g.arboreum_cottongen_reftransV1_0000197, g.arboreum_cottongen_reftransV1_0000197 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0B0PDD3_GOSAR (ATP-dependent helicase rhp16 OS=Gossypium arboreum GN=F383_06284 PE=4 SV=1) HSP 1 Score: 1512.66 bits (3915), Expect = 0.000e+0 Identity = 786/786 (100.00%), Postives = 786/786 (100.00%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRASKKKAKHNKEDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 1 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRASKKKAKHNKEDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 786
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2NCC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1) HSP 1 Score: 1502.65 bits (3889), Expect = 0.000e+0 Identity = 777/786 (98.85%), Postives = 781/786 (99.36%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MQLRSRKRTSNFS NEEHSDSSDQADNFIQLDDLSDSETYV SSDSDLGEEEILDLNHKAVK APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN+VNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLD+IKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 1 MQLRSRKRTSNFSANEEHSDSSDQADNFIQLDDLSDSETYVPSSDSDLGEEEILDLNHKAVKPAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 786
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2SGI5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1) HSP 1 Score: 1502.26 bits (3888), Expect = 0.000e+0 Identity = 777/786 (98.85%), Postives = 781/786 (99.36%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MQLRSRKRTSNFS NEEHSDSSDQADNFIQLDDLSDSETYV SSDSDLGEEEILDLNHKAVK APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN+VNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLD+IKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 1 MQLRSRKRTSNFSANEEHSDSSDQADNFIQLDDLSDSETYVPSSDSDLGEEEILDLNHKAVKPAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 786
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2RL38_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1) HSP 1 Score: 1496.1 bits (3872), Expect = 0.000e+0 Identity = 776/786 (98.73%), Postives = 780/786 (99.24%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MQLRSRKRTSNFS NE HSDSSDQADNFIQLDDLSDSETYV SSDSDLGEEEILDLNHKAVK APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN+VNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLD+IKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 1 MQLRSRKRTSNFSANE-HSDSSDQADNFIQLDDLSDSETYVPSSDSDLGEEEILDLNHKAVKPAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 785
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2NCD2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1) HSP 1 Score: 1441.4 bits (3730), Expect = 0.000e+0 Identity = 748/756 (98.94%), Postives = 752/756 (99.47%), Query Frame = 3 Query: 222 LDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 LDDLSDSETYV SSDSDLGEEEILDLNHKAVK APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN+VNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLD+IKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 72 LDDLSDSETYVPSSDSDLGEEEILDLNHKAVKPAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 827 HSP 2 Score: 80.1073 bits (196), Expect = 2.526e-19 Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 2 Query: 2 KSTITTPHIPAAQSPISFSLTDHSSSFNRELNVKFTPFTSSFPNAA 139 KSTITTPHIPAAQS ISFSLTDHSSSF+RELNVKFTP TSS P + Sbjct: 13 KSTITTPHIPAAQSLISFSLTDHSSSFHRELNVKFTPLTSSLPKCS 58 HSP 3 Score: 44.669 bits (104), Expect = 2.526e-19 Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 1 Query: 124 LPKCSFDRVKGPPTSLPM 177 LPKCSFDRVKGPPTSLPM Sbjct: 54 LPKCSFDRVKGPPTSLPM 71
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2PSQ5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1) HSP 1 Score: 1412.51 bits (3655), Expect = 0.000e+0 Identity = 731/738 (99.05%), Postives = 735/738 (99.59%), Query Frame = 3 Query: 276 GEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 GEEEILDLNHKAVK APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN+VNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLD+IKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 4 GEEEILDLNHKAVKPAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 741
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A061ECV1_THECC (Helicase protein with RING/U-box domain isoform 1 OS=Theobroma cacao GN=TCM_011915 PE=4 SV=1) HSP 1 Score: 1327 bits (3433), Expect = 0.000e+0 Identity = 688/796 (86.43%), Postives = 724/796 (90.95%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKA--------APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXX-XRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MQLR RKRTSN ++NEE SDSSD+AD+FIQLDDLSD E YV SSDSD GE EI DLNHK + A APIT+SDF EP TNR N EQ +EQNE +DF VS+ KKRNN KRKKK ARSG LMWEVWEQEHEKWIDENLT DVDLDQQNAVITETS+AS DLIIPLLRYQKEWLAWALKQEDS TKGGILADEMGMGKTIQAIALVLAKR++L TI EPN SS T SSTDLP IR TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHG NRGKN+KQF +YDFVITTYSIVEAEYRK+MMPPKEKCPYCGKSF+QKKLSVHLKYYCGPDA+KTE QSKQERKK KS+FKS ++H SNYE D RK A KKK+KHN+EDKD DFEFD+T AG EH+LP+GKSLLHSVKWERIILDEAHFVKDRRCNTAKAVL+LESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQC CPHNSVRHFCWWNKYVATPIQ GNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRI+SLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTA+QRAG+IVN D+N+DEQVCGIC+DP E+PVVTACAHVFCKACLIDFSASLG VSCPSCSRLLTVDLTT AD GGQSS+TTLKGFKSSSILNRIQLNDFQTSTKIEALREEI MVERDGSAKGIVFSQFTSFLDLI YSLHKS I CVQLVGSMS+AARDAAIK FTEDPDCK Sbjct: 1 MQLRPRKRTSNPASNEEPSDSSDKADDFIQLDDLSDQEIYVPSSDSDQGEVEIFDLNHKPMTATAVSHLAFAPITVSDFAEPSTNRSNAEQQSTEQNEGDYDFYVSSRKKRNNVKRKKKKARSGPLLMWEVWEQEHEKWIDENLTADVDLDQQNAVITETSEASPDLIIPLLRYQKEWLAWALKQEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSSTDLPMIRGTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAEYRKYMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQERKKSKSVFKSDREHTSNYETDMRKGAGKKKSKHNEEDKDLDFEFDDTFAGVEHSLPQGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCGICHDPTEEPVVTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSILNRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSMAARDAAIKRFTEDPDCK 796
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A061EIX6_THECC (Helicase protein with RING/U-box domain isoform 3 OS=Theobroma cacao GN=TCM_011915 PE=4 SV=1) HSP 1 Score: 1323.53 bits (3424), Expect = 0.000e+0 Identity = 688/796 (86.43%), Postives = 724/796 (90.95%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKA--------APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXX-XRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MQLR RKRTSN ++NEE SDSSD+AD+FIQLDDLSD E YV SSDSD GE EI DLNHK + A APIT+SDF EP TNR N EQ +EQNE +DF VS+ KKRNN KRKKK ARSG LMWEVWEQEHEKWIDENLT DVDLDQQNAVITETS+AS DLIIPLLRYQKEWLAWALKQEDS TKGGILADEMGMGKTIQAIALVLAKR++L TI EPN SS T SSTDLP IR TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHG NRGKN+KQF +YDFVITTYSIVEAEYRK+MMPPKEKCPYCGKSF+QKKLSVHLKYYCGPDA+KTE QSKQERKK KS+FKS ++H SNYE D RK A KKK+KHN+EDKD DFEFD+T AG EH+LP+GKSLLHSVKWERIILDEAHFVKDRRCNTAKAVL+LESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQC CPHNSVRHFCWWNKYVATPIQ GNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRI+SLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTA+QRAG+IVN D+N+DEQVCGIC+DP E+PVVTACAHVFCKACLIDFSASLG VSCPSCSRLLTVDLTT AD GGQSS+TTLKGFKSSSILNRIQLNDFQTSTKIEALREEI MVERDGSAKGIVFSQFTSFLDLI YSLHKS I CVQLVGSMS+AARDAAIK FTEDPDCK Sbjct: 1 MQLRPRKRTSNPASNEEPSDSSDKADDFIQLDDLSDQEIYVPSSDSDQGEVEIFDLNHKPMTATAVSHLAFAPITVSDFAEPSTNRSNAEQQSTEQNEGDYDFYVSSRKKRNNVKRKKKKARSGPLLMWEVWEQEHEKWIDENLTADVDLDQQNAVITETSEASPDLIIPLLRYQKEWLAWALKQEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSSTDLPMIRGTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAEYRKYMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQERKKSKSVFKSDREHTSNYETDMRKGAGKKKSKHNEEDKDLDFEFDDTFAGVEHSLPQGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCGICHDPTEEPVVTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSILNRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSMAARDAAIKRFTEDPDCK 796
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2REP5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1) HSP 1 Score: 1300.8 bits (3365), Expect = 0.000e+0 Identity = 662/668 (99.10%), Postives = 666/668 (99.70%), Query Frame = 3 Query: 486 MWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN+VNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLD+IKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 1 MWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 668
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A061EB75_THECC (Helicase protein with RING/U-box domain isoform 2 OS=Theobroma cacao GN=TCM_011915 PE=4 SV=1) HSP 1 Score: 1244.57 bits (3219), Expect = 0.000e+0 Identity = 641/725 (88.41%), Postives = 672/725 (92.69%), Query Frame = 3 Query: 321 APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXX-XRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 APIT+SDF EP TNR N EQ +EQNE +DF VS+ KKRNN KRKKK ARSG LMWEVWEQEHEKWIDENLT DVDLDQQNAVITETS+AS DLIIPLLRYQKEWLAWALKQEDS TKGGILADEMGMGKTIQAIALVLAKR++L TI EPN SS T SSTDLP IR TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHG NRGKN+KQF +YDFVITTYSIVEAEYRK+MMPPKEKCPYCGKSF+QKKLSVHLKYYCGPDA+KTE QSKQERKK KS+FKS ++H SNYE D RK A KKK+KHN+EDKD DFEFD+T AG EH+LP+GKSLLHSVKWERIILDEAHFVKDRRCNTAKAVL+LESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQC CPHNSVRHFCWWNKYVATPIQ GNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRI+SLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTA+QRAG+IVN D+N+DEQVCGIC+DP E+PVVTACAHVFCKACLIDFSASLG VSCPSCSRLLTVDLTT AD GGQSS+TTLKGFKSSSILNRIQLNDFQTSTKIEALREEI MVERDGSAKGIVFSQFTSFLDLI YSLHKS I CVQLVGSMS+AARDAAIK FTEDPDCK Sbjct: 12 APITVSDFAEPSTNRSNAEQQSTEQNEGDYDFYVSSRKKRNNVKRKKKKARSGPLLMWEVWEQEHEKWIDENLTADVDLDQQNAVITETSEASPDLIIPLLRYQKEWLAWALKQEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSSTDLPMIRGTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAEYRKYMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQERKKSKSVFKSDREHTSNYETDMRKGAGKKKSKHNEEDKDLDFEFDDTFAGVEHSLPQGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCGICHDPTEEPVVTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSILNRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSMAARDAAIKRFTEDPDCK 736
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RHP16_SCHPO (ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rhp16 PE=3 SV=2) HSP 1 Score: 354.755 bits (909), Expect = 8.772e-107 Identity = 181/391 (46.29%), Postives = 260/391 (66.50%), Query Frame = 3 Query: 1320 KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLD--YSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLG---NVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTED 2477 KSLLH +++ RIILDEAH +K R CNTA+AV L + K LSGTPLQNR+GEL+SL+RFL+ P++YY C C+CK+L +S + C +C H + H C++N + PIQ +G GK A + H +LK+I+LRRTK RA DL LPPR++ +R+D + +E D Y+SLY +S+ +FNTY+ G V+NNYA+IF L+TR+RQ DHP LV+ S ++ +I N + VC IC++ A+D + + C H FC+ C+ ++ + G NV+CPSC L++DL+ A S + FK++SILNRI +N +++STKIEAL EE+ + ++D + K IVFSQFTS LDLI + L K+ CV+L G M+ AR A I++F+ D Sbjct: 379 KSLLHQMEFYRIILDEAHGIKSRTCNTARAVCGLRTTRKICLSGTPLQNRIGELFSLLRFLRADPFAYYYCLQCECKSLHWRFSDRSNCDECGHKPMSHTCYFNAEMLKPIQKFGYEGPGKLAFKKV-HSLLKHIMLRRTKLERADDLGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKFNTYLAEGVVLNNYANIFQLITRMRQMADHPDLVLASK---RKTVDI----ENQENIVCKICDEVAQDAIESRCHHTFCRLCVTEYINAAGDGENVNCPSCFIPLSIDLSAPALEDFSEEK----FKNASILNRIDMNSWRSSTKIEALVEELYLLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSND 757 HSP 2 Score: 108.997 bits (271), Expect = 4.891e-23 Identity = 58/139 (41.73%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 600 DLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRK 1016 +L++ LL +Q+E + W +QEDS+ GGILADEMGMGKTIQ IAL+L++ PR + TLV+ PVVA+ QW EID T++ + L Y+G R + ++ S YD V+T+Y+++E+ YRK Sbjct: 250 ELVLNLLPFQREGVYWLKRQEDSSFGGGILADEMGMGKTIQTIALLLSE-----------------------PRGKPTLVVAPVVAIMQWKEEIDTHTNKALSTYL-YYGQARDISGEELSSYDVVLTSYNVIESVYRK 364
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD16_YEAST (DNA repair protein RAD16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD16 PE=1 SV=1) HSP 1 Score: 322.398 bits (825), Expect = 1.934e-95 Identity = 167/405 (41.23%), Postives = 256/405 (63.21%), Query Frame = 3 Query: 1296 KEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLD--YSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASL----GNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLN-DFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 +++ L + S+LH++ + R+ILDEAH +KDR+ NTA+AV +L++ +W LSGTPLQNR+GE+YSL+RFL I P++ Y C CDC + D ++ C C H ++H ++N ++ IQ +G G + ++ +LKNI+LRRTK RA DL LPPRI+++RRD + +E D Y SLY++S+ ++N++V+ G V+NNYA+IF L+TR+RQ DHP LV+ +R N D +C +CND AE+P+ + C H FC+ C+ ++ S ++CP C L++DL+ A + L FK SI++R+ ++ +Q+STKIEAL EE+ + + K IVFSQFTS LDL+++ L ++ + V+L GSMS RD IK F + C+ Sbjct: 300 RKNGLFKQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVNNLKTQKRWCLSGTPLQNRIGEMYSLIRFLNINPFTKYFCTKCDCASKDWKFTDRMHCDHCSHVIMQHTNFFNHFMLKNIQKFGVEGPGLESFNNIQ-TLLKNIMLRRTKVERADDLGLPPRIVTVRRDFFNEEEKDLYRSLYTDSKRKYNSFVEEGVVLNNYANIFTLITRMRQLADHPDLVL------KRLNNFPGDDIG--VVICQLCNDEAEEPIESKCHHKFCRLCIKEYVESFMENNNKLTCPVCHIGLSIDLSQPA-----LEVDLDSFKKQSIVSRLNMSGKWQSSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCE 690 HSP 2 Score: 107.071 bits (266), Expect = 1.951e-22 Identity = 60/159 (37.74%), Postives = 88/159 (55.35%), Query Frame = 3 Query: 540 VDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRK 1016 V DL + + S + I LL +Q E L W + QE+S GG+LADEMGMGKTIQ IAL++ DL + +LV+ P VA+ QW +EI++ T +G K+ +YHGA+R ++K YD V+TTY+++E+ +RK Sbjct: 159 VFTDLKNAPPYVPQRSKQPDGMTIKLLPFQLEGLHWLISQEESIYAGGVLADEMGMGKTIQTIALLM----------------------NDLTK-SPSLVVAPTVALMQWKNEIEQHT-KGQLKIYIYHGASRTTDIKDLQGYDVVLTTYAVLESVFRK 293
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: SM3L3_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS=Arabidopsis thaliana GN=At5g43530 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.734e-51 Identity = 124/417 (29.74%), Postives = 200/417 (47.96%), Query Frame = 3 Query: 1317 GKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAG---------------------------NIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTE 2474 S+ H + W RI+LDEAH +K + AKA L S +W L+GTPLQN++ +LYSL+ FL + P+ ++ WW+K + P Y NG+ R + L+K IL+ ++LRRTK+ R + L LPP + + E D+Y +L+ S+ QF+ +V G V++NYA+I +LL RLRQ +HP+LV+ + + Q A ++ R+ + + C IC + A+DPV+T CAH C+ CL+ S CP C +L +T L + SI + +++ S+K+ L + + + + K IVFSQ+TSFLDL++ L + + ++ G ++ R+ +K F E Sbjct: 807 ANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWC-----------------------------NWAWWSKLIQKP---YENGD--PRGLKLIK-AILRPLMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVSQNAPSRAYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRSPSCGLCPICRTIL-------------KRTELISCPTDSIFRVDVVKNWKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNE 1175 HSP 2 Score: 79.7221 bits (195), Expect = 8.062e-14 Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 675 KGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRC----------TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFM 1022 +GGILAD MG+GKT+ IAL+LA+ + E + + + I TL+ICP+ +SQW E++ + + VLVY+G +R + K + +D V+TTY ++ + Y++ M Sbjct: 681 RGGILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYGVLTSAYKQDM 806
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: SM3L2_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arabidopsis thaliana GN=At5g22750 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.849e-50 Identity = 130/418 (31.10%), Postives = 203/418 (48.56%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTK-----KGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVV-------YS-------------STAAQRAGN----------IVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTED 2477 +++V+W RI+LDEAH +K+ + + A +L + +W L+GTP+QN + +LYSL+RFL+I P+ + WWNK V P + G + L ILK I+LRRTK +GR L LPP + + E D+Y++L+ S+ +F+ +V+ G V++NYA I +LL RLRQ DHP+LV+ YS S+ +R G +V R ++ C IC + ED V+T CAH C+ CL+ + + CP C + SK L + S ++ S+KI AL EE+ + R +K I+FSQ+T+FLDL++ L +++ V+L G++S R+ +K F+ED Sbjct: 562 IYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTW-----------------------------AWWNKLVQKPFEE------GDERGLKLVQSILKPIMLRRTKSSTDREGRPI-LVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGLEREGKDVPSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVCRNTV-------------SKQELITAPTESRFQVDVEKNWVESSKITALLEELEGL--RSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSED 928 HSP 2 Score: 75.485 bits (184), Expect = 1.372e-12 Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 3 Query: 675 KGGILADEMGMGKTIQAIALVLAKRQVLHTIGE--PNVSSQTAGSST--DL--PRIRCT---------------------LVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEY 1010 +GGILAD MG+GKT+ I+L+LA + G PN SS+ DL P ++ T L++CP+ + QW +EI+ GS V V++G +R K+ K S+ D VITTY ++ +E+ Sbjct: 413 RGGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVVITTYGVLTSEF 551
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: HLTF_HUMAN (Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 2.186e-44 Identity = 124/405 (30.62%), Postives = 196/405 (48.40%), Query Frame = 3 Query: 1314 EGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTK----KGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN---------------IVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLID-FSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468 +G S LHS++W R+ILDE H +++ KAVL LES +W L+GTP+QN + +L+SL+ FL++ P+ +D WW++ + P+ G G R + ++KNI LRRTK KG+ L LP R + ++ T+ +E Y+S+ +E +A Y GTV+ +YA + LL RLRQ H YL+ + ++ +GN ++ +D+E C IC D PV+T CAHVFCK C+ + CP C + D + ++ + K KS ++ +S+KI AL + + +++ + K +V SQFT+FL LI+ L S +L GSM+ R +I+ F Sbjct: 541 KGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKDLWSLLSFLKLKPF------------IDRE-----------------WWHRTIQRPVTMGDEG--GLRRL----QSLIKNITLRRTKTSKIKGKPV-LELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLLTNAVSSNGPSGNDTPEELRKKLIRKMKLILSSGSDEE--CAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPPEELARDSEK--KSDM--------EWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCF 897
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_GIBZE (DNA repair protein RAD5 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RAD5 PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 3.813e-43 Identity = 130/437 (29.75%), Postives = 206/437 (47.14%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV-------------------------------VYSSTA----AQRAGNIVNGD------RNDDEQVCGIC-NDPAEDPVVTACAHVFCKACLIDF-SASLGNVSCPSC--------SRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTE 2474 L S+++ RII+DEAH +K+R T+KA + + ++WAL+GTP+ N++ +L+SLVRFL + P++ +F +W ++ P + +G+ RA+ +++ +L+ +VLRRTK + D + LPP+ I + + E D Y ++++++ F+ V+AGTVM + IF + RLRQ+ HP LV + S TA A + N G R++ E C +C +P D VT C H CK CL+D+ P C R L + + D SK K L R+ +N +S K+ AL E+R + K +VFSQFTSFL LI+ +L +++IK ++L GSM+ AR A + FTE Sbjct: 656 LFSLRFFRIIIDEAHHIKNRSSKTSKACYEISATHRWALTGTPIVNKLEDLFSLVRFLGVEPWN-----------------------------NFSFWRTFITVP---FESGDF-MRALDVVQ-TVLEPLVLRRTKDMKTPDGEPLVLLPPKQIEIVNVELSETERDVYNYIFNKAKRTFSQNVEAGTVMKAFTTIFAQILRLRQSCCHPILVRNRDIVADEVEAGAAADAAAGLADDMDLESLITSFTAVTDKASKESNQTFGAHALEQIRDEAENECPLCFEEPMNDQTVTGCWHSACKKCLLDYIKHQTDKAEVPRCFSCREPINKRDLFEVVRHDDDSDMMSK------KPRISLQRVGVN--ASSAKVVALMSELRALRREHPKMKSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEFTE 1050 HSP 2 Score: 74.3294 bits (181), Expect = 3.227e-12 Identity = 57/198 (28.79%), Postives = 94/198 (47.47%), Query Frame = 3 Query: 477 QPLMWEVWEQEHEKW----IDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALV--------LAKRQVLHTIGEPNVSSQTAGSSTDLPRIRC-TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQF-------SEYDFVITTYSIVEAEY 1010 +PLM +WEQ +W +DEN ++ + V + D S D + ++ + GGILADEMG+GKTIQ ++LV L RQ + N ++ +S + C TLV+ P+ +SQW SE ++ + G+ K +Y+G + N++ + D VIT+Y +V +E+ Sbjct: 461 EPLMHPLWEQY--EWPLKDVDENDLPQIEGQSKFYVNPYSGDLSLDFPV----------------QEQHCLGGILADEMGLGKTIQMLSLVHTHRSEVALEARQSVVARSNVNQLTRLGKNSESILDAPCTTLVVAPMSLLSQWQSEAEKASKDGTMKTELYYGNEKSSNLQALCCASNAANAPDLVITSYGVVLSEF 640
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: HLTF_MOUSE (Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 4.157e-43 Identity = 126/402 (31.34%), Postives = 192/402 (47.76%), Query Frame = 3 Query: 1323 SLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTK----KGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVV--YSSTAAQRAGN-------------IVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLID-FSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468 S LHS+KW R+ILDE H +++ KAVL LE+ +W L+GTP+QN + +L+SL+ FL++ P+ +D WW + + P+ G G R + ++KNI LRRTK KG+ L LP R + ++ T+ +E Y+S+ +E +A Y GTV+ +YA + LL RLRQ H +L+ SS+ R+ I+ +D+E C IC D PV+T CAHVFCK C+ + + CP C + D N + K SS+ ++++S+KI AL + + +D + K +V SQFT+FL LI+ L S +L GSM+ R +I+ F Sbjct: 538 SPLHSIKWLRVILDEGHAIRNPNAQQTKAVLELEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPF------------IDRE-----------------WWYRIIQRPVTTGDEG--GLRRL----QSLIKNITLRRTKTSKIKGKPV-LELPERKVFIQHITLSEEERKIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHLLTNGMSSSGPSRSDTPEELRKMLIEKMKIILSSGSDEE--CAICLDSLTFPVITHCAHVFCKPCICQVIHSEQPHAKCPLCRNEIHGD---NLLECPPEELACDSDKESSM-------EWKSSSKINALMHALIELRTKDPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRF 891
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: HLTF_RABIT (Helicase-like transcription factor OS=Oryctolagus cuniculus GN=HLTF PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 5.752e-43 Identity = 121/403 (30.02%), Postives = 193/403 (47.89%), Query Frame = 3 Query: 1314 EGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTK----KGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDR-------------NDDEQVCGICNDPAEDPVVTACAHVFCKACLID-FSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468 +G S LHS++W R+ILDE H +++ KAVL LE+ +W L+GTP+QN + +L+SL+ FL++ P+ +D WW++ + P+ G G R + ++KNI LRRTK KG+ L LP R + ++ T+ +E Y+S+ SE +A Y GTV+ +YA + LL RLRQ H +L+ + +++ +GN + + ++ C IC D PV+T CAHVFCK C+ + CP C + D N + K S++ ++ +S+KI AL + + ++ + K +V SQFT+FL LI+ L S +L GSM+ R +I+ F Sbjct: 538 KGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFLKLKPF------------VDRE-----------------WWHRTIQRPVTMGDEG--GLRRL----QSLIKNITLRRTKTSKIKGKPV-LELPERPVFIQHITLSDEERKIYQSVKSEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTNTVSSSGPSGNDTPEELRKKLIKKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQCIQNEQPHAKCPLCRNDIHGD---NLLECPPEELACDSEKKSNM-------EWTSSSKINALMHALIDLRTKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCF 894
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_EMENI (DNA repair protein rad5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rad5 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.968e-40 Identity = 133/457 (29.10%), Postives = 197/457 (43.11%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYL----VVYSSTAAQRAGNIVNGDRNDDEQV------------------------------------------CGICN-DPAEDPVVTACAHVFCKACLIDFSASLGNVS----CPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSI-------------LNRIQLNDF-------QTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTE 2474 L SV + R+ILDEAH +K+RR TA+A L++ ++W L+GTP+ NR+ +L+SLVRFL++ P++ +F +W ++ P + + E+ + I + +L+ +VLRRTK + + + LP R I + + + +E + Y +Y+ ++ FN+ V AGT++ +Y+ IF L RLRQ HP L + + A + D DD + C IC+ +P DP VTAC H CK CL D+ + C SC L QS TT SSI RI L TS KI AL + +V K +VFSQFTSFLDLI L K+ I V+L G+M+ AR + FT+ Sbjct: 643 LFSVDFFRVILDEAHIIKNRRSKTARACYDLKATHRWVLTGTPIVNRLEDLFSLVRFLRVEPWN-----------------------------NFSFWKTFITAPFE---SKEVVR--AISVVQTVLEPLVLRRTKSMKTPEGEPLVPLPKRTIRIEKVELIEQEREIYNHIYTRAKQTFNSNVAAGTLLKSYSTIFAQLLRLRQTCCHPILTRNKAIVADEEDAAAAADQDSDLKDDMDLQELINRFTATTSDAESSNEPPDPSMKFTAHALRQIQTESAGECPICSEEPMIDPAVTACWHSACKGCLKDYIQHQRDKGVQPRCFSCRADLNPQDIFEVVRYQSPNTTPTEQTPSSIGGDNVYSSSQPPPPPRISLRRINPLSPSAHTSAKIHAL---LAHLVRVPAGTKSVVFSQFTSFLDLIGPQLTKAGISFVRLDGTMAQKARAEVLAQFTK 1062 HSP 2 Score: 73.1738 bits (178), Expect = 7.106e-12 Identity = 40/118 (33.90%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 678 GGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQF------SEYDFVITTYSIVEAEYR 1013 GGILADEMG+GKTI+ ++LV + R + T N++ S +P TLV+ P+ ++QW E + + GS KVL+Y+G + N+++ + + ++T+Y +V +E+R Sbjct: 512 GGILADEMGLGKTIEMLSLVHSHRNLPPTQSLGNLTRLPV--SGVVPAPYTTLVVAPMSLLAQWEGEALKASRNGSMKVLMYYGNEKNVNLREMCSAGNAAAPNMILTSYGVVMSEHR 627
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_CRYNB (DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=RAD5 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.922e-38 Identity = 122/448 (27.23%), Postives = 201/448 (44.87%), Query Frame = 3 Query: 1314 EGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIV------NGDRN-----------------------------------DDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGN----VSCPSCS--------------RLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468 EG SL + ++ RI+LDEAH +++R +KA L+ +WAL+GTP+ NR+ +LYSL+ FL+I P+ Y ++ +V P + + +A+ ++++ IL++ +LRR K R D + LPP+ + ++ E Y+ L ++ +F G M+NY I +L +LRQ VDHP LV+ S G + NG+ N +D +C +C++ D V+ C H C+ C++++ + + SCPSC R V+ T+A G + ++ L ++ D TSTK+ AL ++ + + D AK +VFSQFTSFLDLI+ +L K I+ ++ G+MS A R I+ F Sbjct: 673 EGGSL-YDHEFLRIVLDEAHNIRNRLAMVSKACYELKGQRRWALTGTPIVNRLEDLYSLLHFLRITPWGNY-----------------------------SFFRSFVTVPFLNQDH-----KALNVVQY-ILESCLLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFIELDADGRAMSNYTSILAMLMKLRQCVDHPLLVLGKSGEDGELGEKILESGAGNGEGNLRDMIAMYAGGIRAETPDDVDKAYAAKVLKELGEQEDTPICELCSNEMFDEVLLPCYHRSCQDCIVEWIGTCEDQNKIASCPSCGKGPIKLADLRSVQRRHKRVNPITDAYPGGRDPNSKSSNDTTVTLGKV---DLVTSTKLRALLRQLEEIRQEDPKAKALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEF 1081 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0000197 ID=g.arboreum_cottongen_reftransV1_0000197; Name=g.arboreum_cottongen_reftransV1_0000197; organism=Gossypium arboreum; type=contig; length=2490bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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