g.arboreum_cottongen_reftransV1_0006523, g.arboreum_cottongen_reftransV1_0006523 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0006523
Unique Name	g.arboreum_cottongen_reftransV1_0006523
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	751

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr9	chromosome	g.arboreum_cottongen_reftransV1_0006523:1..751 . Chr9:62165428..62167137 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0B0P859_GOSAR (Enolase OS=Gossypium arboreum GN=F383_25667 PE=4 SV=1)

HSP 1 Score: 520.39 bits (1339), Expect = 0.000e+0
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = -3

Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  114 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 362

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0D2VHM4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G033800 PE=4 SV=1)

HSP 1 Score: 510.76 bits (1314), Expect = 1.057e-179
Identity = 243/249 (97.59%), Postives = 246/249 (98.80%), Query Frame = -3

Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQ WDYIRDGSALYKDMNRLEAYNKGL TWANWVDTNVD TKTKVFFQGISPTHYEGREWNQPK+SCYGEQEPLSG+TYQAGAPP+AAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  114 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQAWDYIRDGSALYKDMNRLEAYNKGLTTWANWVDTNVDPTKTKVFFQGISPTHYEGREWNQPKRSCYGEQEPLSGSTYQAGAPPSAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 362

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A061GDR4_THECC (Trichome birefringence-like 37 isoform 1 OS=Theobroma cacao GN=TCM_029724 PE=4 SV=1)

HSP 1 Score: 452.981 bits (1164), Expect = 5.585e-157
Identity = 221/249 (88.76%), Postives = 235/249 (94.38%), Query Frame = -3

Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES+ACMIHASVPNSKTT+VRK PLSFVIFEDY VTLYLYRTPYLVDIV+E+VG VLNLGSI GGNAW GMD+L+FNSWHWWTHKGKSQ WDYIRDGS LYKDM+R  A+NKGL TWANWVD+NVD TKTKVFFQGISPTHYEGREWNQPKK+CYGE EPLSG+TY AGAPPAAAI+NKVLG+M KPVYLLDITTLSQLRKDAHPSTYSG+HSGNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  112 KIMFVGDSLSLNMWESLACMIHASVPNSKTTYVRKDPLSFVIFEDYAVTLYLYRTPYLVDIVRESVGAVLNLGSINGGNAWKGMDMLVFNSWHWWTHKGKSQAWDYIRDGSELYKDMDRFVAFNKGLTTWANWVDSNVDPTKTKVFFQGISPTHYEGREWNQPKKNCYGELEPLSGSTYPAGAPPAAAILNKVLGTMKKPVYLLDITTLSQLRKDAHPSTYSGEHSGNDCSHWCLPGLPDTWNQLLYAA 360

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0D2UI90_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G242200 PE=4 SV=1)

HSP 1 Score: 446.817 bits (1148), Expect = 1.789e-154
Identity = 210/249 (84.34%), Postives = 226/249 (90.76%), Query Frame = -3

Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES+ CMIHASVPNSKTT+VR+ PLSFV FE+YGVTLY+YRTPYLVDIV+E VG VL+L SI GG AW GMD+LIFNSWHWWTHKGKSQ WDYIRDGSAL+KDMNRL AY KGL+TWA WVDTNVD TKTKVFFQGISPTHYEGREWNQPK+SC GE +PLSG+ Y  GAPPA+AIVN +L  M KPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPD+WNQLLYAA
Sbjct:  122 KIMFVGDSLSLNMWESLVCMIHASVPNSKTTYVRRDPLSFVNFEEYGVTLYVYRTPYLVDIVREKVGAVLHLNSINGGKAWKGMDVLIFNSWHWWTHKGKSQAWDYIRDGSALHKDMNRLLAYYKGLSTWAKWVDTNVDTTKTKVFFQGISPTHYEGREWNQPKRSCNGELQPLSGSKYPVGAPPASAIVNTILRKMMKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDSWNQLLYAA 370

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: I1MER4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 424.861 bits (1091), Expect = 8.639e-146
Identity = 197/249 (79.12%), Postives = 218/249 (87.55%), Query Frame = -3

Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES++CMIHASVPN+KT F+RK  LS V F+DYGVT+ LYRTPYLVDI++ENVG VL L SI  GNAW GMD+LIFNSWHWWTH GKSQGWDYIRDG  L K+M+RLEAYNKGL TWANWVD NVD +KTKVFFQGISPTHY+G++WNQPK+SC GE +PLSG+TY AG PPA  I+N VL  M+ PVYLLDIT LSQLRKDAHPS YSGDH+GNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  124 KIMFVGDSLSLNMWESLSCMIHASVPNAKTGFLRKESLSTVTFQDYGVTIQLYRTPYLVDIIRENVGRVLTLDSIVAGNAWKGMDMLIFNSWHWWTHTGKSQGWDYIRDGPNLVKNMDRLEAYNKGLTTWANWVDQNVDPSKTKVFFQGISPTHYQGKDWNQPKRSCSGELQPLSGSTYPAGLPPATTILNNVLRKMSTPVYLLDITLLSQLRKDAHPSAYSGDHAGNDCSHWCLPGLPDTWNQLLYAA 372

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A0B2QGL0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_036096 PE=4 SV=1)

HSP 1 Score: 424.091 bits (1089), Expect = 1.130e-145
Identity = 197/249 (79.12%), Postives = 218/249 (87.55%), Query Frame = -3

Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES++CMIHASVPN+KT F+RK  LS V F+DYGVT+ LYRTPYLVDI++ENVG VL L SI  GNAW GMD+LIFNSWHWWTH GKSQGWDYIRDG  L K+M+RLEAYNKGL TWANWVD NVD +KTKVFFQGISPTHY+G++WNQPK+SC GE +PLSG+TY AG PPA  I+N VL  M+ PVYLLDIT LSQLRKDAHPS YSGDH+GNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  113 KIMFVGDSLSLNMWESLSCMIHASVPNAKTGFLRKESLSTVTFQDYGVTIQLYRTPYLVDIIRENVGRVLTLDSIVAGNAWKGMDMLIFNSWHWWTHTGKSQGWDYIRDGPNLVKNMDRLEAYNKGLTTWANWVDQNVDPSKTKVFFQGISPTHYQGKDWNQPKRSCSGELQPLSGSTYPAGLPPATTILNNVLRKMSTPVYLLDITLLSQLRKDAHPSAYSGDHAGNDCSHWCLPGLPDTWNQLLYAA 361

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: V7BPZ9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G177100g PE=4 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 2.501e-144
Identity = 194/249 (77.91%), Postives = 218/249 (87.55%), Query Frame = -3

Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES++CMIHASVPN+K++F+RK  LS V F+DYGVT+ LYRTPYLVDI++E VG VL L SI  GNAW GMDLLIFNSWHWWTH GKSQGWDYIRDG  L K+M+RL+AYNKGL TWANWVD NVD TKTK+FFQGISPTHY+G++WNQP++SC GE +PLSG+TY AG PPA  I+N VL  MN  VYLLDIT LSQLRKDAHPS+YSGDH+GNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  113 KIMFVGDSLSLNMWESLSCMIHASVPNTKSSFLRKESLSTVTFQDYGVTIQLYRTPYLVDIIREKVGRVLTLNSIVAGNAWKGMDLLIFNSWHWWTHTGKSQGWDYIRDGPNLVKNMDRLDAYNKGLTTWANWVDQNVDTTKTKIFFQGISPTHYQGKDWNQPRRSCSGELQPLSGSTYPAGLPPATTILNNVLKKMNTQVYLLDITLLSQLRKDAHPSSYSGDHAGNDCSHWCLPGLPDTWNQLLYAA 361

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: A0A067JB93_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21547 PE=4 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 6.007e-144
Identity = 193/249 (77.51%), Postives = 219/249 (87.95%), Query Frame = -3

Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            +IMFVGDSLSLNMWES++CMIHASVPN+KT+ V +  L  V FEDYGVTL++YRTPYLVDIVKE+ G VL L SI+ G AW GMD+LIFNSWHWWTH GKSQ WDY+RDG ALYKDMNRLEA+ KGL+TWA WVD NVD +KTKVFFQGISPTHYEGR+WNQP+K+CYGE +PLSG+TY  GAPPA A+VN+V+ +M KP+YLLDITTLSQLRKDAHPSTYSG+ SG DCSHWCLPGLPD WNQLLYAA
Sbjct:  116 QIMFVGDSLSLNMWESLSCMIHASVPNAKTSRVNQDSLHSVTFEDYGVTLFMYRTPYLVDIVKESAGRVLLLDSIEAGKAWKGMDMLIFNSWHWWTHTGKSQPWDYMRDGPALYKDMNRLEAFYKGLSTWAKWVDLNVDPSKTKVFFQGISPTHYEGRDWNQPRKNCYGEAQPLSGSTYPGGAPPAVAVVNQVISTMKKPIYLLDITTLSQLRKDAHPSTYSGEGSGTDCSHWCLPGLPDIWNQLLYAA 364

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: R0IHR4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10009422mg PE=4 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 1.069e-143
Identity = 190/250 (76.00%), Postives = 223/250 (89.20%), Query Frame = -3

Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGG-NAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            ++MFVGDSLSLNMWES+ CMIHASVPN+KTTF +++PLS + F+DYGVTLYLYRTPY+VDI KE VG VLNLG+I GG +AW  MD+L+FNSWHWWTHKG+SQGWDYIRDGS+L +DMNRL+A+ KGL+TWA WVD NVD TKT+VFFQGISPTHYEGREWN+P+KSC G+ +PL G++Y +G PP+A +V+KVLGSM KPV+LLDITTLSQLRKDAHPS+Y GD  G DCSHWCLPGLPDTWNQLLYAA
Sbjct:  133 RVMFVGDSLSLNMWESLGCMIHASVPNAKTTFTKRTPLSTLTFQDYGVTLYLYRTPYIVDIAKERVGRVLNLGAIDGGASAWKNMDVLVFNSWHWWTHKGQSQGWDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTTKTRVFFQGISPTHYEGREWNEPRKSCSGQMQPLGGSSYPSGQPPSAGVVSKVLGSMRKPVFLLDITTLSQLRKDAHPSSYGGD-GGTDCSHWCLPGLPDTWNQLLYAA 381

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Match: I3SYA8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 419.083 bits (1076), Expect = 1.171e-143
Identity = 196/249 (78.71%), Postives = 215/249 (86.35%), Query Frame = -3

Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSIKGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGNDCSHWCLPGLPDTWNQLLYAA 749
            KIMFVGDSLSLNMWES+ACMIHASVPN+KT+F+RK  LS V F+DYGVT+ LYRTPYLVDI++ENVG VL L SI  GNAW GMD+LIFNSWHWW H GKSQGWDYIRDG  L K+M+RLEAY KGL TWA WVD NVD +KTKVFFQGISPTHY+G+EWNQPK+SC G+ EPL+G+TY AG P AA I+N VL  MN PVYLLDIT LSQLRKDAHPSTY  DHSGNDCSHWCLPGLPDTWNQLLYAA
Sbjct:  109 KIMFVGDSLSLNMWESLACMIHASVPNAKTSFLRKESLSTVTFQDYGVTIQLYRTPYLVDIIRENVGRVLTLDSIVAGNAWKGMDMLIFNSWHWWIHTGKSQGWDYIRDGPNLVKNMDRLEAYTKGLTTWARWVDLNVDPSKTKVFFQGISPTHYQGKEWNQPKRSCSGQLEPLAGSTYPAGLPQAANILNSVLKKMNNPVYLLDITLLSQLRKDAHPSTYGEDHSGNDCSHWCLPGLPDTWNQLLYAA 357

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL1_ARATH (Protein trichome birefringence-like 1 OS=Arabidopsis thaliana GN=TBL1 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.908e-60
Identity = 106/271 (39.11%), Postives = 157/271 (57.93%), Query Frame = -3

Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSF-------VIFEDYGVTLYLYRTPYLV---DIVKEN--VGDVLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTY-----SGDHSGN-----DCSHWCLPGLPDTWNQLLYA 749
            +++FVGDSL+ NMWES+ C++  SV +    F       F        +F+DY  T+  + +P+LV   ++ ++N    + L L  + K    + G D+L+FN+ HWWTH+  S+G DY ++GS ++  ++  EA+ K L TW  WVD NV+  K+ VFF+G SP+H+ G +WN    +C  E EP+   TY         I+ +VL  M  PV  L+IT L+  RKDAHPS Y     S + S +     DCSHWCLPG+PD+WN++ YA
Sbjct:  264 RLVFVGDSLNRNMWESLVCILKGSVKDESQVFEAHGRHQFRWEAEYSFVFKDYNCTVEFFASPFLVQEWEVTEKNGTKKETLRLDLVGKSSEQYKGADILVFNTGHWWTHEKTSKGEDYYQEGSTVHPKLDVDEAFRKALTTWGRWVDKNVNPKKSLVFFRGYSPSHFSGGQWNA-GGACDDETEPIKNETYLTPYMLKMEILERVLRGMKTPVTYLNITRLTDYRKDAHPSIYRKQKLSAEESKSPLLYQDCSHWCLPGVPDSWNEIFYA 533

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL36_ARATH (Protein trichome birefringence-like 36 OS=Arabidopsis thaliana GN=TBL36 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 7.109e-56
Identity = 98/261 (37.55%), Postives = 147/261 (56.32%), Query Frame = -3

Query:   12 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVK-ENVGDVLNLGSIK-GGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLS--GTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDH-----------SGNDCSHWCLPGLPDTWNQLL 749
            +IM VGDS+  N WES+ C++ + +P  +       P       D+  ++     P LV++ +  +   VL+L SI+     W G+D+L+F+S HWWTH  +   WDY  DG+ ++K M+ + AY +GL TWA WV+ N+D +KTKV F+ +SP     RE  Q    CY ++ PL    ++ +   P  + ++NKVL +M   VYL DITT+S  R+D HPS +                 +DCSHWCLPG+PD WN++L
Sbjct:  118 RIMLVGDSMMRNQWESLVCLVQSVLPTHRKKLTYNGPTMSFHSLDFETSIEFCWAPLLVELKRGVDRKRVLHLDSIEDNARYWRGVDVLVFDSAHWWTHSQRWSSWDYYMDGNKIFKAMDPMVAYERGLTTWAKWVEINLDPSKTKVIFRTVSP-----RESGQ---MCYNQKHPLPSLSSSTKPHVPQQSRVLNKVLRTMKYRVYLYDITTMSAYRRDGHPSVFKRAMHEEEKHHRIAGPSSDCSHWCLPGVPDIWNEML 370

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL2_ARATH (Protein trichome birefringence-like 2 OS=Arabidopsis thaliana GN=TBL2 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.494e-55
Identity = 102/273 (37.36%), Postives = 150/273 (54.95%), Query Frame = -3

Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNSKTTF-------VRKSPLSFVIFEDYGVTLYLYRTPYLVDI-----VKENVGDVLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVL-GSMNKPVYLLDITTLSQLRKDAHPSTYSGDH----------SGNDCSHWCLPGLPDTWNQLLYAA 749
            K++FVGDS++ NMWES+ C++  S+ + K  +        +K       FEDY  T+    +P+ V       V     + L L  + K  + +   D+LIFN+ HWWTH     G +Y ++G+ +Y  +  LEAY + L TWA WVD N+D+++T + F+G S TH+ G  WN   + C+ E EP+  T+Y A  P     +  +L  +M  PV  ++I+ L+  RKD HPS Y   +          S  DCSHWCLPG+PDTWNQLLY +
Sbjct:  260 KLVFVGDSINRNMWESLICILRHSLKDKKRVYEISGRREFKKKGFYAFRFEDYNCTVDFVGSPFFVRESSFKGVNGTTLETLRLDMMDKTTSMYRDADILIFNTGHWWTHDKTKLGENYYQEGNVVYPRLKVLEAYKRALITWAKWVDKNIDRSQTHIVFRGYSVTHFRGGPWNSGGQ-CHKETEPIFNTSYLAKYPSKMKALEYILRDTMKTPVIYMNISRLTDFRKDGHPSIYRMVYRTEKEKREAVSHQDCSHWCLPGVPDTWNQLLYVS 531

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL6_ARATH (Protein trichome birefringence-like 6 OS=Arabidopsis thaliana GN=TBL6 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.280e-54
Identity = 99/266 (37.22%), Postives = 148/266 (55.64%), Query Frame = -3

Query:    9 KIMFVGDSLSLNMWESMACMIHASVPNSKTTF--------VRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVG----DVLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTY------SGDHSGNDCSHWCLPGLPDTWNQLLY 749
            +++FVGDS++ N WESM C++  +V + K  +          K   SF  F DY  T+  Y T +LV   +  +G    + L + ++ +  + W G ++L+FN+ HWW+H     G +Y ++G  ++  ++   A+ K L TW++WVD NVD  KT+VFF+  +P+H+ G EWN     C     PL+  T++       +IV  VL  M  PV LL+++ LSQ R DAHPS Y          +  DCSHWCLPG+PDTWN  LY
Sbjct:  206 RLVFVGDSINRNQWESMLCLLFQAVKDPKRVYETHNRRITKEKGNYSFR-FVDYKCTVEFYVTHFLVREGRARIGKKRRETLRIDAMDRTSSRWKGANILVFNTAHWWSHYKTKSGVNYYQEGDLIHPKLDVSTAFKKALQTWSSWVDKNVDPKKTRVFFRSAAPSHFSGGEWNS-GGHCREANMPLN-QTFKPSYSSKKSIVEDVLKQMRTPVTLLNVSGLSQYRIDAHPSIYGTKPENRRSRAVQDCSHWCLPGVPDTWNHFLY 468

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL4_ARATH (Protein trichome birefringence-like 4 OS=Arabidopsis thaliana GN=TBL4 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.283e-53
Identity = 100/276 (36.23%), Postives = 150/276 (54.35%), Query Frame = -3

Query:    3 KIMFVGDSLSLNMWESMACMIHASVPNS--------KTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDV-------LNLGSIKGGNAWI--GMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYS--GDHSG--------NDCSHWCLPGLPDTWNQLLYAA 749
            +++FVGDSL+ NMWES+ C + +++ +         K + +         F D+  ++   ++P+LV   +  V DV       L L  I+     I    D++IFN+ HWWTH+   +G  Y ++G+ +Y+ +   EAY K + TWA+WVD+N++ TKT+VFF G S +H+    WN   + C GE  P+   TY    P    +V  V+  M  PV+ ++IT ++  R D HPS Y    D  G         DCSHWCLPG+PD+WNQLLYA 
Sbjct:  168 RVVFVGDSLNRNMWESLVCSLRSTLEDKNRVSKIIGKQSNLPNEGFYGFRFNDFECSIDFIKSPFLVQ--ESEVVDVYGKRRETLRLDMIQRSMTKIYKNADIVIFNTGHWWTHQKTYEGKGYYQEGNRVYERLEVKEAYTKAIHTWADWVDSNINSTKTRVFFVGYSSSHFRKGAWNSGGQ-CDGETRPIQNETYTGVYPWMMKVVESVISEMKTPVFYMNITKMTWYRTDGHPSVYRQPADPRGTSPAAGMYQDCSHWCLPGVPDSWNQLLYAT 440

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL5_ARATH (Protein trichome birefringence-like 5 OS=Arabidopsis thaliana GN=TBL5 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.792e-52
Identity = 97/269 (36.06%), Postives = 143/269 (53.16%), Query Frame = -3

Query:    3 IMFVGDSLSLNMWESMACMIHASVPNSKTTF------VRKSPLSFVI-FEDYGVTLYLYRTPYLVDI-----VKENVGDVLNLGSIKGGNA-WIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKKSCYGEQEPLSGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSG--------NDCSHWCLPGLPDTWNQLLYAA 746
            +M VGDS++ N +ESM C++   + +    +      + K    FV  FEDY  T+   R+ +LV        + N    L++  I   +A W   D+L+FN+ HWW H   ++G +Y ++G  +Y   +  EAY + L TWA W+D NV+  K  VF++G S  H+ G EW+    SC GE EP+   +     P    IV + +  M  PV LL++T L+  RKD HPS Y   ++          DCSHWCLPG+PD WN L+YA+
Sbjct:  211 LMLVGDSMNRNQFESMLCVLREGLSDKSRMYEVHGHNITKGRGYFVFKFEDYNCTVEFVRSHFLVREGVRANAQGNTNPTLSIDRIDKSHAKWKRADILVFNTGHWWVHGKTARGKNYYKEGDYIYPKFDATEAYRRSLKTWAKWIDQNVNPKKQLVFYRGYSSAHFRGGEWDS-GGSCNGEVEPVKKGSIIDSYPLKMKIVQEAIKEMQVPVILLNVTKLTNFRKDGHPSIYGKTNTDGKKVSTRRQDCSHWCLPGVPDVWNHLIYAS 478

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL29_ARATH (Protein ESKIMO 1 OS=Arabidopsis thaliana GN=ESK1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.916e-48
Identity = 100/282 (35.46%), Postives = 142/282 (50.35%), Query Frame = -3

Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGDVLNLGSI-----------KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRD-GSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKK-SCYGEQEPL--------SGTTYQAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAH-------------PSTYSGDHSGNDCSHWCLPGLPDTWNQLLYA 749
            ++MFVGDSL+ N WESM C++ + VP  + +  +   LS    EDY  T+  Y  P+LV    E+  D  N+ SI           K G  W G+D L+FN++ WW +    +      D G   Y+++ R  AY + + TW +WV+ N+D  +T VFF  +SP H +  +W  P    C  E  P+         GT Y+       ++   V  S+N PVY L+IT LS+ RKDAH             P   +  ++  DC HWCLPGLPDTWN+ LY 
Sbjct:  209 RMMFVGDSLNRNQWESMVCLVQSVVPPGRKSLNKTGSLSVFRVEDYNATVEFYWAPFLV----ESNSDDPNMHSILNRIIMPESIEKHGVNWKGVDFLVFNTYIWWMNTFAMKVLRGSFDKGDTEYEEIERPVAYRRVMRTWGDWVERNIDPLRTTVFFASMSPLHIKSLDWENPDGIKCALETTPILNMSMPFSVGTDYR-----LFSVAENVTHSLNVPVYFLNITKLSEYRKDAHTSVHTIRQGKMLTPEQQADPNTYADCIHWCLPGLPDTWNEFLYT 481

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL31_ARATH (Protein trichome birefringence-like 31 OS=Arabidopsis thaliana GN=TBL31 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.635e-47
Identity = 92/272 (33.82%), Postives = 141/272 (51.84%), Query Frame = -3

Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLVDIVKENVGD------VLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQ-PKKSCYGEQEPLSGTTY--QAGAPPAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSGN--------------DCSHWCLPGLPDTWNQLLYA 749
            ++MF+GDS+  + +ESM CM+ + +P  K +F R  P+     E+Y  ++  Y  P++V+ + ++  +      ++ L +I K   +W G+D+L+F S+ WW H+ K          ++  ++ N   AY   L TWA W  T ++  K KVFF  +SPTH    EWN     +CY E  P+   +Y           IV  VL  + + V  L+IT LS+ RKD H + Y G+  G               DC HWCLPG+PDTWN++LYA
Sbjct:  136 RLMFIGDSVQRSTFESMVCMVQSVIPEKKKSFHRIPPMKIFKAEEYNASIEYYWAPFIVESISDHATNHTVHKRLVKLDAIEKHSKSWEGVDVLVFESYVWWMHQPKINA---TYGDTSEVREYNVTTAYKMALETWAKWFKTKINSEKQKVFFTSMSPTHLWSWEWNPGSDGTCYDELYPIDKRSYWGTGSNQEIMKIVGDVLSRVGENVTFLNITQLSEYRKDGHTTVY-GERRGKLLTKEQRADPKNYGDCIHWCLPGVPDTWNEILYA 403

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL28_ARATH (Protein trichome birefringence-like 28 OS=Arabidopsis thaliana GN=TBL28 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.408e-47
Identity = 98/282 (34.75%), Postives = 142/282 (50.35%), Query Frame = -3

Query:    6 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLV-----DIVKENVGD-VLNLGSI-KGGNAWIGMDLLIFNSWHWWTH----KGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQPKK-SCYGEQEPLSGTTYQAGAPPAAA---------IVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTYSGDHSG-------------NDCSHWCLPGLPDTWNQLLYA 749
            ++MFVGDSL+ N WESM C++ + +P  + +  +   L+    +DY  T+  Y  P+LV     D  K ++ D ++   SI K G  WIG+D L+FNS+ WW +    K     +D   DG   Y ++ R  AY + L T  +WVD N+D   T VFF  +SP H +  +W  P+   C  E  P+   ++       +A         +   V  S+  P++ L+IT LS+ RKDAH S Y+                   DC HWCLPGLPDTWN+ LY 
Sbjct:  140 RLMFVGDSLNRNQWESMVCLVQSVIPPGRKSLNQTGSLTVFKIQDYNATVEFYWAPFLVESNSDDPEKHSIIDRIIMPESIEKHGVNWIGVDFLVFNSYIWWMNTVSIKVLRGSFD---DGDTEYDEIKRPIAYERVLRTLGDWVDHNIDPLSTTVFFMSMSPLHIKSSDWANPEGIRCALETTPILNMSFNVAYGQFSAVGTDYRLFPVAENVTQSLKVPIHFLNITALSEYRKDAHTSVYTIKQGKLLTREQQNDPANFADCIHWCLPGLPDTWNEFLYT 418

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Match: TBL35_ARATH (Protein trichome birefringence-like 35 OS=Arabidopsis thaliana GN=TBL35 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.960e-46
Identity = 92/269 (34.20%), Postives = 138/269 (51.30%), Query Frame = -3

Query:    9 KIMFVGDSLSLNMWESMACMIHASVPNSKTTFVRKSPLSFVIFEDYGVTLYLYRTPYLV-----DIVKENVGD-VLNLGSI-KGGNAWIGMDLLIFNSWHWWTHKGKSQGWDYIRDGSALYKDMNRLEAYNKGLATWANWVDTNVDQTKTKVFFQGISPTHYEGREWNQ-PKKSCYGEQEPLSGTTYQAGAP--PAAAIVNKVLGSMNKPVYLLDITTLSQLRKDAHPSTY------------SGDHSGNDCSHWCLPGLPDTWNQLLY 749
            ++MFVGDSL+   W SM C++ + +P  K +    + L+    EDY  T+     P LV     D V   + + ++   S+ K  + W   D+LIFN++ WW        W     GS   +++   E     + +W +WV  NVD  K +VFF  +SPTH   REWN   + +CYGE++P+   +Y       P   +V +VL  +   V +++IT LS+ RKD HPS Y                S +DC+HWC+PG+PD WNQLL+
Sbjct:  180 RLMFVGDSLNRGQWISMVCLLQSVIPRDKQSMSPNAHLTIFRAEDYNATVEFLWAPLLVESNSDDPVNHRLSERIIRPDSVLKHASKWQHADILIFNTYLWWRQDSVKLRWSSEEKGSC--EEVKSAEGMEMAMDSWGDWVANNVDPNKKRVFFVTMSPTHQWSREWNPGSEGNCYGEKKPIEEESYWGSGSDIPTMRMVKRVLERLGPKVSVINITQLSEYRKDGHPSVYRKFWEPLNEDRLKNPASYSDCTHWCVPGVPDVWNQLLF 446

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0B0P859_GOSAR	0.000e+0	100.00	Enolase OS=Gossypium arboreum GN=F383_25667 PE=4 S...	[more]
A0A0D2VHM4_GOSRA	1.057e-179	97.59	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061GDR4_THECC	5.585e-157	88.76	Trichome birefringence-like 37 isoform 1 OS=Theobr...	[more]
A0A0D2UI90_GOSRA	1.789e-154	84.34	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
I1MER4_SOYBN	8.639e-146	79.12	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
A0A0B2QGL0_GLYSO	1.130e-145	79.12	Uncharacterized protein OS=Glycine soja GN=glysoja...	[more]
V7BPZ9_PHAVU	2.501e-144	77.91	Uncharacterized protein OS=Phaseolus vulgaris GN=P...	[more]
A0A067JB93_JATCU	6.007e-144	77.51	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
R0IHR4_9BRAS	1.069e-143	76.00	Uncharacterized protein OS=Capsella rubella GN=CAR...	[more]
I3SYA8_LOTJA	1.171e-143	78.71	Uncharacterized protein OS=Lotus japonicus PE=2 SV...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0006523 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
TBL1_ARATH	1.908e-60	39.11	Protein trichome birefringence-like 1 OS=Arabidops...	[more]
TBL36_ARATH	7.109e-56	37.55	Protein trichome birefringence-like 36 OS=Arabidop...	[more]
TBL2_ARATH	5.494e-55	37.36	Protein trichome birefringence-like 2 OS=Arabidops...	[more]
TBL6_ARATH	6.280e-54	37.22	Protein trichome birefringence-like 6 OS=Arabidops...	[more]
TBL4_ARATH	5.283e-53	36.23	Protein trichome birefringence-like 4 OS=Arabidops...	[more]
TBL5_ARATH	1.792e-52	36.06	Protein trichome birefringence-like 5 OS=Arabidops...	[more]
TBL29_ARATH	3.916e-48	35.46	Protein ESKIMO 1 OS=Arabidopsis thaliana GN=ESK1 P...	[more]
TBL31_ARATH	1.635e-47	33.82	Protein trichome birefringence-like 31 OS=Arabidop...	[more]
TBL28_ARATH	6.408e-47	34.75	Protein trichome birefringence-like 28 OS=Arabidop...	[more]
TBL35_ARATH	2.960e-46	34.20	Protein trichome birefringence-like 35 OS=Arabidop...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026057	PC-Esterase	PFAM	PF13839	PC-Esterase	coord: 1..246 e-value: 5.7E-86 score: 288.6
IPR029986	Protein trichome birefringence-like 37/38	PANTHER	PTHR32285:SF15	PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED	coord: 1..247
IPR029962	Trichome birefringence-like family	PANTHER	PTHR32285	FAMILY NOT NAMED	coord: 1..247

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0006523 ID=g.arboreum_cottongen_reftransV1_0006523; Name=g.arboreum_cottongen_reftransV1_0006523; organism=Gossypium arboreum; type=contig; length=751bp
AGAGCTGCATATAGAAGCTGGTTCCATGTATCAGGCAAACCAGGAAGACA
CCAATGGCTACAATCATTACCCGAATGGTCACCACTATAAGTCGAAGGAT
GAGCATCTTTTCTCAACTGTGACAACGTCGTAATATCGAGCAAGTAAACC
GGTTTGTTCATCGACCCCAATACTTTGTTCACAATGGCAGCAGCTGGTGG
AGCCCCTGCTTGGTATGTGGTACCGGATAGTGGCTCTTGTTCTCCATAAC
AACTCTTTTTTGGTTGGTTCCACTCCCTACCCTCGTAGTGGGTAGGGGAA
ATTCCCTGGAAGAAGACCTTGGTCTTGGTTTGATCGACATTGGTGTCGAC
CCAATTAGCCCATGTTGCAAGCCCTTTGTTGTAGGCCTCTAAACGGTTCA
TATCTTTGTATAATGCAGACCCATCTCTAATGTAATCCCATCCTTGGGAT
TTTCCTTTGTGGGTCCACCAATGCCAACTGTTGAAAATCAAGAGGTCCAT
CCCTATCCATGCATTGCCACCTTTGATGGAGCCTAGATTAAGCACATCAC
CAACATTTTCTTTAACTATATCCACTAAATATGGTGTTCGATACAAATAG
AGTGTTACCCCATAATCCTCAAAGATAACAAAAGACAAAGGGGACTTCCT
CACAAATGTGGTCTTGGAGTTGGGCACAGAAGCATGAATCATACAAGCCA
TAGATTCCCACATGTTCAAACTCAGTGAGTCACCTACAAACATTATTTTC
T

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR026057	TBL_C
IPR029986	TBL37/38
IPR029962	TBL

Search form

g.arboreum_cottongen_reftransV1_0006523, g.arboreum_cottongen_reftransV1_0006523 (contig) Gossypium arboreum

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