g.arboreum_cottongen_reftransV1_0006523, g.arboreum_cottongen_reftransV1_0006523 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: I1JF25_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 410.994 bits (1055), Expect = 2.265e-140 Identity = 190/249 (76.31%), Postives = 214/249 (85.94%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 KIMFVGDSLSLNMWES++CM+HASVPN+ T+FVR+ +S V FEDYGVT+ LYRTPYLVDI +E+VG VL L SIK G+AW GMD+LIFNSWHWWTHKG SQGWDYIRDGS L KDM+RL+A+ KGL TWA WVD N+D KTKV FQGISPTHY+G+EWNQP+KSC GE EPL+G+TY AG PPAA IVNKVL +M VYLLDIT LSQLRKDAHPS Y DH+GNDCSHWCLPGLPDTWN+LLYAA Sbjct: 120 KIMFVGDSLSLNMWESLSCMLHASVPNATTSFVRRQAISTVTFEDYGVTIQLYRTPYLVDIDREDVGRVLTLNSIKAGDAWTGMDMLIFNSWHWWTHKGDSQGWDYIRDGSNLVKDMDRLDAFFKGLTTWAGWVDQNIDLNKTKVLFQGISPTHYQGQEWNQPRKSCSGELEPLAGSTYPAGLPPAANIVNKVLKNMKNQVYLLDITLLSQLRKDAHPSVYGVDHTGNDCSHWCLPGLPDTWNELLYAA 368
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: X2KY70_CITSI (TBL1 OS=Citrus sinensis PE=2 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 3.157e-140 Identity = 191/249 (76.71%), Postives = 214/249 (85.94%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 +IMFVGDSLSLNMWES++CMIHASVPN+KT+FVRK LS V FE+YGVT LYRTPYLVDIVK+ VG VL L SI+ G W MD+LIFNSWHWWTH GK+Q WDYI+DG L KDM+RLEA+ KG++TWA WVD +VD +KTKVFFQGISPTHY G+EWN KK+C GE EPLSG+TY GAPPAA++VNKVL +NKPVYLLDITTLSQLRKDAHPSTYSG HSG DCSHWCLPGLPDTWNQLLYAA Sbjct: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTFLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLDVDPSKTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSPINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAA 363
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A067GDZ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017263mg PE=4 SV=1) HSP 1 Score: 410.223 bits (1053), Expect = 5.422e-140 Identity = 192/249 (77.11%), Postives = 215/249 (86.35%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 +IMFVGDSLSLNMWES++CMIHASVPN+KT+FVRK LS V FE+YGVTL LYRTPYLVDIVK+ VG VL L SI+ G W MD+LIFNSWHWWTH GK+Q WDYI+DG L KDM+RLEA+ KG++TWA WVD NVD ++TKVFFQGISPTHY G+EWN KK+C GE EPLSG+TY GAPPAA++VNKVL S+NKPVYLLDITTLSQLRKDAHPSTYSG HSG DCSHWCLPGLPDT NQLLYAA Sbjct: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTRNQLLYAA 363
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A067GQW8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017263mg PE=4 SV=1) HSP 1 Score: 409.838 bits (1052), Expect = 7.012e-140 Identity = 193/251 (76.89%), Postives = 216/251 (86.06%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQ--GWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 +IMFVGDSLSLNMWES++CMIHASVPN+KT+FVRK LS V FE+YGVTL LYRTPYLVDIVK+ VG VL L SI+ G W MD+LIFNSWHWWTH GK+Q WDYI+DG L KDM+RLEA+ KG++TWA WVD NVD ++TKVFFQGISPTHY G+EWN KK+C GE EPLSG+TY GAPPAA++VNKVL S+NKPVYLLDITTLSQLRKDAHPSTYSG HSG DCSHWCLPGLPDTWNQLLYAA Sbjct: 115 RIMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFWKDMDVLIFNSWHWWTHTGKAQPRRWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDTWNQLLYAA 365
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0B2RKF9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032520 PE=4 SV=1) HSP 1 Score: 409.068 bits (1050), Expect = 1.281e-139 Identity = 189/249 (75.90%), Postives = 213/249 (85.54%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 KIMFVGDSLSLNMWES++CM+HASVPN+ T+FVR+ +S V FEDYGV + LYRTPYLVDI +E+VG VL L SIK G+AW GMD+LIFNSWHWWTHKG SQGWDYIRDGS L KDM+RL+A+ KGL TWA WVD N+D KTKV FQGISPTHY+G+EWNQP+KSC GE EPL+G+TY AG PPAA IVNKVL +M VYLLDIT LSQLRKDAHPS Y DH+GNDCSHWCLPGLPDTWN+LLYAA Sbjct: 120 KIMFVGDSLSLNMWESLSCMLHASVPNATTSFVRRQAISTVTFEDYGVIIQLYRTPYLVDIDREDVGRVLTLNSIKAGDAWTGMDMLIFNSWHWWTHKGDSQGWDYIRDGSNLVKDMDRLDAFFKGLTTWAGWVDQNIDLNKTKVLFQGISPTHYQGQEWNQPRKSCSGELEPLAGSTYPAGLPPAANIVNKVLKNMKNQVYLLDITLLSQLRKDAHPSVYGVDHTGNDCSHWCLPGLPDTWNELLYAA 368
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL38_ARATH (Protein trichome birefringence-like 38 OS=Arabidopsis thaliana GN=TBL38 PE=2 SV=1) HSP 1 Score: 412.92 bits (1060), Expect = 6.289e-143 Identity = 186/250 (74.40%), Postives = 223/250 (89.20%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGG-NAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 ++MFVGDSLSLNMWES+ACMIHASVPN+KTTF++++PLS + F++YGVTLYLYRTPY+VDI KE VG VLNLG+I+GG +AW MD+L+FNSWHWWTHKG+SQGWDYIRDGS+L +DMNRL+A+ KGL+TWA WVD NVD KT+VFFQGISPTHYEGREWN+P+K+C G+ +PL G++Y +G PP++ +V+KVL SM KPV LLDITTLSQLRKDAHPS+Y GD G DCSHWCLPGLPDTWNQLLYAA Sbjct: 129 RVMFVGDSLSLNMWESLACMIHASVPNAKTTFLKRTPLSTLTFQEYGVTLYLYRTPYIVDISKERVGRVLNLGAIEGGADAWKNMDVLVFNSWHWWTHKGQSQGWDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKTRVFFQGISPTHYEGREWNEPRKTCSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTLLDITTLSQLRKDAHPSSYGGD-GGTDCSHWCLPGLPDTWNQLLYAA 377
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL37_ARATH (Protein trichome birefringence-like 37 OS=Arabidopsis thaliana GN=TBL37 PE=2 SV=2) HSP 1 Score: 394.43 bits (1012), Expect = 1.418e-135 Identity = 180/251 (71.71%), Postives = 221/251 (88.05%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIK-GGNAWIGMDLLIFNSWHWWTHKG-KSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 ++MFVGDSLSLNMWES+ACMIH+SVPN+KTTF++++PLS + F++Y VTL+LYRTPYLVDI KE+VG VLNLG+I+ G +AW MDLL+FNSWHWWTH G +SQGWD+IRDGS+L +DM+RL+A+NKGL TW WVD NV+ ++T+VFFQGISPTHY GREWN+P+K+C G+ +PL+G+TY G+ PAA+IV++VL +M PVYLLDITTLSQLRKDAHPSTY GD G DCSHWCLPGLPDTWNQLLYAA Sbjct: 133 RVMFVGDSLSLNMWESLACMIHSSVPNTKTTFLKRTPLSSLTFQEYDVTLFLYRTPYLVDISKESVGRVLNLGAIEDGADAWKNMDLLVFNSWHWWTHTGVQSQGWDFIRDGSSLMRDMDRLDAFNKGLTTWGQWVDQNVNVSQTRVFFQGISPTHYMGREWNEPRKTCNGQMQPLTGSTYPGGSLPAASIVSRVLSTMRTPVYLLDITTLSQLRKDAHPSTYGGD-GGTDCSHWCLPGLPDTWNQLLYAA 382
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL40_ARATH (Protein trichome birefringence-like 40 OS=Arabidopsis thaliana GN=TBL40 PE=2 SV=2) HSP 1 Score: 340.502 bits (872), Expect = 1.061e-114 Identity = 154/249 (61.85%), Postives = 193/249 (77.51%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 KIM VGDSLSLNM+ES+AC++HAS+PN+K + R PL+ + F+DYGVT+ LYRT +LVD+V+E G VL L SIK +AW+GMD+LIFNSWHWWTH Q WDY+R+G+ LYKDMNRL AY KGL TWA W++ N+ ++T+VFFQG+SP HY+GREWN+P KSC G+ +P G Y G P +VNKVL + KPV+LLD+TTLS+ RKDAHPS Y+G DCSHWCLPGLPDTWN LLY++ Sbjct: 113 KIMMVGDSLSLNMFESLACLLHASLPNAKYSLRRSQPLTSLTFQDYGVTINLYRTQFLVDVVQEKAGRVLVLDSIKQADAWLGMDVLIFNSWHWWTHTSGLQPWDYMREGNQLYKDMNRLVAYYKGLNTWARWINNNIVPSRTQVFFQGVSPVHYDGREWNEPLKSCNGQTQPFMGQRYPGGLPLGWVVVNKVLSRIRKPVHLLDLTTLSEYRKDAHPSLYNGISKDLDCSHWCLPGLPDTWNLLLYSS 361
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL39_ARATH (Protein trichome birefringence-like 39 OS=Arabidopsis thaliana GN=TBL39 PE=2 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 2.170e-114 Identity = 156/249 (62.65%), Postives = 189/249 (75.90%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749 KIMFVGDSLS NMW+S+AC+IH+ VPN++ T +R+ L+ + FE+YGVTL LYRT +LVD+ E VG VL L SIK GN W GMD+LIFNSWHWWTH Q WDY+ DG+ LYKDMNRL A+ KG+ TWA WV+ VD +KTKVFF G+SPTHYEG++W +P SC + +P G Y G P A I+NKV+ + KPV+ LDIT LSQLRKDAHPS +SG+H GNDCSHWCLPGLPDTWN L Y+ Sbjct: 115 KIMFVGDSLSTNMWQSLACLIHSWVPNTRYTLIRQKGLASLTFEEYGVTLLLYRTQFLVDLNVEKVGRVLKLDSIKQGNMWRGMDVLIFNSWHWWTHTEHIQPWDYMEDGNRLYKDMNRLVAFYKGMTTWARWVNAYVDPSKTKVFFNGVSPTHYEGKDWGEPMNSCRSQTQPFYGRKYPGGTPMAWVILNKVMRRLKKPVHWLDITGLSQLRKDAHPSAFSGNHPGNDCSHWCLPGLPDTWNLLFYST 363
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL41_ARATH (Protein trichome birefringence-like 41 OS=Arabidopsis thaliana GN=TBL41 PE=2 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 6.373e-98 Identity = 139/250 (55.60%), Postives = 178/250 (71.20%), Query Frame = -3 Query: 9 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQP-KKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTY--SGDHSGNDCSHWCLPGLPDTWNQLLY 749 KIMFVGDSLSLN W+S+ACM+H+SVPNS T + +S F++YG+ L L R YLVDIV+E +G VL L SI G W+ MD LIFN+WHWW+ +G +Q WD I+ G+ + KDM+R+ A+ L TW WVDT ++ KT+VFFQGISP+HY+G W +P KSC G++EPL GT Y G P ++ + LG ++KPV LLDIT LS LRKDAHPS Y G +S DCSHWCL G+PDTWN++LY Sbjct: 102 KIMFVGDSLSLNQWQSLACMLHSSVPNSTYTLTTQGSISTYTFKEYGLELKLDRNVYLVDIVREKIGRVLKLDSINDGKNWVEMDTLIFNTWHWWSRRGPAQPWDLIQIGTNVTKDMDRVAAFEIALGTWGKWVDTVLNTKKTRVFFQGISPSHYKGVLWGEPAAKSCVGQKEPLLGTKYPGGLPAEVGVLKRALGKISKPVTLLDITMLSLLRKDAHPSVYGLGGRNSSGDCSHWCLSGVPDTWNEILY 351
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL42_ARATH (Protein trichome birefringence-like 42 OS=Arabidopsis thaliana GN=TBL42 PE=3 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 2.841e-91 Identity = 126/251 (50.20%), Postives = 173/251 (68.92%), Query Frame = -3 Query: 3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENV-GDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSG-NDCSHWCLPGLPDTWNQLLYAA 749 KI+FVGDSLS NMW S++CM+HA+VPN+K TF LS +YG+++ + +LVD+V + G +L L SI GN W+G D+ IFN++HWW+H G+++ WDY + G + K+MNR+EA+ L TW+ W+D N+D +KT+VF+QG+SP H G EW +P K+C GE P+ G +Y AIV V+G M KPV LLD+T ++++RKD HPS Y+G NDCSHWCLPG+PD WNQLLY A Sbjct: 105 KILFVGDSLSNNMWVSLSCMLHAAVPNAKYTFQLNKGLSTFTIPEYGISVNFLKNGFLVDLVSDKTRGLILKLDSISRGNQWLGSDVAIFNTFHWWSHTGRAKTWDYFQTGDKIVKEMNRMEAFKIALTTWSKWIDHNIDPSKTRVFYQGVSPVHLNGGEWGKPGKTCLGETVPVQGPSYPGRPNEGEAIVKSVIGRMAKPVELLDVTAMTEMRKDGHPSIYAGGGDRLNDCSHWCLPGVPDAWNQLLYTA 355
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL43_ARATH (Protein trichome birefringence-like 43 OS=Arabidopsis thaliana GN=TBL43 PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.384e-84 Identity = 126/252 (50.00%), Postives = 163/252 (64.68%), Query Frame = -3 Query: 6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRK-SPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQP--KKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYS-GDHSGNDCSHWCLPGLPDTWNQLLYA 749 K+MFVGDSLSLN W+S+ C++H + P + +T R S LS F Y ++ R +LVDIV V+ L SI G+ W D+L+FNSWHWW H + Q WD I G+ KDM+RL AY K + TWA W+D N+D +KTKVFFQGISP H REW++ K SC GE +P+ G++Y AG A +V KV+ +M L+D+T +SQLRKD HPS Y G H DCSHWCL G+PD+WNQLLY+ Sbjct: 112 KLMFVGDSLSLNQWQSLTCLLHNAAPKANSTSTRSPSGLSVFSFPAYNSSIMFSRNAFLVDIVGAPPKRVMKLDSISSGSLWKTADVLVFNSWHWWLHTDRKQPWDAIMSGNVTVKDMDRLVAYEKAMMTWAKWIDQNIDPSKTKVFFQGISPDHGRAREWSKQGGKGSCIGETKPIMGSSYLAGPHAAEMVVAKVIKTMKNQARLMDVTLMSQLRKDGHPSVYGFGGHRMADCSHWCLSGVPDSWNQLLYS 363
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL44_ARATH (Protein PMR5 OS=Arabidopsis thaliana GN=PMR5 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 2.258e-83 Identity = 132/262 (50.38%), Postives = 168/262 (64.12%), Query Frame = -3 Query: 9 IMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKG-GNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREW----NQPKKSCYGEQEPLSGTTYQAGA--PPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGN---------DCSHWCLPGLPDTWNQLLY 746 IMF GDSL N WES+ C+I +S P+++T R PLS F DYG+T+ Y+ P+LVDI VL L I G NAW DLLIFN+ HWW+H G QGWD I+ G++ Y+DM+R A K L TWA WV+T+VD+++T+V F ISPTH +W + K+CYGE EP++GT Y + +++ +VL M+ P +LLDIT LS LRKD HPS YSG SG+ DCSHWCLPGLPDTWNQLLY Sbjct: 136 IMFAGDSLGKNQWESLICLIVSSAPSTRTEMTRGLPLSTFRFLDYGITMSFYKAPFLVDIDAVQGKRVLKLDEISGNANAWHDADLLIFNTGHWWSHTGSMQGWDLIQSGNSYYQDMDRFVAMEKALRTWAYWVETHVDRSRTQVLFLSISPTHDNPSDWAASSSSGSKNCYGETEPITGTAYPVSSYTDQLRSVIVEVLHGMHNPAFLLDITLLSSLRKDGHPSVYSGLISGSQRSRPDQSADCSHWCLPGLPDTWNQLLY 397
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL45_ARATH (Protein trichome birefringence-like 45 OS=Arabidopsis thaliana GN=TBL45 PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 5.215e-76 Identity = 127/269 (47.21%), Postives = 156/269 (57.99%), Query Frame = -3 Query: 3 IMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLG--SIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREW---------NQPKKSCYGEQEPLSGTTYQAGA-PPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGD---------HSGNDCSHWCLPGLPDTWNQLLYAA 746 IMFVGDSL N WES+ CMI +S P+ T + + PLS DY V + YR PYLVDI K N L L S+ NAW D+L+FN+ HWW+H G +GW+ + G Y DM+RL A KGL TW++WV ++ T+VFF +SPTHY EW Q KSCYG+ P SGTTY + +++ V+ M V L+DIT LS LR D HPS YSGD +DCSHWCLPGLPDTWNQL YAA Sbjct: 127 IMFVGDSLGRNQWESLICMISSSAPSINTHIIHEDPLSTFKILDYNVKVSFYRAPYLVDIDKINGKTTLKLDEISVDASNAWRTADVLLFNTGHWWSHTGSLRGWEQMETGGRYYGDMDRLVALRKGLGTWSSWVLRYINSPLTRVFFLSVSPTHYNPNEWTSRSKTSTITQGGKSCYGQTTPFSGTTYPTSSYVNQKKVIDDVVKEMKSHVSLMDITMLSALRVDGHPSIYSGDLNPSLKRNPDRSSDCSHWCLPGLPDTWNQLFYAA 395
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBR_ARATH (Protein trichome birefringence OS=Arabidopsis thaliana GN=TBR PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.702e-60 Identity = 105/271 (38.75%), Postives = 154/271 (56.83%), Query Frame = -3 Query: 6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSF-------VIFEDYGVTLYLYRTPYLV---DIV--KENVGDVLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSG----------NDCSHWCLPGLPDTWNQLLYA 749 +++FVGDSL+ NMWES+ C++ SV + + + F +F+DY T+ + +P+LV +IV K + L L + K + G D+++FN+ HWWTH+ S+G DY ++GS +Y ++ LEA+ K L TW WV+ NV+ K+ VFF+G S +H+ G +WN +C E EP+ TY P ++ KVL M PV L+IT L+ RKD HPS Y DCSHWCLPG+PD+WN++LYA Sbjct: 323 RLVFVGDSLNRNMWESLVCILKGSVKDETKVYEARGRHHFRGEAEYSFVFQDYNCTVEFFVSPFLVQEWEIVDKKGTKKETLRLDLVGKSSEQYKGADVIVFNTGHWWTHEKTSKGEDYYQEGSNVYHELAVLEAFRKALTTWGRWVEKNVNPAKSLVFFRGYSASHFSGGQWNS-GGACDSETEPIKNDTYLTPYPSKMKVLEKVLRGMKTPVTYLNITRLTDYRKDGHPSVYRKQSLSEKEKKSPLLYQDCSHWCLPGVPDSWNEILYA 592 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0006523 ID=g.arboreum_cottongen_reftransV1_0006523; Name=g.arboreum_cottongen_reftransV1_0006523; organism=Gossypium arboreum; type=contig; length=751bpback to top |