRLTPLISGLTELLTLDLAENNFYGVIPSSISSLVSLKTLILRSNSFSGSIPDSVTKLNSLESIDISRNSLTGSLPKTMNSLLNLRQLDLSYNKLTGAIPKLPRNLIDLALKAN 205

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BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: V4UAC0_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10030023mg PE=4 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.480e-58
Identity = 132/178 (74.16%), Postives = 151/178 (84.83%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFK+SIK SSI  WSCLASWDF+  DPCA+P RT F CG+ CS D+TR+TQ+TLDP GYSGQLTPLISQLTQLT LDLSDNYFFG IP+SISSL NLQ L L SNSFS S+PDS+T LK+L++LDLS+N+LSG LPK+   ++SL+RLDLSYNKLTG LPKLP NL ELALK N
Sbjct:   10 SALKAFKASIKPSSIQPWSCLASWDFTATDPCALPRRTHFTCGLLCSSDSTRVTQLTLDPAGYSGQLTPLISQLTQLTILDLSDNYFFGPIPASISSLSNLQMLTLRSNSFSSSVPDSLTQLKNLDSLDLSYNSLSGSLPKNTFLMSSLRRLDLSYNKLTGSLPKLPPNLSELALKNN 187

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: A0A067F128_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016534mg PE=4 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.706e-58
Identity = 132/178 (74.16%), Postives = 151/178 (84.83%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFK+SIK SSI  WSCLASWDF+  DPCA+P RT F CG+ CS D+TR+TQ+TLDP GYSGQLTPLISQLTQLT LDLSDNYFFG IP+SISSL NLQ L L SNSFS S+PDS+T LK+L++LDLS+N+LSG LPK+   ++SL+RLDLSYNKLTG LPKLP NL ELALK N
Sbjct:   33 SALKAFKASIKPSSIQPWSCLASWDFTATDPCALPRRTHFTCGLLCSSDSTRVTQLTLDPAGYSGQLTPLISQLTQLTILDLSDNYFFGPIPASISSLSNLQMLTLRSNSFSSSVPDSLTQLKNLDSLDLSYNSLSGSLPKNTFLMSSLRRLDLSYNKLTGSLPKLPPNLSELALKNN 210

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: A0A067LRA0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22135 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 3.517e-56
Identity = 134/177 (75.71%), Postives = 150/177 (84.75%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFK+SIK +SIP WSCLASWDF+ DPCA P RT F CGV+CS D+TR+TQ+TLDP+GYSGQLTPLISQLT L  LDLSDN FFG IPSSISSL NLQTL L SN FSGS+PDSVT LKSL++LDLSHN+LSG LP  +N ++SL RLDLSYNKLT  LPKLP NLLELA+K N
Sbjct:   33 SALKAFKASIKPNSIPPWSCLASWDFTTDPCAFPRRTHFTCGVTCSSDSTRVTQLTLDPVGYSGQLTPLISQLTNLVILDLSDNNFFGPIPSSISSLSNLQTLTLRSNLFSGSVPDSVTKLKSLQSLDLSHNSLSGYLPNGMNLMSSLTRLDLSYNKLTASLPKLPPNLLELAIKGN 209

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: F6I5Y7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0180g00090 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.331e-55
Identity = 116/177 (65.54%), Postives = 148/177 (83.62%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SAL++FK+SIK SS+  WSCLASW+FS DPC+VP RT F CG+SCS D+TR+  ITLDP GY+G L+P I++LTQLT LDLSDN   G +PS++SSL NLQ L L SNSFSG +P ++TA+KSLE+LD+SHN LSG LPK++ SL+SL+RLDLS+N++TG LPKLPS+L ELAL++N
Sbjct:   94 SALQSFKASIKPSSVSPWSCLASWNFSTDPCSVPRRTHFTCGISCSADSTRVISITLDPAGYAGALSPAIAKLTQLTVLDLSDNSLSGYVPSALSSLSNLQILTLRSNSFSGPLPQAITAIKSLESLDISHNFLSGSLPKTMVSLSSLRRLDLSFNRITGTLPKLPSSLSELALRSN 270

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: A0A0B2PGK8_GLYSO (DNA-damage-repair/toleration protein DRT100 OS=Glycine soja GN=glysoja_021305 PE=4 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.314e-55
Identity = 128/177 (72.32%), Postives = 153/177 (86.44%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            +ALKAFK+SIK SSI  WSCLASW+F+ DPC++P  T FICG++C+ D+TRI QITLDP GYSG LTPLISQLTQLTTLDL++N  FG IPSSISSL NLQTL L SNSFSG+IP S+T  KSL++LDL+HN+LSG LP S+NSLT+L+RLDLS+N+LTG +PKLP NLLELA+KAN
Sbjct:   34 AALKAFKASIKPSSITQWSCLASWNFTTDPCSLPRHTSFICGLTCTQDSTRINQITLDPAGYSGTLTPLISQLTQLTTLDLAENNLFGPIPSSISSLSNLQTLTLRSNSFSGTIPSSITTFKSLQSLDLAHNSLSGYLPNSMNSLTTLRRLDLSFNRLTGSIPKLPPNLLELAIKAN 210

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: A0A087HD06_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G318100 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 8.467e-55
Identity = 128/178 (71.91%), Postives = 153/178 (85.96%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFK++IK +SIP WSCLASWDF+  DPC  P RT F CG++CS D+TR+TQ+TLDP GYSG LTPLIS LTQL TLDL+DN F G+IPSS+SSL NL+TLIL SN FSGSIPDS+T L SLE+LD+SHN L+G LPK++NSL++L++LDLSYNKLTG +PKLPSNLL LALK+N
Sbjct:   27 SALKAFKAAIKPNSIPQWSCLASWDFTTSDPCTSPRRTHFTCGITCSSDSTRVTQLTLDPAGYSGHLTPLISSLTQLLTLDLADNNFSGQIPSSLSSLLNLKTLILRSNLFSGSIPDSLTHLNSLESLDISHNFLTGSLPKTINSLSNLRQLDLSYNKLTGTIPKLPSNLLTLALKSN 204

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: I1LEK4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.542e-54
Identity = 129/177 (72.88%), Postives = 154/177 (87.01%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            +ALKAFK+SIK SSI  WSCLASW+F+ DPC++P RT FICG++C+ D+TRI QITLDP GYSG LTPLISQLTQLTTLDL++N  FG IPSSISSL NLQTL L SNSFSG+IP S+T  KSL++LDL+HN+LSG LP S+NSLT+L+RLDLS+N+LTG +PKLP NLLELA+KAN
Sbjct:   34 AALKAFKASIKPSSITQWSCLASWNFTTDPCSLPRRTSFICGLTCTQDSTRINQITLDPAGYSGTLTPLISQLTQLTTLDLAENNLFGPIPSSISSLSNLQTLTLRSNSFSGTIPSSITTFKSLQSLDLAHNSLSGYLPNSMNSLTTLRRLDLSFNRLTGSIPKLPPNLLELAIKAN 210

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: C0L2V1_ARAHY (Putative disease resistance protein OS=Arachis hypogaea PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.252e-54
Identity = 128/176 (72.73%), Postives = 150/176 (85.23%), Query Frame = -2

Query:    2 ALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 529
            ALKAFK+SIK SSI  WSC+ASW+F+ DPC+VP RT F CG++C+ D TRI QITLDP GY+G LTPL+SQLT L TLDLSDN F+G IPSS+SSL  LQTL L SNSFSGSIP S+T LKSL++LDLS N+LSG LPKS+NSLTSL+R+DLS+NKLTG LPKLP NLL+LA+KAN
Sbjct:   36 ALKAFKASIKPSSITPWSCIASWNFTTDPCSVPRRTHFTCGLTCTADNTRINQITLDPAGYTGTLTPLVSQLTSLITLDLSDNSFYGTIPSSLSSLSKLQTLSLRSNSFSGSIPPSITTLKSLQSLDLSQNSLSGFLPKSMNSLTSLRRMDLSFNKLTGGLPKLPPNLLDLAIKAN 211

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: Y4052_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana GN=At4g30520 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 9.161e-17
Identity = 62/155 (40.00%), Postives = 86/155 (55.48%), Query Frame = -2

Query:   14 CLASWD-FSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELA 475
             L +WD FS DPC+          ++CSPD   +  +       SG L+  I  LT L  + L +N   G+IP  +  L  LQTL L++N FSG IP S+  L SL+ L L++N+LSG  P SL+ +  L  LDLSYN L+G +PK P+    +A
Sbjct:   54 ALNNWDEFSVDPCS-------WAMITCSPD-NLVIGLGAPSQSLSGGLSESIGNLTNLRQVSLQNNNISGKIPPELGFLPKLQTLDLSNNRFSGDIPVSIDQLSSLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLSGPVPKFPARTFNVA 200

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.241e-16
Identity = 63/155 (40.65%), Postives = 84/155 (54.19%), Query Frame = -2

Query:   14 CLASWD-FSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELA 475
               +WD FS DPC+          +SCS D   +  +       SG L+  I  LT L  + L +N   G+IP  I SL  LQTL L++N FSG IP SV  L +L+ L L++N+LSG  P SL+ +  L  LDLSYN L G +PK P+    +A
Sbjct:   51 VFKNWDEFSVDPCSWTM-------ISCSSD-NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLRGPVPKFPARTFNVA 197

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: Y1668_ARATH (Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 OS=Arabidopsis thaliana GN=At1g66830 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.956e-15
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = -2

Query:   17 CLASWDFSD-DPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK-LPSNLLEL 475
               +W+ SD +PC+         GV+C+ D  R+  I L     SG L P I  L  L  ++L DN F G++P  +  L+ LQ+L+L+ NSFSG +P+ + +LKSL TLDLS N+ +G +  SL     LK L LS N  +G LP  L SNL+ L
Sbjct:   43 VFTNWNSSDSNPCSWQ-------GVTCNYD-MRVVSIRLPNKRLSGSLDPSIGSLLSLRHINLRDNDFQGKLPVELFGLKGLQSLVLSGNSFSGFVPEEIGSLKSLMTLDLSENSFNGSISLSLIPCKKLKTLVLSKNSFSGDLPTGLGSNLVHL 189

HSP 2 Score: 68.5514 bits (166), Expect = 2.482e-12
Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -2

Query:   38 SDNYFFGRIPSSI-SSLRNLQTLILTSNSFSGSIPDSVTALKSLE-TLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKL 289
            S N F G +P+ + S+L +L+TL L+ N  +G+IP+ V +L++L+ TLDLSHN  SG +P SL +L  L  +DLSYN L+G +PK 
Sbjct:  170 SKNSFSGDLPTGLGSNLVHLRTLNLSFNRLTGTIPEDVGSLENLKGTLDLSHNFFSGMIPTSLGNLPELLYVDLSYNNLSGPIPKF 255

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.740e-15
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = -2

Query:   53 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTG 289
            S+N   G +P S+S ++NLQ++ L  N  +G +PD    L  LETLD S N LSGKLP+S  +LTSLK+L L  N+ TG
Sbjct:  122 SENELDGNVPYSLSQMKNLQSINLGQNKLNGELPDMFQKLSKLETLDFSLNKLSGKLPQSFANLTSLKKLHLQDNRFTG 200

HSP 2 Score: 60.4622 bits (145), Expect = 1.118e-9
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = -2

Query:   17 DPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLEL 448
            DPC          GV C    + +T++ L      G    L+S L  LTT DLS N   G IP  +    N+  L  + N   G++P S++ +K+L++++L  N L+G+LP     L+ L+ LD S NKL+G LP+  +NL  L
Sbjct:   54 DPCEDSWE-----GVKCK--GSSVTELQLSGFELGGSRGYLLSNLKSLTTFDLSKNNLKGNIPYQLPP--NIANLDFSENELDGNVPYSLSQMKNLQSINLGQNKLNGELPDMFQKLSKLETLDFSLNKLSGKLPQSFANLTSL 188

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: PGIP1_ORYSJ (Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica GN=FOR1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.890e-15
Identity = 36/76 (47.37%), Postives = 56/76 (73.68%), Query Frame = -2

Query:   44 GRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 271
            G IP+ +++L NLQ L ++  + SG IPDS+  ++SL+++DLSHN+L+G +P S + L +L+ LDL  NKLTG +P
Sbjct:  110 GPIPACLTALSNLQFLTISHTNVSGVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLPNLRSLDLRSNKLTGCIP 185

HSP 2 Score: 59.3066 bits (142), Expect = 1.383e-9
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = -2

Query:    2 NYFFGRIPSSISSLRNLQTL-ILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK----LPSNLLELALKAN 283
            N   G+IPS+++ L  L +L +      SG IP  +TAL +L+ L +SH  +SG +P SL  + SL  +DLS+N LTG +P     LP NL  L L++N
Sbjct:   81 NDVRGQIPSAVAGLTALMSLSLFRLPGLSGPIPACLTALSNLQFLTISHTNVSGVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLP-NLRSLDLRSN 178

HSP 3 Score: 57.7658 bits (138), Expect = 4.740e-9
Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = -2

Query:   41 GRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 271
            G IP S++ +R+L ++ L+ NS +G IP+S + L +L +LDL  N L+G +P  L      + L LSYN+LTG +P+
Sbjct:  134 GVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLPNLRSLDLRSNKLTGCIPAGLVQ-GQFRSLILSYNQLTGPIPR 209

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: PII2_ARATH (Piriformospora indica-insensitive protein 2 OS=Arabidopsis thaliana GN=PII-2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.181e-14
Identity = 40/82 (48.78%), Postives = 52/82 (63.41%), Query Frame = -2

Query:   41 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 286
            +N F G +P+SI +L+ L+ L+   NSF+G IP+    LK L  LDLS N+ SG LP S   L SL +LDLS N L G LP+
Sbjct:  176 ENGFSGELPASICNLKRLKRLVFAGNSFAGMIPNCFKGLKELLILDLSRNSFSGTLPTSFGDLVSLLKLDLSNNLLEGNLPQ 257

HSP 2 Score: 65.4698 bits (158), Expect = 1.962e-11
Identity = 58/160 (36.25%), Postives = 80/160 (50.00%), Query Frame = -2

Query:    2 LASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSN---LLELALKAN 472
            L S +F  +P  +      I       + T++  + +   G+SG+L   I  L +L  L  + N F G IP+    L+ L  L L+ NSFSG++P S   L SL  LDLS+N L G LP+ L  L +L  LDL  N+ +G L K   N   L EL L  N
Sbjct:  144 LESLEFRSNPGLIGELPETI------GNLTKLKSLVVLENGFSGELPASICNLKRLKRLVFAGNSFAGMIPNCFKGLKELLILDLSRNSFSGTLPTSFGDLVSLLKLDLSNNLLEGNLPQELGFLKNLTLLDLRNNRFSGGLSKNIENIQSLTELVLSNN 297

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.818e-14
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            ++N   G I   I  L+ L  L L+ N+F+G+IPDS++ L +LE LDLS+N L G +P S  SLT L R  ++YN+LTG +P
Sbjct:  544 NNNRLNGTILPEIGRLKELHMLDLSRNNFTGTIPDSISGLDNLEVLDLSYNHLYGSIPLSFQSLTFLSRFSVAYNRLTGAIP 625

HSP 2 Score: 61.6178 bits (148), Expect = 4.966e-10
Identity = 33/79 (41.77%), Postives = 48/79 (60.76%), Query Frame = -2

Query:   53 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTG 289
            S NY  G +  ++S+L  L++L+++ N FS  IPD    L  LE LD+S N  SG+ P SL+  + L+ LDL  N L+G
Sbjct:  240 SGNYLSGELSKNLSNLSGLKSLLISENRFSDVIPDVFGNLTQLEHLDVSSNKFSGRFPPSLSQCSKLRVLDLRNNSLSG 318

HSP 3 Score: 56.9954 bits (136), Expect = 1.576e-8
Identity = 32/91 (35.16%), Postives = 55/91 (60.44%), Query Frame = -2

Query:   17 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLEL 289
            S N   G +    +  +++Q L + SN  +G +PD + +++ LE L LS N LSG+L K+L++L+ LK L +S N+ +  +P +  NL +L
Sbjct:  192 SMNRLVGNLDGLYNCSKSIQQLHIDSNRLTGQLPDYLYSIRELEQLSLSGNYLSGELSKNLSNLSGLKSLLISENRFSDVIPDVFGNLTQL 282

HSP 4 Score: 56.6102 bits (135), Expect = 2.244e-8
Identity = 37/88 (42.05%), Postives = 46/88 (52.27%), Query Frame = -2

Query:   26 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNL 289
            S N F GR P S+S    L+ L L +NS SGSI  + T    L  LDL+ N  SG LP SL     +K L L+ N+  G +P    NL
Sbjct:  288 SSNKFSGRFPPSLSQCSKLRVLDLRNNSLSGSINLNFTGFTDLCVLDLASNHFSGPLPDSLGHCPKMKILSLAKNEFRGKIPDTFKNL 375

HSP 5 Score: 53.9138 bits (128), Expect = 1.435e-7
Identity = 30/82 (36.59%), Postives = 42/82 (51.22%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S N+    IP++++   NL  L L +    G IP  +   K LE LDLS N   G +P  +  + SL  +D S N LTG +P
Sbjct:  410 SKNFIGEEIPNNVTGFDNLAILALGNCGLRGQIPSWLLNCKKLEVLDLSWNHFYGTIPHWIGKMESLFYIDFSNNTLTGAIP 491

HSP 6 Score: 53.5286 bits (127), Expect = 2.410e-7
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S+N F   IP    +L  L+ L ++SN FSG  P S++    L  LDL +N+LSG +  +    T L  LDL+ N  +G LP
Sbjct:  264 SENRFSDVIPDVFGNLTQLEHLDVSSNKFSGRFPPSLSQCSKLRVLDLRNNSLSGSINLNFTGFTDLCVLDLASNHFSGPLP 345

HSP 7 Score: 51.6026 bits (122), Expect = 8.507e-7
Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = -2

Query:   44 TLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 229
            ++ L +N  +G+I   +  LK L  LDLS N  +G +P S++ L +L+ LDLSYN L G +P
Sbjct:  540 SIYLNNNRLNGTILPEIGRLKELHMLDLSRNNFTGTIPDSISGLDNLEVLDLSYNHLYGSIP 601

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: EMS1_ARATH (Leucine-rich repeat receptor protein kinase EMS1 OS=Arabidopsis thaliana GN=EMS1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.481e-14
Identity = 41/76 (53.95%), Postives = 51/76 (67.11%), Query Frame = -2

Query:   44 GRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 271
            G+IP  ISSL+NL+ L L  N FSG IP  +  LK L+TLDLS N+L+G LP+ L+ L  L  LDLS N  +G LP
Sbjct:   79 GQIPKEISSLKNLRELCLAGNQFSGKIPPEIWNLKHLQTLDLSGNSLTGLLPRLLSELPQLLYLDLSDNHFSGSLP 154

HSP 2 Score: 67.3958 bits (163), Expect = 8.306e-12
Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = -2

Query:   17 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLEL 289
            S+N+  G IP+S+S L NL  L L+ N+ +GSIP  +     L+ L+L++N L+G +P+S   L SL +L+L+ NKL G +P    NL EL
Sbjct:  612 SNNHLSGEIPASLSRLTNLTILDLSGNALTGSIPKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKEL 702

HSP 3 Score: 67.3958 bits (163), Expect = 9.247e-12
Identity = 38/86 (44.19%), Postives = 48/86 (55.81%), Query Frame = -2

Query:   32 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPS 289
            SDN   G IP  I  L +L  L L +N F G IP  +    SL TLDL  N L G++P  + +L  L+ L LSYN L+G +P  PS
Sbjct:  480 SDNQLTGEIPREIGKLTSLSVLNLNANMFQGKIPVELGDCTSLTTLDLGSNNLQGQIPDKITALAQLQCLVLSYNNLSGSIPSKPS 565

HSP 4 Score: 60.4622 bits (145), Expect = 1.416e-9
Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKS-LNSLTSLKRLDLSYNKLTGFLP 289
            + N F G+IP  I +L++LQTL L+ NS +G +P  ++ L  L  LDLS N  SG LP S   SL +L  LD+S N L+G +P
Sbjct:   97 AGNQFSGKIPPEIWNLKHLQTLDLSGNSLTGLLPRLLSELPQLLYLDLSDNHFSGSLPPSFFISLPALSSLDVSNNSLSGEIP 179

HSP 5 Score: 59.3066 bits (142), Expect = 3.384e-9
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S N   G +P+ I +  +L+ L+L+ N  +G IP  +  L SL  L+L+ N   GK+P  L   TSL  LDL  N L G +P
Sbjct:  456 SYNRLEGYLPAEIGNAASLKRLVLSDNQLTGEIPREIGKLTSLSVLNLNANMFQGKIPVELGDCTSLTTLDLGSNNLQGQIP 537

HSP 6 Score: 58.9214 bits (141), Expect = 3.793e-9
Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = -2

Query:   47 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFL 289
            S N   G IP  + +   LQ L L +N  +G IP+S   L SL  L+L+ N L G +P SL +L  L  +DLS+N L+G L
Sbjct:  636 SGNALTGSIPKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKELTHMDLSFNNLSGEL 716

HSP 7 Score: 58.151 bits (139), Expect = 7.401e-9
Identity = 36/91 (39.56%), Postives = 49/91 (53.85%), Query Frame = -2

Query:   17 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLEL 289
            ++N   G IP S   L +L  L LT N   G +P S+  LK L  +DLS N LSG+L   L+++  L  L +  NK TG +P    NL +L
Sbjct:  660 ANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKELTHMDLSFNNLSGELSSELSTMEKLVGLYIEQNKFTGEIPSELGNLTQL 750

HSP 8 Score: 56.9954 bits (136), Expect = 1.738e-8
Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = -2

Query:    2 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK---LPSNLLELALKAN 289
            S N   G IP  +     L  + L++N  SG IP S++ L +L  LDLS NAL+G +PK + +   L+ L+L+ N+L G +P+   L  +L++L L  N
Sbjct:  588 SYNRLSGPIPEELGECLVLVEISLSNNHLSGEIPASLSRLTNLTILDLSGNALTGSIPKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLTKN 686

HSP 9 Score: 56.6102 bits (135), Expect = 2.264e-8
Identity = 30/80 (37.50%), Postives = 46/80 (57.50%), Query Frame = -2

Query:   44 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 283
            N   G + S +S++  L  L +  N F+G IP  +  L  LE LD+S N LSG++P  +  L +L+ L+L+ N L G +P
Sbjct:  710 NNLSGELSSELSTMEKLVGLYIEQNKFTGEIPSELGNLTQLEYLDVSENLLSGEIPTKICGLPNLEFLNLAKNNLRGEVP 789

HSP 10 Score: 56.6102 bits (135), Expect = 2.562e-8
Identity = 40/100 (40.00%), Postives = 55/100 (55.00%), Query Frame = -2

Query:    2 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP----KLPSNLLELALKAN 289
            ++N F G IP  I     L+ L L SN  SGSIP  +    SLE +DLS N LSG + +  +  +SL  L L+ N++ G +P    KLP  L+ L L +N
Sbjct:  337 ANNRFSGEIPHEIEDCPMLKHLSLASNLLSGSIPRELCGSGSLEAIDLSGNLLSGTIEEVFDGCSSLGELLLTNNQINGSIPEDLWKLP--LMALDLDSN 434

HSP 11 Score: 56.225 bits (134), Expect = 2.977e-8
Identity = 33/83 (39.76%), Postives = 43/83 (51.81%), Query Frame = -2

Query:   41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289
            S+N   G IP  I  L NL  L +  NSFSG IP  +  +  L+         +G LPK ++ L  L +LDLSYN L   +PK
Sbjct:  170 SNNSLSGEIPPEIGKLSNLSNLYMGLNSFSGQIPSEIGNISLLKNFAAPSCFFNGPLPKEISKLKHLAKLDLSYNPLKCSIPK 252

HSP 12 Score: 53.9138 bits (128), Expect = 1.467e-7
Identity = 44/125 (35.20%), Postives = 59/125 (47.20%), Query Frame = -2

Query:   17 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTA-LKSLETLDLS-----------------------------------HNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLEL 283
            N   G+IP  I++L  LQ L+L+ N+ SGSIP   +A    +E  DLS                                   +N LSG++P SL+ LT+L  LDLS N LTG +PK   N L+L
Sbjct:  530 NNLQGQIPDKITALAQLQCLVLSYNNLSGSIPSKPSAYFHQIEMPDLSFLQHHGIFDLSYNRLSGPIPEELGECLVLVEISLSNNHLSGEIPASLSRLTNLTILDLSGNALTGSIPKEMGNSLKL 654

HSP 13 Score: 53.9138 bits (128), Expect = 1.769e-7
Identity = 31/80 (38.75%), Postives = 45/80 (56.25%), Query Frame = -2

Query:   44 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 283
            N F G+IPS I ++  L+     S  F+G +P  ++ LK L  LDLS+N L   +PKS   L +L  L+L   +L G +P
Sbjct:  196 NSFSGQIPSEIGNISLLKNFAAPSCFFNGPLPKEISKLKHLAKLDLSYNPLKCSIPKSFGELHNLSILNLVSAELIGLIP 275

HSP 14 Score: 53.5286 bits (127), Expect = 2.232e-7
Identity = 34/83 (40.96%), Postives = 47/83 (56.63%), Query Frame = -2

Query:   41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289
            ++N   G IP  +  L  L  L L SN+F+G IP S+    +L     S+N L G LP  + +  SLKRL LS N+LTG +P+
Sbjct:  409 TNNQINGSIPEDLWKLP-LMALDLDSNNFTGEIPKSLWKSTNLMEFTASYNRLEGYLPAEIGNAASLKRLVLSDNQLTGEIPR 490

HSP 15 Score: 52.7582 bits (125), Expect = 3.523e-7
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = -2

Query:   17 GSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLEL 199
            G IP  +++LK+L  L L+ N  SGK+P  + +L  L+ LDLS N LTG LP+L S L +L
Sbjct:   79 GQIPKEISSLKNLRELCLAGNQFSGKIPPEIWNLKHLQTLDLSGNSLTGLLPRLLSELPQL 139

HSP 16 Score: 52.373 bits (124), Expect = 4.911e-7
Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = -2

Query:   38 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKL 283
            N   G +PS +   + L +L+L +N FSG IP  +     L+ L L+ N LSG +P+ L    SL+ +DLS N L+G + ++
Sbjct:  315 NQLSGSLPSWMGKWKVLDSLLLANNRFSGEIPHEIEDCPMLKHLSLASNLLSGSIPRELCGSGSLEAIDLSGNLLSGTIEEV 396

HSP 17 Score: 51.6026 bits (122), Expect = 8.212e-7
Identity = 33/79 (41.77%), Postives = 44/79 (55.70%), Query Frame = -2

Query:   44 YFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 280
            +F G +P  IS L++L  L L+ N    SIP S   L +L  L+L    L G +P  L +  SLK L LS+N L+G LP
Sbjct:  221 FFNGPLPKEISKLKHLAKLDLSYNPLKCSIPKSFGELHNLSILNLVSAELIGLIPPELGNCKSLKSLMLSFNSLSGPLP 299

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.721e-14
Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = -2

Query:   44 FFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 277
              G IP S+S L +L  L LT N  +GSIP  +T LK++E ++L +N+ SG+LP+S+ ++T+LKR D S NKLTG +P
Sbjct:  224 LVGPIPPSLSRLTSLVNLDLTFNQLTGSIPSWITQLKTVEQIELFNNSFSGELPESMGNMTTLKRFDASMNKLTGKIP 301

HSP 2 Score: 71.2478 bits (173), Expect = 4.079e-13
Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = -2

Query:   41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289
            SDN F G IP +I   +NL  L ++ N FSGSIP+ + +L  +  +  + N  SG++P+SL  L  L RLDLS N+L+G +P+
Sbjct:  435 SDNSFTGSIPKTIIGAKNLSNLRISKNRFSGSIPNEIGSLNGIIEISGAENDFSGEIPESLVKLKQLSRLDLSKNQLSGEIPR 517

HSP 3 Score: 62.003 bits (149), Expect = 4.192e-10
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = -2

Query:   41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289
            S N F G IP+++     L+ LIL  NSFSG I +++   KSL  + LS+N LSG++P     L  L  L+LS N  TG +PK
Sbjct:  363 SYNRFSGEIPANVCGEGKLEYLILIDNSFSGEISNNLGKCKSLTRVRLSNNKLSGQIPHGFWGLPRLSLLELSDNSFTGSIPK 445

HSP 4 Score: 59.6918 bits (143), Expect = 2.305e-9
Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = -2

Query:   11 SDNYFFGRIPSSIS-SLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLT-GFLPKLPSNLLELAL 289
            S+N   G IP S+  +L NL+ L ++ N+ S +IP S    + LE+L+L+ N LSG +P SL ++T+LK L L+YN  +   +P    NL EL +
Sbjct:  122 SENLLVGSIPKSLPFNLPNLKFLEISGNNLSDTIPSSFGEFRKLESLNLAGNFLSGTIPASLGNVTTLKELKLAYNLFSPSQIPSQLGNLTELQV 216

HSP 5 Score: 57.7658 bits (138), Expect = 9.706e-9
Identity = 37/83 (44.58%), Postives = 50/83 (60.24%), Query Frame = -2

Query:   41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289
            S N F G IP+ I SL  +  +    N FSG IP+S+  LK L  LDLS N LSG++P+ L    +L  L+L+ N L+G +PK
Sbjct:  459 SKNRFSGSIPNEIGSLNGIIEISGAENDFSGEIPESLVKLKQLSRLDLSKNQLSGEIPRELRGWKNLNELNLANNHLSGEIPK 541

HSP 6 Score: 55.4546 bits (132), Expect = 5.698e-8
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGS-IPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            + N+  G IP+S+ ++  L+ L L  N FS S IP  +  L  L+ L L+   L G +P SL+ LTSL  LDL++N+LTG +P
Sbjct:  171 AGNFLSGTIPASLGNVTTLKELKLAYNLFSPSQIPSQLGNLTELQVLWLAGCNLVGPIPPSLSRLTSLVNLDLTFNQLTGSIP 253

HSP 7 Score: 53.1434 bits (126), Expect = 2.597e-7
Identity = 32/81 (39.51%), Postives = 46/81 (56.79%), Query Frame = -2

Query:   44 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 286
            +N   G +PS + +   LQ + L+ N FSG IP +V     LE L L  N+ SG++  +L    SL R+ LS NKL+G +P
Sbjct:  340 NNRLTGVLPSQLGANSPLQYVDLSYNRFSGEIPANVCGEGKLEYLILIDNSFSGEISNNLGKCKSLTRVRLSNNKLSGQIP 420

HSP 8 Score: 52.7582 bits (125), Expect = 4.296e-7
Identity = 34/103 (33.01%), Postives = 51/103 (49.51%), Query Frame = -2

Query:   44 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGK-----------------------LPKSLNSLTSLKRLDLSYNKLTGFLP 283
            N   G IPS I+ L+ ++ + L +NSFSG +P+S+  + +L+  D S N L+GK                       LP+S+    +L  L L  N+LTG LP
Sbjct:  246 NQLTGSIPSWITQLKTVEQIELFNNSFSGELPESMGNMTTLKRFDASMNKLTGKIPDNLNLLNLESLNLFENMLEGPLPESITRSKTLSELKLFNNRLTGVLP 348

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: DR100_ARATH (DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 4.217e-14
Identity = 56/136 (41.18%), Postives = 78/136 (57.35%), Query Frame = -2

Query:   44 GVSCSPDATRITQITL-----DPI-------GY-SGXXXXXXXXXXXXXXXXLSD-NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 409
            G+SC PD+ R+T I+L     D I       GY SG + P +  LT LT+L L+D     G IP  I+SL +L+ L L  N  +G IP  +  L  L  L+L+ N +SG++P SL SL  LK L+L+ N +TG +P
Sbjct:   65 GISCDPDSGRVTDISLRGESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCITSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTENGITGVIP 200

HSP 2 Score: 64.3142 bits (155), Expect = 3.791e-11
Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = -2

Query:   11 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 289
            ++N   G IP+S++SL  L+ L LT N  +G IP    +LK L  + L  N L+G +P+S++ +  L  LDLS N + G +P+   N+  L+L
Sbjct:  167 AENQMSGEIPASLTSLIELKHLELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSL 259

HSP 3 Score: 63.1586 bits (152), Expect = 9.388e-11
Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = -2

Query:   44 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 283
            N   G IP S+ S   L    L+ N+  G+IPD   +   L +LDLSHN+LSG++P SL+S   +  LD+S+NKL G +P
Sbjct:  265 NSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIP 344

HSP 4 Score: 61.6178 bits (148), Expect = 3.424e-10
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            ++N   G IP+   SL+ L  ++L  N  +GSIP+S++ ++ L  LDLS N + G +P+ + ++  L  L+L  N LTG +P
Sbjct:  191 TENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIP 272

HSP 5 Score: 57.7658 bits (138), Expect = 5.824e-9
Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S N+  G IP  + +++ L  L L  NS +G IP S+ +   L+  +LS NAL G +P    S T L  LDLS+N L+G +P
Sbjct:  239 SKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHNSLSGRIP 320

HSP 6 Score: 53.9138 bits (128), Expect = 1.008e-7
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = -2

Query:   38 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKL 283
            N   G IP SIS +  L  L L+ N   G IP+ +  +K L  L+L  N+L+G +P SL S + L   +LS N L G +P +
Sbjct:  217 NELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDV 298

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
D7L3K9_ARALL	7.895e-60	69.10	Leucine-rich repeat family protein OS=Arabidopsis ...	[more]
R0I3Z7_9BRAS	1.001e-58	69.10	Uncharacterized protein OS=Capsella rubella GN=CAR...	[more]
V4UAC0_9ROSI	1.480e-58	74.16	Uncharacterized protein (Fragment) OS=Citrus cleme...	[more]
A0A067F128_CITSI	1.706e-58	74.16	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A0A067LRA0_JATCU	3.517e-56	75.71	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
F6I5Y7_VITVI	1.331e-55	65.54	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A0A0B2PGK8_GLYSO	3.314e-55	72.32	DNA-damage-repair/toleration protein DRT100 OS=Gly...	[more]
A0A087HD06_ARAAL	8.467e-55	71.91	Uncharacterized protein OS=Arabis alpina GN=AALP_A...	[more]
I1LEK4_SOYBN	1.542e-54	72.88	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
C0L2V1_ARAHY	7.252e-54	72.73	Putative disease resistance protein OS=Arachis hyp...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
Y4052_ARATH	9.161e-17	40.00	Probable LRR receptor-like serine/threonine-protei...	[more]
Y2239_ARATH	1.241e-16	40.65	Probable LRR receptor-like serine/threonine-protei...	[more]
Y1668_ARATH	1.956e-15	40.65	Probable inactive leucine-rich repeat receptor-lik...	[more]
SRF5_ARATH	5.740e-15	49.37	Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi...	[more]
PGIP1_ORYSJ	7.890e-15	47.37	Polygalacturonase inhibitor 1 OS=Oryza sativa subs...	[more]
PII2_ARATH	1.181e-14	48.78	Piriformospora indica-insensitive protein 2 OS=Ara...	[more]
PSKR2_ARATH	1.818e-14	46.34	Phytosulfokine receptor 2 OS=Arabidopsis thaliana ...	[more]
EMS1_ARATH	3.481e-14	53.95	Leucine-rich repeat receptor protein kinase EMS1 O...	[more]
RLK5_ARATH	3.721e-14	48.72	Receptor-like protein kinase 5 OS=Arabidopsis thal...	[more]
DR100_ARATH	4.217e-14	41.18	DNA-damage-repair/toleration protein DRT100 OS=Ara...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00019	LEURICHRPT	coord: 43..56 score: 56.59 coord: 22..35 score: 54.32
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 1..75
None	No IPR available	PANTHER	PTHR27000:SF170	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 1..75
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 43..66 e-value: 1.1 score: 18.2 coord: 19..42 e-value: 19.0 score: 11.0
IPR032675	Leucine-rich repeat domain, L domain-like	GENE3D	3.80.10.10		coord: 3..69 e-value: 3.0E-19 score: 68.3
IPR032675	Leucine-rich repeat domain, L domain-like	SUPERFAMILY	52058	L domain-like	coord: 3..70
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 2..56 e-value: 4.6E-11 score: 42.2
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 45..67 score: 6.88
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 21..44 score: 7.227

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0005130 ID=g.arboreum_cottongen_reftransV1_0005130; Name=g.arboreum_cottongen_reftransV1_0005130; organism=Gossypium arboreum; type=contig; length=533bp
AATTTGCTTTTAAAGCAAGTTCCAATAAATTAGACGGCAGTTTCGGTAGA
AATCCAGTGAGTTTGTTGTAACTCAGGTCGAGCCTCTTTAAACTCGTAAG
TGAGTTAAGTGATTTCGGTAATTTCCCGGAAAGAGCATTATGAGAAAGGT
CTAATGTTTCAAGCGATTTGAGAGCCGTGACTGAGTCAGGAATCGAGCCG
GAAAACGAGTTGGATGTTAGAATCAGAGTCTGGAGATTACGTAGAGAAGA
AATGGAAGAAGGTATACGACCGAAGAAATAGTTATCAGAGAGATCGAGTG
TGGTGAGTTGGGTGAGTTGTGAAATGAGTGGGGTGAGTTGACCCGAGTAA
CCAATAGGATCAAGCGTGATTTGGGTGATACGAGTGGCGTCCGGCGAGCA
AGAAACGCCACAAATAAAGCGAGTACGGTGGGGGACGGCGCAAGGGTCGT
CGGAAAAGTCCCATGAAGCTAGGCAAGACCATGATGGGATTGAGCTTTGT
TTGATCGAGGATTTAAAGGCTTTTAAAGCTGAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

g.arboreum_cottongen_reftransV1_0005130, g.arboreum_cottongen_reftransV1_0005130 (contig) Gossypium arboreum

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