g.arboreum_cottongen_reftransV1_0000197, g.arboreum_cottongen_reftransV1_0000197 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0B0PDD3_GOSAR (ATP-dependent helicase rhp16 OS=Gossypium arboreum GN=F383_06284 PE=4 SV=1) HSP 1 Score: 1512.66 bits (3915), Expect = 0.000e+0 Identity = 786/786 (100.00%), Postives = 786/786 (100.00%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRASKKKAKHNKEDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 1 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRASKKKAKHNKEDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 786
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2NCC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1) HSP 1 Score: 1502.65 bits (3889), Expect = 0.000e+0 Identity = 777/786 (98.85%), Postives = 781/786 (99.36%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MQLRSRKRTSNFS NEEHSDSSDQADNFIQLDDLSDSETYV SSDSDLGEEEILDLNHKAVK APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN+VNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLD+IKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 1 MQLRSRKRTSNFSANEEHSDSSDQADNFIQLDDLSDSETYVPSSDSDLGEEEILDLNHKAVKPAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 786
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2SGI5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1) HSP 1 Score: 1502.26 bits (3888), Expect = 0.000e+0 Identity = 777/786 (98.85%), Postives = 781/786 (99.36%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MQLRSRKRTSNFS NEEHSDSSDQADNFIQLDDLSDSETYV SSDSDLGEEEILDLNHKAVK APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN+VNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLD+IKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 1 MQLRSRKRTSNFSANEEHSDSSDQADNFIQLDDLSDSETYVPSSDSDLGEEEILDLNHKAVKPAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 786
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2RL38_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1) HSP 1 Score: 1496.1 bits (3872), Expect = 0.000e+0 Identity = 776/786 (98.73%), Postives = 780/786 (99.24%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MQLRSRKRTSNFS NE HSDSSDQADNFIQLDDLSDSETYV SSDSDLGEEEILDLNHKAVK APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN+VNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLD+IKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 1 MQLRSRKRTSNFSANE-HSDSSDQADNFIQLDDLSDSETYVPSSDSDLGEEEILDLNHKAVKPAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 785
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2NCD2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1) HSP 1 Score: 1441.4 bits (3730), Expect = 0.000e+0 Identity = 748/756 (98.94%), Postives = 752/756 (99.47%), Query Frame = 3 Query: 222 LDDLSDSETYVRSSDSDLGEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 LDDLSDSETYV SSDSDLGEEEILDLNHKAVK APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN+VNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLD+IKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 72 LDDLSDSETYVPSSDSDLGEEEILDLNHKAVKPAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 827 HSP 2 Score: 80.1073 bits (196), Expect = 2.526e-19 Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 2 Query: 2 KSTITTPHIPAAQSPISFSLTDHSSSFNRELNVKFTPFTSSFPNAA 139 KSTITTPHIPAAQS ISFSLTDHSSSF+RELNVKFTP TSS P + Sbjct: 13 KSTITTPHIPAAQSLISFSLTDHSSSFHRELNVKFTPLTSSLPKCS 58 HSP 3 Score: 44.669 bits (104), Expect = 2.526e-19 Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 1 Query: 124 LPKCSFDRVKGPPTSLPM 177 LPKCSFDRVKGPPTSLPM Sbjct: 54 LPKCSFDRVKGPPTSLPM 71
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2PSQ5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1) HSP 1 Score: 1412.51 bits (3655), Expect = 0.000e+0 Identity = 731/738 (99.05%), Postives = 735/738 (99.59%), Query Frame = 3 Query: 276 GEEEILDLNHKAVKAAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXXXRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 GEEEILDLNHKAVK APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN+VNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLD+IKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 4 GEEEILDLNHKAVKPAPITISDFTEPPTNRGNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 741
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A061ECV1_THECC (Helicase protein with RING/U-box domain isoform 1 OS=Theobroma cacao GN=TCM_011915 PE=4 SV=1) HSP 1 Score: 1327 bits (3433), Expect = 0.000e+0 Identity = 688/796 (86.43%), Postives = 724/796 (90.95%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKA--------APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXX-XRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MQLR RKRTSN ++NEE SDSSD+AD+FIQLDDLSD E YV SSDSD GE EI DLNHK + A APIT+SDF EP TNR N EQ +EQNE +DF VS+ KKRNN KRKKK ARSG LMWEVWEQEHEKWIDENLT DVDLDQQNAVITETS+AS DLIIPLLRYQKEWLAWALKQEDS TKGGILADEMGMGKTIQAIALVLAKR++L TI EPN SS T SSTDLP IR TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHG NRGKN+KQF +YDFVITTYSIVEAEYRK+MMPPKEKCPYCGKSF+QKKLSVHLKYYCGPDA+KTE QSKQERKK KS+FKS ++H SNYE D RK A KKK+KHN+EDKD DFEFD+T AG EH+LP+GKSLLHSVKWERIILDEAHFVKDRRCNTAKAVL+LESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQC CPHNSVRHFCWWNKYVATPIQ GNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRI+SLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTA+QRAG+IVN D+N+DEQVCGIC+DP E+PVVTACAHVFCKACLIDFSASLG VSCPSCSRLLTVDLTT AD GGQSS+TTLKGFKSSSILNRIQLNDFQTSTKIEALREEI MVERDGSAKGIVFSQFTSFLDLI YSLHKS I CVQLVGSMS+AARDAAIK FTEDPDCK Sbjct: 1 MQLRPRKRTSNPASNEEPSDSSDKADDFIQLDDLSDQEIYVPSSDSDQGEVEIFDLNHKPMTATAVSHLAFAPITVSDFAEPSTNRSNAEQQSTEQNEGDYDFYVSSRKKRNNVKRKKKKARSGPLLMWEVWEQEHEKWIDENLTADVDLDQQNAVITETSEASPDLIIPLLRYQKEWLAWALKQEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSSTDLPMIRGTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAEYRKYMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQERKKSKSVFKSDREHTSNYETDMRKGAGKKKSKHNEEDKDLDFEFDDTFAGVEHSLPQGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCGICHDPTEEPVVTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSILNRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSMAARDAAIKRFTEDPDCK 796
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A061EIX6_THECC (Helicase protein with RING/U-box domain isoform 3 OS=Theobroma cacao GN=TCM_011915 PE=4 SV=1) HSP 1 Score: 1323.53 bits (3424), Expect = 0.000e+0 Identity = 688/796 (86.43%), Postives = 724/796 (90.95%), Query Frame = 3 Query: 132 MQLRSRKRTSNFSTNEEHSDSSDQADNFIQLDDLSDSETYVRSSDSDLGEEEILDLNHKAVKA--------APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXX-XRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MQLR RKRTSN ++NEE SDSSD+AD+FIQLDDLSD E YV SSDSD GE EI DLNHK + A APIT+SDF EP TNR N EQ +EQNE +DF VS+ KKRNN KRKKK ARSG LMWEVWEQEHEKWIDENLT DVDLDQQNAVITETS+AS DLIIPLLRYQKEWLAWALKQEDS TKGGILADEMGMGKTIQAIALVLAKR++L TI EPN SS T SSTDLP IR TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHG NRGKN+KQF +YDFVITTYSIVEAEYRK+MMPPKEKCPYCGKSF+QKKLSVHLKYYCGPDA+KTE QSKQERKK KS+FKS ++H SNYE D RK A KKK+KHN+EDKD DFEFD+T AG EH+LP+GKSLLHSVKWERIILDEAHFVKDRRCNTAKAVL+LESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQC CPHNSVRHFCWWNKYVATPIQ GNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRI+SLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTA+QRAG+IVN D+N+DEQVCGIC+DP E+PVVTACAHVFCKACLIDFSASLG VSCPSCSRLLTVDLTT AD GGQSS+TTLKGFKSSSILNRIQLNDFQTSTKIEALREEI MVERDGSAKGIVFSQFTSFLDLI YSLHKS I CVQLVGSMS+AARDAAIK FTEDPDCK Sbjct: 1 MQLRPRKRTSNPASNEEPSDSSDKADDFIQLDDLSDQEIYVPSSDSDQGEVEIFDLNHKPMTATAVSHLAFAPITVSDFAEPSTNRSNAEQQSTEQNEGDYDFYVSSRKKRNNVKRKKKKARSGPLLMWEVWEQEHEKWIDENLTADVDLDQQNAVITETSEASPDLIIPLLRYQKEWLAWALKQEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSSTDLPMIRGTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAEYRKYMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQERKKSKSVFKSDREHTSNYETDMRKGAGKKKSKHNEEDKDLDFEFDDTFAGVEHSLPQGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCGICHDPTEEPVVTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSILNRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSMAARDAAIKRFTEDPDCK 796
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A0D2REP5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137100 PE=4 SV=1) HSP 1 Score: 1300.8 bits (3365), Expect = 0.000e+0 Identity = 662/668 (99.10%), Postives = 666/668 (99.70%), Query Frame = 3 Query: 486 MWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 MWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR SKKKAKHN+EDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQCP CPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGN+VNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLD+IKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK Sbjct: 1 MWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 668
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Match: A0A061EB75_THECC (Helicase protein with RING/U-box domain isoform 2 OS=Theobroma cacao GN=TCM_011915 PE=4 SV=1) HSP 1 Score: 1244.57 bits (3219), Expect = 0.000e+0 Identity = 641/725 (88.41%), Postives = 672/725 (92.69%), Query Frame = 3 Query: 321 APITISDFTEPPTNRGNGEQILSEQNESQFDFNVSXXXXXXXXXXXXX-XRSGQPLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERXXXXXXXXXXXXHASNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNAD-GGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 APIT+SDF EP TNR N EQ +EQNE +DF VS+ KKRNN KRKKK ARSG LMWEVWEQEHEKWIDENLT DVDLDQQNAVITETS+AS DLIIPLLRYQKEWLAWALKQEDS TKGGILADEMGMGKTIQAIALVLAKR++L TI EPN SS T SSTDLP IR TLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHG NRGKN+KQF +YDFVITTYSIVEAEYRK+MMPPKEKCPYCGKSF+QKKLSVHLKYYCGPDA+KTE QSKQERKK KS+FKS ++H SNYE D RK A KKK+KHN+EDKD DFEFD+T AG EH+LP+GKSLLHSVKWERIILDEAHFVKDRRCNTAKAVL+LESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDC+TLDYSSSTQC CPHNSVRHFCWWNKYVATPIQ GNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRI+SLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTA+QRAG+IVN D+N+DEQVCGIC+DP E+PVVTACAHVFCKACLIDFSASLG VSCPSCSRLLTVDLTT AD GGQSS+TTLKGFKSSSILNRIQLNDFQTSTKIEALREEI MVERDGSAKGIVFSQFTSFLDLI YSLHKS I CVQLVGSMS+AARDAAIK FTEDPDCK Sbjct: 12 APITVSDFAEPSTNRSNAEQQSTEQNEGDYDFYVSSRKKRNNVKRKKKKARSGPLLMWEVWEQEHEKWIDENLTADVDLDQQNAVITETSEASPDLIIPLLRYQKEWLAWALKQEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSSTDLPMIRGTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAEYRKYMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQERKKSKSVFKSDREHTSNYETDMRKGAGKKKSKHNEEDKDLDFEFDDTFAGVEHSLPQGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCGICHDPTEEPVVTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSILNRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSMAARDAAIKRFTEDPDCK 736
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_CRYNJ (DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=RAD5 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 8.276e-38 Identity = 122/448 (27.23%), Postives = 200/448 (44.64%), Query Frame = 3 Query: 1314 EGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIV------NGDRN-----------------------------------DDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGN----VSCPSCS--------------RLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468 EG SL + ++ RI+LDEAH +++R +KA L+ +WAL+GTP+ NR+ +LYSL+ FL+I P+ Y ++ +V P + + +A+ ++++ IL++ +LRR K R D + LPP+ + ++ E Y+ L ++ +F G M+NY I +L +LRQ VDHP LV+ S G + NG+ N +D +C +C++ D V+ C H C+ C++++ + + SCPSC R V+ T+A G ++ L ++ D TSTK+ AL ++ + + D AK +VFSQFTSFLDLI+ +L K I+ ++ G+MS A R I+ F Sbjct: 673 EGGSL-YDHEFLRIVLDEAHNIRNRLAMVSKACYELKGQRRWALTGTPIVNRLEDLYSLLHFLRITPWGNY-----------------------------SFFRSFVTVPFLNQDH-----KALNVVQY-ILESCLLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFIDLDADGRAMSNYTSILAMLMKLRQCVDHPLLVLGKSGEDGELGEKILESGAGNGEGNLRDMIAMYAGGIRAETPEDVDKAYAAKVLKELGEQEDTPICELCSNEMFDEVLLPCYHRSCQDCIVEWIGTCEDQNKIASCPSCGKGPIKLADLRSVQRRHKRVNPITDAYPGGRDPNLKSSNDTTVTLGKV---DLVTSTKLRALLRQLEEIRQEDPKAKALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEF 1081
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_NEUCR (DNA repair protein rad5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mus-41 PE=3 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 2.095e-37 Identity = 120/433 (27.71%), Postives = 197/433 (45.50%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV-----VYSSTAAQRAGNIVNGDRND---------------------------------DEQV--CGIC-NDPAEDPVVTACAHVFCKACLIDFSASLGNVS----CPSCSRLLTV----DLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468 L S+ + R+ILDEAH +K+R+ T++A + + ++W L+GTP+ NR+ +L+SLVRFL++ P++ +F +W ++ P + RA+ +++ +L+ +V+RRTK + D + LPP+ I + + E Y+ +++ ++ +QAGTVM + IF + RLRQ+ HP LV + A A ++ G +D DE V C IC +P D VT C H CK CL+D+ + + C C + + ++ + D ++S T + L R+ ND +S KI AL +R + + K +V SQFTSFL LI +L + I ++L GSMS AR A + F Sbjct: 724 LFSLNFFRVILDEAHNIKNRQAKTSRACYEIAAEHRWVLTGTPIVNRLEDLFSLVRFLRVEPWN-----------------------------NFSFWRTFITVPFESKN----FVRALDVVQ-TVLEPLVMRRTKDMKTPDGQFLVPLPPKHIEIVDIELSEPERAVYDYVFNRAKRTLFDNMQAGTVMKAFTSIFAQILRLRQSCCHPVLVRNQEILADEEEANMAADVAAGLADDMDLQTLIERFTATTDDASKTNNNFGAHVLRQIRDEAVNECPICAEEPMIDQAVTGCWHSACKKCLLDYIKHQTDRNEVPRCFQCREHINIRDIFEVIRHDDDLETSSTPGASPEPRISLQRVGAND--SSAKIVALISHLRTLRQEHPKMKSLVISQFTSFLSLISSALTRHKISFLRLDGSMSQKARAAVLTEF 1120 HSP 2 Score: 69.707 bits (169), Expect = 8.676e-11 Identity = 42/149 (28.19%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 639 LAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSST--DLPRIR-------------CTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQF-------SEYDFVITTYSIVEAEYRKF 1019 L+ +++ + GGILADEMG+GKTIQ ++L+ + R E + ++ AG ++ +LPR+ TLV+ P+ ++QW SE + + G+ K ++Y+GA + ++ + D +IT+Y +V +E+ + Sbjct: 569 LSLDFPKQEQHCLGGILADEMGLGKTIQMLSLIHSHR------SEVAIKAREAGPTSVNNLPRLPTVSGQKTTIDAPCTTLVVAPMSLLAQWQSEAENASKEGTFKTMMYYGAEKNVDLVTMCCEANAANAPDVIITSYGVVLSEFTQL 711
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: YG42_SCHPO (Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC23E6.02 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.474e-37 Identity = 127/438 (29.00%), Postives = 197/438 (44.98%), Query Frame = 3 Query: 1341 KWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD---LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQV---------------CGICNDP-AEDPVVTACAHVFCKACLI-------DFSASLGNVSC-PSCS---------RLLTVDL---------TTNADGGQSSK--TTLKGFKSSSILNRIQLN--------DFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPDCK 2489 +W R+ILDEA +K+R A+ LES Y+W LSGTP+QN V E YSL++FL+I PYS D+SS ++ P +S N + P++ + +LK ++LRRTK + L LPP+ + E ++Y +L S +Q Q Y+Q GT+ +Y + LL RLRQA HP+L+V A + +R Q+ C +C D AE ++ C H C+ CL D + N + P CS RLL+ L +AD ++ + L + S+IL Q+ + TSTKIE ++ ++++ + K ++FSQF SFL+L + IK + G +S A R+ A+ +F DP+ + Sbjct: 532 EWYRVILDEAQTIKNRNTLAARGCCLLESTYRWCLSGTPMQNGVEEFYSLIKFLRIKPYS------------DWSSFSKDFTIPLSS-------NINTSAPMKRF--------------RGLLKAVLLRRTKNTKIDGKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYLQEGTITTHYGSLLVLLLRLRQACCHPWLIVAREAAVDDNDSFQAKNRAIYNQIYPEAVNRLKLIETLQCSLCMDVVAELLIIVPCGHFLCRECLTHVITSSEDMAKQTSNENISPKCSVCEEYIDTERLLSYALFRRYSGMAPIVDADNKLRTENISELLPKQYSNILENRQMGMKIFTDPKHWTTSTKIEKALNAVKEIIKKQPTDKILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEVDPNVR 936 HSP 2 Score: 92.4337 bits (228), Expect = 9.338e-18 Identity = 56/163 (34.36%), Postives = 90/163 (55.21%), Query Frame = 3 Query: 549 DLDQQ---NAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEI-DRFTSRGSTKVLVYHGANRGKNV-KQFSEYDFVITTYSIVEAEYRKFM 1022 DLD+Q + I E + A LI L+ +QKE L W + E+S+ KGGILAD+MG+GKT+QA+AL++ + P S ++ TL+I PV + QW +EI + V ++HG+++ + +Q YD V+TTY+++ E++ M Sbjct: 367 DLDEQLVNDPTIREGTPAG--LIPTLMEHQKEGLMWLKRLEESSKKGGILADDMGLGKTVQALALLVTR--------PPESKS-----------VKTTLIITPVSLLQQWHNEILTKIAPSHRPTVYIHHGSSKKHKIAEQLMSYDIVLTTYNVIAYEFKNKM 508
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_ASPFU (DNA repair protein rad5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rad5 PE=3 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.818e-36 Identity = 125/449 (27.84%), Postives = 196/449 (43.65%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQR--------------------------AGNIVNGD----------------RNDDEQVCGIC----NDPAEDPVVTACAHVFCKACLIDFSASLGNVSCP----SC-----SRLLTVDLTTNADGGQSSKTTLKGFKSSSILN---RIQLNDF-------QTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468 L SV + R+ILDEAH +K+RR TA+A L + ++W L+GTP+ NR+ +L+SLVRFLQ+ P++ +F +W ++ P + RA+ +++ +L+ +VLRRTK + + + LP R I + + +E + Y+ +++ ++ FN ++AGT++ +++ IF + RLRQ HP L + A + ++ N D R + G C +P DP VTAC H CK CL D+ + P SC SR + + + ++T L +S + RI L TS KI AL I + + K +VFSQFTSFLDLI L K+ I V+L G+M AR + F Sbjct: 693 LFSVDFFRVILDEAHVIKNRRSKTARACYELRATHRWVLTGTPIVNRLEDLFSLVRFLQVEPWN-----------------------------NFSFWKTFITVPFESKDY----VRALNVVQ-TVLEPLVLRRTKTMKTPEGEPLVPLPRRTIDIVEVELSEQEREIYDYIFTRAKRTFNDNIEAGTLLKSFSTIFAQILRLRQTCCHPILTRNKTIVADEEDAAATADAANELKDDMDLQELIDRFSASMENADTAEAQDPSAKFTTHALRQIQTESSGECPICSEEPMIDPAVTACWHSACKKCLEDYIRHQTDKGVPPRCFSCRAPVTSRDIFQVIRHQSPSSTPTETDLYSSTPASSPHPAPRISLRRIHPLSPSAHTSAKIHAL---INHLNRVPANTKSVVFSQFTSFLDLIGAQLTKAGISYVRLDGTMPQKARAEVLAEF 1104 HSP 2 Score: 85.1149 bits (209), Expect = 1.750e-15 Identity = 45/126 (35.71%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 678 GGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQ----TAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQF------SEYDFVITTYSIVEAEYRKFMM 1025 GGILADEMG+GKTI+ ++L+ + R V + P+ S++ + SS LP TLV+ P +SQW SE + + +G+ KVL+Y+G ++ N+++ + + +IT+Y +V +E R+ M Sbjct: 559 GGILADEMGLGKTIEMLSLIHSHRNVSPSRQGPSSSTELVRMPSSSSAILPAPNTTLVVAPTSLLSQWESEAMKASEQGTMKVLMYYGVDKSTNLQELCSAGNPAAPNIIITSYGVVLSESRQLAM 684
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_SCHPO (DNA repair protein rad8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rad8 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.265e-34 Identity = 115/430 (26.74%), Postives = 194/430 (45.12%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV----VYSST------AAQRAGNIVNGDRNDDEQV-------------------CGI-CNDPAEDPVVTACAHVFCKACL---IDFSASLGNVS--CPSCSRLLTVD-----LTTNADGGQSSKTTLKGFKSS-SILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPD 2483 L SV W R++LDE H +++R TAKA S+ S +W ++GTP+ N++ +LYSL++F++ P+ Y +W +V+ P Y + ++ K ++ IL+ +VLRRTK+ + + + LPP+ + + E Y+SLY+++++ N + AGT+ NY I LL RLRQA P L+ + S T + ++ +++N + + C I CN+P ++P++ C H C CL I + + C +C + +G QS T L G + NR+Q S K+ L ++R + K ++FSQFT+FLD+I L + + G+MS R A+++F DPD Sbjct: 645 LFSVHWFRVVLDEGHNIRNRESKTAKACHSISSQNRWVITGTPIVNKLDDLYSLIKFMRYEPWCNY-----------------------------TYWQTFVSLP---YQSKDVLKALNVV--QSILEFLVLRRTKETKDRNGNSIVTLPPKTVKIEYLDFSDSERKIYDSLYTKAKSTVNANIVAGTLFRNYTTILGLLLRLRQACCDPVLLSNMTINSETFDDFEFSVEQFNSLINQFVVTGKPIPSDILKIDTLKSFEALITECPICCNEPIQNPLLLNCKHACCGDCLSEHIQYQKRRNIIPPLCHTCRQPFNEQDVYKPFFVKNNGTQS--TLLVGEEVKWKYWNRLQ------SVKLNGLLGQLRQLTHSSEPEKVVIFSQFTTFLDIIADVLESEKMGYARFDGTMSQQMRSTALETFRNDPD 1032
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: YBMA_SCHPO (Uncharacterized ATP-dependent helicase C582.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC582.10c PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.183e-33 Identity = 116/402 (28.86%), Postives = 173/402 (43.03%), Query Frame = 3 Query: 1320 KSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKK---------GRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRN-----DDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSASLGNVSCPSCSRLLTVDLTTNADGGQ--SSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTED 2477 K L + W RIILDEAH +K++ +A A +L+ + +W L+GTPLQN V ELYSLV+FL I P++ D S W ++ P+ + KR +LL I+LRRTK G L L R++ + E D+Y +L + + +V +G + NY +I LL RLRQA +HP + + A N ++G N D+ V + N E + + FC C+ + C CSR + G Q + KT K K IL + L++ + + LR K I+FSQFT+FLD+I L K+ I V+ G M+ AR+ ++ D Sbjct: 370 KPSLFAFYWWRIILDEAHTIKNKSSKSALACCALQGINRWCLTGTPLQNNVDELYSLVKFLHINPFN------------DQSV-----------------WKDQISLPLCQGEENLVFKRLRMLLSV-----IMLRRTKTLLEANAGKDGTGGALKLSKRLVYKVICKFEESERDFYSNLARNMERTMSNFVNSGKLGKNYTNILCLLLRLRQACNHPQSLNFQFEQDVDAFNALDGAANTNKLASDQDVDDLAN-LLETVEIGSRKKSFCTICMAELPPDFHEKKCKDCSR----NFKELDKGIQDPNDKTLYKSSKIREILKILSLDEQEEDDTVRGLR-------------KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSD 719 HSP 2 Score: 92.8189 bits (229), Expect = 5.587e-18 Identity = 62/168 (36.90%), Postives = 90/168 (53.57%), Query Frame = 3 Query: 609 IPLLRYQKEWLAWALKQE---DSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKE-KCPYCGKSFHQKKLSVHLKYY 1100 I LL +Q + L W +E S+ GGILAD+MG+GKTIQ IAL+L+ H + + S I+ TLV+ P+ + QW SE+ ++ +VYHGA+R K +K EYD VITTY I+ +E+ + K P KS+ +KK S+ Y+ Sbjct: 231 IRLLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALILS-----HPLPKKKHS------------IKSTLVVAPLSLIKQWESEVQ---TKSKLTAIVYHGASRYKLLKVIHEYDVVITTYQILVSEWVSHNTTGTDGKSPTEAKSYEKKKPSLFAFYW 378
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_CANGA (DNA repair protein RAD5 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RAD5 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.157e-33 Identity = 110/438 (25.11%), Postives = 194/438 (44.29%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQ----------------------------AVDHPYLVVYSSTAAQRAGNIVNGDRN-----------DDEQV----CGICN-DPAE--DPVVTACAHVFCKACLIDFSASLGNVS----CPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHK----SSIKCVQLVGSMSLAARDAAIKSF 2468 + S+++ RIILDE H ++++ T+KAVL L S Y+W L+GTP+ NR+ +LYSLV+FL++ P+S +W +++ P + K+A ++ + I++ ++LRRTK+ + D + LPP+ I + + + K+ YE ++ F + +Q+G ++ Y+ I + RLRQ +VD L+ + N + + D Q+ C IC +P E VVT C HVFCK CL ++ S CP+C R + ++ + G S IL I + + K+ AL ++ + + + +VFSQF+S+LD+++ L++ + +K + G +SL R A ++ F Sbjct: 651 IFSIEFFRIILDEGHTIRNKSTITSKAVLELSSKYRWILTGTPIINRLDDLYSLVKFLKLEPWS-----------------------------QIGYWKQFITNPFEERN----FKQAFDVV-NAIMEPVLLRRTKQMKDTDGNPLVQLPPKEIVIEKLQLSKKQKLIYEEFLQRAEKTFRSGLQSGDLLKKYSTILVHILRLRQVCCDSNLIGTLDENDEDLSSGNNKLITESVDVKTLIPDTEEEEDEVPPFENDELDKLIESVEAKFIDSNQLIPVECSICTAEPIESSSAVVTECEHVFCKECLEEYGNFQKEKSLQQKCPNCRRDINLNRCLAFEKG-----------SDGILKLIHFDRKERPAKLNALIRHLQQLQDSSAGEQVVVFSQFSSYLDILESQLNEVYSSNKLKVYKFDGRLSLKERTAVLEDF 1043 HSP 2 Score: 70.0922 bits (170), Expect = 7.049e-11 Identity = 42/128 (32.81%), Postives = 69/128 (53.91%), Query Frame = 3 Query: 678 GGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAG-SSTDLPRI---------RCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGAN----RGKNVKQFSEYDFVITTYSIVEAEYRKF 1019 GGIL+DEMG+GKTI A++LVL + + HT + +++ SS D+ I + TL+I P+ ++QW E D+ + +Y+G N + +K+ + V+TTY IV+ E+ K Sbjct: 508 GGILSDEMGLGKTISALSLVLMRPKDEHTTSQSLFHQESSNLSSDDVIEIKEPERSYAYKTTLIIVPMSLLTQWRDEFDKVNNNAGLTCELYYGGNVSSLKSLLIKRKNPPTVVLTTYGIVQNEWTKL 635
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: YF2C_SCHPO (Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A2.12 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.099e-32 Identity = 119/447 (26.62%), Postives = 196/447 (43.85%), Query Frame = 3 Query: 1311 PEGKSLLHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKY---VATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLA---LPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSST----AAQRAGNIVNGDRNDD----EQV-------CGICNDPAEDPV-VTACAHVFCKACLIDF--------SASLGNVSCPSCSRLLTVDLTTNADGGQSSKTTLKGFKSSSI----------------LNRI----------QLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTEDPD 2483 P SLL + W RI+LDEAH +++R AK + L++ Y+W LSGTP+QN + E YSL++FL+I PY C W+ + ++ P++ Y +I + A+ L+ +L + V RRTK+ R +L LPP+ I + +E Y S +Q+ + Y ++ Y + L RLRQ HP+LV SS + + N+ N ++ D E++ C +C DP PV + C H C+ C+ S S CP C + D +A Q+ L K + NRI + +++++S+K+ R+ I ++ + K +V+SQF+ +L L+ + L +I+ V+ G+MS R ++ SF D D Sbjct: 381 PPACSLLET-SWYRIVLDEAHTIRNRDTLAAKCCVKLDAKYRWCLSGTPIQNHIDEFYSLLKFLRIKPY--------------------------------CVWSLFAKDISRPLKSY-RADIVEAALKRLR-ILLASTVFRRTKETRVNNLPIVNLPPKTIRTVSVNLLPEERALYNEQMSSAQSLVDNYFNNDHDLSRYGFLLVSLLRLRQFCCHPWLVKSSSLDNSFRIRDSENVRNACKSLDPLTIERIATLQDFNCSVCLDPCLAPVFIIPCGHFTCQECMSMLVGQKYGSSSTSTIIAKCPMCRGNIVQDSLVDATILQAIHGPLNSLKQLELDMNQSFSEQESIKLRWENRIDQMFTKKFGKRASEWKSSSKLNQARQTILDIIGSKRNEKILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNNDKD 792 HSP 2 Score: 75.8702 bits (185), Expect = 1.159e-12 Identity = 50/160 (31.25%), Postives = 83/160 (51.88%), Query Frame = 3 Query: 546 VDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAVSQWVSEID-RFTSRGSTKVLVYHGANRGKNVKQF--SEYDFVITTYSIVEAEYRK 1016 +DL +N + S+ L++ LL +Q E AW E S+ GG++AD+MG+GKTIQ IAL+L ++ S D P + L++ V + QW E+ + V ++HG+ + KN+ + S+YD V+TTYS++ E ++ Sbjct: 232 IDLQLKNEQV-----QSAGLLVSLLPHQVEGHAWMESMEQSSKCGGVMADDMGLGKTIQTIALLLTQK------------------SQD-PLRKTNLIVVSVALLHQWAEELSTKVHPSKKLSVYIHHGSTK-KNLDSYELSQYDVVLTTYSMLAYEMKQ 366
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_CANAL (DNA repair protein RAD5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RAD5 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.969e-30 Identity = 109/432 (25.23%), Postives = 189/432 (43.75%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRT---KKGRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDD----------------------------------EQVCGICND---PAEDPVVTACAHVFCKACL---IDFSASLGNVS-CPSC----SRLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCV--QLVGSMSLAARDAAIKSFTE 2474 L+SVK+ RIILDE H +++R TAK+V L+S KW L+GTP+ NR+ +LYSL +FL++ P++ +F +W +V P + +I + ++ IL+ I LRRT KK + LP + + + + + E Y+ + A F +++G ++ Y I + RLRQ H L+ A + I+ ++++D E C IC P + VVT CAH FC +C+ +DF L CP+C S+ + G + + + ++S+KI+AL ++ + + ++K IVFSQF+S+LD+I+ L +S + + + G +++ R ++SF + Sbjct: 583 LYSVKFFRIILDEGHNIRNRNTKTAKSVYELQSSRKWILTGTPIVNRLDDLYSLTKFLELDPWN-----------------------------NFSYWKTFVTLPFEQ---KKISQTLDVV--KSILEPIFLRRTKSQKKNGKPLVELPAKEVVIEQIKFNDDEEKLYQWFKDRAYASFAEGIKSGQLLRRYTQILTHILRLRQVCCHVDLI---GGAHEMDDEIIEAEQDEDMRKFLTSIKENQIRFANDTDVKEKMYNLYGKIKEENECSICTQVPIPYSEMVVTPCAHTFCLSCILEHLDFQKELKKEKLCPNCRSPISKYQLFRIRNQPTKGNEIRFHTQKDAPDYSFQLYLYDPNRSSSKIQALVRHLKALHSQSPNSKVIVFSQFSSYLDIIQSELKLASEEFIVFKFDGRLNMNDRTKLLESFNQ 977
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Match: RAD5_YEAST (DNA repair protein RAD5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD5 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.134e-30 Identity = 112/443 (25.28%), Postives = 198/443 (44.70%), Query Frame = 3 Query: 1329 LHSVKWERIILDEAHFVKDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLDYSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD----LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLV----------------VYSSTAAQRAGNIVNGDRNDD----EQV---------------------CGICNDPAED---PVVTACAHVFCKACLIDF-----SASLGNVSCPSCS------RLLTVDLTTNADGGQSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIK----YSLHKSSIKCVQLVGSMSLAARDAAIKSF 2468 L SV + RII+DE H +++R T+KAV++L+ KW L+GTP+ NR+ +LYSLV+FL++ P+ R +W +V+TP + K+A ++ + IL+ ++LRRTK+ + D + LPP+ + ++R + Y+ L +++ + + G ++ Y+ I + RLRQ HP L+ V T + V +R D+ E++ C IC D + T C H FC+ CL ++ S +LG + CP+C RLL + + TN++ S K + +S S+KI AL +E++ + + + ++FSQF+++LD+++ ++ K K + G +SL R + + F Sbjct: 670 LFSVNFYRIIIDEGHNIRNRTTVTSKAVMALQGKCKWVLTGTPIINRLDDLYSLVKFLELDPW-----------------------------RQINYWKTFVSTPFESKNY----KQAFDVV-NAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQDLLYKFLLDKAEVSVKSGIARGDLLKKYSTILVHILRLRQVCCHPGLIGSQDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQSLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLG-LKCPNCRNQIDACRLLAL-VQTNSN---SKNLEFKPYSPAS-----------KSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADF 1062 HSP 2 Score: 56.9954 bits (136), Expect = 7.565e-7 Identity = 38/128 (29.69%), Postives = 62/128 (48.44%), Query Frame = 3 Query: 675 KGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRI----------RCTLVICPVVAVSQWVSEIDRFTSRGSTKVLVYHGAN----RGKNVKQFSEYDFVITTYSIVEAEYRK 1016 KGGIL+DEMG+GKT+ A +LVL+ + + + S +LP + TL++ P+ ++QW +E + + VY+G N + K + V+TTY IV+ E+ K Sbjct: 526 KGGILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIENTAVSDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKTLLTKTKTPPTVVLTTYGIVQNEWTK 653 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0000197 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0000197 ID=g.arboreum_cottongen_reftransV1_0000197; Name=g.arboreum_cottongen_reftransV1_0000197; organism=Gossypium arboreum; type=contig; length=2490bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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