g.arboreum_cottongen_reftransV1_0000197, g.arboreum_cottongen_reftransV1_0000197 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A068URB3_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_47 OS=Coffea canephora GN=GSCOC_T00031650001 PE=4 SV=1) HSP 1 Score: 945.266 bits (2442), Expect = 0.000e+0 Identity = 454/678 (66.96%), Postives = 546/678 (80.53%), Query Frame = 3 Query: 483 LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEG--------KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADG-GQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 L+WEV + E E+WI EN DVDL QN ++ ET + ++LIIPLLRYQKEWLAWALKQE+S T+GGILADEMGMGKT QAIALV+AK+++ I EP++ + SS+ P ++ TLVICP+VAV QWVSEIDRFT++GS KVLVYHG+NRG+N+ QFSEYDFVITTYSIVEAEYR+ +MPPK KC +CGK ++ K+SVHLKY+CGPDAIKT QSKQ+RKK S + K++ E D+ + + K+ + + +P KS+LHSVKWERIILDEAH++KDRR +T +AV +L+SLYKWALSGTPLQNRVGELYSLVRFL+IVPYSYY CKDCDC++LDYS+ST CP CPH SVRHFCWWN++VA+PI++ GN G++AM+LLKH+ILK+IVLRRTKKGRAADLALPPRI++LRRD +DIKE DYY SLY+ESQAQFNTY++A T+MNNYAHIFDLLTRLRQAVDHPYLVVYSSTAA R G+I N +VCG+C++ AED VVT+C HVFCK+CLIDFSAS+G +SCPSC++LLTVD T N + Q KTT+KGFK SSI+NRI+L+DFQTSTKI+ALREEIRFMVERDGSAKGIVFSQFTSFLDLI YSL KS + CVQL GSMS+ ARDAAIK FTEDPDC+ Sbjct: 142 LVWEVLQHEIERWIKENEANDVDLSNQNEILAETVEPPANLIIPLLRYQKEWLAWALKQEESTTRGGILADEMGMGKTAQAIALVVAKQEIQKAISEPSLVASAPSSSSTFPAVKGTLVICPLVAVVQWVSEIDRFTTKGSNKVLVYHGSNRGRNIDQFSEYDFVITTYSIVEAEYRRNVMPPKHKCQWCGKLLYEHKMSVHLKYFCGPDAIKTAKQSKQQRKKSNSKTTTSKQNLEFDEDDAFDSNGDMQKRGRKKGAKTSNGIGGSGNAFAYGIPADIGESSSTKKSILHSVKWERIILDEAHYIKDRRSSTTRAVFALQSLYKWALSGTPLQNRVGELYSLVRFLEIVPYSYYYCKDCDCRSLDYSTSTDCPHCPHKSVRHFCWWNRHVASPIKYAGNLGEGRKAMLLLKHRILKSIVLRRTKKGRAADLALPPRIVTLRRDELDIKEEDYYTSLYNESQAQFNTYIEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAGRGGSIRNAPSG---EVCGLCHENAEDAVVTSCTHVFCKSCLIDFSASMGQISCPSCAKLLTVDFTGNKENEDQMPKTTIKGFKPSSIINRIRLDDFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQKSGVSCVQLDGSMSMTARDAAIKRFTEDPDCR 816
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: K4C0N1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc05g044480.2 PE=4 SV=1) HSP 1 Score: 943.725 bits (2438), Expect = 0.000e+0 Identity = 479/799 (59.95%), Postives = 593/799 (74.22%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNE--EHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFT---EPPTNRGNGEQ----ILSE---QNESQFDFNVSXXXXXXXXXXXXXXRSGQP-LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 M+LRSR +S+ + ++ DSSD+ D + + SD Y+ SSD D+ +E +++L + V + + E + G E+ +++E E + + + K + K + +P L+WE+WE+E++ W+ EN D + Q+ ++TET+ SDLI+PLLRYQKEWL WALKQE+S +GGILADEMGMGKT+QAIALVLAKR++ I ++ S +S LP ++ +LVICPVVAV QWVSEIDRFT++GS K+LVYHG NR KN+ +F+EYDFVITTYS VEAEYRK +MPPKEKC +CGKSF+++KLSVH KY+CGPDA+KT QSKQ+ K K K H + + K K + D D AG+ ++ KS+LHSVKW RIILDEAH+VKDRR NT +A+L+LES YKWALSGTPLQNRVGELYSLVRFLQIVPYSYY CKDCDC+ LDYSSS +CP CPH S+RHFCWWN+Y+A+PIQ+ GN G+ AM+LLKHKILK+I+LRRTKKGRAADLALPPRI++LR+D++D+KE DYY SLY+ESQAQFNTY+QAGT+MNNYAHIFDLLTRLRQAVDHPYLVVYSSTA R G+ D EQ+CG+C+DP EDPVVT+C H+FCK+CLIDFSAS+G VSCPSCS LTVD T N G Q SK T+KGF+SSSILNRI L++FQTSTKIEALREEIRFM+E DGSAK IVFSQFTSFLDLI YSL KS + CVQL GSMS+ ARD+AI FTEDPDC+ Sbjct: 1 MKLRSRPSSSSAKGKQRRQYQDSSDE-DYLLSMSSDSD---YIGSSDEDVADE-VVNLTEEVVYSNRRKRNRGKKKIETKEDHGEEEENVDWVMNEVGGGGEVDAGYLQLIGRIEDRKKIRVKNQKKRPTLLWEIWEEENDSWMAENYPNDPHFNSQDELVTETAQPPSDLIMPLLRYQKEWLTWALKQEESTARGGILADEMGMGKTVQAIALVLAKREIGQAISGSSLLSPAPCTSQQLPVMKGSLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGTNRVKNIDKFAEYDFVITTYSTVEAEYRKNVMPPKEKCQWCGKSFYEQKLSVHQKYFCGPDAVKTAKQSKQQSKPGGKPSKLKKDHIEGDSKINTGKRGSGKGIKRKSEADAGCVDDLAFAGQ--DMSTRKSILHSVKWNRIILDEAHYVKDRRSNTTRAILALESSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRVLDYSSS-ECPHCPHKSIRHFCWWNRYIASPIQNQGNRGTGRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARRGS--TNDAGSVEQLCGLCHDPVEDPVVTSCTHIFCKSCLIDFSASVGQVSCPSCSEPLTVDFTANDKGDQKSKATIKGFRSSSILNRIHLDNFQTSTKIEALREEIRFMIEIDGSAKAIVFSQFTSFLDLIHYSLQKSGVSCVQLDGSMSMTARDSAITRFTEDPDCR 789
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: V7BY35_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G115700g PE=4 SV=1) HSP 1 Score: 926.391 bits (2393), Expect = 0.000e+0 Identity = 458/670 (68.36%), Postives = 536/670 (80.00%), Query Frame = 3 Query: 483 LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLID-FSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 L+W WE+E EKWID+++ DVDLD Q+ V+ ET++A SDL +PLLRYQ+EWLAWALKQE S ++GGILADEMGMGKTIQAIALVLAKR+ I EP+ Q+ S+ L I+ TLVICPVVAV+QWVSEIDRFT +GSTKVLVYHGANRG++ +F++YDFVITTYS+VE EYRK MMPPKE+CPYCGK F KL H Y+CGPDA++TE QSKQ +KK + K+ S + K + ED D + KS LH+VKW+RIILDEAH++K R CNTAKAVL+L+S YKWALSGTPLQNRVGELYSL+RFLQI PYSYYLCKDCDC+ LD+SS +C C H+SVRHFCWWNKYVATPIQ +GNG+ GKRAMILLKHK+LKNIVLRRTK GRAADLALPPRI+SLR+D +DIKE DYYESLY+ESQAQFNTY++A T+M+NYAHIFDLLTRLRQAVDHPYLVVYS +++ R+ + N + EQ+CGIC++P ED VVT+C H FC+ACLID +S SLG VSCP+CS+LLTVDLT N D G +KTT+KGF+SSSILNRI L +FQTSTK EALREEIRFMVERDGSAKGIVFSQFTSFLDLI YSLHKS + CVQL GSMSL ARDAAI+ FTEDPDCK Sbjct: 176 LLWNAWEEEQEKWIDQHILEDVDLDNQSEVMNETAEAPSDLTMPLLRYQREWLAWALKQEHSLSRGGILADEMGMGKTIQAIALVLAKRE-FQDICEPD---QSIPCSSSLSAIKGTLVICPVVAVTQWVSEIDRFTLKGSTKVLVYHGANRGRSGDRFADYDFVITTYSVVENEYRKHMMPPKERCPYCGKLFLPSKLMYHQNYFCGPDAVRTEKQSKQAKKKREVTKGKTKECDSRKILKGSIKEKGDKMGIDMEDSDAVP------------VRSDKSFLHAVKWQRIILDEAHYIKSRHCNTAKAVLALDSTYKWALSGTPLQNRVGELYSLIRFLQITPYSYYLCKDCDCRILDHSSK-ECSVCTHSSVRHFCWWNKYVATPIQSFGNGDSGKRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRKDCLDIKEQDYYESLYNESQAQFNTYIEANTLMHNYAHIFDLLTRLRQAVDHPYLVVYSQSSSSRSAVMAN-NATTVEQICGICHEPIEDLVVTSCEHSFCRACLIDYYSTSLGQVSCPACSKLLTVDLTPNKDVGDQAKTTIKGFRSSSILNRIHLENFQTSTKTEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVSCVQLNGSMSLTARDAAIRRFTEDPDCK 827
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: G7JEP7_MEDTR (RING/U-box helicase OS=Medicago truncatula GN=MTR_4g049500 PE=4 SV=1) HSP 1 Score: 926.391 bits (2393), Expect = 0.000e+0 Identity = 467/673 (69.39%), Postives = 527/673 (78.31%), Query Frame = 3 Query: 483 LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEG--KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQR-AGNIV-NGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 L+W W+QEHEKWID+NL DV LDQ + V+ ET++ASSDLI+PLLRYQ+EWLAWALKQE+S T+GGILADEMGMGKTIQAIALVL+KR++ EP S + GSS LP I+ TLVICPVVAV+QWVSEI RFT +GSTKVLVYHG R K+ +FSEYDFVITTYS VE+EYRK +MPPKEKC YCG+ FH L H KYYCGPDAI+T Q+KQ +KK + + KE +L EG KS LH+VKW+RIILDEAHF+K R NTAKAVL+LES YKWALSGTPLQNRVGELYSLVRFLQIVPYSY LCKDCDC+TLD+SSS C C H+SVRHFCWWNK +ATPIQ G G+ GKRAMILLK+K+LK+IVLRRTK GRAADLALPPRI+SLRRD++DIKE DYYESLY+ESQAQFNTYV+ T+ NNYAHIFDLLTRLRQAVDHPYLVVYS TAA R GN+ NGD EQ CGIC+D EDPVVT+C H FCK CLIDFSASLG +SCPSCS+LLTVDLT+N D TT+KGF+SSSILNRIQ+ +FQTSTKIEALREEIRFMVERDGSAK IVFSQFTSFLDLI YSL KS + CVQLVGSM+L ARD AIK FT+DPDCK Sbjct: 196 LLWHAWKQEHEKWIDQNLLEDVTLDQ-SEVMNETAEASSDLIVPLLRYQREWLAWALKQEESVTRGGILADEMGMGKTIQAIALVLSKRELQQMCCEPFEHSDSPGSSKVLPVIKGTLVICPVVAVTQWVSEIARFTLKGSTKVLVYHGPKRWKSADKFSEYDFVITTYSTVESEYRKHVMPPKEKCQYCGRLFHPPSLVFHQKYYCGPDAIRTTKQAKQTKKKKRGQSSKLDGELEQ----------------------------GSIKKKEEDL-EGNDKSFLHAVKWQRIILDEAHFIKSRHSNTAKAVLALESFYKWALSGTPLQNRVGELYSLVRFLQIVPYSYNLCKDCDCRTLDHSSSKVCSNCSHSSVRHFCWWNKNIATPIQSSGYGDDGKRAMILLKNKLLKSIVLRRTKIGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQAQFNTYVEENTLTNNYAHIFDLLTRLRQAVDHPYLVVYSPTAAARQGGNLASNGDV---EQECGICHDTVEDPVVTSCEHTFCKGCLIDFSASLGQISCPSCSKLLTVDLTSNKDAVVDKTTTIKGFRSSSILNRIQIENFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYSLQKSGVSCVQLVGSMTLTARDNAIKKFTDDPDCK 835
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: K4D0D1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc10g049740.1 PE=4 SV=1) HSP 1 Score: 920.613 bits (2378), Expect = 0.000e+0 Identity = 444/669 (66.37%), Postives = 526/669 (78.62%), Query Frame = 3 Query: 483 LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 L+WE+WE+E++ W+ EN D DL+ Q+ ++TET+ SD I+PLLRYQKEWLAWALKQE+SN +GGILADEMGMGKT QAIALVLA+R++ I + ++ S SS +L ++ TLVICPVVAV QWVSEIDRFT++GS KVLVYHGANR KN+ +F+EY+FVITTYS VEAEYRK ++PPKEKC +CGKSF+++KL H KYYCGP A+KT+ QSKQ+ K K + K K D D + SA ++ KS+LH VKW RIILDEAH+VKDRR NT KA+L+LES YKWALSGTPLQNRVGELYSLVRFLQI+PYSYY CKDCDC+ LDYSSS CP CPH VRHFCWWN+Y+A+PIQ GN GK AM+LLKHKILK+I+LRRTKKGRAADLALPPRI++LR+D++D+KE DYY SLY+ESQAQFN Y+QAGT+MNNYAHIFDLLTRLRQAVDHPYLVVYSS A R + D EQ CG+C+DP EDPVVT+C HVFCK+CLIDFSAS+G VSCPSC++ LTV+ T N G SK T+KGF+SSSILNRI L++FQTSTKIEALREEIRFM+ERDGSAK IVFSQFTSFLDLI Y+L KS + CVQL GSMS+ ARD+AI FTEDPDC+ Sbjct: 126 LLWEIWEEENDSWMAENYPNDPDLNIQDELVTETAQPPSDFIMPLLRYQKEWLAWALKQEESNARGGILADEMGMGKTAQAIALVLARRELAQAISDSSLLSSAPCSSQELLAVKGTLVICPVVAVIQWVSEIDRFTAKGSNKVLVYHGANREKNIDKFAEYEFVITTYSTVEAEYRKNVLPPKEKCQWCGKSFYEQKLPFHQKYYCGPHAVKTDKQSKQQSNPGGKPSKLKKNPIEG--DSEIDTGKGGRGKGIKRKSDTDAGSVDDSACASQDMSPRKSVLHCVKWNRIILDEAHYVKDRRSNTTKAILALESSYKWALSGTPLQNRVGELYSLVRFLQILPYSYYFCKDCDCRVLDYSSS-DCPHCPHKPVRHFCWWNRYIASPIQSQGNYGTGKDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQFNIYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSVALARRES--TNDAGSVEQPCGLCHDPVEDPVVTSCTHVFCKSCLIDFSASVGQVSCPSCAKTLTVEFTANDKGDHKSKATIKGFRSSSILNRIHLDNFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFLDLIHYALQKSGVGCVQLDGSMSMTARDSAITRFTEDPDCR 789
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_CRYNJ (DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=RAD5 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 8.276e-38 Identity = 122/448 (27.23%), Postives = 200/448 (44.64%), Query Frame = 3 Query: 1314 EGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIV------NGDRN-----------------------------------DDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGN----VSCPSCS--------------RLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468 EG SL + ++ RI+LDEAH +++R +KA L+ +WAL+GTP+ NR+ +LYSL+ FL+I P+ Y ++ +V P + + +A+ ++++ IL++ +LRR K R D + LPP+ + ++ E Y+ L ++ +F G M+NY I +L +LRQ VDHP LV+ S G + NG+ N +D +C +C++ D V+ C H C+ C++++ + + SCPSC R V+ T+A G ++ L ++ D TSTK+ AL ++ + + D AK +VFSQFTSFLDLI+ +L K I+ ++ G+MS A R I+ F Sbjct: 673 EGGSL-YDHEFLRIVLDEAHNIRNRLAMVSKACYELKGQRRWALTGTPIVNRLEDLYSLLHFLRITPWGNY-----------------------------SFFRSFVTVPFLNQDH-----KALNVVQY-ILESCLLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFIDLDADGRAMSNYTSILAMLMKLRQCVDHPLLVLGKSGEDGELGEKILESGAGNGEGNLRDMIAMYAGGIRAETPEDVDKAYAAKVLKELGEQEDTPICELCSNEMFDEVLLPCYHRSCQDCIVEWIGTCEDQNKIASCPSCGKGPIKLADLRSVQRRHKRVNPITDAYPGGRDPNLKSSNDTTVTLGKV---DLVTSTKLRALLRQLEEIRQEDPKAKALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEF 1081
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_NEUCR (DNA repair protein rad5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mus-41 PE=3 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 2.095e-37 Identity = 120/433 (27.71%), Postives = 197/433 (45.50%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV-----VYSSTAAQRAGNIVNGDRND---------------------------------DEQV--CGIC-NDPAEDPVVTACAHVFCKACLIDFSASLGNVS----CPSCSRLLTV----DLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468 L S+ + R+ILDEAH +K+R+ T++A + + ++W L+GTP+ NR+ +L+SLVRFL++ P++ +F +W ++ P + RA+ +++ +L+ +V+RRTK + D + LPP+ I + + E Y+ +++ ++ +QAGTVM + IF + RLRQ+ HP LV + A A ++ G +D DE V C IC +P D VT C H CK CL+D+ + + C C + + ++ + D ++S T + L R+ ND +S KI AL +R + + K +V SQFTSFL LI +L + I ++L GSMS AR A + F Sbjct: 724 LFSLNFFRVILDEAHNIKNRQAKTSRACYEIAAEHRWVLTGTPIVNRLEDLFSLVRFLRVEPWN-----------------------------NFSFWRTFITVPFESKN----FVRALDVVQ-TVLEPLVMRRTKDMKTPDGQFLVPLPPKHIEIVDIELSEPERAVYDYVFNRAKRTLFDNMQAGTVMKAFTSIFAQILRLRQSCCHPVLVRNQEILADEEEANMAADVAAGLADDMDLQTLIERFTATTDDASKTNNNFGAHVLRQIRDEAVNECPICAEEPMIDQAVTGCWHSACKKCLLDYIKHQTDRNEVPRCFQCREHINIRDIFEVIRHDDDLETSSTPGASPEPRISLQRVGAND--SSAKIVALISHLRTLRQEHPKMKSLVISQFTSFLSLISSALTRHKISFLRLDGSMSQKARAAVLTEF 1120 HSP 2 Score: 69.707 bits (169), Expect = 8.676e-11 Identity = 42/149 (28.19%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 639 LAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSST--DLPRIR-------------CTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQF-------SEYDFVITTYSIVEAEYRKF 1019 L+ +++ + GGILADEMG+GKTIQ ++L+ + R E + ++ AG ++ +LPR+ TLV+ P+ ++QW SE + + G+ K ++Y+GA + ++ + D +IT+Y +V +E+ + Sbjct: 569 LSLDFPKQEQHCLGGILADEMGLGKTIQMLSLIHSHR------SEVAIKAREAGPTSVNNLPRLPTVSGQKTTIDAPCTTLVVAPMSLLAQWQSEAENASKEGTFKTMMYYGAEKNVDLVTMCCEANAANAPDVIITSYGVVLSEFTQL 711
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: YG42_SCHPO (Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC23E6.02 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.474e-37 Identity = 127/438 (29.00%), Postives = 197/438 (44.98%), Query Frame = 3 Query: 1341 KWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD---LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQV---------------CGICNDP-AEDPVVTACAHVFCKACLI-------DFSASLGNVSC-PSCS---------RLLTVDL---------TTNADGGQSSK--TTLKGFKSSSILNRIQLN--------DFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 +W R+ILDEA +K+R A+ LES Y+W LSGTP+QN V E YSL++FL+I PYS D+SS ++ P +S N + P++ + +LK ++LRRTK + L LPP+ + E ++Y +L S +Q Q Y+Q GT+ +Y + LL RLRQA HP+L+V A + +R Q+ C +C D AE ++ C H C+ CL D + N + P CS RLL+ L +AD ++ + L + S+IL Q+ + TSTKIE ++ ++++ + K ++FSQF SFL+L + IK + G +S A R+ A+ +F DP+ + Sbjct: 532 EWYRVILDEAQTIKNRNTLAARGCCLLESTYRWCLSGTPMQNGVEEFYSLIKFLRIKPYS------------DWSSFSKDFTIPLSS-------NINTSAPMKRF--------------RGLLKAVLLRRTKNTKIDGKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYLQEGTITTHYGSLLVLLLRLRQACCHPWLIVAREAAVDDNDSFQAKNRAIYNQIYPEAVNRLKLIETLQCSLCMDVVAELLIIVPCGHFLCRECLTHVITSSEDMAKQTSNENISPKCSVCEEYIDTERLLSYALFRRYSGMAPIVDADNKLRTENISELLPKQYSNILENRQMGMKIFTDPKHWTTSTKIEKALNAVKEIIKKQPTDKILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEVDPNVR 936 HSP 2 Score: 92.4337 bits (228), Expect = 9.338e-18 Identity = 56/163 (34.36%), Postives = 90/163 (55.21%), Query Frame = 3 Query: 549 DLDQQ---NAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEI-DRFTSRGSTKVLVYHGANRGKNV-KQFSEYDFVITTYSIVEAEYRKFM 1022 DLD+Q + I E + A LI L+ +QKE L W + E+S+ KGGILAD+MG+GKT+QA+AL++ + P S ++ TL+I PV + QW +EI + V ++HG+++ + +Q YD V+TTY+++ E++ M Sbjct: 367 DLDEQLVNDPTIREGTPAG--LIPTLMEHQKEGLMWLKRLEESSKKGGILADDMGLGKTVQALALLVTR--------PPESKS-----------VKTTLIITPVSLLQQWHNEILTKIAPSHRPTVYIHHGSSKKHKIAEQLMSYDIVLTTYNVIAYEFKNKM 508
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_ASPFU (DNA repair protein rad5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rad5 PE=3 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.818e-36 Identity = 125/449 (27.84%), Postives = 196/449 (43.65%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQR--------------------------AGNIVNGD----------------RNDDEQVCGIC----NDPAEDPVVTACAHVFCKACLIDFSASLGNVSCP----SC-----SRLLTVDLTTNADGGQSSKTTLKGFKSSSILN---RIQLNDF-------QTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468 L SV + R+ILDEAH +K+RR TA+A L + ++W L+GTP+ NR+ +L+SLVRFLQ+ P++ +F +W ++ P + RA+ +++ +L+ +VLRRTK + + + LP R I + + +E + Y+ +++ ++ FN ++AGT++ +++ IF + RLRQ HP L + A + ++ N D R + G C +P DP VTAC H CK CL D+ + P SC SR + + + ++T L +S + RI L TS KI AL I + + K +VFSQFTSFLDLI L K+ I V+L G+M AR + F Sbjct: 693 LFSVDFFRVILDEAHVIKNRRSKTARACYELRATHRWVLTGTPIVNRLEDLFSLVRFLQVEPWN-----------------------------NFSFWKTFITVPFESKDY----VRALNVVQ-TVLEPLVLRRTKTMKTPEGEPLVPLPRRTIDIVEVELSEQEREIYDYIFTRAKRTFNDNIEAGTLLKSFSTIFAQILRLRQTCCHPILTRNKTIVADEEDAAATADAANELKDDMDLQELIDRFSASMENADTAEAQDPSAKFTTHALRQIQTESSGECPICSEEPMIDPAVTACWHSACKKCLEDYIRHQTDKGVPPRCFSCRAPVTSRDIFQVIRHQSPSSTPTETDLYSSTPASSPHPAPRISLRRIHPLSPSAHTSAKIHAL---INHLNRVPANTKSVVFSQFTSFLDLIGAQLTKAGISYVRLDGTMPQKARAEVLAEF 1104 HSP 2 Score: 85.1149 bits (209), Expect = 1.750e-15 Identity = 45/126 (35.71%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 678 GGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQ----TAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQF------SEYDFVITTYSIVEAEYRKFMM 1025 GGILADEMG+GKTI+ ++L+ + R V + P+ S++ + SS LP TLV+ P +SQW SE + + +G+ KVL+Y+G ++ N+++ + + +IT+Y +V +E R+ M Sbjct: 559 GGILADEMGLGKTIEMLSLIHSHRNVSPSRQGPSSSTELVRMPSSSSAILPAPNTTLVVAPTSLLSQWESEAMKASEQGTMKVLMYYGVDKSTNLQELCSAGNPAAPNIIITSYGVVLSESRQLAM 684
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_SCHPO (DNA repair protein rad8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rad8 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.265e-34 Identity = 115/430 (26.74%), Postives = 194/430 (45.12%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV----VYSST------AAQRAGNIVNGDRNDDEQV-------------------CGI-CNDPAEDPVVTACAHVFCKACL---IDFSASLGNVS--CPSCSRLLTVD-----LTTNADGGQSSKTTLKGFKSS-SILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPD 2483 L SV W R++LDE H +++R TAKA S+ S +W ++GTP+ N++ +LYSL++F++ P+ Y +W +V+ P Y + ++ K ++ IL+ +VLRRTK+ + + + LPP+ + + E Y+SLY+++++ N + AGT+ NY I LL RLRQA P L+ + S T + ++ +++N + + C I CN+P ++P++ C H C CL I + + C +C + +G QS T L G + NR+Q S K+ L ++R + K ++FSQFT+FLD+I L + + G+MS R A+++F DPD Sbjct: 645 LFSVHWFRVVLDEGHNIRNRESKTAKACHSISSQNRWVITGTPIVNKLDDLYSLIKFMRYEPWCNY-----------------------------TYWQTFVSLP---YQSKDVLKALNVV--QSILEFLVLRRTKETKDRNGNSIVTLPPKTVKIEYLDFSDSERKIYDSLYTKAKSTVNANIVAGTLFRNYTTILGLLLRLRQACCDPVLLSNMTINSETFDDFEFSVEQFNSLINQFVVTGKPIPSDILKIDTLKSFEALITECPICCNEPIQNPLLLNCKHACCGDCLSEHIQYQKRRNIIPPLCHTCRQPFNEQDVYKPFFVKNNGTQS--TLLVGEEVKWKYWNRLQ------SVKLNGLLGQLRQLTHSSEPEKVVIFSQFTTFLDIIADVLESEKMGYARFDGTMSQQMRSTALETFRNDPD 1032
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: YBMA_SCHPO (Uncharacterized ATP-dependent helicase C582.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC582.10c PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.183e-33 Identity = 116/402 (28.86%), Postives = 173/402 (43.03%), Query Frame = 3 Query: 1320 KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKK---------GRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRN-----DDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQ--SSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTED 2477 K L + W RIILDEAH +K++ +A A +L+ + +W L+GTPLQN V ELYSLV+FL I P++ D S W ++ P+ + KR +LL I+LRRTK G L L R++ + E D+Y +L + + +V +G + NY +I LL RLRQA +HP + + A N ++G N D+ V + N E + + FC C+ + C CSR + G Q + KT K K IL + L++ + + LR K I+FSQFT+FLD+I L K+ I V+ G M+ AR+ ++ D Sbjct: 370 KPSLFAFYWWRIILDEAHTIKNKSSKSALACCALQGINRWCLTGTPLQNNVDELYSLVKFLHINPFN------------DQSV-----------------WKDQISLPLCQGEENLVFKRLRMLLSV-----IMLRRTKTLLEANAGKDGTGGALKLSKRLVYKVICKFEESERDFYSNLARNMERTMSNFVNSGKLGKNYTNILCLLLRLRQACNHPQSLNFQFEQDVDAFNALDGAANTNKLASDQDVDDLAN-LLETVEIGSRKKSFCTICMAELPPDFHEKKCKDCSR----NFKELDKGIQDPNDKTLYKSSKIREILKILSLDEQEEDDTVRGLR-------------KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSD 719 HSP 2 Score: 92.8189 bits (229), Expect = 5.587e-18 Identity = 62/168 (36.90%), Postives = 90/168 (53.57%), Query Frame = 3 Query: 609 IPLLRYQKEWLAWALKQE---DSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKE-KCPYCGKSFHQKKLSVHLKYY 1100 I LL +Q + L W +E S+ GGILAD+MG+GKTIQ IAL+L+ H + + S I+ TLV+ P+ + QW SE+ ++ +VYHGA+R K +K EYD VITTY I+ +E+ + K P KS+ +KK S+ Y+ Sbjct: 231 IRLLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALILS-----HPLPKKKHS------------IKSTLVVAPLSLIKQWESEVQ---TKSKLTAIVYHGASRYKLLKVIHEYDVVITTYQILVSEWVSHNTTGTDGKSPTEAKSYEKKKPSLFAFYW 378
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_CANGA (DNA repair protein RAD5 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RAD5 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.157e-33 Identity = 110/438 (25.11%), Postives = 194/438 (44.29%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQ----------------------------AVDHPYLVVYSSTAAQRAGNIVNGDRN-----------DDEQV----CGICN-DPAE--DPVVTACAHVFCKACLIDFSASLGNVS----CPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHK----SSIKCVQLVGSMSLAARDAAIKSF 2468 + S+++ RIILDE H ++++ T+KAVL L S Y+W L+GTP+ NR+ +LYSLV+FL++ P+S +W +++ P + K+A ++ + I++ ++LRRTK+ + D + LPP+ I + + + K+ YE ++ F + +Q+G ++ Y+ I + RLRQ +VD L+ + N + + D Q+ C IC +P E VVT C HVFCK CL ++ S CP+C R + ++ + G S IL I + + K+ AL ++ + + + +VFSQF+S+LD+++ L++ + +K + G +SL R A ++ F Sbjct: 651 IFSIEFFRIILDEGHTIRNKSTITSKAVLELSSKYRWILTGTPIINRLDDLYSLVKFLKLEPWS-----------------------------QIGYWKQFITNPFEERN----FKQAFDVV-NAIMEPVLLRRTKQMKDTDGNPLVQLPPKEIVIEKLQLSKKQKLIYEEFLQRAEKTFRSGLQSGDLLKKYSTILVHILRLRQVCCDSNLIGTLDENDEDLSSGNNKLITESVDVKTLIPDTEEEEDEVPPFENDELDKLIESVEAKFIDSNQLIPVECSICTAEPIESSSAVVTECEHVFCKECLEEYGNFQKEKSLQQKCPNCRRDINLNRCLAFEKG-----------SDGILKLIHFDRKERPAKLNALIRHLQQLQDSSAGEQVVVFSQFSSYLDILESQLNEVYSSNKLKVYKFDGRLSLKERTAVLEDF 1043 HSP 2 Score: 70.0922 bits (170), Expect = 7.049e-11 Identity = 42/128 (32.81%), Postives = 69/128 (53.91%), Query Frame = 3 Query: 678 GGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAG-SSTDLPRI---------RCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGAN----RGKNVKQFSEYDFVITTYSIVEAEYRKF 1019 GGIL+DEMG+GKTI A++LVL + + HT + +++ SS D+ I + TL+I P+ ++QW E D+ + +Y+G N + +K+ + V+TTY IV+ E+ K Sbjct: 508 GGILSDEMGLGKTISALSLVLMRPKDEHTTSQSLFHQESSNLSSDDVIEIKEPERSYAYKTTLIIVPMSLLTQWRDEFDKVNNNAGLTCELYYGGNVSSLKSLLIKRKNPPTVVLTTYGIVQNEWTKL 635
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: YF2C_SCHPO (Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A2.12 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.099e-32 Identity = 119/447 (26.62%), Postives = 196/447 (43.85%), Query Frame = 3 Query: 1311 PEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKY---VATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLA---LPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSST----AAQRAGNIVNGDRNDD----EQV-------CGICNDPAEDPV-VTACAHVFCKACLIDF--------SASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSI----------------LNRI----------QLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPD 2483 P SLL + W RI+LDEAH +++R AK + L++ Y+W LSGTP+QN + E YSL++FL+I PY C W+ + ++ P++ Y +I + A+ L+ +L + V RRTK+ R +L LPP+ I + +E Y S +Q+ + Y ++ Y + L RLRQ HP+LV SS + + N+ N ++ D E++ C +C DP PV + C H C+ C+ S S CP C + D +A Q+ L K + NRI + +++++S+K+ R+ I ++ + K +V+SQF+ +L L+ + L +I+ V+ G+MS R ++ SF D D Sbjct: 381 PPACSLLET-SWYRIVLDEAHTIRNRDTLAAKCCVKLDAKYRWCLSGTPIQNHIDEFYSLLKFLRIKPY--------------------------------CVWSLFAKDISRPLKSY-RADIVEAALKRLR-ILLASTVFRRTKETRVNNLPIVNLPPKTIRTVSVNLLPEERALYNEQMSSAQSLVDNYFNNDHDLSRYGFLLVSLLRLRQFCCHPWLVKSSSLDNSFRIRDSENVRNACKSLDPLTIERIATLQDFNCSVCLDPCLAPVFIIPCGHFTCQECMSMLVGQKYGSSSTSTIIAKCPMCRGNIVQDSLVDATILQAIHGPLNSLKQLELDMNQSFSEQESIKLRWENRIDQMFTKKFGKRASEWKSSSKLNQARQTILDIIGSKRNEKILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNNDKD 792 HSP 2 Score: 75.8702 bits (185), Expect = 1.159e-12 Identity = 50/160 (31.25%), Postives = 83/160 (51.88%), Query Frame = 3 Query: 546 VDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEID-RFTSRGSTKVLVYHGANRGKNVKQF--SEYDFVITTYSIVEAEYRK 1016 +DL +N + S+ L++ LL +Q E AW E S+ GG++AD+MG+GKTIQ IAL+L ++ S D P + L++ V + QW E+ + V ++HG+ + KN+ + S+YD V+TTYS++ E ++ Sbjct: 232 IDLQLKNEQV-----QSAGLLVSLLPHQVEGHAWMESMEQSSKCGGVMADDMGLGKTIQTIALLLTQK------------------SQD-PLRKTNLIVVSVALLHQWAEELSTKVHPSKKLSVYIHHGSTK-KNLDSYELSQYDVVLTTYSMLAYEMKQ 366
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_CANAL (DNA repair protein RAD5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RAD5 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.969e-30 Identity = 109/432 (25.23%), Postives = 189/432 (43.75%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRT---KKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDD----------------------------------EQVCGICND---PAEDPVVTACAHVFCKACL---IDFSASLGNVS-CPSC----SRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCV--QLVGSMSLAARDAAIKSFTE 2474 L+SVK+ RIILDE H +++R TAK+V L+S KW L+GTP+ NR+ +LYSL +FL++ P++ +F +W +V P + +I + ++ IL+ I LRRT KK + LP + + + + + E Y+ + A F +++G ++ Y I + RLRQ H L+ A + I+ ++++D E C IC P + VVT CAH FC +C+ +DF L CP+C S+ + G + + + ++S+KI+AL ++ + + ++K IVFSQF+S+LD+I+ L +S + + + G +++ R ++SF + Sbjct: 583 LYSVKFFRIILDEGHNIRNRNTKTAKSVYELQSSRKWILTGTPIVNRLDDLYSLTKFLELDPWN-----------------------------NFSYWKTFVTLPFEQ---KKISQTLDVV--KSILEPIFLRRTKSQKKNGKPLVELPAKEVVIEQIKFNDDEEKLYQWFKDRAYASFAEGIKSGQLLRRYTQILTHILRLRQVCCHVDLI---GGAHEMDDEIIEAEQDEDMRKFLTSIKENQIRFANDTDVKEKMYNLYGKIKEENECSICTQVPIPYSEMVVTPCAHTFCLSCILEHLDFQKELKKEKLCPNCRSPISKYQLFRIRNQPTKGNEIRFHTQKDAPDYSFQLYLYDPNRSSSKIQALVRHLKALHSQSPNSKVIVFSQFSSYLDIIQSELKLASEEFIVFKFDGRLNMNDRTKLLESFNQ 977
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_YEAST (DNA repair protein RAD5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD5 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.134e-30 Identity = 112/443 (25.28%), Postives = 198/443 (44.70%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV----------------VYSSTAAQRAGNIVNGDRNDD----EQV---------------------CGICNDPAED---PVVTACAHVFCKACLIDF-----SASLGNVSCPSCS------RLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIK----YSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468 L SV + RII+DE H +++R T+KAV++L+ KW L+GTP+ NR+ +LYSLV+FL++ P+ R +W +V+TP + K+A ++ + IL+ ++LRRTK+ + D + LPP+ + ++R + Y+ L +++ + + G ++ Y+ I + RLRQ HP L+ V T + V +R D+ E++ C IC D + T C H FC+ CL ++ S +LG + CP+C RLL + + TN++ S K + +S S+KI AL +E++ + + + ++FSQF+++LD+++ ++ K K + G +SL R + + F Sbjct: 670 LFSVNFYRIIIDEGHNIRNRTTVTSKAVMALQGKCKWVLTGTPIINRLDDLYSLVKFLELDPW-----------------------------RQINYWKTFVSTPFESKNY----KQAFDVV-NAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQDLLYKFLLDKAEVSVKSGIARGDLLKKYSTILVHILRLRQVCCHPGLIGSQDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQSLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLG-LKCPNCRNQIDACRLLAL-VQTNSN---SKNLEFKPYSPAS-----------KSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADF 1062 HSP 2 Score: 56.9954 bits (136), Expect = 7.565e-7 Identity = 38/128 (29.69%), Postives = 62/128 (48.44%), Query Frame = 3 Query: 675 KGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRI----------RCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGAN----RGKNVKQFSEYDFVITTYSIVEAEYRK 1016 KGGIL+DEMG+GKT+ A +LVL+ + + + S +LP + TL++ P+ ++QW +E + + VY+G N + K + V+TTY IV+ E+ K Sbjct: 526 KGGILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIENTAVSDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKTLLTKTKTPPTVVLTTYGIVQNEWTK 653 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0000197 ID=g.arboreum_cottongen_reftransV1_0000197; Name=g.arboreum_cottongen_reftransV1_0000197; organism=Gossypium arboreum; type=contig; length=2490bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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