g.arboreum_cottongen_reftransV1_0009519, g.arboreum_cottongen_reftransV1_0009519 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: V7AKM5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G113300g PE=4 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.471e-48 Identity = 85/110 (77.27%), Postives = 96/110 (87.27%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MG C+STSS+ T S + VSP C +IGFCGQKRT+RTFSDHVI+LHHLPS+P+R+F+NGKSR SCIFTQQGRKGINQDAMIVWEDFM ED+ FCGVFDGHGPHGHLV Sbjct: 1 MGCCVSTSSKSTCSSKSNGDTVSPACLEIGFCGQKRTRRTFSDHVISLHHLPSLPSRIFSNGKSRGSCIFTQQGRKGINQDAMIVWEDFMSEDMIFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: I1LRZ4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 7.451e-48 Identity = 87/110 (79.09%), Postives = 95/110 (86.36%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MG C+STSSR T S + VSP+C + G CGQKRT+RTFSDHVI+LHHLPS+PNR+FTNGKSRSSCIFTQQGRKGINQDAMIVWEDFM ED FCGVFDGHGPHGHLV Sbjct: 1 MGCCVSTSSRSTCSSKSNGDMVSPSCLETGCCGQKRTRRTFSDHVISLHHLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDTIFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: A0A0B2RI05_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_025783 PE=4 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.686e-48 Identity = 87/110 (79.09%), Postives = 95/110 (86.36%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MG C+STSSR T S + VSP+C + G CGQKRT+RTFSDHVI+LHHLPS+PNR+FTNGKSRSSCIFTQQGRKGINQDAMIVWEDFM ED FCGVFDGHGPHGHLV Sbjct: 1 MGCCVSTSSRSTCSSKSNGDMVSPSCLETGCCGQKRTRRTFSDHVISLHHLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDTIFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: I1KF45_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 9.466e-48 Identity = 86/110 (78.18%), Postives = 95/110 (86.36%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MG CISTSSR T S + VSP+C +IG CGQKRT+RTFSDHVI+LHHLPS+P+R+F+NGKSR SCIFTQQGRKGINQDAMIVWEDFM ED FCGVFDGHGPHGHLV Sbjct: 1 MGSCISTSSRSTCSSKSNGDMVSPSCLEIGCCGQKRTRRTFSDHVISLHHLPSLPSRIFSNGKSRGSCIFTQQGRKGINQDAMIVWEDFMSEDTIFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: A0A0D2RIP5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G204100 PE=4 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.039e-47 Identity = 79/91 (86.81%), Postives = 83/91 (91.21%), Query Frame = -2 Query: 3 EEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 275 E VSP C +IGFCG KRTKRTFSDHVI L +LPSVPNR+FTNGKSR+SCIFTQQGRKGINQDAMIVWEDFM EDVTFCGVFDGHGP GHLV Sbjct: 20 EAVSPLCFEIGFCGTKRTKRTFSDHVITLQNLPSVPNRIFTNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPQGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: A0A0B2P4V3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_037951 PE=4 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.398e-47 Identity = 84/110 (76.36%), Postives = 95/110 (86.36%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MG C+STSS+ T S + ++PTC +IGFCGQK +RT SDHV++LH PS+PNR+FTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV Sbjct: 1 MGCCVSTSSQSTCSSRSNGDTIAPTCLEIGFCGQKSARRTSSDHVVSLHQFPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: A0A067JJU0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25824 PE=4 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.403e-47 Identity = 85/110 (77.27%), Postives = 94/110 (85.45%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MG C+STSSR T S + V P C IGFCGQK+TKRTFSDHV++L HLPS+PNR+FTNGKSR+SCIFTQQGRKGINQDAMIVWEDF+ EDV FCGVFDGHGPHGHLV Sbjct: 1 MGACVSTSSRSTCSSKSNGDTVPPPCLGIGFCGQKKTKRTFSDHVVSLQHLPSIPNRIFTNGKSRTSCIFTQQGRKGINQDAMIVWEDFLSEDVIFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: A0A0B0NGL3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_16619 PE=4 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.977e-47 Identity = 89/110 (80.91%), Postives = 95/110 (86.36%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MG C+STSSR T S R E VSP C +IGFCG +RTKRTFSDHVI L +LPSVPNR+FTNGKSR+SCIFTQQGRKGINQDAMIVWEDFM EDVTFCGVFDGHGP GHLV Sbjct: 1 MGCCVSTSSRSTCSSGSRGEAVSPLCFEIGFCGTQRTKRTFSDHVITLQNLPSVPNRIFTNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPQGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: I1KF44_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.058e-47 Identity = 86/110 (78.18%), Postives = 95/110 (86.36%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MG CISTSSR T S + VSP+C +IG CGQKRT+RTFSDHVI+LHHLPS+P+R+F+NGKSR SCIFTQQGRKGINQDAMIVWEDFM ED FCGVFDGHGPHGHLV Sbjct: 1 MGSCISTSSRSTCSSKSNGDMVSPSCLEIGCCGQKRTRRTFSDHVISLHHLPSLPSRIFSNGKSRGSCIFTQQGRKGINQDAMIVWEDFMSEDTIFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: B9I674_POPTR (Phosphatase 2C family protein OS=Populus trichocarpa GN=POPTR_0013s14030g PE=4 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 3.022e-47 Identity = 85/110 (77.27%), Postives = 90/110 (81.82%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MG C+STS S E V P C IGFCGQKRTKRTFSDH++ L HLPS+ NRVFTNGKSR+SCIFTQQGRKGINQDAMIVWEDFM EDVTFCGVFDGHGPHGHLV Sbjct: 1 MGACVSTSRSTCSSKSNG-EPVPPPCLGIGFCGQKRTKRTFSDHLVTLQHLPSISNRVFTNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLV 109
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C01_ARATH (Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.801e-39 Identity = 73/110 (66.36%), Postives = 83/110 (75.45%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MGGCIS +S E + C +G CG K KR FSD +++LH+L S+PNR+ NGKSRSSCIFTQQGRKGINQDAMIVWEDFM +DVTFCGVFDGHGPHGHLV Sbjct: 1 MGGCISKTSWSNE------EPMHRPCLGMGCCGSKMGKRGFSDRMVSLHNLVSIPNRIIGNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSKDVTFCGVFDGHGPHGHLV 104
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C52_ARATH (Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana GN=At4g03415 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.675e-35 Identity = 76/111 (68.47%), Postives = 88/111 (79.28%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREE-VSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MGGC+STSS+ T S E+ V IG C KR KRTFSDH+++L +L S+PNR+ ++ KSRSSCIFTQQGRKGINQDAMIVWEDFM EDVTFCGVFDGHGP+GHLV Sbjct: 1 MGGCVSTSSKSTCSSWSNGEKPVRRPYLGIGCCVSKRAKRTFSDHIVSLQNLTSIPNRITSSSKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPYGHLV 111
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C64_ORYSJ (Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.921e-18 Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = -2 Query: 3 HLPSVPNRVFTN-GKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDV-TFCGVFDGHGPHGHLV 185 L VP R+F+N G+SR++ ++TQQGRKGINQDAM+VW+ F ED CGVFDGHGPHGH+V Sbjct: 36 QLGMVPGRIFSNDGRSRTATVYTQQGRKGINQDAMLVWDGFGGEDDGVLCGVFDGHGPHGHVV 98
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C33_ARATH (Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.025e-18 Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = -2 Query: 3 LPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPE-DVTFCGVFDGHGPHGHLV 182 L VP R+F NG + +CI+TQQG+KG NQDAM+VWE+F D FCGVFDGHGP+GH+V Sbjct: 49 LNQVPGRMFLNGSTEVACIYTQQGKKGPNQDAMVVWENFGSRTDTIFCGVFDGHGPYGHMV 109
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C66_ORYSJ (Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.350e-18 Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = -2 Query: 3 HHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 188 L V RV NG S ++C+ TQQGRKG NQDAM+VWE+F D FCGVFDGHGP+GH V Sbjct: 71 EELAKVEGRVCVNGASAAACLHTQQGRKGTNQDAMVVWENFNTSDSVFCGVFDGHGPYGHFV 132
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C74_ARATH (Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.980e-17 Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = -2 Query: 3 LPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDF-MPEDVTFCGVFDGHGPHGHLV 182 L +P R+F NG + + +F+QQG+KG NQDAMIVWE+F ED FCGVFDGHGP+GH+V Sbjct: 52 LHRIPGRMFLNGSTDTVSLFSQQGKKGPNQDAMIVWENFGSMEDTVFCGVFDGHGPYGHIV 112
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C14_ORYSJ (Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 9.587e-17 Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = -2 Query: 3 SDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDF-MPEDVTFCGVFDGHGPHGHLV 209 +D A L +P R+ NG + ++T QG+KG+NQDAMIVWE+F ED FCGVFDGHGP+GHLV Sbjct: 105 ADGRRAAAELRGIPGRIAGNGACAVASLYTLQGKKGVNQDAMIVWENFCSREDTIFCGVFDGHGPNGHLV 174
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C18_ARATH (Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.489e-16 Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = -2 Query: 3 LHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDF-MPEDVTFCGVFDGHGPHGHLV 191 + +P V R+ +NG S+ +C++TQQG+KG NQDAM+V+E+F +D FCGVFDGHGP GH+V Sbjct: 49 IEGIPQVLGRLVSNGSSKIACLYTQQGKKGTNQDAMLVFENFCSRDDTVFCGVFDGHGPFGHMV 112
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C75_ORYSJ (Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.842e-16 Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = -2 Query: 3 VPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFM-PEDVTFCGVFDGHGPHGHLV 173 P R+ NG +C+FT+QG+KG NQDAM+ WE++ D FCGVFDGHGPHGHL+ Sbjct: 32 APGRIAGNGAGNVACLFTRQGKKGTNQDAMVAWENYNGRSDTVFCGVFDGHGPHGHLI 89
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C06_ARATH (Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.492e-15 Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = -2 Query: 3 LHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPE-DVTFCGVFDGHGPHGHLV 191 + + V R+ NG S +C++TQQG+KG NQDAM+VWE+F D CGVFDGHGP GH+V Sbjct: 46 ISEIQQVVGRLVGNGSSEIACLYTQQGKKGTNQDAMLVWENFCSRSDTVLCGVFDGHGPFGHMV 109 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to top
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 16
Pagesback to topSequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0009519 ID=g.arboreum_cottongen_reftransV1_0009519; Name=g.arboreum_cottongen_reftransV1_0009519; organism=Gossypium arboreum; type=contig; length=648bpback to top |