g.arboreum_cottongen_reftransV1_0005130, g.arboreum_cottongen_reftransV1_0005130 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0005130
Unique Name	g.arboreum_cottongen_reftransV1_0005130
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	533

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr7	chromosome	g.arboreum_cottongen_reftransV1_0005130:1..533 . Chr7:38755950..38756482 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: A0A0D2QYH5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G009100 PE=4 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 4.956e-88
Identity = 174/177 (98.31%), Postives = 174/177 (98.31%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFKSSIKQSSIPSWSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGQLTPLISQLTQLTTLDLSDNYFFGRIPSSI SLRNLQTL LTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLP NLLELALKAN
Sbjct:   28 SALKAFKSSIKQSSIPSWSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGQLTPLISQLTQLTTLDLSDNYFFGRIPSSIYSLRNLQTLTLTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPFNLLELALKAN 204

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: A0A061E129_THECC (Leucine-rich repeat (LRR) family protein OS=Theobroma cacao GN=TCM_007126 PE=4 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 2.269e-69
Identity = 141/177 (79.66%), Postives = 159/177 (89.83%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFK+SIK SSIPSWSCLASWDF+ DPCA+P RT FICG++CSPD+ R+TQITLDP GYSGQL PL+SQLTQLTTLDLSDN FFG IPSSI+SLR+LQ+L L SNSFSGSIPDSV  +KSLE LDLSHN+LSG LPK+LNSL+SL+R+DLSYNK TGFLPKLP NLLELAL+ N
Sbjct:   28 SALKAFKASIKPSSIPSWSCLASWDFTTDPCAIPRRTHFICGLTCSPDSARVTQITLDPAGYSGQLNPLVSQLTQLTTLDLSDNNFFGPIPSSITSLRSLQSLTLRSNSFSGSIPDSVATIKSLEYLDLSHNSLSGPLPKTLNSLSSLRRVDLSYNKFTGFLPKLPYNLLELALRGN 204

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: B9HS48_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s10000g PE=4 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 4.610e-69
Identity = 137/177 (77.40%), Postives = 155/177 (87.57%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFK+S+K SSI  WSCLASWDF  DPCAVP RTRF CG++CSPD+TR+TQ+TLD  GYSG+LTPL SQLT L  LDL+DN FFG IPSSISSL NLQTL L SNSFSGS+PDS+T LKSLE+LDLSHN+LSG LPK++NS++SL+RLDLSYNKLTG LPKLP NLLELALKAN
Sbjct:   30 SALKAFKASVKPSSIQPWSCLASWDFIADPCAVPRRTRFTCGITCSPDSTRVTQLTLDSAGYSGRLTPLTSQLTSLIILDLADNNFFGPIPSSISSLINLQTLTLRSNSFSGSVPDSITNLKSLESLDLSHNSLSGYLPKTMNSMSSLRRLDLSYNKLTGSLPKLPYNLLELALKAN 206

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: B9GHD2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s30880g PE=4 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.939e-67
Identity = 135/177 (76.27%), Postives = 155/177 (87.57%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFK+S+K SSI  WSCLASWDF+ DPCA P RT FICG++CSPD+TR+TQ+TLDP GYSGQLTPLIS LT LT LDL DN F+G IPSSISSL NLQTL L+SNSFSG++P+S+T LKSLE+LD SHN LSG LPK++NS++SL+RLDLSYNKLTG LPKLP NLLELALKAN
Sbjct:   33 SALKAFKASVKPSSIQPWSCLASWDFTTDPCAFPRRTHFICGITCSPDSTRVTQLTLDPAGYSGQLTPLISLLTSLTILDLVDNNFYGPIPSSISSLINLQTLTLSSNSFSGAVPNSITNLKSLESLDFSHNYLSGYLPKTMNSMSSLRRLDLSYNKLTGPLPKLPYNLLELALKAN 209

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: A0A0D2VAM6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G046700 PE=4 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.350e-67
Identity = 143/178 (80.34%), Postives = 159/178 (89.33%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFSD-DPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFK+SIK +SIPSWSCLASWDF+  DPCA+P RT F CG+ CS D+TR+TQITLDP GYSGQLTPL+SQLTQLT LDLSDN FFG IPSSISSLR+LQTLIL SNSFSGSIPDSVT LKSLE+LD+SHN+LSG LPK+LN L+ L+RLDLSYN+LTGFLPKLP NLLELALK N
Sbjct:   45 SALKAFKASIKPTSIPSWSCLASWDFAAADPCALPRRTHFTCGIICSIDSTRVTQITLDPAGYSGQLTPLLSQLTQLTILDLSDNSFFGSIPSSISSLRSLQTLILKSNSFSGSIPDSVTTLKSLESLDISHNSLSGPLPKTLNLLSGLRRLDLSYNQLTGFLPKLPYNLLELALKGN 222

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: C6ZS02_SOYBN (Leucine-rich repeat disease resistance protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.996e-63
Identity = 133/177 (75.14%), Postives = 155/177 (87.57%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            +ALKAFK+SIK SSI  WSCLASW+F+ DPC++P RT FICG++C+ D+TRI QITLDP GYSG LTPLISQLTQLTTLDL+DN FFG IPSSIS L NLQTL L SNSFSG+IP S+T LKSL +LDL+HN+LSG LP S+NSLT+L+RLDLS+NKLTG +PKLPSNLLELA+KAN
Sbjct:   34 AALKAFKASIKPSSITPWSCLASWNFTTDPCSLPRRTSFICGLTCTQDSTRINQITLDPAGYSGTLTPLISQLTQLTTLDLADNNFFGPIPSSISLLSNLQTLTLRSNSFSGTIPPSITTLKSLLSLDLAHNSLSGYLPNSMNSLTTLRRLDLSFNKLTGSIPKLPSNLLELAIKAN 210

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: B9RYA6_RICCO (Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0811600 PE=4 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.383e-61
Identity = 138/178 (77.53%), Postives = 154/178 (86.52%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFKSSIK SSIPSWSCLASWDF+  DPC +P R+ F CGV+CS DATR+TQ+TLDP+GYSGQLTPLISQLT LT LDLSDN FFG +PSSISSL NLQTL L  NSFSGS+P S+T LKSL +LDLSHN+L G LPKS+NS++SL+RLDLSYNKLTG LPKLP NLLELALK N
Sbjct:   29 SALKAFKSSIKPSSIPSWSCLASWDFTLADPCLLPRRSHFTCGVTCSSDATRVTQLTLDPVGYSGQLTPLISQLTNLTILDLSDNNFFGSVPSSISSLINLQTLTLRFNSFSGSLPISITNLKSLRSLDLSHNSLFGYLPKSMNSMSSLRRLDLSYNKLTGSLPKLPYNLLELALKNN 206

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: Q9SHU4_ARATH (Leucine-rich repeat-containing protein OS=Arabidopsis thaliana GN=At2g15320 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 1.275e-60
Identity = 124/178 (69.66%), Postives = 157/178 (88.20%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFK+++K +SIP WSCLASWDF+  DPCA P RT F CG++CS D+TR+TQ+TLDP GY+G+LTPLIS LT+L TLDL++N F+G IPSSISSL +L+TLIL SNSFSGS+PDSVT L SLE++D+SHN+L+G LPK++NSL++L++LDLSYNKLTG +PKLP NL++LALKAN
Sbjct:   26 SALKAFKATVKPNSIPPWSCLASWDFTVSDPCASPRRTHFTCGITCSSDSTRVTQLTLDPAGYTGRLTPLISGLTELLTLDLAENNFYGLIPSSISSLTSLKTLILRSNSFSGSLPDSVTRLNSLESIDISHNSLTGPLPKTMNSLSNLRQLDLSYNKLTGAIPKLPKNLIDLALKAN 203

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: Q8LDD9_ARATH (Putative leucine-rich repeat disease resistance protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 1.623e-60
Identity = 124/178 (69.66%), Postives = 157/178 (88.20%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFS-DDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            SALKAFK+++K +SIP WSCLASWDF+  DPCA P RT F CG++CS D+TR+TQ+TLDP GY+G+LTPLIS LT+L TLDL++N F+G IPSSISSL +L+TLIL SNSFSGS+PDSVT L SLE++D+SHN+L+G LPK++NSL++L++LDLSYNKLTG +PKLP NL++LALKAN
Sbjct:   28 SALKAFKATVKPNSIPPWSCLASWDFTVSDPCASPRRTHFTCGITCSSDSTRVTQLTLDPAGYTGRLTPLISGLTELLTLDLAENNFYGLIPSSISSLTSLKTLILRSNSFSGSLPDSVTRLNSLESIDISHNSLTGPLPKTMNSLSNLRQLDLSYNKLTGAIPKLPKNLIDLALKAN 205

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Match: V7BEZ1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G038700g PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 5.534e-60
Identity = 129/177 (72.88%), Postives = 149/177 (84.18%), Query Frame = -2

Query:    2 SALKAFXXXXXXXXXXXXSCLASWDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELALKAN 532
            +ALKAFK SIK SSI S SCLASW+F+ DPC++P RT FICG +C+ D+ RI+QITLDP GYSG LTPLIS+L+QLTTLDLSDN FFG IPSSISSL NLQTL L SN FSG IP S+T LKSL++LDLSHN+L G L  S+NSLT L+RLDLS+NKLTG +PKLP NLLELA+KAN
Sbjct:   35 AALKAFKDSIKPSSIASSSCLASWNFTTDPCSLPRRTSFICGFTCTADSRRISQITLDPAGYSGTLTPLISRLSQLTTLDLSDNSFFGSIPSSISSLYNLQTLTLRSNFFSGPIPPSITTLKSLQSLDLSHNSLYGYLLNSMNSLTKLRRLDLSFNKLTGSIPKLPPNLLELAIKAN 211

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: NIK1_ARATH (Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.572e-14
Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = -2

Query:   32 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPS 289
             +N   G+IP+ I  L  L+TL L+ N F G IP SV  L+SL+ L L++N+LSG  P SL+++T L  LDLSYN L+G +P+  +
Sbjct:  113 QNNNIKGKIPAEIGRLTRLETLDLSDNFFHGEIPFSVGYLQSLQYLRLNNNSLSGVFPLSLSNMTQLAFLDLSYNNLSGPVPRFAA 198

HSP 2 Score: 64.3142 bits (155), Expect = 7.025e-11
Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = -2

Query:   11 GRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 271
            G +  SI++L NL+ ++L +N+  G IP  +  L  LETLDLS N   G++P S+  L SL+ L L+ N L+G  P   SN+ +LA 
Sbjct:   95 GTLSPSITNLTNLRIVLLQNNNIKGKIPAEIGRLTRLETLDLSDNFFHGEIPFSVGYLQSLQYLRLNNNSLSGVFPLSLSNMTQLAF 181

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.263e-14
Identity = 58/148 (39.19%), Postives = 78/148 (52.70%), Query Frame = -2

Query:   32 LASWDF-SDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPS 472
            L+ WD  S DPC           V CS +   +  + +   G SG L+  I +LT L TL L +N   G IPS +  L  L+TL L+ N FSG IP S+  L  L  L LS N LSG++P  +  L+ L  LDLS+N L+G  P + +
Sbjct:   57 LSGWDINSVDPCTWNM-------VGCSSEGF-VVSLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPHLVAGLSGLSFLDLSFNNLSGPTPNISA 196

HSP 2 Score: 57.3806 bits (137), Expect = 1.095e-8
Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = -2

Query:   11 GRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 271
            G + +SI  L +L TL+L +N  +G IP  +  L  LETLDLS N  SG++P SL  LT L  L LS N L+G +P L + L  L+ 
Sbjct:   93 GILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPHLVAGLSGLSF 179

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: CLV2_ARATH (Leucine-rich repeat receptor-like protein CLAVATA2 OS=Arabidopsis thaliana GN=CLV2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.876e-14
Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRN---LQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S N F GR+PS IS       L  L L+ NSFSG IP  +T LKSL+ L LSHN L+G +P  + +LT L+ +DLS+N LTG +P
Sbjct:  296 SHNGFSGRLPSRISETTEKLGLVLLDLSHNSFSGDIPLRITELKSLQALRLSHNLLTGDIPARIGNLTYLQVIDLSHNALTGSIP 380

HSP 2 Score: 60.4622 bits (145), Expect = 1.194e-9
Identity = 49/125 (39.20%), Postives = 73/125 (58.40%), Query Frame = -2

Query:   41 GVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNA-LSGKLPKSLNSLT-SLKRLDLSYNKLTGFLPK 409
            G++C     ++  +TL  +  S Q+ P + +L+ L +LDLS N F G IPS   SLRNL+TL L+ N F GSIP +  +LK L  + LS N  L G +P    + + +L+R+D S+    G LP+
Sbjct:   65 GLACQNPTGKVLSLTLSGLNLSSQIHPSLCKLSSLQSLDLSHNNFSGNIPSCFGSLRNLRTLNLSRNRFVGSIPATFVSLKELREVVLSENRDLGGVVPHWFGNFSMNLERVDFSFCSFVGELPE 189

HSP 3 Score: 59.6918 bits (143), Expect = 2.148e-9
Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S+N   G I   + +L +L+ L +++N  SG IP ++  LKSLE +D+S N LSG L +++   ++LK L L+ NK +G LP
Sbjct:  395 SNNNLSGEIQPELDALDSLKILDISNNHISGEIPLTLAGLKSLEIVDISSNNLSGNLNEAITKWSNLKYLSLARNKFSGTLP 476

HSP 4 Score: 57.7658 bits (138), Expect = 8.377e-9
Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S N   G IP+ I +L  LQ + L+ N+ +GSIP ++     L  L +S+N LSG++   L++L SLK LD+S N ++G +P
Sbjct:  347 SHNLLTGDIPARIGNLTYLQVIDLSHNALTGSIPLNIVGCFQLLALMISNNNLSGEIQPELDALDSLKILDISNNHISGEIP 428

HSP 5 Score: 56.225 bits (134), Expect = 2.484e-8
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = -2

Query:    2 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLP---SNLLELALKAN 289
            S N   G IP +I     L  L++++N+ SG I   + AL SL+ LD+S+N +SG++P +L  L SL+ +D+S N L+G L +     SNL  L+L  N
Sbjct:  371 SHNALTGSIPLNIVGCFQLLALMISNNNLSGEIQPELDALDSLKILDISNNHISGEIPLTLAGLKSLEIVDISSNNLSGNLNEAITKWSNLKYLSLARN 469

HSP 6 Score: 51.6026 bits (122), Expect = 7.889e-7
Identity = 32/85 (37.65%), Postives = 47/85 (55.29%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTS---LKRLDLSYNKLTGFLP 289
            ++N   G +PS + SL+ L  L L+ N F+  I   +   + L  LDLSHN  SG+LP  ++  T    L  LDLS+N  +G +P
Sbjct:  248 AENSLVGGLPSCLGSLKELSHLNLSFNGFNYEISPRLMFSEKLVMLDLSHNGFSGRLPSRISETTEKLGLVLLDLSHNSFSGDIP 332

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: Y1421_ARATH (Putative inactive receptor-like protein kinase At1g64210 OS=Arabidopsis thaliana GN=At1g64210 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.254e-13
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = -2

Query:   38 WDFSDDPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXX-XXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKL 463
            W+ S D C          GV+C+ +  RI  + L  +G++G +    IS+L+ L  L L  N+F G  PS  ++L++L  L L  N  SG +    + LK+L+ LDLS+N  +G +P SL+ LTSL+ L+L+ N  +G +P L
Sbjct:   43 WNQSSDVC------HSWTGVTCNENGDRIVSVRLPAVGFNGLIPPFTISRLSSLKFLSLRKNHFTGDFPSDFTNLKSLTHLYLQHNHLSGPLLAIFSELKNLKVLDLSNNGFNGSIPTSLSGLTSLQVLNLANNSFSGEIPNL 179

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: PLRX2_ARATH (Pollen-specific leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana GN=PEX2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.277e-13
Identity = 33/81 (40.74%), Postives = 53/81 (65.43%), Query Frame = -2

Query:   47 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFL 289
            ++N F G IP SI +++NL  ++ T N+ +G  P+ +  L ++   D S N   G LP +L+ L S+++LDLS+NKLTGF+
Sbjct:  233 ANNKFSGCIPKSIGNMKNLNEIVFTGNNLTGCFPNEIGLLNNVTVFDASKNGFVGSLPSTLSGLASVEQLDLSHNKLTGFV 313

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: NIK2_ARATH (Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana GN=NIK2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.291e-13
Identity = 36/83 (43.37%), Postives = 58/83 (69.88%), Query Frame = -2

Query:   41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289
             +NY  G IP  I  L  L+TL L++N+F+G IP +++  K+L+ L +++N+L+G +P SL ++T L  LDLSYN L+G +P+
Sbjct:  113 QNNYITGNIPHEIGKLMKLKTLDLSTNNFTGQIPFTLSYSKNLQYLRVNNNSLTGTIPSSLANMTQLTFLDLSYNNLSGPVPR 195

HSP 2 Score: 63.5438 bits (153), Expect = 1.234e-10
Identity = 34/87 (39.08%), Postives = 56/87 (64.37%), Query Frame = -2

Query:   11 GRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 271
            G + SSI +L NLQT++L +N  +G+IP  +  L  L+TLDLS N  +G++P +L+   +L+ L ++ N LTG +P   +N+ +L  
Sbjct:   95 GTLSSSIGNLTNLQTVLLQNNYITGNIPHEIGKLMKLKTLDLSTNNFTGQIPFTLSYSKNLQYLRVNNNSLTGTIPSSLANMTQLTF 181

HSP 3 Score: 55.0694 bits (131), Expect = 6.047e-8
Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = -2

Query:  107 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSL 289
            S N F G+IP ++S  +NLQ L + +NS +G+IP S+  +  L  LDLS+N LSG +P+SL
Sbjct:  137 STNNFTGQIPFTLSYSKNLQYLRVNNNSLTGTIPSSLANMTQLTFLDLSYNNLSGPVPRSL 197

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: BAME3_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana GN=BAM3 PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-13
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S+N   G IP SI +LR+LQ L+L +N  SG IP  + +LKSL  +D+S N  SGK P       SL  LDLS+N+++G +P
Sbjct:  474 SNNRLSGPIPGSIRNLRSLQILLLGANRLSGQIPGEIGSLKSLLKIDMSRNNFSGKFPPEFGDCMSLTYLDLSHNQISGQIP 555

HSP 2 Score: 70.0922 bits (170), Expect = 9.697e-13
Identity = 34/87 (39.08%), Postives = 57/87 (65.52%), Query Frame = -2

Query:   11 GRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 271
            G IP+ + +L+NL+ L L +N  +GS+P  +  + SL+TLDLS+N L G++P  L+ L  L+  +L +N+L G +P+  S L +L +
Sbjct:  261 GSIPAELGNLKNLEVLFLQTNELTGSVPRELGNMTSLKTLDLSNNFLEGEIPLELSGLQKLQLFNLFFNRLHGEIPEFVSELPDLQI 347

HSP 3 Score: 68.1662 bits (165), Expect = 4.997e-12
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = -2

Query:   41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289
            S+N+  G IP  +S L+ LQ   L  N   G IP+ V+ L  L+ L L HN  +GK+P  L S  +L  +DLS NKLTG +P+
Sbjct:  303 SNNFLEGEIPLELSGLQKLQLFNLFFNRLHGEIPEFVSELPDLQILKLWHNNFTGKIPSKLGSNGNLIEIDLSTNKLTGLIPE 385

HSP 4 Score: 62.7734 bits (151), Expect = 2.292e-10
Identity = 41/91 (45.05%), Postives = 53/91 (58.24%), Query Frame = -2

Query:   11 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 283
            N + G IP+    L NL  L L + S  GSIP  +  LK+LE L L  N L+G +P+ L ++TSLK LDLS N L G +P   S L +L L
Sbjct:  233 NDYRGGIPADFGRLINLVHLDLANCSLKGSIPAELGNLKNLEVLFLQTNELTGSVPRELGNMTSLKTLDLSNNFLEGEIPLELSGLQKLQL 323

HSP 5 Score: 58.9214 bits (141), Expect = 4.380e-9
Identity = 39/93 (41.94%), Postives = 51/93 (54.84%), Query Frame = -2

Query:   14 SDNYFFGRIPS-SISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELA 289
            S N F G + +   S +  L TL    NSF+GS+P S+T L  LE LDL  N   G++P+S  S  SLK L LS N L G +P   +N+  L 
Sbjct:  133 SSNVFEGELETRGFSQMTQLVTLDAYDNSFNGSLPLSLTTLTRLEHLDLGGNYFDGEIPRSYGSFLSLKFLSLSGNDLRGRIPNELANITTLV 225

HSP 6 Score: 54.6842 bits (130), Expect = 7.976e-8
Identity = 31/85 (36.47%), Postives = 48/85 (56.47%), Query Frame = -2

Query:   44 SDNYFFGRIPSSIS---SLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
             +N+  G IP   +      +L  + L++N  SG IP S+  L+SL+ L L  N LSG++P  + SL SL ++D+S N  +G  P
Sbjct:  447 QNNFLTGEIPEEEAGNAQFSSLTQINLSNNRLSGPIPGSIRNLRSLQILLLGANRLSGQIPGEIGSLKSLLKIDMSRNNFSGKFP 531

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: PXL1_ARATH (Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana GN=PXL1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.548e-13
Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = -2

Query:   44 YFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 280
            YF G +PSS  +L+NL+ L L+ N+F G +P  +  L SLET+ L +N   G++P+    LT L+ LDL+   LTG +P
Sbjct:  184 YFEGSVPSSFKNLKNLKFLGLSGNNFGGKVPKVIGELSSLETIILGYNGFMGEIPEEFGKLTRLQYLDLAVGNLTGQIP 262

HSP 2 Score: 69.3218 bits (168), Expect = 1.706e-12
Identity = 40/91 (43.96%), Postives = 50/91 (54.95%), Query Frame = -2

Query:   11 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 283
            N F G IP     L  LQ L L   + +G IP S+  LK L T+ L  N L+GKLP+ L  +TSL  LDLS N++TG +P     L  L L
Sbjct:  231 NGFMGEIPEEFGKLTRLQYLDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLSDNQITGEIPMEVGELKNLQL 321

HSP 3 Score: 68.9366 bits (167), Expect = 2.156e-12
Identity = 37/82 (45.12%), Postives = 48/82 (58.54%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            SDN   G IP  +  L+NLQ L L  N  +G IP  +  L +LE L+L  N+L G LP  L   + LK LD+S NKL+G +P
Sbjct:  301 SDNQITGEIPMEVGELKNLQLLNLMRNQLTGIIPSKIAELPNLEVLELWQNSLMGSLPVHLGKNSPLKWLDVSSNKLSGDIP 382

HSP 4 Score: 67.3958 bits (163), Expect = 6.870e-12
Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = -2

Query:   41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289
            S N F G++P  I  L +L+T+IL  N F G IP+    L  L+ LDL+   L+G++P SL  L  L  + L  N+LTG LP+
Sbjct:  205 SGNNFGGKVPKVIGELSSLETIILGYNGFMGEIPEEFGKLTRLQYLDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPR 287

HSP 5 Score: 67.0106 bits (162), Expect = 9.317e-12
Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = -2

Query:   11 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 283
            N+F G IP  I+S   L +L L SN   G IP ++  +  L  LDLS+N+L+G +P  L +  +L+ L++S+NKL G    +PSN+L  A+
Sbjct:  518 NHFSGGIPERIASFEKLVSLNLKSNQLVGEIPKALAGMHMLAVLDLSNNSLTGNIPADLGASPTLEMLNVSFNKLDG---PIPSNMLFAAI 605

HSP 6 Score: 65.0846 bits (157), Expect = 4.139e-11
Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S N F G+IP+ I    +L  L L+ N FSG IP+ + + + L +L+L  N L G++PK+L  +  L  LDLS N LTG +P
Sbjct:  492 SHNNFAGKIPNQIQDRPSLSVLDLSFNHFSGGIPERIASFEKLVSLNLKSNQLVGEIPKALAGMHMLAVLDLSNNSLTGNIP 573

HSP 7 Score: 63.5438 bits (153), Expect = 1.302e-10
Identity = 30/76 (39.47%), Postives = 48/76 (63.16%), Query Frame = -2

Query:   44 GRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 271
            G+IPSS+  L+ L T+ L  N  +G +P  +  + SL  LDLS N ++G++P  +  L +L+ L+L  N+LTG +P
Sbjct:  259 GQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLSDNQITGEIPMEVGELKNLQLLNLMRNQLTGIIP 334

HSP 8 Score: 59.3066 bits (142), Expect = 3.106e-9
Identity = 33/82 (40.24%), Postives = 47/82 (57.32%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S N   G IPS +   RNL  LIL +NSFSG IP+ + +  +L  + +  N +SG +P     L  L+ L+L+ N LTG +P
Sbjct:  373 SSNKLSGDIPSGLCYSRNLTKLILFNNSFSGQIPEEIFSCPTLVRVRIQKNHISGSIPAGSGDLPMLQHLELAKNNLTGKIP 454

HSP 9 Score: 58.5362 bits (140), Expect = 6.016e-9
Identity = 31/76 (40.79%), Postives = 45/76 (59.21%), Query Frame = -2

Query:   11 NLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 238
            NLQT I + N+F+G IP+ +    SL  LDLS N  SG +P+ + S   L  L+L  N+L G +PK  + +  LA+
Sbjct:  485 NLQTFIASHNNFAGKIPNQIQDRPSLSVLDLSFNHFSGGIPERIASFEKLVSLNLKSNQLVGEIPKALAGMHMLAV 560

HSP 10 Score: 55.0694 bits (131), Expect = 6.783e-8
Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = -2

Query:   41 GRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 271
            G +   I S  +LQ L L++N+F  S+P S++ L SL+ +D+S N+  G  P  L   T L  ++ S N  +GFLP+
Sbjct:   91 GNVSDQIQSFPSLQALDLSNNAFESSLPKSLSNLTSLKVIDVSVNSFFGTFPYGLGMATGLTHVNASSNNFSGFLPE 167

HSP 11 Score: 55.0694 bits (131), Expect = 7.614e-8
Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = -2

Query:   44 LILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 226
            L+L++ + SG++ D + +  SL+ LDLS+NA    LPKSL++LTSLK +D+S N   G  P
Sbjct:   82 LLLSNMNLSGNVSDQIQSFPSLQALDLSNNAFESSLPKSLSNLTSLKVIDVSVNSFFGTFP 142

HSP 12 Score: 52.373 bits (124), Expect = 5.076e-7
Identity = 31/88 (35.23%), Postives = 44/88 (50.00%), Query Frame = -2

Query:   26 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNL 289
            S N FFG  P  +     L  +  +SN+FSG +P+ +    +LE LD       G +P S  +L +LK L LS N   G +PK+   L
Sbjct:  133 SVNSFFGTFPYGLGMATGLTHVNASSNNFSGFLPEDLGNATTLEVLDFRGGYFEGSVPSSFKNLKNLKFLGLSGNNFGGKVPKVIGEL 220

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: IRK_ARATH (Probable LRR receptor-like serine/threonine-protein kinase IRK OS=Arabidopsis thaliana GN=IRK PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.605e-13
Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            + N   G+IP SISS  +L  L L+SN FSGS+P  + +L +L +LDLS N L G+ P+ ++ L +L+ LDLS N+L+G +P
Sbjct:  151 AKNKLTGKIPVSISSCSSLAALNLSSNGFSGSMPLGIWSLNTLRSLDLSRNELEGEFPEKIDRLNNLRALDLSRNRLSGPIP 232

HSP 2 Score: 72.4034 bits (176), Expect = 1.790e-13
Identity = 58/146 (39.73%), Postives = 82/146 (56.16%), Query Frame = -2

Query:   44 LASWDFSD-DPCAVPHRTRFICGVSCSPDATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRI-PSSISSLRNLQTLILTSNSFSGSIPDS-VTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 472
            LASW+  D  PC+         GV C P   R+T++ LD    SG++   + QL  L  L LS+N   G I P+ + SL NL+ + L+SN  SGS+PD       SL  L L+ N L+GK+P S++S +SL  L+LS N  +G +P
Sbjct:   46 LASWNEDDYTPCS-------WNGVKCHPRTNRVTELNLDGFSLSGRIGRGLLQLQFLHKLSLSNNNLTGIINPNMLLSLVNLKVVDLSSNGLSGSLPDEFFRQCGSLRVLSLAKNKLTGKIPVSISSCSSLAALNLSSNGFSGSMP 184

HSP 3 Score: 67.781 bits (164), Expect = 5.264e-12
Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = -2

Query:   11 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 289
            S N   G IPS I S   L+T+ L+ NS SGS+P++   L    +L+L  NAL G++PK +  + SL+ LDLS NK +G +P    NLL L +
Sbjct:  223 SRNRLSGPIPSEIGSCMLLKTIDLSENSLSGSLPNTFQQLSLCYSLNLGKNALEGEVPKWIGEMRSLETLDLSMNKFSGQVPDSIGNLLALKV 315

HSP 4 Score: 66.2402 bits (160), Expect = 1.614e-11
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = -2

Query:   44 NYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 283
            N   G +P  I  +R+L+TL L+ N FSG +PDS+  L +L+ L+ S N L G LP S  +  +L  LDLS N LTG LP
Sbjct:  273 NALEGEVPKWIGEMRSLETLDLSMNKFSGQVPDSIGNLLALKVLNFSGNGLIGSLPVSTANCINLLALDLSGNSLTGKLP 352

HSP 5 Score: 66.2402 bits (160), Expect = 1.734e-11
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
             +N   G IPSSI +  +L++LIL+ N   GSIP  +  L  LE +DLS N L+G LPK L +L  L   ++S+N L G LP
Sbjct:  456 ENNLLEGNIPSSIKNCSSLRSLILSHNKLLGSIPPELAKLTRLEEVDLSFNELAGTLPKQLANLGYLHTFNISHNHLFGELP 537

HSP 6 Score: 65.855 bits (159), Expect = 2.227e-11
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = -2

Query:   26 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNL 289
            S N   G IP       +L+ L L +N   G+IP S+    SL +L LSHN L G +P  L  LT L+ +DLS+N+L G LPK  +NL
Sbjct:  432 SHNQLNGMIPRETGGAVSLEELRLENNLLEGNIPSSIKNCSSLRSLILSHNKLLGSIPPELAKLTRLEEVDLSFNELAGTLPKQLANL 519

HSP 7 Score: 63.5438 bits (153), Expect = 1.242e-10
Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S N F G +P  I SL  L++L L+ N   G  P+ +  L +L  LDLS N LSG +P  + S   LK +DLS N L+G LP
Sbjct:  175 SSNGFSGSMPLGIWSLNTLRSLDLSRNELEGEFPEKIDRLNNLRALDLSRNRLSGPIPSEIGSCMLLKTIDLSENSLSGSLP 256

HSP 8 Score: 62.7734 bits (151), Expect = 2.594e-10
Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = -2

Query:    2 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPS---NLLELALKAN 289
            S+N   G +P++   L    +L L  N+  G +P  +  ++SLETLDLS N  SG++P S+ +L +LK L+ S N L G LP   +   NLL L L  N
Sbjct:  247 SENSLSGSLPNTFQQLSLCYSLNLGKNALEGEVPKWIGEMRSLETLDLSMNKFSGQVPDSIGNLLALKVLNFSGNGLIGSLPVSTANCINLLALDLSGN 345

HSP 9 Score: 60.8474 bits (146), Expect = 9.275e-10
Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S N   G IPS+I  L++L  L ++ N  +G IP       SLE L L +N L G +P S+ + +SL+ L LS+NKL G +P
Sbjct:  408 SRNSLTGPIPSTIGELKHLSVLDVSHNQLNGMIPRETGGAVSLEELRLENNLLEGNIPSSIKNCSSLRSLILSHNKLLGSIP 489

HSP 10 Score: 60.077 bits (144), Expect = 1.604e-9
Identity = 34/83 (40.96%), Postives = 45/83 (54.22%), Query Frame = -2

Query:   41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289
            S N   G  P  I  L NL+ L L+ N  SG IP  + +   L+T+DLS N+LSG LP +   L+    L+L  N L G +PK
Sbjct:  199 SRNELEGEFPEKIDRLNNLRALDLSRNRLSGPIPSEIGSCMLLKTIDLSENSLSGSLPNTFQQLSLCYSLNLGKNALEGEVPK 281

HSP 11 Score: 54.6842 bits (130), Expect = 9.999e-8
Identity = 37/110 (33.64%), Postives = 53/110 (48.18%), Query Frame = -2

Query:   11 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIP-----------------DSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 289
            S N   G +P S ++  NL  L L+ NS +G +P                 +S   +K ++ LDLSHNA SG++   L  L  L+ L LS N LTG +P     L  L++
Sbjct:  319 SGNGLIGSLPVSTANCINLLALDLSGNSLTGKLPMWLFQDGSRDVSALKNDNSTGGIKKIQVLDLSHNAFSGEIGAGLGDLRDLEGLHLSRNSLTGPIPSTIGELKHLSV 428

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.713e-13
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = -2

Query:    2 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSN---LLELALKAN 286
            DN   G +P  +  L+NL+ ++L  N+  G IP+ +  +KSL  +DLS N  SG +PKS  +L++L+ L LS N +TG +P + SN   L++  + AN
Sbjct:  284 DNDLSGTLPKELGKLQNLEKMLLWQNNLHGPIPEEIGFMKSLNAIDLSMNYFSGTIPKSFGNLSNLQELMLSSNNITGSIPSILSNCTKLVQFQIDAN 381

HSP 2 Score: 68.1662 bits (165), Expect = 4.741e-12
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = -2

Query:   17 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLEL 286
            +N   G IP  I  L+NL  L L+ N+ SG +P  ++  + L+ L+LS+N L G LP SL+SLT L+ LD+S N LTG +P    +L+ L
Sbjct:  476 NNRITGEIPKGIGFLQNLSFLDLSENNLSGPVPLEISNCRQLQMLNLSNNTLQGYLPLSLSSLTKLQVLDVSSNDLTGKIPDSLGHLISL 565

HSP 3 Score: 67.781 bits (164), Expect = 5.931e-12
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = -2

Query:   41 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 289
            S+N   G +P S+SSL  LQ L ++SN  +G IPDS+  L SL  L LS N+ +G++P SL   T+L+ LDLS N ++G +P+
Sbjct:  523 SNNTLQGYLPLSLSSLTKLQVLDVSSNDLTGKIPDSLGHLISLNRLILSKNSFNGEIPSSLGHCTNLQLLDLSSNNISGTIPE 605

HSP 4 Score: 65.4698 bits (158), Expect = 3.235e-11
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = -2

Query:   11 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLPSNLLELAL 289
            S NY  G +P+ +  LRNL  L+L SN+ SG IP  +    SL  L L +N ++G++PK +  L +L  LDLS N L+G +P   SN  +L +
Sbjct:  427 SQNYLTGSLPAGLFQLRNLTKLLLISNAISGVIPLEIGNCTSLVRLRLVNNRITGEIPKGIGFLQNLSFLDLSENNLSGPVPLEISNCRQLQM 519

HSP 5 Score: 63.929 bits (154), Expect = 1.142e-10
Identity = 41/99 (41.41%), Postives = 62/99 (62.63%), Query Frame = -2

Query:    2 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLE-TLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKLP--SNLLELALKAN 289
            S N F G IPSS+    NLQ L L+SN+ SG+IP+ +  ++ L+  L+LS N+L G +P+ +++L  L  LD+S+N L+G L  L    NL+ L +  N
Sbjct:  571 SKNSFNGEIPSSLGHCTNLQLLDLSSNNISGTIPEELFDIQDLDIALNLSWNSLDGFIPERISALNRLSVLDISHNMLSGDLSALSGLENLVSLNISHN 669

HSP 6 Score: 61.6178 bits (148), Expect = 5.703e-10
Identity = 42/117 (35.90%), Postives = 64/117 (54.70%), Query Frame = -2

Query:   41 DATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 391
            + T++ Q  +D    SG + P I  L +L       N   G IP  ++  +NLQ L L+ N  +GS+P  +  L++L  L L  NA+SG +P  + + TSL RL L  N++TG +PK
Sbjct:  369 NCTKLVQFQIDANQISGLIPPEIGLLKELNIFLGWQNKLEGNIPDELAGCQNLQALDLSQNYLTGSLPAGLFQLRNLTKLLLISNAISGVIPLEIGNCTSLVRLRLVNNRITGEIPK 485

HSP 7 Score: 56.9954 bits (136), Expect = 1.634e-8
Identity = 51/145 (35.17%), Postives = 74/145 (51.03%), Query Frame = -2

Query:   44 LASWDFSD-DPCAVPHRTRFICGVSCSP-DATRITQITLDPIGYSGXXXXXXXXXXXXXXXXLSDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 472
             + W+ SD DPC  P+       ++CS  D   +T+I +  +  +    P IS  T L  L +S+    G I S I     L  + L+SNS  G IP S+  LK+L+ L L+ N L+GK+P  L    SLK L++  N L+  LP
Sbjct:   58 FSGWNPSDSDPCQWPY-------ITCSSSDNKLVTEINVVSVQLALPFPPNISSFTSLQKLVISNTNLTGAISSEIGDCSELIVIDLSSNSLVGEIPSSLGKLKNLQELCLNSNGLTGKIPPELGDCVSLKNLEIFDNYLSENLP 195

HSP 8 Score: 56.9954 bits (136), Expect = 1.648e-8
Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = -2

Query:   41 GRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPK 271
            G+IP  I + RNL+ L L +   SGS+P S+  L  L++L +    LSG++PK L + + L  L L  N L+G LPK
Sbjct:  217 GKIPEEIGNCRNLKVLGLAATKISGSLPVSLGQLSKLQSLSVYSTMLSGEIPKELGNCSELINLFLYDNDLSGTLPK 293

HSP 9 Score: 56.225 bits (134), Expect = 2.631e-8
Identity = 39/106 (36.79%), Postives = 48/106 (45.28%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPD------------------------SVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S NYF G IP S  +L NLQ L+L+SN+ +GSIP                          +  LK L       N L G +P  L    +L+ LDLS N LTG LP
Sbjct:  331 SMNYFSGTIPKSFGNLSNLQELMLSSNNITGSIPSILSNCTKLVQFQIDANQISGLIPPEIGLLKELNIFLGWQNKLEGNIPDELAGCQNLQALDLSQNYLTGSLP 436

HSP 10 Score: 56.225 bits (134), Expect = 2.750e-8
Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = -2

Query:    2 GRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLPKL---PSNLLELALKAN 271
            G IP  + +   L  L L  N  SG++P  +  L++LE + L  N L G +P+ +  + SL  +DLS N  +G +PK     SNL EL L +N
Sbjct:  265 GEIPKELGNCSELINLFLYDNDLSGTLPKELGKLQNLEKMLLWQNNLHGPIPEEIGFMKSLNAIDLSMNYFSGTIPKSFGNLSNLQELMLSSN 357

HSP 11 Score: 55.0694 bits (131), Expect = 7.543e-8
Identity = 28/81 (34.57%), Postives = 47/81 (58.02%), Query Frame = -2

Query:   44 DNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSVTALKSLETLDLSHNALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 286
             N   G IP  I  +++L  + L+ N FSG+IP S   L +L+ L LS N ++G +P  L++ T L +  +  N+++G +P
Sbjct:  308 QNNLHGPIPEEIGFMKSLNAIDLSMNYFSGTIPKSFGNLSNLQELMLSSNNITGSIPSILSNCTKLVQFQIDANQISGLIP 388

HSP 12 Score: 54.299 bits (129), Expect = 1.241e-7
Identity = 39/107 (36.45%), Postives = 53/107 (49.53%), Query Frame = -2

Query:   44 SDNYFFGRIPSSISSLRNLQTLILTSNSFSGSIPDSV---TALKSLETLD--LSHN--------------------ALSGKLPKSLNSLTSLKRLDLSYNKLTGFLP 289
            S N   G IPSS+  L+NLQ L L SN  +G IP  +    +LK+LE  D  LS N                     LSGK+P+ + +  +LK L L+  K++G LP
Sbjct:  138 SSNSLVGEIPSSLGKLKNLQELCLNSNGLTGKIPPELGDCVSLKNLEIFDNYLSENLPLELGKISTLESIRAGGNSELSGKIPEEIGNCRNLKVLGLAATKISGSLP 244

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2QYH5_GOSRA	4.956e-88	98.31	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061E129_THECC	2.269e-69	79.66	Leucine-rich repeat (LRR) family protein OS=Theobr...	[more]
B9HS48_POPTR	4.610e-69	77.40	Uncharacterized protein OS=Populus trichocarpa GN=...	[more]
B9GHD2_POPTR	1.939e-67	76.27	Uncharacterized protein OS=Populus trichocarpa GN=...	[more]
A0A0D2VAM6_GOSRA	2.350e-67	80.34	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
C6ZS02_SOYBN	7.996e-63	75.14	Leucine-rich repeat disease resistance protein OS=...	[more]
B9RYA6_RICCO	1.383e-61	77.53	Serine-threonine protein kinase, plant-type, putat...	[more]
Q9SHU4_ARATH	1.275e-60	69.66	Leucine-rich repeat-containing protein OS=Arabidop...	[more]
Q8LDD9_ARATH	1.623e-60	69.66	Putative leucine-rich repeat disease resistance pr...	[more]
V7BEZ1_PHAVU	5.534e-60	72.88	Uncharacterized protein OS=Phaseolus vulgaris GN=P...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0005130 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
NIK1_ARATH	4.572e-14	46.51	Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis th...	[more]
Y5457_ARATH	6.263e-14	39.19	Probable LRR receptor-like serine/threonine-protei...	[more]
CLV2_ARATH	9.876e-14	50.59	Leucine-rich repeat receptor-like protein CLAVATA2...	[more]
Y1421_ARATH	1.254e-13	36.36	Putative inactive receptor-like protein kinase At1...	[more]
PLRX2_ARATH	1.277e-13	40.74	Pollen-specific leucine-rich repeat extensin-like ...	[more]
NIK2_ARATH	1.291e-13	43.37	Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis th...	[more]
BAME3_ARATH	1.306e-13	46.34	Leucine-rich repeat receptor-like serine/threonine...	[more]
PXL1_ARATH	1.548e-13	43.04	Leucine-rich repeat receptor-like protein kinase P...	[more]
IRK_ARATH	1.605e-13	46.34	Probable LRR receptor-like serine/threonine-protei...	[more]
RCH1_ARATH	1.713e-13	38.78	LRR receptor-like serine/threonine-protein kinase ...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00019	LEURICHRPT	coord: 43..56 score: 56.59 coord: 22..35 score: 54.32
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 1..75
None	No IPR available	PANTHER	PTHR27000:SF170	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 1..75
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 43..66 e-value: 1.1 score: 18.2 coord: 19..42 e-value: 19.0 score: 11.0
IPR032675	Leucine-rich repeat domain, L domain-like	GENE3D	3.80.10.10		coord: 3..69 e-value: 3.0E-19 score: 68.3
IPR032675	Leucine-rich repeat domain, L domain-like	SUPERFAMILY	52058	L domain-like	coord: 3..70
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 2..56 e-value: 4.6E-11 score: 42.2
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 45..67 score: 6.88
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 21..44 score: 7.227

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0005130 ID=g.arboreum_cottongen_reftransV1_0005130; Name=g.arboreum_cottongen_reftransV1_0005130; organism=Gossypium arboreum; type=contig; length=533bp
AATTTGCTTTTAAAGCAAGTTCCAATAAATTAGACGGCAGTTTCGGTAGA
AATCCAGTGAGTTTGTTGTAACTCAGGTCGAGCCTCTTTAAACTCGTAAG
TGAGTTAAGTGATTTCGGTAATTTCCCGGAAAGAGCATTATGAGAAAGGT
CTAATGTTTCAAGCGATTTGAGAGCCGTGACTGAGTCAGGAATCGAGCCG
GAAAACGAGTTGGATGTTAGAATCAGAGTCTGGAGATTACGTAGAGAAGA
AATGGAAGAAGGTATACGACCGAAGAAATAGTTATCAGAGAGATCGAGTG
TGGTGAGTTGGGTGAGTTGTGAAATGAGTGGGGTGAGTTGACCCGAGTAA
CCAATAGGATCAAGCGTGATTTGGGTGATACGAGTGGCGTCCGGCGAGCA
AGAAACGCCACAAATAAAGCGAGTACGGTGGGGGACGGCGCAAGGGTCGT
CGGAAAAGTCCCATGAAGCTAGGCAAGACCATGATGGGATTGAGCTTTGT
TTGATCGAGGATTTAAAGGCTTTTAAAGCTGAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

g.arboreum_cottongen_reftransV1_0005130, g.arboreum_cottongen_reftransV1_0005130 (contig) Gossypium arboreum

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