g.arboreum_cottongen_reftransV1_0006523, g.arboreum_cottongen_reftransV1_0006523 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0006523
Unique Nameg.arboreum_cottongen_reftransV1_0006523
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length751
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr9chromosomeg.arboreum_cottongen_reftransV1_0006523:1..751 .
Chr9:62165428..62167137 +
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0B0P859_GOSAR (Enolase OS=Gossypium arboreum GN=F383_25667 PE=4 SV=1)

HSP 1 Score: 520.39 bits (1339), Expect = 0.000e+0
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  114 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 362          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0D2VHM4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G033800 PE=4 SV=1)

HSP 1 Score: 510.76 bits (1314), Expect = 1.057e-179
Identity = 243/249 (97.59%), Postives = 246/249 (98.80%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQ WDYIRDGSALYKDMNRLEAYNKGL TWANWVDTNVD TKTKVFFQGISPTHYEGREWNQPK+SCYGEQEPLSG+TYQAGAPP+AAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  114 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQAWDYIRDGSALYKDMNRLEAYNKGLTTWANWVDTNVDPTKTKVFFQGISPTHYEGREWNQPKRSCYGEQEPLSGSTYQAGAPPSAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 362          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A061GDR4_THECC (Trichome birefringence-like 37 isoform 1 OS=Theobroma cacao GN=TCM_029724 PE=4 SV=1)

HSP 1 Score: 452.981 bits (1164), Expect = 5.585e-157
Identity = 221/249 (88.76%), Postives = 235/249 (94.38%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES+ACMIHASVPNSKTT+VRK PLSFVIFEDY VTLYLYRTPYLVDIV+E+VG VLNLGSI GGNAW GMD+L+FNSWHWWTHKGKSQ WDYIRDGS LYKDM+R  A+NKGL TWANWVD+NVD TKTKVFFQGISPTHYEGREWNQPKK+CYGE EPLSG+TY AGAPPAAAI+NKVLG+M KPVYLLDITTLSQLRKDAHPSTYSG+HSGNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  112 KIMFVGDSLSLNMWESLACMIHASVPNSKTTYVRKDPLSFVIFEDYAVTLYLYRTPYLVDIVRESVGAVLNLGSINGGNAWKGMDMLVFNSWHWWTHKGKSQAWDYIRDGSELYKDMDRFVAFNKGLTTWANWVDSNVDPTKTKVFFQGISPTHYEGREWNQPKKNCYGELEPLSGSTYPAGAPPAAAILNKVLGTMKKPVYLLDITTLSQLRKDAHPSTYSGEHSGNDCSHWCLPGLPDTWNQLLYAA 360          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0D2UI90_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G242200 PE=4 SV=1)

HSP 1 Score: 446.817 bits (1148), Expect = 1.789e-154
Identity = 210/249 (84.34%), Postives = 226/249 (90.76%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES+ CMIHASVPNSKTT+VR+ PLSFV FE+YGVTLY+YRTPYLVDIV+E VG VL+L SI GG AW GMD+LIFNSWHWWTHKGKSQ WDYIRDGSAL+KDMNRL AY KGL+TWA WVDTNVD TKTKVFFQGISPTHYEGREWNQPK+SC GE +PLSG+ Y  GAPPA+AIVN +L  M KPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPD+WNQLLYAA
Sbjct:  122 KIMFVGDSLSLNMWESLVCMIHASVPNSKTTYVRRDPLSFVNFEEYGVTLYVYRTPYLVDIVREKVGAVLHLNSINGGKAWKGMDVLIFNSWHWWTHKGKSQAWDYIRDGSALHKDMNRLLAYYKGLSTWAKWVDTNVDTTKTKVFFQGISPTHYEGREWNQPKRSCNGELQPLSGSKYPVGAPPASAIVNTILRKMMKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDSWNQLLYAA 370          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: I1MER4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 424.861 bits (1091), Expect = 8.639e-146
Identity = 197/249 (79.12%), Postives = 218/249 (87.55%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES++CMIHASVPN+KT F+RK  LS V F+DYGVT+ LYRTPYLVDI++ENVG VL L SI  GNAW GMD+LIFNSWHWWTH GKSQGWDYIRDG  L K+M+RLEAYNKGL TWANWVD NVD +KTKVFFQGISPTHY+G++WNQPK+SC GE +PLSG+TY AG PPA  I+N VL  M+ PVYLLDIT LSQLRKDAHPS YSGDH+GNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  124 KIMFVGDSLSLNMWESLSCMIHASVPNAKTGFLRKESLSTVTFQDYGVTIQLYRTPYLVDIIRENVGRVLTLDSIVAGNAWKGMDMLIFNSWHWWTHTGKSQGWDYIRDGPNLVKNMDRLEAYNKGLTTWANWVDQNVDPSKTKVFFQGISPTHYQGKDWNQPKRSCSGELQPLSGSTYPAGLPPATTILNNVLRKMSTPVYLLDITLLSQLRKDAHPSAYSGDHAGNDCSHWCLPGLPDTWNQLLYAA 372          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0B2QGL0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_036096 PE=4 SV=1)

HSP 1 Score: 424.091 bits (1089), Expect = 1.130e-145
Identity = 197/249 (79.12%), Postives = 218/249 (87.55%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES++CMIHASVPN+KT F+RK  LS V F+DYGVT+ LYRTPYLVDI++ENVG VL L SI  GNAW GMD+LIFNSWHWWTH GKSQGWDYIRDG  L K+M+RLEAYNKGL TWANWVD NVD +KTKVFFQGISPTHY+G++WNQPK+SC GE +PLSG+TY AG PPA  I+N VL  M+ PVYLLDIT LSQLRKDAHPS YSGDH+GNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  113 KIMFVGDSLSLNMWESLSCMIHASVPNAKTGFLRKESLSTVTFQDYGVTIQLYRTPYLVDIIRENVGRVLTLDSIVAGNAWKGMDMLIFNSWHWWTHTGKSQGWDYIRDGPNLVKNMDRLEAYNKGLTTWANWVDQNVDPSKTKVFFQGISPTHYQGKDWNQPKRSCSGELQPLSGSTYPAGLPPATTILNNVLRKMSTPVYLLDITLLSQLRKDAHPSAYSGDHAGNDCSHWCLPGLPDTWNQLLYAA 361          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: V7BPZ9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G177100g PE=4 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 2.501e-144
Identity = 194/249 (77.91%), Postives = 218/249 (87.55%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES++CMIHASVPN+K++F+RK  LS V F+DYGVT+ LYRTPYLVDI++E VG VL L SI  GNAW GMDLLIFNSWHWWTH GKSQGWDYIRDG  L K+M+RL+AYNKGL TWANWVD NVD TKTK+FFQGISPTHY+G++WNQP++SC GE +PLSG+TY AG PPA  I+N VL  MN  VYLLDIT LSQLRKDAHPS+YSGDH+GNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  113 KIMFVGDSLSLNMWESLSCMIHASVPNTKSSFLRKESLSTVTFQDYGVTIQLYRTPYLVDIIREKVGRVLTLNSIVAGNAWKGMDLLIFNSWHWWTHTGKSQGWDYIRDGPNLVKNMDRLDAYNKGLTTWANWVDQNVDTTKTKIFFQGISPTHYQGKDWNQPRRSCSGELQPLSGSTYPAGLPPATTILNNVLKKMNTQVYLLDITLLSQLRKDAHPSSYSGDHAGNDCSHWCLPGLPDTWNQLLYAA 361          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A067JB93_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21547 PE=4 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 6.007e-144
Identity = 193/249 (77.51%), Postives = 219/249 (87.95%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            +IMFVGDSLSLNMWES++CMIHASVPN+KT+ V +  L  V FEDYGVTL++YRTPYLVDIVKE+ G VL L SI+ G AW GMD+LIFNSWHWWTH GKSQ WDY+RDG ALYKDMNRLEA+ KGL+TWA WVD NVD +KTKVFFQGISPTHYEGR+WNQP+K+CYGE +PLSG+TY  GAPPA A+VN+V+ +M KP+YLLDITTLSQLRKDAHPSTYSG+ SG DCSHWCLPGLPD WNQLLYAA
Sbjct:  116 QIMFVGDSLSLNMWESLSCMIHASVPNAKTSRVNQDSLHSVTFEDYGVTLFMYRTPYLVDIVKESAGRVLLLDSIEAGKAWKGMDMLIFNSWHWWTHTGKSQPWDYMRDGPALYKDMNRLEAFYKGLSTWAKWVDLNVDPSKTKVFFQGISPTHYEGRDWNQPRKNCYGEAQPLSGSTYPGGAPPAVAVVNQVISTMKKPIYLLDITTLSQLRKDAHPSTYSGEGSGTDCSHWCLPGLPDIWNQLLYAA 364          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: R0IHR4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10009422mg PE=4 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 1.069e-143
Identity = 190/250 (76.00%), Postives = 223/250 (89.20%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGG-NAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            ++MFVGDSLSLNMWES+ CMIHASVPN+KTTF +++PLS + F+DYGVTLYLYRTPY+VDI KE VG VLNLG+I GG +AW  MD+L+FNSWHWWTHKG+SQGWDYIRDGS+L +DMNRL+A+ KGL+TWA WVD NVD TKT+VFFQGISPTHYEGREWN+P+KSC G+ +PL G++Y +G PP+A +V+KVLGSM KPV+LLDITTLSQLRKDAHPS+Y GD  G DCSHWCLPGLPDTWNQLLYAA
Sbjct:  133 RVMFVGDSLSLNMWESLGCMIHASVPNAKTTFTKRTPLSTLTFQDYGVTLYLYRTPYIVDIAKERVGRVLNLGAIDGGASAWKNMDVLVFNSWHWWTHKGQSQGWDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTTKTRVFFQGISPTHYEGREWNEPRKSCSGQMQPLGGSSYPSGQPPSAGVVSKVLGSMRKPVFLLDITTLSQLRKDAHPSSYGGD-GGTDCSHWCLPGLPDTWNQLLYAA 381          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: I3SYA8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 419.083 bits (1076), Expect = 1.171e-143
Identity = 196/249 (78.71%), Postives = 215/249 (86.35%), Query Frame = -3
Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES+ACMIHASVPN+KT+F+RK  LS V F+DYGVT+ LYRTPYLVDI++ENVG VL L SI  GNAW GMD+LIFNSWHWW H GKSQGWDYIRDG  L K+M+RLEAY KGL TWA WVD NVD +KTKVFFQGISPTHY+G+EWNQPK+SC G+ EPL+G+TY AG P AA I+N VL  MN PVYLLDIT LSQLRKDAHPSTY  DHSGNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  109 KIMFVGDSLSLNMWESLACMIHASVPNAKTSFLRKESLSTVTFQDYGVTIQLYRTPYLVDIIRENVGRVLTLDSIVAGNAWKGMDMLIFNSWHWWIHTGKSQGWDYIRDGPNLVKNMDRLEAYTKGLTTWARWVDLNVDPSKTKVFFQGISPTHYQGKEWNQPKRSCSGQLEPLAGSTYPAGLPQAANILNSVLKKMNNPVYLLDITLLSQLRKDAHPSTYGEDHSGNDCSHWCLPGLPDTWNQLLYAA 357          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL8_ARATH (Protein trichome birefringence-like 8 OS=Arabidopsis thaliana GN=TBL8 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.211e-46
Identity = 97/273 (35.53%), Postives = 142/273 (52.01%), Query Frame = -3
Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTF-VRKSPLS------FVIFEDYGVTLYLYRTPYLVDI----------VKENVG-DVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSM---NKPVYLLDITTLSQLRKDAHPSTY----SGDHSGNDCSHWCLPGLPDTWNQLLYA 749
            +I+FVGDS+  N WES+ CM+  +V N    + V  +P+S       + F +  +T+  +RTP+LV +          VK  V  D  N  S K    W+G D+L+FN+ HWW          Y ++G  L K M  +E + K L TW +WV   +D  ++ VFF+  SP HY    WN     C  + EP +        P     +++ +  M   +  V  L+IT L++ RKDAHPS Y    + + +  DCSHWCLPG+PDTWN++LYA
Sbjct:  150 RIVFVGDSIGRNQWESLLCMLSQAVSNKSEIYEVNGNPISKHKGFLSMRFPEQNLTVEYHRTPFLVVVGRPPENSPVDVKMTVRVDEFNWQSKK----WVGSDVLVFNTGHWWNEDKTFIAGCYFQEGGKLNKTMGVMEGFEKSLKTWKSWVLERLDSERSHVFFRSFSPVHYRNGTWNL-GGLCDADTEPETDMKKMEPDPIHNNYISQAIQEMRYEHSKVKFLNITYLTEFRKDAHPSRYREPGTPEDAPQDCSHWCLPGVPDTWNEILYA 417          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL3_ARATH (Protein trichome birefringence-like 3 OS=Arabidopsis thaliana GN=TBL3 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.778e-46
Identity = 87/272 (31.99%), Postives = 142/272 (52.21%), Query Frame = -3
Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVD------IVKENVGDVLNLGSIKG-GNAWIGMDLLIFNSWHWWTHKGKSQG-WDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKS-CYGEQEPLSGTTY--QAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTY--------SGDHSGN-----DCSHWCLPGLPDTWNQLLYA 749
            +++FVGDSL  + WES  C++ + +P  + +  R         ++Y  T+  Y  PY+V+      ++ +    ++ + S+K     W G D+L+FN++ WW    + +  W    +G +  + ++   AY  GL TWANWVD+ VD  KT+VFF  +SPTH    +W +P  + C+ E +P+    +           +V+ V+  M   V +++IT LS+ R DAH S Y        + +   +     DC HWCLPGLPDTWN++L A
Sbjct:  161 RLLFVGDSLQRSQWESFVCLVESIIPEGEKSMKRSQKYFVFKAKEYNATIEFYWAPYIVESNTDIPVISDPKKRIVKVDSVKDRAKFWEGADILVFNTYVWWMSGLRMKALWGSFGNGESGAEALDTQVAYRLGLKTWANWVDSTVDPNKTRVFFTTMSPTHTRSADWGKPNGTKCFNETKPIKDKKFWGTGSNKQMMKVVSSVIKHMTTHVTVINITQLSEYRIDAHTSVYTETGGKILTAEQRADPMHHADCIHWCLPGLPDTWNRILLA 432          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL33_ARATH (Protein trichome birefringence-like 33 OS=Arabidopsis thaliana GN=TBL33 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.729e-44
Identity = 95/275 (34.55%), Postives = 142/275 (51.64%), Query Frame = -3
Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVD------IVKENVGDVLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLE-----AYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREW-NQPKKSCYGEQEPLSGTTY--QAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGD------------HSGNDCSHWCLPGLPDTWNQLLYA 749
            ++M+VGDSL+  M+ SM C++H  +P  + +      L+    ++Y  T+  Y  P+L++      IV      V+  GSI K G  W G+D++IFN++ WW    K      I  GS   K+ N +E     AY  G+ +   WV  N+D+ KT+VFF  +SPTH +G +W  +P ++CY +   +   +Y           ++ +V G    P+ LL+IT +S  RKDAH S Y                S  DC HWCLPGL DTWN+LL+A
Sbjct:  150 RMMYVGDSLNRGMFVSMICLLHRLIPEDQKSIKTNGSLTVFTAKEYNATIEFYWAPFLLESNSDDAIVHRISDRVVRKGSINKHGRHWKGVDIIIFNTYLWWMTGLKMN----ILQGSFDDKEKNIVEVSTEDAYRMGMKSMLRWVKNNMDRKKTRVFFTSMSPTHAKGIDWGGEPGQNCYNQTTLIEDPSYWGSDCRKSIMKVIGEVFGRSKTPITLLNITQMSNYRKDAHTSIYKKQWSPLTAEQLENPTSYADCVHWCLPGLQDTWNELLFA 420          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL10_ARATH (Protein trichome birefringence-like 10 OS=Arabidopsis thaliana GN=TBL10 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 3.553e-44
Identity = 94/274 (34.31%), Postives = 146/274 (53.28%), Query Frame = -3
Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTF-VRKSPLS----FVIF--EDYGVTLYLYRTPYLVDIVKENVGD------VLNLGSIK-GGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAP-PAAAIVNKVLG-----SMNKPVYLLDITTLSQLRKDAHPSTYS-GDHS-----GNDCSHWCLPGLPDTWNQLLYA 749
            +++FVGDS+  N WES+ C++ ++V N    + +  SP++    F++F  E+Y  T+  YR+P+LV   +  +G        L L ++    + W   D+L+ N+ HWW     ++   Y ++G  +   MN  +AY + L T   W+ T +D  KT+VFF+  +P H+ G +W +   +C+ E  P  GT+  +        I+  VL      S    V LL+IT ++  RKD HPS Y  G H        DCSHWCLPG+PDTWN+L YA
Sbjct:  171 RLVFVGDSIGRNQWESLLCLLSSAVKNESLIYEINGSPITKHKGFLVFKFEEYNCTVEYYRSPFLVPQSRPPIGSPGKVKTSLKLDTMDWTSSKWRDADVLVLNTGHWWNEGKTTRTGCYFQEGEEVKLKMNVDDAYKRALNTVVKWIHTELDSNKTQVFFRTFAPVHFRGGDW-KTGGTCHMETLPEIGTSLASSETWEQLKILRDVLSHNSNRSETVKVKLLNITAMAAQRKDGHPSLYYLGPHGPAPLHRQDCSHWCLPGVPDTWNELFYA 443          
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL32_ARATH (Protein trichome birefringence-like 32 OS=Arabidopsis thaliana GN=TBL32 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.088e-43
Identity = 95/274 (34.67%), Postives = 143/274 (52.19%), Query Frame = -3
Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKEN-----VGD-VLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWD-YIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREW-NQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGS-----MNKPVYLLDITTLSQLRKDAHPSTY------------SGDHSGNDCSHWCLPGLPDTWNQLLYA 749
            K+MFVGDSL+  M+ S+ C++H+ +P +  +      L+    +DY  T+  Y  P+L++   +N     V D ++  GSI K G  W G D+++FN++ WW    K +  +   +D      +M   +AY   L T   WV  N+D  KT+VFF  +SPTHY+G +W  +  K+CY +  P+    +       +  + KV+G         PV +L+IT LS  RKDAH S Y            +   S +DC HWCLPGL DTWN+L +A
Sbjct:  175 KMMFVGDSLNRGMYVSLICLLHSQIPENSKSMDTFGSLTVFSLKDYNATIEFYWAPFLLESNSDNATVHRVSDRIVRKGSINKHGRHWRGADIVVFNTYLWWRTGFKMKILEGSFKDEKKRIVEMESEDAYRMALKTMVKWVKKNMDPLKTRVFFATMSPTHYKGEDWGGEQGKNCYNQTTPIQDMNHWPSD--CSKTLMKVIGEELDQRAEFPVTVLNITQLSGYRKDAHTSIYKKQWSPLTKEQLANPASYSDCIHWCLPGLQDTWNELFFA 446          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0P859_GOSAR0.000e+0100.00Enolase OS=Gossypium arboreum GN=F383_25667 PE=4 S... [more]
A0A0D2VHM4_GOSRA1.057e-17997.59Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061GDR4_THECC5.585e-15788.76Trichome birefringence-like 37 isoform 1 OS=Theobr... [more]
A0A0D2UI90_GOSRA1.789e-15484.34Uncharacterized protein OS=Gossypium raimondii GN=... [more]
I1MER4_SOYBN8.639e-14679.12Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2QGL0_GLYSO1.130e-14579.12Uncharacterized protein OS=Glycine soja GN=glysoja... [more]
V7BPZ9_PHAVU2.501e-14477.91Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A0A067JB93_JATCU6.007e-14477.51Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
R0IHR4_9BRAS1.069e-14376.00Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
I3SYA8_LOTJA1.171e-14378.71Uncharacterized protein OS=Lotus japonicus PE=2 SV... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
TBL8_ARATH6.211e-4635.53Protein trichome birefringence-like 8 OS=Arabidops... [more]
TBL3_ARATH6.778e-4631.99Protein trichome birefringence-like 3 OS=Arabidops... [more]
TBL33_ARATH1.729e-4434.55Protein trichome birefringence-like 33 OS=Arabidop... [more]
TBL10_ARATH3.553e-4434.31Protein trichome birefringence-like 10 OS=Arabidop... [more]
TBL32_ARATH1.088e-4334.67Protein trichome birefringence-like 32 OS=Arabidop... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026057PC-EsterasePFAMPF13839PC-Esterasecoord: 1..246
e-value: 5.7E-86
score: 288.6
IPR029986Protein trichome birefringence-like 37/38PANTHERPTHR32285:SF15PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATEDcoord: 1..247
IPR029962Trichome birefringence-like familyPANTHERPTHR32285FAMILY NOT NAMEDcoord: 1..247

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0006523 ID=g.arboreum_cottongen_reftransV1_0006523; Name=g.arboreum_cottongen_reftransV1_0006523; organism=Gossypium arboreum; type=contig; length=751bp
AGAGCTGCATATAGAAGCTGGTTCCATGTATCAGGCAAACCAGGAAGACA
CCAATGGCTACAATCATTACCCGAATGGTCACCACTATAAGTCGAAGGAT
GAGCATCTTTTCTCAACTGTGACAACGTCGTAATATCGAGCAAGTAAACC
GGTTTGTTCATCGACCCCAATACTTTGTTCACAATGGCAGCAGCTGGTGG
AGCCCCTGCTTGGTATGTGGTACCGGATAGTGGCTCTTGTTCTCCATAAC
AACTCTTTTTTGGTTGGTTCCACTCCCTACCCTCGTAGTGGGTAGGGGAA
ATTCCCTGGAAGAAGACCTTGGTCTTGGTTTGATCGACATTGGTGTCGAC
CCAATTAGCCCATGTTGCAAGCCCTTTGTTGTAGGCCTCTAAACGGTTCA
TATCTTTGTATAATGCAGACCCATCTCTAATGTAATCCCATCCTTGGGAT
TTTCCTTTGTGGGTCCACCAATGCCAACTGTTGAAAATCAAGAGGTCCAT
CCCTATCCATGCATTGCCACCTTTGATGGAGCCTAGATTAAGCACATCAC
CAACATTTTCTTTAACTATATCCACTAAATATGGTGTTCGATACAAATAG
AGTGTTACCCCATAATCCTCAAAGATAACAAAAGACAAAGGGGACTTCCT
CACAAATGTGGTCTTGGAGTTGGGCACAGAAGCATGAATCATACAAGCCA
TAGATTCCCACATGTTCAAACTCAGTGAGTCACCTACAAACATTATTTTC
T
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR026057TBL_C
IPR029986TBL37/38
IPR029962TBL