g.arboreum_cottongen_reftransV1_0000197, g.arboreum_cottongen_reftransV1_0000197 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0000197
Unique Nameg.arboreum_cottongen_reftransV1_0000197
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length2490
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr6chromosomeg.arboreum_cottongen_reftransV1_0000197:1..2490 .
Chr6:95626..102793 -
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A068URB3_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_47 OS=Coffea canephora GN=GSCOC_T00031650001 PE=4 SV=1)

HSP 1 Score: 945.266 bits (2442), Expect = 0.000e+0
Identity = 454/678 (66.96%), Postives = 546/678 (80.53%), Query Frame = 3
Query:  483 LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEG--------KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADG-GQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            L+WEV + E E+WI EN   DVDL  QN ++ ET +  ++LIIPLLRYQKEWLAWALKQE+S T+GGILADEMGMGKT QAIALV+AK+++   I EP++ +    SS+  P ++ TLVICP+VAV QWVSEIDRFT++GS KVLVYHG+NRG+N+ QFSEYDFVITTYSIVEAEYR+ +MPPK KC +CGK  ++ K+SVHLKY+CGPDAIKT  QSKQ+RKK  S   + K++    E D+       + +  K+          +     + +P          KS+LHSVKWERIILDEAH++KDRR +T +AV +L+SLYKWALSGTPLQNRVGELYSLVRFL+IVPYSYY CKDCDC++LDYS+ST CP CPH SVRHFCWWN++VA+PI++ GN   G++AM+LLKH+ILK+IVLRRTKKGRAADLALPPRI++LRRD +DIKE DYY SLY+ESQAQFNTY++A T+MNNYAHIFDLLTRLRQAVDHPYLVVYSSTAA R G+I N       +VCG+C++ AED VVT+C HVFCK+CLIDFSAS+G +SCPSC++LLTVD T N +   Q  KTT+KGFK SSI+NRI+L+DFQTSTKI+ALREEIRFMVERDGSAKGIVFSQFTSFLDLI YSL KS + CVQL GSMS+ ARDAAIK FTEDPDC+
Sbjct:  142 LVWEVLQHEIERWIKENEANDVDLSNQNEILAETVEPPANLIIPLLRYQKEWLAWALKQEESTTRGGILADEMGMGKTAQAIALVVAKQEIQKAISEPSLVASAPSSSSTFPAVKGTLVICPLVAVVQWVSEIDRFTTKGSNKVLVYHGSNRGRNIDQFSEYDFVITTYSIVEAEYRRNVMPPKHKCQWCGKLLYEHKMSVHLKYFCGPDAIKTAKQSKQQRKKSNSKTTTSKQNLEFDEDDAFDSNGDMQKRGRKKGAKTSNGIGGSGNAFAYGIPADIGESSSTKKSILHSVKWERIILDEAHYIKDRRSSTTRAVFALQSLYKWALSGTPLQNRVGELYSLVRFLEIVPYSYYYCKDCDCRSLDYSTSTDCPHCPHKSVRHFCWWNRHVASPIKYAGNLGEGRKAMLLLKHRILKSIVLRRTKKGRAADLALPPRIVTLRRDELDIKEEDYYTSLYNESQAQFNTYIEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAGRGGSIRNAPSG---EVCGLCHENAEDAVVTSCTHVFCKSCLIDFSASMGQISCPSCAKLLTVDFTGNKENEDQMPKTTIKGFKPSSIINRIRLDDFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLIHYSLQKSGVSCVQLDGSMSMTARDAAIKRFTEDPDCR 816          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: K4C0N1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc05g044480.2 PE=4 SV=1)

HSP 1 Score: 943.725 bits (2438), Expect = 0.000e+0
Identity = 479/799 (59.95%), Postives = 593/799 (74.22%), Query Frame = 3
Query:  132 MQLRSRKRTSNFSTNE--EHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFT---EPPTNRGNGEQ----ILSE---QNESQFDFNVSXXXXXXXXXXXXXXRSGQP-LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            M+LRSR  +S+    +  ++ DSSD+ D  + +   SD   Y+ SSD D+ +E +++L  + V +     +      E   + G  E+    +++E     E    +     +  +  K + K +  +P L+WE+WE+E++ W+ EN   D   + Q+ ++TET+   SDLI+PLLRYQKEWL WALKQE+S  +GGILADEMGMGKT+QAIALVLAKR++   I   ++ S    +S  LP ++ +LVICPVVAV QWVSEIDRFT++GS K+LVYHG NR KN+ +F+EYDFVITTYS VEAEYRK +MPPKEKC +CGKSF+++KLSVH KY+CGPDA+KT  QSKQ+ K      K  K H       +  +    K    K + D     D   AG+  ++   KS+LHSVKW RIILDEAH+VKDRR NT +A+L+LES YKWALSGTPLQNRVGELYSLVRFLQIVPYSYY CKDCDC+ LDYSSS +CP CPH S+RHFCWWN+Y+A+PIQ+ GN   G+ AM+LLKHKILK+I+LRRTKKGRAADLALPPRI++LR+D++D+KE DYY SLY+ESQAQFNTY+QAGT+MNNYAHIFDLLTRLRQAVDHPYLVVYSSTA  R G+    D    EQ+CG+C+DP EDPVVT+C H+FCK+CLIDFSAS+G VSCPSCS  LTVD T N  G Q SK T+KGF+SSSILNRI L++FQTSTKIEALREEIRFM+E DGSAK IVFSQFTSFLDLI YSL KS + CVQL GSMS+ ARD+AI  FTEDPDC+
Sbjct:    1 MKLRSRPSSSSAKGKQRRQYQDSSDE-DYLLSMSSDSD---YIGSSDEDVADE-VVNLTEEVVYSNRRKRNRGKKKIETKEDHGEEEENVDWVMNEVGGGGEVDAGYLQLIGRIEDRKKIRVKNQKKRPTLLWEIWEEENDSWMAENYPNDPHFNSQDELVTETAQPPSDLIMPLLRYQKEWLTWALKQEESTARGGILADEMGMGKTVQAIALVLAKREIGQAISGSSLLSPAPCTSQQLPVMKGSLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGTNRVKNIDKFAEYDFVITTYSTVEAEYRKNVMPPKEKCQWCGKSFYEQKLSVHQKYFCGPDAVKTAKQSKQQSKPGGKPSKLKKDHIEGDSKINTGKRGSGKGIKRKSEADAGCVDDLAFAGQ--DMSTRKSILHSVKWNRIILDEAHYVKDRRSNTTRAILALESSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRVLDYSSS-ECPHCPHKSIRHFCWWNRYIASPIQNQGNRGTGRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARRGS--TNDAGSVEQLCGLCHDPVEDPVVTSCTHIFCKSCLIDFSASVGQVSCPSCSEPLTVDFTANDKGDQKSKATIKGFRSSSILNRIHLDNFQTSTKIEALREEIRFMIEIDGSAKAIVFSQFTSFLDLIHYSLQKSGVSCVQLDGSMSMTARDSAITRFTEDPDCR 789          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: V7BY35_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G115700g PE=4 SV=1)

HSP 1 Score: 926.391 bits (2393), Expect = 0.000e+0
Identity = 458/670 (68.36%), Postives = 536/670 (80.00%), Query Frame = 3
Query:  483 LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLID-FSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            L+W  WE+E EKWID+++  DVDLD Q+ V+ ET++A SDL +PLLRYQ+EWLAWALKQE S ++GGILADEMGMGKTIQAIALVLAKR+    I EP+   Q+   S+ L  I+ TLVICPVVAV+QWVSEIDRFT +GSTKVLVYHGANRG++  +F++YDFVITTYS+VE EYRK MMPPKE+CPYCGK F   KL  H  Y+CGPDA++TE QSKQ +KK +      K+  S        +    K   + ED D               +   KS LH+VKW+RIILDEAH++K R CNTAKAVL+L+S YKWALSGTPLQNRVGELYSL+RFLQI PYSYYLCKDCDC+ LD+SS  +C  C H+SVRHFCWWNKYVATPIQ +GNG+ GKRAMILLKHK+LKNIVLRRTK GRAADLALPPRI+SLR+D +DIKE DYYESLY+ESQAQFNTY++A T+M+NYAHIFDLLTRLRQAVDHPYLVVYS +++ R+  + N +    EQ+CGIC++P ED VVT+C H FC+ACLID +S SLG VSCP+CS+LLTVDLT N D G  +KTT+KGF+SSSILNRI L +FQTSTK EALREEIRFMVERDGSAKGIVFSQFTSFLDLI YSLHKS + CVQL GSMSL ARDAAI+ FTEDPDCK
Sbjct:  176 LLWNAWEEEQEKWIDQHILEDVDLDNQSEVMNETAEAPSDLTMPLLRYQREWLAWALKQEHSLSRGGILADEMGMGKTIQAIALVLAKRE-FQDICEPD---QSIPCSSSLSAIKGTLVICPVVAVTQWVSEIDRFTLKGSTKVLVYHGANRGRSGDRFADYDFVITTYSVVENEYRKHMMPPKERCPYCGKLFLPSKLMYHQNYFCGPDAVRTEKQSKQAKKKREVTKGKTKECDSRKILKGSIKEKGDKMGIDMEDSDAVP------------VRSDKSFLHAVKWQRIILDEAHYIKSRHCNTAKAVLALDSTYKWALSGTPLQNRVGELYSLIRFLQITPYSYYLCKDCDCRILDHSSK-ECSVCTHSSVRHFCWWNKYVATPIQSFGNGDSGKRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRKDCLDIKEQDYYESLYNESQAQFNTYIEANTLMHNYAHIFDLLTRLRQAVDHPYLVVYSQSSSSRSAVMAN-NATTVEQICGICHEPIEDLVVTSCEHSFCRACLIDYYSTSLGQVSCPACSKLLTVDLTPNKDVGDQAKTTIKGFRSSSILNRIHLENFQTSTKTEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVSCVQLNGSMSLTARDAAIRRFTEDPDCK 827          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: G7JEP7_MEDTR (RING/U-box helicase OS=Medicago truncatula GN=MTR_4g049500 PE=4 SV=1)

HSP 1 Score: 926.391 bits (2393), Expect = 0.000e+0
Identity = 467/673 (69.39%), Postives = 527/673 (78.31%), Query Frame = 3
Query:  483 LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEG--KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQR-AGNIV-NGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            L+W  W+QEHEKWID+NL  DV LDQ + V+ ET++ASSDLI+PLLRYQ+EWLAWALKQE+S T+GGILADEMGMGKTIQAIALVL+KR++     EP   S + GSS  LP I+ TLVICPVVAV+QWVSEI RFT +GSTKVLVYHG  R K+  +FSEYDFVITTYS VE+EYRK +MPPKEKC YCG+ FH   L  H KYYCGPDAI+T  Q+KQ +KK +                                         +   KE +L EG  KS LH+VKW+RIILDEAHF+K R  NTAKAVL+LES YKWALSGTPLQNRVGELYSLVRFLQIVPYSY LCKDCDC+TLD+SSS  C  C H+SVRHFCWWNK +ATPIQ  G G+ GKRAMILLK+K+LK+IVLRRTK GRAADLALPPRI+SLRRD++DIKE DYYESLY+ESQAQFNTYV+  T+ NNYAHIFDLLTRLRQAVDHPYLVVYS TAA R  GN+  NGD    EQ CGIC+D  EDPVVT+C H FCK CLIDFSASLG +SCPSCS+LLTVDLT+N D      TT+KGF+SSSILNRIQ+ +FQTSTKIEALREEIRFMVERDGSAK IVFSQFTSFLDLI YSL KS + CVQLVGSM+L ARD AIK FT+DPDCK
Sbjct:  196 LLWHAWKQEHEKWIDQNLLEDVTLDQ-SEVMNETAEASSDLIVPLLRYQREWLAWALKQEESVTRGGILADEMGMGKTIQAIALVLSKRELQQMCCEPFEHSDSPGSSKVLPVIKGTLVICPVVAVTQWVSEIARFTLKGSTKVLVYHGPKRWKSADKFSEYDFVITTYSTVESEYRKHVMPPKEKCQYCGRLFHPPSLVFHQKYYCGPDAIRTTKQAKQTKKKKRGQSSKLDGELEQ----------------------------GSIKKKEEDL-EGNDKSFLHAVKWQRIILDEAHFIKSRHSNTAKAVLALESFYKWALSGTPLQNRVGELYSLVRFLQIVPYSYNLCKDCDCRTLDHSSSKVCSNCSHSSVRHFCWWNKNIATPIQSSGYGDDGKRAMILLKNKLLKSIVLRRTKIGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQAQFNTYVEENTLTNNYAHIFDLLTRLRQAVDHPYLVVYSPTAAARQGGNLASNGDV---EQECGICHDTVEDPVVTSCEHTFCKGCLIDFSASLGQISCPSCSKLLTVDLTSNKDAVVDKTTTIKGFRSSSILNRIQIENFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYSLQKSGVSCVQLVGSMTLTARDNAIKKFTDDPDCK 835          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: K4D0D1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc10g049740.1 PE=4 SV=1)

HSP 1 Score: 920.613 bits (2378), Expect = 0.000e+0
Identity = 444/669 (66.37%), Postives = 526/669 (78.62%), Query Frame = 3
Query:  483 LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            L+WE+WE+E++ W+ EN   D DL+ Q+ ++TET+   SD I+PLLRYQKEWLAWALKQE+SN +GGILADEMGMGKT QAIALVLA+R++   I + ++ S    SS +L  ++ TLVICPVVAV QWVSEIDRFT++GS KVLVYHGANR KN+ +F+EY+FVITTYS VEAEYRK ++PPKEKC +CGKSF+++KL  H KYYCGP A+KT+ QSKQ+        K  K                 + K  K   D D    + SA    ++   KS+LH VKW RIILDEAH+VKDRR NT KA+L+LES YKWALSGTPLQNRVGELYSLVRFLQI+PYSYY CKDCDC+ LDYSSS  CP CPH  VRHFCWWN+Y+A+PIQ  GN   GK AM+LLKHKILK+I+LRRTKKGRAADLALPPRI++LR+D++D+KE DYY SLY+ESQAQFN Y+QAGT+MNNYAHIFDLLTRLRQAVDHPYLVVYSS A  R  +    D    EQ CG+C+DP EDPVVT+C HVFCK+CLIDFSAS+G VSCPSC++ LTV+ T N  G   SK T+KGF+SSSILNRI L++FQTSTKIEALREEIRFM+ERDGSAK IVFSQFTSFLDLI Y+L KS + CVQL GSMS+ ARD+AI  FTEDPDC+
Sbjct:  126 LLWEIWEEENDSWMAENYPNDPDLNIQDELVTETAQPPSDFIMPLLRYQKEWLAWALKQEESNARGGILADEMGMGKTAQAIALVLARRELAQAISDSSLLSSAPCSSQELLAVKGTLVICPVVAVIQWVSEIDRFTAKGSNKVLVYHGANREKNIDKFAEYEFVITTYSTVEAEYRKNVLPPKEKCQWCGKSFYEQKLPFHQKYYCGPHAVKTDKQSKQQSNPGGKPSKLKKNPIEG--DSEIDTGKGGRGKGIKRKSDTDAGSVDDSACASQDMSPRKSVLHCVKWNRIILDEAHYVKDRRSNTTKAILALESSYKWALSGTPLQNRVGELYSLVRFLQILPYSYYFCKDCDCRVLDYSSS-DCPHCPHKPVRHFCWWNRYIASPIQSQGNYGTGKDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQFNIYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSVALARRES--TNDAGSVEQPCGLCHDPVEDPVVTSCTHVFCKSCLIDFSASVGQVSCPSCAKTLTVEFTANDKGDHKSKATIKGFRSSSILNRIHLDNFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFLDLIHYALQKSGVGCVQLDGSMSMTARDSAITRFTEDPDCR 789          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_CRYNJ (DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=RAD5 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.276e-38
Identity = 122/448 (27.23%), Postives = 200/448 (44.64%), Query Frame = 3
Query: 1314 EGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIV------NGDRN-----------------------------------DDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGN----VSCPSCS--------------RLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468
            EG SL +  ++ RI+LDEAH +++R    +KA   L+   +WAL+GTP+ NR+ +LYSL+ FL+I P+  Y                              ++  +V  P  +  +     +A+ ++++ IL++ +LRR K  R  D    + LPP+ + ++       E   Y+ L   ++ +F      G  M+NY  I  +L +LRQ VDHP LV+  S      G  +      NG+ N                                   +D  +C +C++   D V+  C H  C+ C++++  +  +     SCPSC               R   V+  T+A  G           ++  L ++   D  TSTK+ AL  ++  + + D  AK +VFSQFTSFLDLI+ +L K  I+ ++  G+MS A R   I+ F
Sbjct:  673 EGGSL-YDHEFLRIVLDEAHNIRNRLAMVSKACYELKGQRRWALTGTPIVNRLEDLYSLLHFLRITPWGNY-----------------------------SFFRSFVTVPFLNQDH-----KALNVVQY-ILESCLLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFIDLDADGRAMSNYTSILAMLMKLRQCVDHPLLVLGKSGEDGELGEKILESGAGNGEGNLRDMIAMYAGGIRAETPEDVDKAYAAKVLKELGEQEDTPICELCSNEMFDEVLLPCYHRSCQDCIVEWIGTCEDQNKIASCPSCGKGPIKLADLRSVQRRHKRVNPITDAYPGGRDPNLKSSNDTTVTLGKV---DLVTSTKLRALLRQLEEIRQEDPKAKALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEF 1081          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_NEUCR (DNA repair protein rad5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mus-41 PE=3 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 2.095e-37
Identity = 120/433 (27.71%), Postives = 197/433 (45.50%), Query Frame = 3
Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV-----VYSSTAAQRAGNIVNGDRND---------------------------------DEQV--CGIC-NDPAEDPVVTACAHVFCKACLIDFSASLGNVS----CPSCSRLLTV----DLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468
            L S+ + R+ILDEAH +K+R+  T++A   + + ++W L+GTP+ NR+ +L+SLVRFL++ P++                             +F +W  ++  P +         RA+ +++  +L+ +V+RRTK  +  D    + LPP+ I +    +   E   Y+ +++ ++      +QAGTVM  +  IF  + RLRQ+  HP LV     +     A  A ++  G  +D                                 DE V  C IC  +P  D  VT C H  CK CL+D+     + +    C  C   + +    ++  + D  ++S T     +    L R+  ND  +S KI AL   +R + +     K +V SQFTSFL LI  +L +  I  ++L GSMS  AR A +  F
Sbjct:  724 LFSLNFFRVILDEAHNIKNRQAKTSRACYEIAAEHRWVLTGTPIVNRLEDLFSLVRFLRVEPWN-----------------------------NFSFWRTFITVPFESKN----FVRALDVVQ-TVLEPLVMRRTKDMKTPDGQFLVPLPPKHIEIVDIELSEPERAVYDYVFNRAKRTLFDNMQAGTVMKAFTSIFAQILRLRQSCCHPVLVRNQEILADEEEANMAADVAAGLADDMDLQTLIERFTATTDDASKTNNNFGAHVLRQIRDEAVNECPICAEEPMIDQAVTGCWHSACKKCLLDYIKHQTDRNEVPRCFQCREHINIRDIFEVIRHDDDLETSSTPGASPEPRISLQRVGAND--SSAKIVALISHLRTLRQEHPKMKSLVISQFTSFLSLISSALTRHKISFLRLDGSMSQKARAAVLTEF 1120          

HSP 2 Score: 69.707 bits (169), Expect = 8.676e-11
Identity = 42/149 (28.19%), Postives = 79/149 (53.02%), Query Frame = 3
Query:  639 LAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSST--DLPRIR-------------CTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQF-------SEYDFVITTYSIVEAEYRKF 1019
            L+    +++ +  GGILADEMG+GKTIQ ++L+ + R       E  + ++ AG ++  +LPR+               TLV+ P+  ++QW SE +  +  G+ K ++Y+GA +  ++          +  D +IT+Y +V +E+ + 
Sbjct:  569 LSLDFPKQEQHCLGGILADEMGLGKTIQMLSLIHSHR------SEVAIKAREAGPTSVNNLPRLPTVSGQKTTIDAPCTTLVVAPMSLLAQWQSEAENASKEGTFKTMMYYGAEKNVDLVTMCCEANAANAPDVIITSYGVVLSEFTQL 711          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: YG42_SCHPO (Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC23E6.02 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.474e-37
Identity = 127/438 (29.00%), Postives = 197/438 (44.98%), Query Frame = 3
Query: 1341 KWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD---LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQV---------------CGICNDP-AEDPVVTACAHVFCKACLI-------DFSASLGNVSC-PSCS---------RLLTVDL---------TTNADGGQSSK--TTLKGFKSSSILNRIQLN--------DFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            +W R+ILDEA  +K+R    A+    LES Y+W LSGTP+QN V E YSL++FL+I PYS            D+SS ++    P +S       N   + P++ +                +LK ++LRRTK  +      L LPP+        +   E ++Y +L S +Q Q   Y+Q GT+  +Y  +  LL RLRQA  HP+L+V    A     +    +R    Q+               C +C D  AE  ++  C H  C+ CL        D +    N +  P CS         RLL+  L           +AD    ++  + L   + S+IL   Q+          + TSTKIE     ++ ++++  + K ++FSQF SFL+L      +  IK +   G +S A R+ A+ +F  DP+ +
Sbjct:  532 EWYRVILDEAQTIKNRNTLAARGCCLLESTYRWCLSGTPMQNGVEEFYSLIKFLRIKPYS------------DWSSFSKDFTIPLSS-------NINTSAPMKRF--------------RGLLKAVLLRRTKNTKIDGKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYLQEGTITTHYGSLLVLLLRLRQACCHPWLIVAREAAVDDNDSFQAKNRAIYNQIYPEAVNRLKLIETLQCSLCMDVVAELLIIVPCGHFLCRECLTHVITSSEDMAKQTSNENISPKCSVCEEYIDTERLLSYALFRRYSGMAPIVDADNKLRTENISELLPKQYSNILENRQMGMKIFTDPKHWTTSTKIEKALNAVKEIIKKQPTDKILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEVDPNVR 936          

HSP 2 Score: 92.4337 bits (228), Expect = 9.338e-18
Identity = 56/163 (34.36%), Postives = 90/163 (55.21%), Query Frame = 3
Query:  549 DLDQQ---NAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEI-DRFTSRGSTKVLVYHGANRGKNV-KQFSEYDFVITTYSIVEAEYRKFM 1022
            DLD+Q   +  I E + A   LI  L+ +QKE L W  + E+S+ KGGILAD+MG+GKT+QA+AL++ +         P   S           ++ TL+I PV  + QW +EI  +        V ++HG+++   + +Q   YD V+TTY+++  E++  M
Sbjct:  367 DLDEQLVNDPTIREGTPAG--LIPTLMEHQKEGLMWLKRLEESSKKGGILADDMGLGKTVQALALLVTR--------PPESKS-----------VKTTLIITPVSLLQQWHNEILTKIAPSHRPTVYIHHGSSKKHKIAEQLMSYDIVLTTYNVIAYEFKNKM 508          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_ASPFU (DNA repair protein rad5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rad5 PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.818e-36
Identity = 125/449 (27.84%), Postives = 196/449 (43.65%), Query Frame = 3
Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQR--------------------------AGNIVNGD----------------RNDDEQVCGIC----NDPAEDPVVTACAHVFCKACLIDFSASLGNVSCP----SC-----SRLLTVDLTTNADGGQSSKTTLKGFKSSSILN---RIQLNDF-------QTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468
            L SV + R+ILDEAH +K+RR  TA+A   L + ++W L+GTP+ NR+ +L+SLVRFLQ+ P++                             +F +W  ++  P +         RA+ +++  +L+ +VLRRTK  +  +    + LP R I +    +  +E + Y+ +++ ++  FN  ++AGT++ +++ IF  + RLRQ   HP L    +  A                            + ++ N D                R    +  G C     +P  DP VTAC H  CK CL D+     +   P    SC     SR +   +   +     ++T L     +S  +   RI L           TS KI AL   I  +     + K +VFSQFTSFLDLI   L K+ I  V+L G+M   AR   +  F
Sbjct:  693 LFSVDFFRVILDEAHVIKNRRSKTARACYELRATHRWVLTGTPIVNRLEDLFSLVRFLQVEPWN-----------------------------NFSFWKTFITVPFESKDY----VRALNVVQ-TVLEPLVLRRTKTMKTPEGEPLVPLPRRTIDIVEVELSEQEREIYDYIFTRAKRTFNDNIEAGTLLKSFSTIFAQILRLRQTCCHPILTRNKTIVADEEDAAATADAANELKDDMDLQELIDRFSASMENADTAEAQDPSAKFTTHALRQIQTESSGECPICSEEPMIDPAVTACWHSACKKCLEDYIRHQTDKGVPPRCFSCRAPVTSRDIFQVIRHQSPSSTPTETDLYSSTPASSPHPAPRISLRRIHPLSPSAHTSAKIHAL---INHLNRVPANTKSVVFSQFTSFLDLIGAQLTKAGISYVRLDGTMPQKARAEVLAEF 1104          

HSP 2 Score: 85.1149 bits (209), Expect = 1.750e-15
Identity = 45/126 (35.71%), Postives = 76/126 (60.32%), Query Frame = 3
Query:  678 GGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQ----TAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQF------SEYDFVITTYSIVEAEYRKFMM 1025
            GGILADEMG+GKTI+ ++L+ + R V  +   P+ S++     + SS  LP    TLV+ P   +SQW SE  + + +G+ KVL+Y+G ++  N+++       +  + +IT+Y +V +E R+  M
Sbjct:  559 GGILADEMGLGKTIEMLSLIHSHRNVSPSRQGPSSSTELVRMPSSSSAILPAPNTTLVVAPTSLLSQWESEAMKASEQGTMKVLMYYGVDKSTNLQELCSAGNPAAPNIIITSYGVVLSESRQLAM 684          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_SCHPO (DNA repair protein rad8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rad8 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.265e-34
Identity = 115/430 (26.74%), Postives = 194/430 (45.12%), Query Frame = 3
Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV----VYSST------AAQRAGNIVNGDRNDDEQV-------------------CGI-CNDPAEDPVVTACAHVFCKACL---IDFSASLGNVS--CPSCSRLLTVD-----LTTNADGGQSSKTTLKGFKSS-SILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPD 2483
            L SV W R++LDE H +++R   TAKA  S+ S  +W ++GTP+ N++ +LYSL++F++  P+  Y                              +W  +V+ P   Y + ++ K   ++    IL+ +VLRRTK+ +  +    + LPP+ + +        E   Y+SLY+++++  N  + AGT+  NY  I  LL RLRQA   P L+    + S T      + ++  +++N      + +                   C I CN+P ++P++  C H  C  CL   I +      +   C +C +               +G QS  T L G +      NR+Q      S K+  L  ++R +       K ++FSQFT+FLD+I   L    +   +  G+MS   R  A+++F  DPD
Sbjct:  645 LFSVHWFRVVLDEGHNIRNRESKTAKACHSISSQNRWVITGTPIVNKLDDLYSLIKFMRYEPWCNY-----------------------------TYWQTFVSLP---YQSKDVLKALNVV--QSILEFLVLRRTKETKDRNGNSIVTLPPKTVKIEYLDFSDSERKIYDSLYTKAKSTVNANIVAGTLFRNYTTILGLLLRLRQACCDPVLLSNMTINSETFDDFEFSVEQFNSLINQFVVTGKPIPSDILKIDTLKSFEALITECPICCNEPIQNPLLLNCKHACCGDCLSEHIQYQKRRNIIPPLCHTCRQPFNEQDVYKPFFVKNNGTQS--TLLVGEEVKWKYWNRLQ------SVKLNGLLGQLRQLTHSSEPEKVVIFSQFTTFLDIIADVLESEKMGYARFDGTMSQQMRSTALETFRNDPD 1032          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: YBMA_SCHPO (Uncharacterized ATP-dependent helicase C582.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC582.10c PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.183e-33
Identity = 116/402 (28.86%), Postives = 173/402 (43.03%), Query Frame = 3
Query: 1320 KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKK---------GRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRN-----DDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQ--SSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTED 2477
            K  L +  W RIILDEAH +K++   +A A  +L+ + +W L+GTPLQN V ELYSLV+FL I P++            D S                  W   ++ P+       + KR  +LL       I+LRRTK          G    L L  R++       +  E D+Y +L    +   + +V +G +  NY +I  LL RLRQA +HP  + +       A N ++G  N      D+ V  + N   E   + +    FC  C+ +         C  CSR    +      G Q  + KT  K  K   IL  + L++ +    +  LR             K I+FSQFT+FLD+I   L K+ I  V+  G M+  AR+ ++     D
Sbjct:  370 KPSLFAFYWWRIILDEAHTIKNKSSKSALACCALQGINRWCLTGTPLQNNVDELYSLVKFLHINPFN------------DQSV-----------------WKDQISLPLCQGEENLVFKRLRMLLSV-----IMLRRTKTLLEANAGKDGTGGALKLSKRLVYKVICKFEESERDFYSNLARNMERTMSNFVNSGKLGKNYTNILCLLLRLRQACNHPQSLNFQFEQDVDAFNALDGAANTNKLASDQDVDDLAN-LLETVEIGSRKKSFCTICMAELPPDFHEKKCKDCSR----NFKELDKGIQDPNDKTLYKSSKIREILKILSLDEQEEDDTVRGLR-------------KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSD 719          

HSP 2 Score: 92.8189 bits (229), Expect = 5.587e-18
Identity = 62/168 (36.90%), Postives = 90/168 (53.57%), Query Frame = 3
Query:  609 IPLLRYQKEWLAWALKQE---DSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKE-KCPYCGKSFHQKKLSVHLKYY 1100
            I LL +Q + L W   +E    S+  GGILAD+MG+GKTIQ IAL+L+     H + +   S            I+ TLV+ P+  + QW SE+    ++     +VYHGA+R K +K   EYD VITTY I+ +E+        + K P   KS+ +KK S+   Y+
Sbjct:  231 IRLLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALILS-----HPLPKKKHS------------IKSTLVVAPLSLIKQWESEVQ---TKSKLTAIVYHGASRYKLLKVIHEYDVVITTYQILVSEWVSHNTTGTDGKSPTEAKSYEKKKPSLFAFYW 378          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_CANGA (DNA repair protein RAD5 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RAD5 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.157e-33
Identity = 110/438 (25.11%), Postives = 194/438 (44.29%), Query Frame = 3
Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQ----------------------------AVDHPYLVVYSSTAAQRAGNIVNGDRN-----------DDEQV----CGICN-DPAE--DPVVTACAHVFCKACLIDFSASLGNVS----CPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHK----SSIKCVQLVGSMSLAARDAAIKSF 2468
            + S+++ RIILDE H ++++   T+KAVL L S Y+W L+GTP+ NR+ +LYSLV+FL++ P+S                                +W +++  P +        K+A  ++ + I++ ++LRRTK+ +  D    + LPP+ I + +  +  K+   YE     ++  F + +Q+G ++  Y+ I   + RLRQ                            +VD   L+  +           N + +           D  Q+    C IC  +P E    VVT C HVFCK CL ++       S    CP+C R + ++     + G           S  IL  I  +  +   K+ AL   ++ + +     + +VFSQF+S+LD+++  L++    + +K  +  G +SL  R A ++ F
Sbjct:  651 IFSIEFFRIILDEGHTIRNKSTITSKAVLELSSKYRWILTGTPIINRLDDLYSLVKFLKLEPWS-----------------------------QIGYWKQFITNPFEERN----FKQAFDVV-NAIMEPVLLRRTKQMKDTDGNPLVQLPPKEIVIEKLQLSKKQKLIYEEFLQRAEKTFRSGLQSGDLLKKYSTILVHILRLRQVCCDSNLIGTLDENDEDLSSGNNKLITESVDVKTLIPDTEEEEDEVPPFENDELDKLIESVEAKFIDSNQLIPVECSICTAEPIESSSAVVTECEHVFCKECLEEYGNFQKEKSLQQKCPNCRRDINLNRCLAFEKG-----------SDGILKLIHFDRKERPAKLNALIRHLQQLQDSSAGEQVVVFSQFSSYLDILESQLNEVYSSNKLKVYKFDGRLSLKERTAVLEDF 1043          

HSP 2 Score: 70.0922 bits (170), Expect = 7.049e-11
Identity = 42/128 (32.81%), Postives = 69/128 (53.91%), Query Frame = 3
Query:  678 GGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAG-SSTDLPRI---------RCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGAN----RGKNVKQFSEYDFVITTYSIVEAEYRKF 1019
            GGIL+DEMG+GKTI A++LVL + +  HT  +     +++  SS D+  I         + TL+I P+  ++QW  E D+  +       +Y+G N    +   +K+ +    V+TTY IV+ E+ K 
Sbjct:  508 GGILSDEMGLGKTISALSLVLMRPKDEHTTSQSLFHQESSNLSSDDVIEIKEPERSYAYKTTLIIVPMSLLTQWRDEFDKVNNNAGLTCELYYGGNVSSLKSLLIKRKNPPTVVLTTYGIVQNEWTKL 635          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: YF2C_SCHPO (Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A2.12 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.099e-32
Identity = 119/447 (26.62%), Postives = 196/447 (43.85%), Query Frame = 3
Query: 1311 PEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKY---VATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLA---LPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSST----AAQRAGNIVNGDRNDD----EQV-------CGICNDPAEDPV-VTACAHVFCKACLIDF--------SASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSI----------------LNRI----------QLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPD 2483
            P   SLL +  W RI+LDEAH +++R    AK  + L++ Y+W LSGTP+QN + E YSL++FL+I PY                                C W+ +   ++ P++ Y   +I + A+  L+  +L + V RRTK+ R  +L    LPP+ I      +  +E   Y    S +Q+  + Y      ++ Y  +   L RLRQ   HP+LV  SS       + + N+ N  ++ D    E++       C +C DP   PV +  C H  C+ C+           S S     CP C   +  D   +A   Q+    L   K   +                 NRI          + +++++S+K+   R+ I  ++    + K +V+SQF+ +L L+ + L   +I+ V+  G+MS   R  ++ SF  D D
Sbjct:  381 PPACSLLET-SWYRIVLDEAHTIRNRDTLAAKCCVKLDAKYRWCLSGTPIQNHIDEFYSLLKFLRIKPY--------------------------------CVWSLFAKDISRPLKSY-RADIVEAALKRLR-ILLASTVFRRTKETRVNNLPIVNLPPKTIRTVSVNLLPEERALYNEQMSSAQSLVDNYFNNDHDLSRYGFLLVSLLRLRQFCCHPWLVKSSSLDNSFRIRDSENVRNACKSLDPLTIERIATLQDFNCSVCLDPCLAPVFIIPCGHFTCQECMSMLVGQKYGSSSTSTIIAKCPMCRGNIVQDSLVDATILQAIHGPLNSLKQLELDMNQSFSEQESIKLRWENRIDQMFTKKFGKRASEWKSSSKLNQARQTILDIIGSKRNEKILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNNDKD 792          

HSP 2 Score: 75.8702 bits (185), Expect = 1.159e-12
Identity = 50/160 (31.25%), Postives = 83/160 (51.88%), Query Frame = 3
Query:  546 VDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEID-RFTSRGSTKVLVYHGANRGKNVKQF--SEYDFVITTYSIVEAEYRK 1016
            +DL  +N  +      S+ L++ LL +Q E  AW    E S+  GG++AD+MG+GKTIQ IAL+L ++                  S D P  +  L++  V  + QW  E+  +        V ++HG+ + KN+  +  S+YD V+TTYS++  E ++
Sbjct:  232 IDLQLKNEQV-----QSAGLLVSLLPHQVEGHAWMESMEQSSKCGGVMADDMGLGKTIQTIALLLTQK------------------SQD-PLRKTNLIVVSVALLHQWAEELSTKVHPSKKLSVYIHHGSTK-KNLDSYELSQYDVVLTTYSMLAYEMKQ 366          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_CANAL (DNA repair protein RAD5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RAD5 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.969e-30
Identity = 109/432 (25.23%), Postives = 189/432 (43.75%), Query Frame = 3
Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRT---KKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDD----------------------------------EQVCGICND---PAEDPVVTACAHVFCKACL---IDFSASLGNVS-CPSC----SRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCV--QLVGSMSLAARDAAIKSFTE 2474
            L+SVK+ RIILDE H +++R   TAK+V  L+S  KW L+GTP+ NR+ +LYSL +FL++ P++                             +F +W  +V  P +     +I +   ++    IL+ I LRRT   KK     + LP + + + +   +  E   Y+     + A F   +++G ++  Y  I   + RLRQ   H  L+     A +    I+  ++++D                                  E  C IC     P  + VVT CAH FC +C+   +DF   L     CP+C    S+     +      G   +   +             +  ++S+KI+AL   ++ +  +  ++K IVFSQF+S+LD+I+  L  +S + +  +  G +++  R   ++SF +
Sbjct:  583 LYSVKFFRIILDEGHNIRNRNTKTAKSVYELQSSRKWILTGTPIVNRLDDLYSLTKFLELDPWN-----------------------------NFSYWKTFVTLPFEQ---KKISQTLDVV--KSILEPIFLRRTKSQKKNGKPLVELPAKEVVIEQIKFNDDEEKLYQWFKDRAYASFAEGIKSGQLLRRYTQILTHILRLRQVCCHVDLI---GGAHEMDDEIIEAEQDEDMRKFLTSIKENQIRFANDTDVKEKMYNLYGKIKEENECSICTQVPIPYSEMVVTPCAHTFCLSCILEHLDFQKELKKEKLCPNCRSPISKYQLFRIRNQPTKGNEIRFHTQKDAPDYSFQLYLYDPNRSSSKIQALVRHLKALHSQSPNSKVIVFSQFSSYLDIIQSELKLASEEFIVFKFDGRLNMNDRTKLLESFNQ 977          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_YEAST (DNA repair protein RAD5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD5 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.134e-30
Identity = 112/443 (25.28%), Postives = 198/443 (44.70%), Query Frame = 3
Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV----------------VYSSTAAQRAGNIVNGDRNDD----EQV---------------------CGICNDPAED---PVVTACAHVFCKACLIDF-----SASLGNVSCPSCS------RLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIK----YSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468
            L SV + RII+DE H +++R   T+KAV++L+   KW L+GTP+ NR+ +LYSLV+FL++ P+                             R   +W  +V+TP +        K+A  ++ + IL+ ++LRRTK+ +  D    + LPP+ + ++R      +   Y+ L  +++    + +  G ++  Y+ I   + RLRQ   HP L+                V   T    +   V  +R D+    E++                     C IC     D    + T C H FC+ CL ++     S +LG + CP+C       RLL + + TN++   S     K +  +S            S+KI AL +E++ + +     + ++FSQF+++LD+++    ++  K   K  +  G +SL  R + +  F
Sbjct:  670 LFSVNFYRIIIDEGHNIRNRTTVTSKAVMALQGKCKWVLTGTPIINRLDDLYSLVKFLELDPW-----------------------------RQINYWKTFVSTPFESKNY----KQAFDVV-NAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQDLLYKFLLDKAEVSVKSGIARGDLLKKYSTILVHILRLRQVCCHPGLIGSQDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQSLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLG-LKCPNCRNQIDACRLLAL-VQTNSN---SKNLEFKPYSPAS-----------KSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADF 1062          

HSP 2 Score: 56.9954 bits (136), Expect = 7.565e-7
Identity = 38/128 (29.69%), Postives = 62/128 (48.44%), Query Frame = 3
Query:  675 KGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRI----------RCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGAN----RGKNVKQFSEYDFVITTYSIVEAEYRK 1016
            KGGIL+DEMG+GKT+ A +LVL+       + +     +    S +LP            + TL++ P+  ++QW +E  +  +       VY+G N    +    K  +    V+TTY IV+ E+ K
Sbjct:  526 KGGILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIENTAVSDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKTLLTKTKTPPTVVLTTYGIVQNEWTK 653          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A068URB3_COFCA0.000e+066.96Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
K4C0N1_SOLLC0.000e+059.95Uncharacterized protein OS=Solanum lycopersicum GN... [more]
V7BY35_PHAVU0.000e+068.36Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
G7JEP7_MEDTR0.000e+069.39RING/U-box helicase OS=Medicago truncatula GN=MTR_... [more]
K4D0D1_SOLLC0.000e+066.37Uncharacterized protein OS=Solanum lycopersicum GN... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RAD5_CRYNJ8.276e-3827.23DNA repair protein RAD5 OS=Cryptococcus neoformans... [more]
RAD5_NEUCR2.095e-3727.71DNA repair protein rad5 OS=Neurospora crassa (stra... [more]
YG42_SCHPO9.474e-3729.00Uncharacterized ATP-dependent helicase C23E6.02 OS... [more]
RAD5_ASPFU4.818e-3627.84DNA repair protein rad5 OS=Neosartorya fumigata (s... [more]
RAD5_SCHPO1.265e-3426.74DNA repair protein rad8 OS=Schizosaccharomyces pom... [more]
YBMA_SCHPO6.183e-3328.86Uncharacterized ATP-dependent helicase C582.10c OS... [more]
RAD5_CANGA7.157e-3325.11DNA repair protein RAD5 OS=Candida glabrata (strai... [more]
YF2C_SCHPO2.099e-3226.62Uncharacterized ATP-dependent helicase C17A2.12 OS... [more]
RAD5_CANAL1.969e-3025.23DNA repair protein RAD5 OS=Candida albicans (strai... [more]
RAD5_YEAST2.134e-3025.28DNA repair protein RAD5 OS=Saccharomyces cerevisia... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 633..672
e-value: 1.7E-6
score: 37.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 633..673
score: 12.106
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 158..478
e-value: 6.0E-28
score: 108.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 175..460
score: 15.162
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 158..290
e-value: 1.0E-29
score: 102.7
coord: 398..462
e-value: 1.0E-29
score: 102.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 711..781
e-value: 9.4E-5
score: 21.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 123..292
coord: 397..462
coord: 492..533
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 707..785
coord: 535..645
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 625..679
e-value: 7.1E-13
score: 47.4
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 633..672
e-value: 1.3E-7
score: 31.2
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 497..609
coord: 4..19
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 397..467
NoneNo IPR availablePANTHERPTHR10799:SF763SUBFAMILY NOT NAMEDcoord: 4..19
NoneNo IPR availablePANTHERPTHR10799:SF763SUBFAMILY NOT NAMEDcoord: 97..292
coord: 397..467
NoneNo IPR availablePANTHERPTHR10799:SF763SUBFAMILY NOT NAMEDcoord: 648..672
coord: 706..786
NoneNo IPR availablePANTHERPTHR10799:SF763SUBFAMILY NOT NAMEDcoord: 497..609
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 648..672
coord: 97..292
coord: 706..786
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 628..677
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 177..463
e-value: 3.6E-47
score: 160.6
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 648..657

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0000197 ID=g.arboreum_cottongen_reftransV1_0000197; Name=g.arboreum_cottongen_reftransV1_0000197; organism=Gossypium arboreum; type=contig; length=2490bp
CAAGTCAACAATTACAACACCCCACATTCCCGCCGCCCAATCACCTATTT
CTTTCTCTCTCACTGATCATTCGTCTTCATTCAATCGGGAACTAAACGTC
AAATTCACTCCATTTACATCCTCCTTCCCAAATGCAGCTTCGATCGCGTA
AAAGGACCTCCAACTTCTCTACCAATGAAGAACACAGCGATAGTTCTGAC
CAAGCCGATAATTTTATCCAGTTGGATGATCTCTCCGATTCAGAAACCTA
TGTCCGTTCCTCCGATTCTGATCTAGGGGAAGAGGAGATTCTGGACTTAA
ACCATAAAGCAGTGAAAGCTGCTCCTATCACCATTTCTGATTTTACCGAG
CCTCCAACAAACAGAGGCAATGGTGAACAGATACTATCTGAGCAAAATGA
AAGCCAGTTTGACTTTAATGTGTCAACCGCGAAGAAGAGAAACAATACAA
AAAGGAAAAAGAAGGCTAGGTCTGGGCAACCGTTAATGTGGGAAGTTTGG
GAACAAGAGCATGAGAAATGGATTGATGAGAATTTGACGGTAGATGTTGA
TCTTGATCAACAGAATGCGGTAATAACTGAGACTTCTGACGCATCATCCG
ACTTAATTATTCCTTTGTTGAGGTACCAAAAGGAATGGTTGGCCTGGGCT
CTGAAACAGGAAGACTCAAATACCAAAGGGGGAATCCTTGCAGATGAGAT
GGGAATGGGGAAGACCATTCAAGCGATAGCCCTTGTCCTTGCCAAACGTC
AAGTACTCCATACAATTGGTGAACCCAATGTTTCGTCACAGACTGCAGGT
TCATCAACAGATTTGCCCAGGATAAGATGCACCCTTGTTATTTGTCCGGT
TGTTGCGGTGAGTCAGTGGGTAAGTGAGATTGATCGGTTTACTTCAAGGG
GAAGCACCAAGGTGTTGGTTTACCATGGTGCCAATAGAGGGAAAAATGTG
AAACAGTTCTCAGAATATGATTTTGTAATAACAACATATTCGATTGTTGA
GGCTGAATATAGGAAATTCATGATGCCACCAAAGGAGAAATGCCCTTACT
GTGGGAAGTCATTTCACCAAAAGAAGCTCTCCGTTCACTTGAAATATTAT
TGTGGGCCTGATGCTATTAAAACAGAAAACCAATCTAAGCAAGAGAGAAA
GAAACCAAAATCTATGTTCAAGTCAGGCAAAAAACATGCTAGTAATTATG
AAGCTGATTCCAGAAAGAGGGCTAGCAAGAAGAAAGCAAAGCATAATAAG
GAAGACAAAGACAGAGACTTTGAGTTTGATGAAACTTCTGCAGGCAAAGA
ACATAACTTGCCTGAGGGAAAATCACTTCTACACTCTGTGAAGTGGGAGC
GCATCATCTTGGATGAGGCTCATTTTGTGAAAGATAGACGTTGTAATACT
GCAAAGGCTGTCCTTTCTTTGGAATCCTTATACAAATGGGCTTTGAGTGG
CACTCCACTGCAGAATCGTGTTGGAGAACTGTACTCTTTGGTTCGCTTCT
TGCAAATAGTTCCATACTCCTATTACTTGTGCAAAGATTGTGACTGCAAA
ACTCTTGATTATAGTTCATCAACACAATGCCCAAAGTGCCCCCATAATTC
TGTGAGGCATTTTTGTTGGTGGAATAAGTATGTGGCTACGCCAATACAAC
ATTATGGAAATGGTGAGATCGGGAAAAGAGCTATGATATTGCTAAAACAC
AAAATTTTGAAGAACATTGTCCTAAGGCGTACCAAGAAAGGCAGGGCTGC
TGATCTTGCTCTTCCTCCTAGAATTATTTCCTTGAGACGGGACACCATGG
ACATTAAAGAAACTGACTATTATGAATCTTTGTACAGTGAAAGTCAGGCA
CAATTTAACACATATGTTCAAGCAGGAACTGTAATGAACAATTATGCTCA
CATTTTTGACCTCCTCACACGCTTGCGGCAGGCTGTTGATCACCCTTACC
TTGTAGTATATTCGAGTACTGCTGCACAAAGAGCTGGAAACATAGTCAAT
GGTGATAGGAATGATGATGAACAAGTTTGTGGCATTTGCAATGATCCTGC
AGAAGATCCAGTGGTTACTGCATGTGCACATGTCTTCTGCAAAGCTTGTC
TGATTGATTTTTCTGCCTCCCTGGGAAATGTCTCATGCCCCTCATGCTCA
AGATTACTTACTGTTGATCTGACTACGAATGCAGATGGAGGGCAATCTAG
CAAAACAACACTGAAGGGGTTTAAATCCTCAAGTATTCTGAACAGAATTC
AATTAAATGATTTTCAGACGAGCACTAAAATAGAGGCTTTGAGGGAAGAA
ATCAGATTCATGGTGGAAAGAGATGGTTCTGCGAAGGGAATTGTTTTCAG
CCAATTCACATCTTTCTTGGATCTCATAAAATACTCCCTTCATAAGTCCA
GCATAAAATGTGTTCAACTAGTAGGGAGCATGTCCTTGGCTGCGAGAGAT
GCTGCAATTAAGAGTTTTACTGAGGATCCAGATTGCAAGA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR013083Znf_RING/FYVE/PHD
IPR000330SNF2_N
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0005524ATP binding