g.arboreum_cottongen_reftransV1_0000197, g.arboreum_cottongen_reftransV1_0000197 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0000197
Unique Nameg.arboreum_cottongen_reftransV1_0000197
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length2490
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr6chromosomeg.arboreum_cottongen_reftransV1_0000197:1..2490 .
Chr6:95626..102793 -
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A061EBD2_THECC (Helicase protein with RING/U-box domain isoform 5 OS=Theobroma cacao GN=TCM_011915 PE=4 SV=1)

HSP 1 Score: 1190.25 bits (3078), Expect = 0.000e+0
Identity = 615/696 (88.36%), Postives = 645/696 (92.67%), Query Frame = 3
Query:  321 APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXX-XRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSS 2402
            APIT+SDF EP TNR N EQ  +EQNE  +DF VS+ KKRNN KRKKK ARSG  LMWEVWEQEHEKWIDENLT DVDLDQQNAVITETS+AS DLIIPLLRYQKEWLAWALKQEDS TKGGILADEMGMGKTIQAIALVLAKR++L TI EPN SS T  SSTDLP IR TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHG NRGKN+KQF +YDFVITTYSIVEAEYRK+MMPPKEKCPYCGKSF+QKKLSVHLKYYCGPDA+KTE QSKQERKK KS+FKS ++H SNYE D RK A KKK+KHN+EDKD DFEFD+T AG EH+LP+GKSLLHSVKWERIILDEAHFVKDRRCNTAKAVL+LESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQC  CPHNSVRHFCWWNKYVATPIQ  GNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRI+SLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTA+QRAG+IVN D+N+DEQVCGIC+DP E+PVVTACAHVFCKACLIDFSASLG VSCPSCSRLLTVDLTT AD GGQSS+TTLKGFKSSSILNRIQLNDFQTSTKIEALREEI  MVERDGSAKGIVFSQFTSFLDLI YSLHK S
Sbjct:   12 APITVSDFAEPSTNRSNAEQQSTEQNEGDYDFYVSSRKKRNNVKRKKKKARSGPLLMWEVWEQEHEKWIDENLTADVDLDQQNAVITETSEASPDLIIPLLRYQKEWLAWALKQEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSSTDLPMIRGTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAEYRKYMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQERKKSKSVFKSDREHTSNYETDMRKGAGKKKSKHNEEDKDLDFEFDDTFAGVEHSLPQGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCGICHDPTEEPVVTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSILNRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSLHKVS 707          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2REN7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1)

HSP 1 Score: 1122.07 bits (2901), Expect = 0.000e+0
Identity = 593/601 (98.67%), Postives = 595/601 (99.00%), Query Frame = 3
Query:  132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQA 1934
            MQLRSRKRTSNFS NEEHSDSSDQADNFIQLDDLSDSETYV SSDSDLGEEEILDLNHKAVK APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQ 
Sbjct:    1 MQLRSRKRTSNFSANEEHSDSSDQADNFIQLDDLSDSETYVPSSDSDLGEEEILDLNHKAVKPAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQV 601          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: F6HIC3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g00800 PE=4 SV=1)

HSP 1 Score: 1014.6 bits (2622), Expect = 0.000e+0
Identity = 497/674 (73.74%), Postives = 565/674 (83.83%), Query Frame = 3
Query:  483 LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASN----YXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            LMWE+WE+EH+KWID NLT DVDLD QN +++ET+DA SDLI+PLLRYQKEWLAWALKQE+S T+GGILADEMGMGKTIQAIALVL+KR++   I EP V  +  GSS DLP+I+ TLVICPVVAV QWV+EI RFT +GSTKVLVYHGANRGK++ QFSEYDFVITTYSIVEAEYRK +MPPK+KC +C K F+  K+S+HL+Y+CGPDAIKT+ QSKQ++K+PK   K       N         +K   K +  +  +         E SA  E +    KS+LHSVKW+RIILDEAHF+KDRR NTAKAVL+LES YKWALSGTPLQNRVGELYSL+RFL+I+PYSYYLCKDCDC+TLDYSSST+CP C H SVRHFCWWNKYVATPIQ  GN   G+RAMILLKHKILK+I+LRRTKKGRAADLALPPRI+SLRRDT+DIKE DYY+SLY+ESQAQFNTYV+AGT+MNNYAHIFDLLTRLRQAVDHPYLVVYS T+  RAGNIV  D  + EQVCGICNDP EDPVVT+CAHVFCKACL DFS +LG VSCPSCS+ LTVDLTT+ D G +  KTT+KGFK SSILNRI+L+DFQTSTKI+ALREEIRFMVERDGSAKGIVFSQFTSFLDLI YSL KS I CVQLVGSMS+AARDAAI  FT +PDCK
Sbjct:  165 LMWEIWEEEHDKWIDMNLTEDVDLDHQNELVSETADAPSDLIMPLLRYQKEWLAWALKQEESTTRGGILADEMGMGKTIQAIALVLSKREISQKICEPKVVLRAPGSSMDLPKIKGTLVICPVVAVLQWVNEIGRFTVKGSTKVLVYHGANRGKSIGQFSEYDFVITTYSIVEAEYRKNVMPPKQKCVFCRKLFYPHKMSIHLRYFCGPDAIKTDKQSKQKKKEPKLELKISDSVEDNGGECEGEKRKKDQPKPRKNYKPKKHMGFGPSIENSAVDEQSTSTRKSILHSVKWDRIILDEAHFIKDRRSNTAKAVLALESEYKWALSGTPLQNRVGELYSLIRFLRIIPYSYYLCKDCDCRTLDYSSSTECPNCEHKSVRHFCWWNKYVATPIQAMGNIGEGQRAMILLKHKILKSILLRRTKKGRAADLALPPRIVSLRRDTLDIKEEDYYQSLYNESQAQFNTYVEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSRTSTLRAGNIV--DTENGEQVCGICNDPLEDPVVTSCAHVFCKACLNDFSTTLGQVSCPSCSKPLTVDLTTSMDPGDRDMKTTIKGFKPSSILNRIRLDDFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLQKSGITCVQLVGSMSMAARDAAISRFTNEPDCK 836          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: B9SFQ7_RICCO (DNA repair helicase rad5,16, putative OS=Ricinus communis GN=RCOM_1224050 PE=4 SV=1)

HSP 1 Score: 1011.52 bits (2614), Expect = 0.000e+0
Identity = 503/790 (63.67%), Postives = 603/790 (76.33%), Query Frame = 3
Query:  132 MQLRSRKRTSN--FSTNEEHSDSSDQADNFIQLDD-LSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGG-QSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            M+LRSRK+          E +D ++  DN +  +D  SD E Y+ SS+ +  E+ +L         + +  S     P    NG+ ++   N  Q +      +++      K+ R+   L+W++WE+E+E+WID++LT DVD+D Q+ ++TET++  ++LI+PLLRYQKEWLAWALKQE+S+TKGGILADEMGMGKTIQAIALVLAKR++L    E N ++   GSS D   I+ TLV+CPVVAV+QWV EIDRFT+ GSTKVLVYHGANR K+ K F  +DFVITTYS VEAE+RK+MMPPK+KC YCGKSF++ KL+ HLKY+CGPDA +T  QSKQ+RKK K+         +           +           R        +  E  L + KS+LHS+KW+RIILDEAH+VKD+RCNTAKA+ +LES YKWALSGTPLQNRVGELYSLVRFLQIVPYS+YLCKDCDC+ LDY  STQC  CPH+SVRHFCWWNKYVA PIQ YG  +IGKRAM+LL HK+L+NIVLRRTKKGRAADLALPPR++ LRRDT+D+KE DYY+SLY+ESQAQFNTYVQAGT+MNNYAHIFDLLTRLRQAVDHPYLVVYS T  QR GN+ +    D+EQVC IC+DPAEDPVVT+C+HVFCKACL+DFSASLG VSCP+C  LLTVDLTT  D G Q++KTT+ GFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI YSLHKS I CVQLVGSMSL ARD AIK F+EDP+CK
Sbjct:    1 MELRSRKKLPKPLIGNEREETDGNEVEDNKLYTNDGHSDDELYIVSSNDESEEDSVLASTDADNAESSMKRSMGEAEP---DNGQPVVQLPNAPQINI---VQERKKRRYSSKRKRNKVILLWKIWEEENERWIDDHLTEDVDIDHQHGIVTETAEPPAELIMPLLRYQKEWLAWALKQEESSTKGGILADEMGMGKTIQAIALVLAKREILRQNRESNGATLLPGSSIDPSGIKPTLVVCPVVAVTQWVKEIDRFTTEGSTKVLVYHGANREKSSKHFLGFDFVITTYSTVEAEFRKYMMPPKDKCAYCGKSFYENKLATHLKYFCGPDAFRTAKQSKQDRKKLKTS-------PTEKARSDESPKIQDDVDVISGRTYRKRHAAMEISEVELALRKEKSVLHSMKWDRIILDEAHYVKDKRCNTAKAIFALESSYKWALSGTPLQNRVGELYSLVRFLQIVPYSFYLCKDCDCRILDYRPSTQCSSCPHSSVRHFCWWNKYVAKPIQGYGTKDIGKRAMLLLTHKVLRNIVLRRTKKGRAADLALPPRMVMLRRDTLDVKEEDYYQSLYNESQAQFNTYVQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSKTPPQRGGNLFD---TDNEQVCDICHDPAEDPVVTSCSHVFCKACLLDFSASLGRVSCPTCYSLLTVDLTTKTDAGDQTAKTTIMGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLISYSLHKSGINCVQLVGSMSLPARDNAIKRFSEDPNCK 774          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: M5X3R4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001451mg PE=4 SV=1)

HSP 1 Score: 995.727 bits (2573), Expect = 0.000e+0
Identity = 511/789 (64.77%), Postives = 593/789 (75.16%), Query Frame = 3
Query:  132 MQLRSRKRTSNFST--NEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGG-QSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            M+LRSRKR +  ST  NE+H +  D     I+  + SD +TY+ S+ S                                       S+  E + D+      K+   K  K   + Q L W +WE+EH+KWID+N+T D DL+ QN VI+E S+A SDLI+PLLRYQKEWLAWALKQE+S T+GGILADEMGMGKTIQAIALVLAKR++  T  EP       GSST  P I+ TLV+CPVVAVSQWV+EI+RFTS+GSTKVLVYHGANR K+ KQFSEYDFVITTYSIVEA+YRK +MPPK+KC YCGK FH+K+LSVHLKY+CGP A +TE QSKQ+RKK          H  +    + +    KK   +++      + D  S          KS+LH+VKW RIILDEAH++K RRCNTA+AVL+LES YKWALSGTPLQNRVGELYSLVRFLQ+VPYSYYLCKDCDC  LD+SSST C  CPHNSVRHFCWWNKYVATPIQ YGN   GKRAM+LLK KILKNIVLRRTKKGRAADLALPPRI+SLRRDT+DIKE DYYESLY++SQA FNTYV  GTVMNNYAHIFDLLTRLRQ+VDHPYLVVYS+TAA R    VN D N  EQVCGIC++PAED VVT C H FCKACL DFSAS G VSCP+CS++LTVD TTN D   Q++KTT+KGF+SSSI+NRIQL++FQTSTKIEALREEIR MVE+DGSAKGIVFSQFT+FLDLI YSL KS IKCVQLVGSM+++ARD AIK+FTEDPDC+
Sbjct:    1 MELRSRKRVAGPSTDGNEKHEEEED----IIRGTESSDEDTYLPSTSS--------------------------------------ASDSEEVEIDY--FGLHKKKKKKSSKDREAKQRLKWNIWEEEHDKWIDDNVTEDFDLENQNNVISEVSEAPSDLIMPLLRYQKEWLAWALKQEESETRGGILADEMGMGKTIQAIALVLAKREINWTFNEP-------GSSTSFPGIKGTLVVCPVVAVSQWVNEIERFTSKGSTKVLVYHGANREKSSKQFSEYDFVITTYSIVEADYRKNVMPPKQKCHYCGKLFHEKRLSVHLKYFCGPHAFRTEKQSKQQRKK----------HLQSIPQKTFEPVKDKKHGGSRKRSKLHKDNDMDSEDVGQGFSRAKSVLHAVKWNRIILDEAHYIKSRRCNTARAVLALESSYKWALSGTPLQNRVGELYSLVRFLQLVPYSYYLCKDCDCINLDHSSSTHCSNCPHNSVRHFCWWNKYVATPIQLYGNQFRGKRAMLLLKQKILKNIVLRRTKKGRAADLALPPRIVSLRRDTLDIKEQDYYESLYNDSQALFNTYVNDGTVMNNYAHIFDLLTRLRQSVDHPYLVVYSATAALRNEGRVNNDIN--EQVCGICHEPAEDAVVTTCQHAFCKACLTDFSASFGQVSCPTCSKVLTVDFTTNLDAANQTTKTTIKGFRSSSIMNRIQLDNFQTSTKIEALREEIRCMVEKDGSAKGIVFSQFTAFLDLINYSLQKSGIKCVQLVGSMTMSARDNAIKTFTEDPDCR 726          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A067JT95_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01831 PE=4 SV=1)

HSP 1 Score: 986.097 bits (2548), Expect = 0.000e+0
Identity = 475/669 (71.00%), Postives = 549/669 (82.06%), Query Frame = 3
Query:  483 LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            LMWE+WE+EH++WIDE+LT D+DLD Q+ ++ ET++  S+LI+ LLRYQKEWLAWALKQE+S TKGGILADEMGMGKTIQAIALVLAKR++L    E N ++   G S      + TLV+CPVVAVSQWVSEI RFT +GSTKVLVYHGANR K+ K F +YDFV+TTYS VEAE+RK+MMPPK+KC YCGKSF+  KLS+HLKY+CGP AI+T  QSKQ+RKK K+   +  +    Y A         + K  K+    +   D      +  L   KS+LHSVKW+RIILDEAH+VKDRR NTAKA+ SLES YKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDY SS QC  C H+ VRHFCWWNKY++ PIQ YG  +IGKRAMILLK K+L+NIVLRRTKK RA+DLALPPR+++LRRD++D++E DYY SLY+ESQAQFNTYV AGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS TAAQ+  N+V    ++ EQVCGIC+DPAEDPV T+C+HVFCK CL+DFS  +G VSCP+CSRLLTVDLTT  D GQ++KTT+KGFKSSSILNRI L+DFQTSTKIEALREEIR MVERDGSAKGIVFSQFTSFLDLI YSLHKS + CVQLVGSMSL ARDAAIK FTEDPDCK
Sbjct:  144 LMWEIWEEEHDRWIDEHLTEDIDLDNQHGMLAETAEPPSELIVNLLRYQKEWLAWALKQEESATKGGILADEMGMGKTIQAIALVLAKREILRKTSEANGATFLPGPSKS-SGTKSTLVVCPVVAVSQWVSEIGRFTKKGSTKVLVYHGANREKSFKNFYDYDFVMTTYSTVEAEFRKYMMPPKKKCAYCGKSFYDNKLSIHLKYFCGPKAIRTAKQSKQDRKKQKTAPLTSMQKTEPYHASQGDARKGAQKKKWKQHDSGNDIEDMEDWEVKQPLLREKSILHSVKWDRIILDEAHYVKDRRSNTAKAIFSLESSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYRSSAQCLGCNHSFVRHFCWWNKYISNPIQSYGALDIGKRAMILLKQKVLRNIVLRRTKKSRASDLALPPRVVTLRRDSLDVREEDYYHSLYNESQAQFNTYVTAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTAAQKGENLVEA--HNVEQVCGICHDPAEDPVATSCSHVFCKDCLLDFSTHMGQVSCPTCSRLLTVDLTTKMDSGQTAKTTIKGFKSSSILNRINLDDFQTSTKIEALREEIRCMVERDGSAKGIVFSQFTSFLDLISYSLHKSGVNCVQLVGSMSLPARDAAIKKFTEDPDCK 809          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A058ZZU3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00791 PE=4 SV=1)

HSP 1 Score: 970.689 bits (2508), Expect = 0.000e+0
Identity = 500/816 (61.27%), Postives = 603/816 (73.90%), Query Frame = 3
Query:  132 MQLRSRKRTSNFSTN----------EEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEE--------EILDLNHKAVKAAPITIS--------DFTEPPTNRG--NGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEP-NVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            M+LRSR+   N S +          E   D  + +D+ I     +D + YV  SD ++           E+ D    + K A +           D  E     G  +G+  ++E  +   D     A+     ++ +K R G PL+WE+WE+EHEKWIDEN T D+DLD QN V+TET +ASSDLI  LLRYQKEWLAWALKQE+S TKGGILADEMGMGKT+QAIALVLAKR+++ +IG   +  S +AGSST LP IR TLVICPVVAV+QWV EI+  T++GSTKVLVYHGANRGK   QF  +DFV+TTYS+VE EYRKF+MPPK+KC YCGK  +++K++VHL+Y+CGP A+KT  QSKQE+KK K   + G+  ++                             +    + H +  GKSLLHSVKWERIILDEAHFVKDRRCNTAKAVL+LES Y+WALSGTPLQNRVGELYSLVRFL+IVPYS+YLC+DCDC+TLDYSSS QC  C H+SVRHFCWWN+Y+A PIQ +GN +  KRAMILLKHKILK+I+LRRTKK RAADLALPPRII+LRRDT+DI+E DYY SLY+ESQ+QFNTYV+AGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS +AA R+G +V  D     Q CG+C++PAEDPVVT+C HVFCKACL+DFS + G +SCPSCS+ +T+DL++ +D G  SSK+T+KGFKS+SILNRIQLN+FQTSTKIEALREEIRFM+ERDGSAKGIVFSQF SFLDLI YSL KS I CVQLVG M++ ARD AIK FT DP CK
Sbjct:    1 MRLRSREVRPNPSADCPNVFVEDDSERECDGQEDSDSVIGGSRGADEDMYVPFSDFEMSGGGGGSSSDGEVADSGKHSAKKARVVPDLEMEDASHDLEEVILEGGEIDGDTQINEIAQQLADMRNIGARGSRRKRKGRKKREGPPLLWEIWEEEHEKWIDENSTEDIDLDNQN-VVTETVEASSDLIRELLRYQKEWLAWALKQEESATKGGILADEMGMGKTLQAIALVLAKREIIRSIGTGLDWCSPSAGSSTSLPEIRGTLVICPVVAVTQWVGEINCSTAQGSTKVLVYHGANRGKTADQFKNFDFVVTTYSLVEGEYRKFVMPPKKKCIYCGKLLYKEKMTVHLRYFCGPHAVKTTKQSKQEKKKGKQATQRGEIEST------------------------VESISDLEDDQSHRV--GKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVRFLRIVPYSFYLCQDCDCRTLDYSSSKQCADCSHSSVRHFCWWNRYIANPIQAHGNADGRKRAMILLKHKILKSILLRRTKKERAADLALPPRIITLRRDTLDIREEDYYTSLYNESQSQFNTYVEAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKSAALRSGVMVEPDTG--VQPCGVCHEPAEDPVVTSCVHVFCKACLLDFSTASGQLSCPSCSKPVTLDLSSKSDVGNNSSKSTIKGFKSASILNRIQLNEFQTSTKIEALREEIRFMIERDGSAKGIVFSQFASFLDLINYSLQKSGINCVQLVGDMTINARDGAIKKFTVDPYCK 787          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A058ZZM1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00791 PE=4 SV=1)

HSP 1 Score: 969.918 bits (2506), Expect = 0.000e+0
Identity = 500/816 (61.27%), Postives = 603/816 (73.90%), Query Frame = 3
Query:  132 MQLRSRKRTSNFSTN----------EEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEE--------EILDLNHKAVKAAPITIS--------DFTEPPTNRG--NGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEP-NVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            M+LRSR+   N S +          E   D  + +D+ I     +D + YV  SD ++           E+ D    + K A +           D  E     G  +G+  ++E  +   D     A+     ++ +K R G PL+WE+WE+EHEKWIDEN T D+DLD QN V+TET +ASSDLI  LLRYQKEWLAWALKQE+S TKGGILADEMGMGKT+QAIALVLAKR+++ +IG   +  S +AGSST LP IR TLVICPVVAV+QWV EI+  T++GSTKVLVYHGANRGK   QF  +DFV+TTYS+VE EYRKF+MPPK+KC YCGK  +++K++VHL+Y+CGP A+KT  QSKQE+KK K   + G+  ++                             +    + H +  GKSLLHSVKWERIILDEAHFVKDRRCNTAKAVL+LES Y+WALSGTPLQNRVGELYSLVRFL+IVPYS+YLC+DCDC+TLDYSSS QC  C H+SVRHFCWWN+Y+A PIQ +GN +  KRAMILLKHKILK+I+LRRTKK RAADLALPPRII+LRRDT+DI+E DYY SLY+ESQ+QFNTYV+AGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS +AA R+G +V  D     Q CG+C++PAEDPVVT+C HVFCKACL+DFS + G +SCPSCS+ +T+DL++ +D G  SSK+T+KGFKS+SILNRIQLN+FQTSTKIEALREEIRFM+ERDGSAKGIVFSQF SFLDLI YSL KS I CVQLVG M++ ARD AIK FT DP CK
Sbjct:    1 MRLRSREVRPNPSADCPNVFVEDDSERECDGQEDSDSVIGGSRGADEDMYVPFSDFEMSGGGGGSSSDGEVADSGKHSAKKARVVPDLEMEDASHDLEEVILEGGEIDGDTQINEIAQQLADMRNIGARGSRRKRKGRKKREGPPLLWEIWEEEHEKWIDENSTEDIDLDNQN-VVTETVEASSDLIRELLRYQKEWLAWALKQEESATKGGILADEMGMGKTLQAIALVLAKREIIRSIGTGLDWCSPSAGSSTSLPEIRGTLVICPVVAVTQWVGEINCSTAQGSTKVLVYHGANRGKTADQFKNFDFVVTTYSLVEGEYRKFVMPPKKKCIYCGKLLYKEKMTVHLRYFCGPHAVKTTKQSKQEKKKGKQATQRGEIEST------------------------VESISDLEDDQSHRV--GKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVRFLRIVPYSFYLCQDCDCRTLDYSSSKQCADCSHSSVRHFCWWNRYIANPIQAHGNADGRKRAMILLKHKILKSILLRRTKKERAADLALPPRIITLRRDTLDIREEDYYTSLYNESQSQFNTYVEAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKSAALRSGVMVEPDTG--VQPCGVCHEPAEDPVVTSCVHVFCKACLLDFSTASGQLSCPSCSKPVTLDLSSKSDVGNNSSKSTIKGFKSASILNRIQLNEFQTSTKIEALREEIRFMIERDGSAKGIVFSQFASFLDLINYSLQKSGINCVQLVGDMTINARDGAIKKFTVDPYCK 787          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: V4U4I0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014220mg PE=4 SV=1)

HSP 1 Score: 955.666 bits (2469), Expect = 0.000e+0
Identity = 517/816 (63.36%), Postives = 601/816 (73.65%), Query Frame = 3
Query:  132 MQLRSRK---RTSNFSTNEEHSDSSDQADN----FIQLDDLSDSETYVRSSDSD----------LGEEEILDLNHKAVKAAPITISDFT---------EPPTNR---GNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGG-QSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            M+LRSRK   ++S     +    +S + D+     I L D+SD E YV SSDSD           G+  IL L   +++   +T S  T         EP   R   G    +   +  +Q     + + K+  T+ KK+ R+G  L+WE+WE+EHE+WID +   DVDLDQQNA +TET++   DLI PLLRYQKEWLAWALKQE+S  +GGILADEMGMGKTIQAIALVLAKR++  TIGE + SS +   ST L  I+ TLVICPV AV+QWVSEI+RFTS GSTKVL+YHG NR ++ KQFSE+DFVITTYSI+EA+YRK +MPPK+KC YCGKSF+QKKL VHLKY+CGP A++TE QSKQE+KK KS    G     N                            ++S G       GKS LHS+KWERIILDEAHF+KDRR NTAKAVL+LES YKWALSGTPLQNRVGELYSLVRFLQI PYSYY CKDCDCK LDYSS+ +CP CPHNSVRHFCWWN+YVATPIQ +GN   G+RAMILLKHK+L++++LRRTKKGRAADLALPPRI+SLRRD++DI+E DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS TA+ R       D    +QVCG+CND A+DPVVT C H FCKACL D SAS     CP+CS  LTVD T N   G ++SKTT+KGFKSSSILNRIQL++FQ+STKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI YSLHKS + CVQLVGSMS+ ARDAAI  FTEDP CK
Sbjct:    1 MELRSRKTIGQSSGSGDAQGKQGNSGEGDSKGKGIIDLSDVSDDEIYVPSSDSDSFHSDDECKIYGDRHILKLG-LSLETNNLTSSSVTGEFSIDLNAEPAAEREEVGPSNLVYCREQPAQAKGKKNESNKKKKTRGKKRQRTGSSLLWEIWEEEHERWIDMHEKDDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSS---STGLLGIKATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGLNRERSTKQFSEFDFVITTYSIIEADYRKHVMPPKQKCQYCGKSFYQKKLVVHLKYFCGPSAVRTEKQSKQEKKKMKSSVYEGYPGKKN--------------------------GKKSSVGGVQKPSGGKSPLHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPYSYYFCKDCDCKVLDYSSA-ECPNCPHNSVRHFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGET--EADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPHCK 783          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: M1D7D0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400033659 PE=4 SV=1)

HSP 1 Score: 945.651 bits (2443), Expect = 0.000e+0
Identity = 453/669 (67.71%), Postives = 537/669 (80.27%), Query Frame = 3
Query:  483 LMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489
            L+WE+WE+E++ W+  N   D D + Q+ ++TET+   SDLI+PLLRYQKEWLAWALKQE+S  +GGILADEMGMGKT+QAIALVLAKR++   I   ++ S    +S +LP ++ TLVICPVVAV QWVSEIDRFT++GS K+LVYHGANR KN+ +F+EYDFVITTYS VEAEYRK +MPPKEKC +CGKSF+++KLSVH KY+CGPDA+KT  QSKQ+ K      K  K            +  + K    K + D     D   AG++ ++   KS+LHSVKW RIILDEAH+VKDRR NT +A+L+LES YKWALSGTPLQNRVGELYSLVRFLQIVPYSYY CKDCDC+ LDYSSS +CP CPH  +RHFCWWN+Y+A+PIQ  GN   G+ AM+LLKHKILK+I+LRRTKKGRAADLALPPRI++LR+D++D+KE DYY SLY+ESQAQFNTY+QAGT+MNNYAHIFDLLTRLRQAVDHPYLVVYSSTA  R  +    D    EQ CG+C+DP EDPVVT+C HVFCK+CLIDFSAS+G VSCPSCS+ LTVD T N  G Q SK T+KGF+SSSILNRI L+DFQTSTKIEALREEIRFM+ERDGSAK IVFSQFTSFLDLI YSL KS + CVQL GSMS+ ARD+AI+ FTEDPDC+
Sbjct:  129 LLWEIWEEENDSWMAVNYPNDPDFNSQDELVTETAQPPSDLIMPLLRYQKEWLAWALKQEESTARGGILADEMGMGKTVQAIALVLAKRELGQVISGSSLLSPAPCTSQELPAVKGTLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGANRVKNIDKFAEYDFVITTYSTVEAEYRKNVMPPKEKCQWCGKSFYEQKLSVHQKYFCGPDAVKTAKQSKQQSKTGGKPSKLKKNPIEGDSEIDTGKRGRGKGIKRKSETDAGSVDDSACAGQDMSMR--KSILHSVKWNRIILDEAHYVKDRRSNTTRAILALESSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCKDCDCRVLDYSSS-ECPHCPHKPIRHFCWWNRYIASPIQSQGNHGTGRDAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQFNTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARRES--TNDAGSVEQPCGLCHDPVEDPVVTSCTHVFCKSCLIDFSASVGQVSCPSCSKPLTVDFTANDKGDQKSKATIKGFRSSSILNRIHLDDFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFLDLIHYSLQKSGVSCVQLDGSMSMTARDSAIRRFTEDPDCR 792          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: ULS1_YEAST (ATP-dependent helicase ULS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ULS1 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.530e-30
Identity = 115/439 (26.20%), Postives = 188/439 (42.82%), Query Frame = 3
Query: 1350 RIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDE-----------------QVCGICN-----------DPAEDPVVTACAHVFCKACL---IDFSASLGN----------VSCPSCSRLLT-VDLTTNA------DGGQSSKTTLKGFKSSSILNRIQ--------LNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSL-HKSSIKCVQLVGSMSLAARDAAIKSFTEDPD 2483
            RI+LDE   +K++    +KA  ++  +Y+W LSGTP+QN + ELYSL+RFL+I PY                         H   R      ++     Q+  + E  K A  L K ++L N ++ R  K    D    L LPP+I+ +    +  +E  +Y +L S++QA     +   T   +Y+ +  LL RLRQA  H  LVV     A+    + NG   +D+                 QV    N           +P    V+T C H+ C  C+   I+ S+ L            + C  C RL    D+ ++       + G + +     + S     +IQ            + STKIE   + I+ + +   + K I+FSQFT+F +++++ L +K +   ++ +GSM+   R   I  F  DP+
Sbjct: 1104 RILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPY-------------------------HKEQRFKLDIGRFFQRNKQYQYDNEDRKNA--LRKVRVLLNAIMLRRSKADKIDGKPLLELPPKIVEVDESRLKGEELKFYTALESKNQALAKKLLNNST-RGSYSSVLTLLLRLRQACCHSELVVMGEKKAE-GTKVANGKSFEDDWLRLYYKITHMSGEAQAQVITSMNSMTCFWCMEQLEPEAMSVLTGCGHLICDTCIEPFIEESSMLPQAKKTKGGAFAIPCKDCQRLTNEKDIVSHKLYDQVINQGFTEEDLHAEYLSEMEKQKIQQKNVYVPNFESLEPSTKIEQCIQVIQRVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPE 1513          

HSP 2 Score: 84.7297 bits (208), Expect = 2.403e-15
Identity = 46/159 (28.93%), Postives = 83/159 (52.20%), Query Frame = 3
Query:  549 DLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEID-RFTSRGSTKVLVYHGANRG--KNVKQFSEYDFVITTYSIVEAEYRK 1016
            ++ Q  ++I   +    D+ + LL++Q+  L W L+ E+S  KGG+LAD+MG+GKTIQAIAL+LA R                   ++  + +  L++ PV  +  W  E++ +   R      ++ G+  G  K+ +  + YD V+ +Y  +  E++K
Sbjct:  921 NVKQSESIIDGEALTPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANR-------------------SEESKCKTNLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANEFKK 1060          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_KLULA (DNA repair protein RAD5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RAD5 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.489e-29
Identity = 107/435 (24.60%), Postives = 192/435 (44.14%), Query Frame = 3
Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS-----------STAAQRAGNI------------VNGDRND------------DEQV----CGICNDPAEDPV----VTACAHVFCKACLIDFSASLGN----VSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLH----KSSIKCVQLVGSMSLAARDAAIKSF 2468
            L +V + RIILDE H +++R   T+KAV++L S  KW L+GTP+ NR+ +L+SLV+FL + P+S                             H  +W +YV+ P   +  G   +   ++  + +L+ ++LRRTK  +  D    ++LPP+ + + +  +   E   Y+S+  +++      +  G ++ NY +I   + RLRQ   H  L+  +             + Q   +I            ++ D+ D             EQ+    C IC     +P+    +T C H FC+ CL ++     N    ++CP C   ++     N    +      +G++  S  +  Q      STKI+AL   ++ + E     + IVFSQF+SFLD+++  L     +  +   +  G + +  R   ++ F
Sbjct:  616 LFNVVFFRIILDEGHTIRNRSTRTSKAVIALRSSRKWILTGTPIINRLDDLFSLVQFLNLEPWS-----------------------------HINYWKRYVSVP---FEKGNYAQAFDVI--NAVLEPVLLRRTKNMKDVDGKPLVSLPPKEVIVEKLQLSSSEKRVYQSMLEDAENSVKEGLAKGDLLKNYTNILVHILRLRQVCCHLDLLKKTPDLGDPDLEDLENSTQNISSILMPKNIKSPKSSISQDKLDALSANFRDIHSASEQLPSFECAICTTECIEPLSAVSITECLHTFCEPCLAEYIEFQQNKKLSINCPYCRMPIS---EANVLKLKEPIDAERGYELISFHSHFQ------STKIKALLRHLKQIQETSPGEQIIVFSQFSSFLDILEIELRSHLPRDQVIIYKFDGRLDMKERTRILEQF 1007          

HSP 2 Score: 63.929 bits (154), Expect = 4.727e-9
Identity = 43/134 (32.09%), Postives = 67/134 (50.00%), Query Frame = 3
Query:  678 GGILADEMGMGKTIQAIALVL------AKRQVLHTIGEPN---VSSQTAGSST-------DLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEY-------DFVITTYSIVEAEY 1010
            GGILADEMG+GKTI A+AL+       A  + + +  +P+   +SSQ   S         D    R TL++ P+  ++QW SE ++       +  +Y+    G N+K    Y         +ITTY I+++EY
Sbjct:  479 GGILADEMGLGKTISALALICTASYDEAHEKKIESTKKPSMKEMSSQVDSSPLRHSQHKHDTYAYRTTLIVVPMSLLNQWQSEFEKANKDLKKRCEIYY----GNNIKDLRAYVLGPNAPSVIITTYGIIQSEY 608          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: SM3L1_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 OS=Arabidopsis thaliana GN=At5g05130 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.399e-29
Identity = 98/395 (24.81%), Postives = 175/395 (44.30%), Query Frame = 3
Query: 1323 SLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDH-----PYLVVYSSTAA--------QRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468
            S +  ++W RIILDEAH +K+     ++ V  L++  +WA++GTP+QN   +LYSL+ FL+  P+S                                +W   +  P+   GN +   R  +L+       I LRRTK+   + + LPP+ +      +  +E   Y+ +  E++      +  G++M NY+ +  ++ RLRQ  D      P L  ++++ +        +    +V   ++ ++  C IC  P  + ++T CAH+FC+AC++  +       CP C   LT     NA       +   G  + S            S+K+ AL   +    + + + K +VFSQF   L L++  L  +    ++L G+M++  R   I  F
Sbjct:  424 SPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIK-----------------------------SYWQSLIQRPLGQ-GNKKGLSRLQVLMA-----TISLRRTKE--KSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCPPELRSFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCAHIFCRACILQ-TLQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSS---------TKSSKVSALLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEF 771          

HSP 2 Score: 67.781 bits (164), Expect = 3.656e-10
Identity = 48/188 (25.53%), Postives = 75/188 (39.89%), Query Frame = 3
Query:  615 LLRYQKEWLAWALKQEDS---------------NT-------------KGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPN---------------VSSQTAGSSTDLPRIR--------------CTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAE 1007
            L  +QKE L W L +E S               NT             +GG+ AD+MG+GKT+  ++L+   R    +   P                       SS  + R +               TL++CP   +S W+++++  T  G  KV +YHG  R  +V +  +YD V+TTY  +  E
Sbjct:  231 LFAHQKEGLGWLLHREKSGELPPFWEEKDGEFLNTLTNYRSDKRPDPLRGGVFADDMGLGKTLTLLSLIAFDRYGNASTSTPTEEPLDGEGDKIEKKGKKRGRGKSSESVTRKKLKTDDVVGMNVSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMKYDIVLTTYGTLAVE 418          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_YARLI (DNA repair protein RAD5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RAD5 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.833e-27
Identity = 106/416 (25.48%), Postives = 176/416 (42.31%), Query Frame = 3
Query: 1344 WERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDR-----------NDDEQV---------------------CGICNDPAEDPVVTACAHVFCKACLID---FSASLGNVS-CPSCSRLLTV-DLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468
            + RI+LDEAH +K+R   +AKA   L +  KWAL+GTP+ NR+ +L+S+++FL   P++                              F +W  ++  P Q    G+I    M +    IL+ IVLRRTK  + AD    + LP + I++ +  +  +E   Y  + + +Q        +  V  NY +I   + RLRQ+   P L++           +   +            NDD Q                      C IC +      ++ C H+ C  CL D   F  S      C  C +   + D+      G+  K           +   +L+D   S+K+ AL  +++ + +    AK +VFSQFTS+LD+I+  L +  I+  +  G++S   R   +K+F
Sbjct:  552 FHRIVLDEAHVIKNRNTVSAKACCLLRATNKWALTGTPIHNRLEDLFSILKFLGAAPWN-----------------------------DFIYWRNFITLPFQE---GKIVSALMTV--QCILEPIVLRRTKNMKQADGSPLVVLPKKTINIEKVALTDQERVIYSYVLARAQTSLQKSEASEAVGRNYLNILTQILRLRQSCCDPALILRPEAEVPTDEQLQIEENESQLKSMIQQYNDDTQTSACEYSSEIIAQLQDQSAPPECPICAEDVTKLAISKCLHMGCVDCLADNVRFQESKKQTPVCCICRQPAALKDIFEVERTGEDCKD----------IRLKKLSDRPRSSKLVALVSKLKQLPK---DAKSVVFSQFTSYLDIIQTELRREKIQAFRFDGTLSRQQRTDVLKAF 920          
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_ASHGO (DNA repair protein RAD5 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RAD5 PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.251e-26
Identity = 108/435 (24.83%), Postives = 184/435 (42.30%), Query Frame = 3
Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDH-----------------------PYLVVYSSTAAQRAGNIVNG--DRNDDEQV------------CGICNDPAEDP----VVTACAHVFCKACL---IDFSASLGNVS-CPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCV----QLVGSMSLAARDAAIKSFTE 2474
            L SV++ RIILDE H +++R   T+KAV++L S  KW L+GTP+ NR+ +L+SL++F+   P+    CK      +DY                   W ++V+ P +          + + +   ++  I+LRRTK  +  D    + LPP+ + +        E   Y+   S+++      +  G ++  Y+ I   + RLRQ   H                       P +       +Q  G+   G  D  +D +             C IC   A  P    V T C H FC++CL   I F    G+ + CP+C                 S+  LK    +  L  +  ++ + S+KI AL   ++ + +   + + +VFSQF+S+LD+++  L +S    +    +  G + L  R   +  FTE
Sbjct:  592 LFSVEFFRIILDEGHNIRNRTTKTSKAVMALTSRRKWVLTGTPIMNRLDDLFSLIKFMNFEPW----CK------IDY-------------------WRQFVSDPFEKKDYS-----SALEVIQAVMGPILLRRTKNMKDEDGNPLVQLPPKEVVIEMIRFSDTEAGLYKYFLSKAEHSVKESLARGDLLKKYSTILLHILRLRQVCCHFKLLGSQDENDEDLKNMKLINDIPDISTLLGEDSQSPGSSSEGMPDFIEDFKTKYPNSDALKDLECSICTCEAISPLTSVVFTRCGHPFCESCLLEYIQFQNKKGSETICPNCR------------AAVESRYLLKLEDINGKLEPVPYSNTKKSSKIVALIRHLKHLQDTSANEQVVVFSQFSSYLDILENELRQSFASDICEIYKFDGRLDLKERSNVLAKFTE 980          

HSP 2 Score: 64.3142 bits (155), Expect = 4.057e-9
Identity = 48/127 (37.80%), Postives = 63/127 (49.61%), Query Frame = 3
Query:  675 KGGILADEMGMGKTIQAIALVLA----KRQVLHTIGE-PNVS--SQTAGSSTDLPRI-RCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGAN----RGKNVKQFSEYDFVITTYSIVEAEYRKF 1019
            KGGILADEMG+GKTI  +AL+       + +L T  E P V   S   G ST  P     TL++ P+  + QW +E  R          VY+  N    R   VKQ S    V+TTY +V+ E+ K 
Sbjct:  454 KGGILADEMGLGKTISILALITMVPSDTKHLLTTAQEKPPVGHLSLELGISTVKPYTASTTLIVVPMSLLPQWRNEFVRVNDGNGLYCEVYYAGNVSNLRTLLVKQKSPPSVVLTTYGVVQTEWSKL 580          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061EBD2_THECC0.000e+088.36Helicase protein with RING/U-box domain isoform 5 ... [more]
A0A0D2REN7_GOSRA0.000e+098.67Uncharacterized protein OS=Gossypium raimondii GN=... [more]
F6HIC3_VITVI0.000e+073.74Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SFQ7_RICCO0.000e+063.67DNA repair helicase rad5,16, putative OS=Ricinus c... [more]
M5X3R4_PRUPE0.000e+064.77Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
A0A067JT95_JATCU0.000e+071.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A058ZZU3_EUCGR0.000e+061.27Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A058ZZM1_EUCGR0.000e+061.27Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
V4U4I0_9ROSI0.000e+063.36Uncharacterized protein OS=Citrus clementina GN=CI... [more]
M1D7D0_SOLTU0.000e+067.71Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ULS1_YEAST3.530e-3026.20ATP-dependent helicase ULS1 OS=Saccharomyces cerev... [more]
RAD5_KLULA1.489e-2924.60DNA repair protein RAD5 OS=Kluyveromyces lactis (s... [more]
SM3L1_ARATH4.399e-2924.81Putative SWI/SNF-related matrix-associated actin-d... [more]
RAD5_YARLI3.833e-2725.48DNA repair protein RAD5 OS=Yarrowia lipolytica (st... [more]
RAD5_ASHGO1.251e-2624.83DNA repair protein RAD5 OS=Ashbya gossypii (strain... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 633..672
e-value: 1.7E-6
score: 37.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 633..673
score: 12.106
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 158..478
e-value: 6.0E-28
score: 108.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 175..460
score: 15.162
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 158..290
e-value: 1.0E-29
score: 102.7
coord: 398..462
e-value: 1.0E-29
score: 102.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 711..781
e-value: 9.4E-5
score: 21.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 123..292
coord: 397..462
coord: 492..533
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 707..785
coord: 535..645
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 625..679
e-value: 7.1E-13
score: 47.4
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 633..672
e-value: 1.3E-7
score: 31.2
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 497..609
coord: 4..19
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 397..467
NoneNo IPR availablePANTHERPTHR10799:SF763SUBFAMILY NOT NAMEDcoord: 4..19
NoneNo IPR availablePANTHERPTHR10799:SF763SUBFAMILY NOT NAMEDcoord: 97..292
coord: 397..467
NoneNo IPR availablePANTHERPTHR10799:SF763SUBFAMILY NOT NAMEDcoord: 648..672
coord: 706..786
NoneNo IPR availablePANTHERPTHR10799:SF763SUBFAMILY NOT NAMEDcoord: 497..609
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 648..672
coord: 97..292
coord: 706..786
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 628..677
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 177..463
e-value: 3.6E-47
score: 160.6
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 648..657

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0000197 ID=g.arboreum_cottongen_reftransV1_0000197; Name=g.arboreum_cottongen_reftransV1_0000197; organism=Gossypium arboreum; type=contig; length=2490bp
CAAGTCAACAATTACAACACCCCACATTCCCGCCGCCCAATCACCTATTT
CTTTCTCTCTCACTGATCATTCGTCTTCATTCAATCGGGAACTAAACGTC
AAATTCACTCCATTTACATCCTCCTTCCCAAATGCAGCTTCGATCGCGTA
AAAGGACCTCCAACTTCTCTACCAATGAAGAACACAGCGATAGTTCTGAC
CAAGCCGATAATTTTATCCAGTTGGATGATCTCTCCGATTCAGAAACCTA
TGTCCGTTCCTCCGATTCTGATCTAGGGGAAGAGGAGATTCTGGACTTAA
ACCATAAAGCAGTGAAAGCTGCTCCTATCACCATTTCTGATTTTACCGAG
CCTCCAACAAACAGAGGCAATGGTGAACAGATACTATCTGAGCAAAATGA
AAGCCAGTTTGACTTTAATGTGTCAACCGCGAAGAAGAGAAACAATACAA
AAAGGAAAAAGAAGGCTAGGTCTGGGCAACCGTTAATGTGGGAAGTTTGG
GAACAAGAGCATGAGAAATGGATTGATGAGAATTTGACGGTAGATGTTGA
TCTTGATCAACAGAATGCGGTAATAACTGAGACTTCTGACGCATCATCCG
ACTTAATTATTCCTTTGTTGAGGTACCAAAAGGAATGGTTGGCCTGGGCT
CTGAAACAGGAAGACTCAAATACCAAAGGGGGAATCCTTGCAGATGAGAT
GGGAATGGGGAAGACCATTCAAGCGATAGCCCTTGTCCTTGCCAAACGTC
AAGTACTCCATACAATTGGTGAACCCAATGTTTCGTCACAGACTGCAGGT
TCATCAACAGATTTGCCCAGGATAAGATGCACCCTTGTTATTTGTCCGGT
TGTTGCGGTGAGTCAGTGGGTAAGTGAGATTGATCGGTTTACTTCAAGGG
GAAGCACCAAGGTGTTGGTTTACCATGGTGCCAATAGAGGGAAAAATGTG
AAACAGTTCTCAGAATATGATTTTGTAATAACAACATATTCGATTGTTGA
GGCTGAATATAGGAAATTCATGATGCCACCAAAGGAGAAATGCCCTTACT
GTGGGAAGTCATTTCACCAAAAGAAGCTCTCCGTTCACTTGAAATATTAT
TGTGGGCCTGATGCTATTAAAACAGAAAACCAATCTAAGCAAGAGAGAAA
GAAACCAAAATCTATGTTCAAGTCAGGCAAAAAACATGCTAGTAATTATG
AAGCTGATTCCAGAAAGAGGGCTAGCAAGAAGAAAGCAAAGCATAATAAG
GAAGACAAAGACAGAGACTTTGAGTTTGATGAAACTTCTGCAGGCAAAGA
ACATAACTTGCCTGAGGGAAAATCACTTCTACACTCTGTGAAGTGGGAGC
GCATCATCTTGGATGAGGCTCATTTTGTGAAAGATAGACGTTGTAATACT
GCAAAGGCTGTCCTTTCTTTGGAATCCTTATACAAATGGGCTTTGAGTGG
CACTCCACTGCAGAATCGTGTTGGAGAACTGTACTCTTTGGTTCGCTTCT
TGCAAATAGTTCCATACTCCTATTACTTGTGCAAAGATTGTGACTGCAAA
ACTCTTGATTATAGTTCATCAACACAATGCCCAAAGTGCCCCCATAATTC
TGTGAGGCATTTTTGTTGGTGGAATAAGTATGTGGCTACGCCAATACAAC
ATTATGGAAATGGTGAGATCGGGAAAAGAGCTATGATATTGCTAAAACAC
AAAATTTTGAAGAACATTGTCCTAAGGCGTACCAAGAAAGGCAGGGCTGC
TGATCTTGCTCTTCCTCCTAGAATTATTTCCTTGAGACGGGACACCATGG
ACATTAAAGAAACTGACTATTATGAATCTTTGTACAGTGAAAGTCAGGCA
CAATTTAACACATATGTTCAAGCAGGAACTGTAATGAACAATTATGCTCA
CATTTTTGACCTCCTCACACGCTTGCGGCAGGCTGTTGATCACCCTTACC
TTGTAGTATATTCGAGTACTGCTGCACAAAGAGCTGGAAACATAGTCAAT
GGTGATAGGAATGATGATGAACAAGTTTGTGGCATTTGCAATGATCCTGC
AGAAGATCCAGTGGTTACTGCATGTGCACATGTCTTCTGCAAAGCTTGTC
TGATTGATTTTTCTGCCTCCCTGGGAAATGTCTCATGCCCCTCATGCTCA
AGATTACTTACTGTTGATCTGACTACGAATGCAGATGGAGGGCAATCTAG
CAAAACAACACTGAAGGGGTTTAAATCCTCAAGTATTCTGAACAGAATTC
AATTAAATGATTTTCAGACGAGCACTAAAATAGAGGCTTTGAGGGAAGAA
ATCAGATTCATGGTGGAAAGAGATGGTTCTGCGAAGGGAATTGTTTTCAG
CCAATTCACATCTTTCTTGGATCTCATAAAATACTCCCTTCATAAGTCCA
GCATAAAATGTGTTCAACTAGTAGGGAGCATGTCCTTGGCTGCGAGAGAT
GCTGCAATTAAGAGTTTTACTGAGGATCCAGATTGCAAGA
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR013083Znf_RING/FYVE/PHD
IPR000330SNF2_N
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0005524ATP binding