g.arboreum_cottongen_reftransV1_0006991, g.arboreum_cottongen_reftransV1_0006991 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0006991
Unique Name	g.arboreum_cottongen_reftransV1_0006991
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	839

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr7	chromosome	g.arboreum_cottongen_reftransV1_0006991:1..839 . Chr7:112483698..112485641 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy TrEMBL
Match: A0A078HNX6_BRANA (BnaC04g15310D protein OS=Brassica napus GN=BnaC04g15310D PE=3 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.188e-116
Identity = 166/210 (79.05%), Postives = 188/210 (89.52%), Query Frame = 1

Query:   16 QNQKVDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPVRVTP 645
            ++QK + LSDSQIADN+IGVIFAA DTTASVLTWLLKYLHD+ NLL+ V+REQ  +R++I E NRR+ W+DTR MPLTTRVIQETLR AS+LSFTFREAV+DVE++GY IPKGWKVLPLFR IHH  DFFP+PEKFDPSRFEV PKP TFMPFGNGVHSCPGSELAKLEML+LLHHLTT +RW+V G E+GIQYGPFPVPKKGL +RVTP
Sbjct:  274 KDQKRNGLSDSQIADNIIGVIFAATDTTASVLTWLLKYLHDHPNLLQEVSREQVCIRQKIKEENRRISWEDTRKMPLTTRVIQETLRAASVLSFTFREAVQDVEYDGYLIPKGWKVLPLFRRIHHSPDFFPEPEKFDPSRFEVAPKPYTFMPFGNGVHSCPGSELAKLEMLILLHHLTTSFRWEVEGGEEGIQYGPFPVPKKGLLIRVTP 483

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BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy TrEMBL
Match: A0A0D3C2T0_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 2.794e-116
Identity = 165/210 (78.57%), Postives = 188/210 (89.52%), Query Frame = 1

Query:   16 QNQKVDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPVRVTP 645
            ++QK + LSDSQIADN+IGVIFAA DTTASVLTWLLKYLHD+ N+L+ V+REQ  +R +I E NR + W+DTR MPLTTRVIQETLR AS+LSFTFREAV+DVEFEGY IPKGWKVLPLFR IHH ++FFP+PEKF+PSRFEV PKP TFMPFG+G HSCPGSELAKLEMLVLLHHLTT +RW+VVG E+GIQYGPFPVPKKGLP+RVTP
Sbjct:  269 KDQKRNGLSDSQIADNIIGVIFAATDTTASVLTWLLKYLHDHPNVLQEVSREQVCIREKIREENRGISWEDTRKMPLTTRVIQETLRAASVLSFTFREAVQDVEFEGYLIPKGWKVLPLFRRIHHSSNFFPEPEKFEPSRFEVAPKPYTFMPFGSGSHSCPGSELAKLEMLVLLHHLTTSFRWKVVGGEEGIQYGPFPVPKKGLPIRVTP 478

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BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy TrEMBL
Match: D7LKC0_ARALL (CYP707A2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481828 PE=3 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 4.890e-116
Identity = 163/210 (77.62%), Postives = 189/210 (90.00%), Query Frame = 1

Query:   16 QNQKVDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPVRVTP 645
            ++QK + LSDSQI+DN+IGVIFAA DTTASVLTWLLKYLHD+ NLL+ V+REQ G+R++I + NR + W+DTR MPLTTRVIQETLR AS+LSFTFREAV+DVEF+GY IPKGWKVLPLFR IHH ++FFP PEKFDPSRFEV  KP T+MPFGNGVHSCPGSELAKLEML+LLHHLTT +RW+V+G E+GIQYGPFPVPKKGLP+RVTP
Sbjct:  275 KDQKRNGLSDSQISDNIIGVIFAATDTTASVLTWLLKYLHDHPNLLQEVSREQVGIRQKIRKENRGISWEDTRKMPLTTRVIQETLRAASVLSFTFREAVQDVEFDGYLIPKGWKVLPLFRRIHHSSEFFPNPEKFDPSRFEVAQKPYTYMPFGNGVHSCPGSELAKLEMLILLHHLTTSFRWEVIGGEEGIQYGPFPVPKKGLPIRVTP 484

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy TrEMBL
Match: A0A078CJ65_BRANA (BnaC04g40260D protein OS=Brassica napus GN=BnaC04g40260D PE=3 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 5.793e-116
Identity = 165/210 (78.57%), Postives = 188/210 (89.52%), Query Frame = 1

Query:   16 QNQKVDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPVRVTP 645
            ++QK + LSDSQIADN+IGVIFAA DTTASVLTWLLKYLHD+ N+L+ V+REQ  +R +I E NR + W+DTR MPLTTRVIQETLR AS+LSFTFREAV+DVEFEGY IPKGWKVLPLFR IHH ++FFP+PEKF+PSRFEV PKP TFMPFG+G HSCPGSELAKLEMLVLLHHLTT +RW+VVG E+GIQYGPFPVPKKGLP+RVTP
Sbjct:  272 KDQKRNGLSDSQIADNIIGVIFAATDTTASVLTWLLKYLHDHPNVLQEVSREQVCIREKIREENRGISWEDTRKMPLTTRVIQETLRAASVLSFTFREAVQDVEFEGYLIPKGWKVLPLFRRIHHSSNFFPEPEKFEPSRFEVAPKPYTFMPFGSGSHSCPGSELAKLEMLVLLHHLTTSFRWKVVGGEEGIQYGPFPVPKKGLPIRVTP 481

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy TrEMBL
Match: V4MFT8_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10016581mg PE=3 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 2.609e-115
Identity = 164/210 (78.10%), Postives = 188/210 (89.52%), Query Frame = 1

Query:   16 QNQKVDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPVRVTP 645
            ++QK + LSDSQIADN+IGVIFAA DTTASVLTWLLKYLHD+ +LL+ V+ EQ G+R++I E NR + W+DTR MPLTTRVIQETLR AS+LSFTFREAV+DVE++GY IPKGWKVLPLFR IHH  DFFP+PEKFDPSRFEV PKP TFMPFGNGVHSCPGSELAKLEML+LLHHLTT +RW+V G ++GIQYGPFPVPKKGLP+RVTP
Sbjct:  276 KDQKRNGLSDSQIADNIIGVIFAATDTTASVLTWLLKYLHDHPDLLQEVSMEQVGIRQKIREENRGISWEDTRKMPLTTRVIQETLRAASVLSFTFREAVQDVEYKGYLIPKGWKVLPLFRRIHHSPDFFPEPEKFDPSRFEVAPKPYTFMPFGNGVHSCPGSELAKLEMLILLHHLTTSFRWEVEGGDEGIQYGPFPVPKKGLPIRVTP 485

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy Swiss-Prot
Match: ABAH2_ARATH (Abscisic acid 8'-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP707A2 PE=2 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 3.603e-120
Identity = 165/210 (78.57%), Postives = 191/210 (90.95%), Query Frame = 1

Query:   16 QNQKVDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPVRVTP 645
            ++QK + LSDSQIADN+IGVIFAA DTTASVLTWLLKYLHD+ NLL+ V+REQ  +R++I + NRR+ W+DTR MPLTTRVIQETLR AS+LSFTFREAV+DVE++GY IPKGWKVLPLFR IHH ++FFP PEKFDPSRFEV PKP T+MPFGNGVHSCPGSELAKLEML+LLHHLTT +RW+V+GDE+GIQYGPFPVPKKGLP+RVTP
Sbjct:  272 KDQKRNGLSDSQIADNIIGVIFAATDTTASVLTWLLKYLHDHPNLLQEVSREQFSIRQKIKKENRRISWEDTRKMPLTTRVIQETLRAASVLSFTFREAVQDVEYDGYLIPKGWKVLPLFRRIHHSSEFFPDPEKFDPSRFEVAPKPYTYMPFGNGVHSCPGSELAKLEMLILLHHLTTSFRWEVIGDEEGIQYGPFPVPKKGLPIRVTP 481

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy Swiss-Prot
Match: ABAH1_ARATH (Abscisic acid 8'-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP707A1 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.668e-104
Identity = 148/210 (70.48%), Postives = 171/210 (81.43%), Query Frame = 1

Query:    4 LLGDQNQKVDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPV 633
            LLG      ++L+D QIADN+IGVIFAA DTTASV++W+LKYL +N N+LEAVT EQ  +R++  E    L W DT+ MPLT+RVIQETLR ASILSFTFREAVEDVE+EGY IPKGWKVLPLFR IHH AD F  P KFDPSRFEV PKPNTFMPFGNG HSCPG+ELAKLEM +++HHLTTKY W +VG  DGIQYGPF +P+ GLP+
Sbjct:  249 LLGSFMGDKEELTDEQIADNIIGVIFAARDTTASVMSWILKYLAENPNVLEAVTEEQMAIRKDK-EEGESLTWGDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSNPGKFDPSRFEVAPKPNTFMPFGNGTHSCPGNELAKLEMSIMIHHLTTKYSWSIVGASDGIQYGPFALPQNGLPI 457

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy Swiss-Prot
Match: ABAH3_ARATH (Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis thaliana GN=CYP707A3 PE=1 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.258e-103
Identity = 150/210 (71.43%), Postives = 171/210 (81.43%), Query Frame = 1

Query:    4 LLGDQNQKVDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPV 633
            LLG   +    L+D QIADN+IGVIFAA DTTASVLTW+LKYL DN  +LEAVT EQ  +R++  E    L W+DT+ MPLT RVIQETLR A+ILSFTFREAVEDVE+EGY IPKGWKVLPLFR IHH AD F  P KFDPSRFEV PKPNTFMPFG+G+HSCPG+ELAKLE+ VL+HHLTTKYRW +VG  DGIQYGPF +P+ GLP+
Sbjct:  249 LLGSFMEDKAGLTDEQIADNIIGVIFAARDTTASVLTWILKYLADNPTVLEAVTEEQMAIRKDKKEGES-LTWEDTKKMPLTYRVIQETLRAATILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHNADIFSDPGKFDPSRFEVAPKPNTFMPFGSGIHSCPGNELAKLEISVLIHHLTTKYRWSIVGPSDGIQYGPFALPQNGLPI 457

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy Swiss-Prot
Match: ABAH1_ORYSJ (Abscisic acid 8'-hydroxylase 1 OS=Oryza sativa subsp. japonica GN=CYP707A5 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 4.593e-99
Identity = 145/216 (67.13%), Postives = 168/216 (77.78%), Query Frame = 1

Query:    4 LLGDQNQKVDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPVRVTPRN 651
            LLG      + L+D+QIADNVIGVIFAA DTTASVLTW++K+L D+  +L+AVT EQ  + +E   +   L W DTR M +T+RVIQET+R ASILSFTFREAVEDVE++GY IPKGWKVLPLFR IHH  D FP PEKFDPSRFEV PKPNTFMPFGNG HSCPG+ELAKLEMLVL HHL TKYRW     E G+Q+GPF +P  GLP+  T +N
Sbjct:  252 LLGSFVDGREALTDAQIADNVIGVIFAARDTTASVLTWMVKFLGDHPAVLKAVTEEQLQIAKEKEASGEPLSWADTRRMKMTSRVIQETMRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHNPDHFPCPEKFDPSRFEVAPKPNTFMPFGNGTHSCPGNELAKLEMLVLFHHLATKYRWSTSKSESGVQFGPFALPLNGLPMSFTRKN 467

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy Swiss-Prot
Match: ABAH1_ORYSI (Abscisic acid 8'-hydroxylase 1 OS=Oryza sativa subsp. indica GN=CYP707A5 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 4.593e-99
Identity = 145/216 (67.13%), Postives = 168/216 (77.78%), Query Frame = 1

Query:    4 LLGDQNQKVDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPVRVTPRN 651
            LLG      + L+D+QIADNVIGVIFAA DTTASVLTW++K+L D+  +L+AVT EQ  + +E   +   L W DTR M +T+RVIQET+R ASILSFTFREAVEDVE++GY IPKGWKVLPLFR IHH  D FP PEKFDPSRFEV PKPNTFMPFGNG HSCPG+ELAKLEMLVL HHL TKYRW     E G+Q+GPF +P  GLP+  T +N
Sbjct:  252 LLGSFVDGREALTDAQIADNVIGVIFAARDTTASVLTWMVKFLGDHPAVLKAVTEEQLQIAKEKEASGEPLSWADTRRMKMTSRVIQETMRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHNPDHFPCPEKFDPSRFEVAPKPNTFMPFGNGTHSCPGNELAKLEMLVLFHHLATKYRWSTSKSESGVQFGPFALPLNGLPMSFTRKN 467

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy Swiss-Prot
Match: ABAH4_ARATH (Abscisic acid 8'-hydroxylase 4 OS=Arabidopsis thaliana GN=CYP707A4 PE=2 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 6.668e-94
Identity = 134/210 (63.81%), Postives = 163/210 (77.62%), Query Frame = 1

Query:    4 LLGDQNQKVDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPV 633
            LL  +N+K   L+  QIADN+IGV+FAA DTTAS LTW+LKYLHD+  LLEAV  EQ+ +  E     + L W  TR+MPLT +VI E+LR ASI+SFTFREAV DVE++GY IPKGWKV+PLFR IHH   +F  PE FDPSRFEV PKPNTFMPFG+GVH+CPG+ELAKL++L+ LHHL + +RW+V G E GIQY PFP+P+ GLP 
Sbjct:  252 LLNFKNEKGRVLTQEQIADNIIGVLFAAQDTTASCLTWILKYLHDDQKLLEAVKAEQKAIYEENSREKKPLTWRQTRNMPLTHKVIVESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPKYFSNPEVFDPSRFEVNPKPNTFMPFGSGVHACPGNELAKLQILIFLHHLVSNFRWEVKGGEKGIQYSPFPIPQNGLPA 461

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy Swiss-Prot
Match: ABAH3_ORYSI (Abscisic acid 8'-hydroxylase 3 OS=Oryza sativa subsp. indica GN=CYP707A7 PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 2.106e-91
Identity = 131/197 (66.50%), Postives = 157/197 (79.70%), Query Frame = 1

Query:   37 LSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGL 627
            L+D Q+ADN+IGV+FAA DTTASVLTW++KYLHD+  LLEAV  EQ  +R         L W  TR M LT +VI E+LR ASI+SFTFREAV DVE++G+ IPKGWKV+PLFR IHH  D+F  P+KFDPSRF+V P+PNTFMPFGNGVH+CPG+ELAKLEMLVL+HHL T YRW++VG  D ++Y PFPVPK GL
Sbjct:  274 LTDEQVADNIIGVLFAAQDTTASVLTWIVKYLHDHPKLLEAVRAEQAAIRAANDGGRLPLTWAQTRSMALTHKVILESLRMASIISFTFREAVADVEYKGFLIPKGWKVMPLFRNIHHNPDYFQDPQKFDPSRFKVSPRPNTFMPFGNGVHACPGNELAKLEMLVLIHHLVTGYRWEIVGSSDEVEYSPFPVPKHGL 470

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy Swiss-Prot
Match: ABAH3_ORYSJ (Abscisic acid 8'-hydroxylase 3 OS=Oryza sativa subsp. japonica GN=CYP707A7 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 2.500e-91
Identity = 131/197 (66.50%), Postives = 157/197 (79.70%), Query Frame = 1

Query:   37 LSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGL 627
            L+D Q+ADN+IGV+FAA DTTASVLTW++KYLHD+  LLEAV  EQ  +R         L W  TR M LT +VI E+LR ASI+SFTFREAV DVE++G+ IPKGWKV+PLFR IHH  D+F  P+KFDPSRF+V P+PNTFMPFGNGVH+CPG+ELAKLEMLVL+HHL T YRW++VG  D ++Y PFPVPK GL
Sbjct:  274 LTDEQVADNIIGVLFAAQDTTASVLTWIVKYLHDHPKLLEAVRAEQAAIRAANDGGRLPLTWAQTRSMALTHKVILESLRMASIISFTFREAVADVEYKGFLIPKGWKVMPLFRNIHHNPDYFQDPQKFDPSRFKVSPRPNTFMPFGNGVHACPGNELAKLEMLVLIHHLVTGYRWEIVGSSDEVEYSPFPVPKHGL 470

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy Swiss-Prot
Match: ABAH2_ORYSI (Abscisic acid 8'-hydroxylase 2 OS=Oryza sativa subsp. indica GN=CYP707A6 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.135e-88
Identity = 129/204 (63.24%), Postives = 159/204 (77.94%), Query Frame = 1

Query:   28 VDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPVRV 639
            V  L+D QIADNV+GV+FAA DTTASVLTW+LKYLHD+  LLEAV  EQ  +        R L W  TR M LT +VI E+LR ASI+SFTFREAV DVE++G+ IPKGWKV+PLFR IHH  D+F  P+KFDPSRF+V P+P+TF+PFG+GVH+CPG+ELAKLEMLVL+H L T YRW++VG  D ++Y PFPVP+ GL  ++
Sbjct:  282 VALLTDDQIADNVVGVLFAAQDTTASVLTWILKYLHDSPKLLEAVKAEQMAIYVANEGGKRPLTWTQTRSMTLTHQVILESLRMASIISFTFREAVADVEYKGFLIPKGWKVMPLFRNIHHNPDYFQDPQKFDPSRFKVAPRPSTFLPFGSGVHACPGNELAKLEMLVLVHRLVTAYRWEIVGASDEVEYSPFPVPRGGLNAKL 485

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy Swiss-Prot
Match: ABAH2_ORYSJ (Abscisic acid 8'-hydroxylase 2 OS=Oryza sativa subsp. japonica GN=CYP707A6 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.585e-88
Identity = 129/204 (63.24%), Postives = 159/204 (77.94%), Query Frame = 1

Query:   28 VDQLSDSQIADNVIGVIFAAHDTTASVLTWLLKYLHDNGNLLEAVTREQEGVRREIIEANRRLMWDDTRHMPLTTRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRTIHHCADFFPKPEKFDPSRFEVPPKPNTFMPFGNGVHSCPGSELAKLEMLVLLHHLTTKYRWQVVGDEDGIQYGPFPVPKKGLPVRV 639
            V  L+D QIADNV+GV+FAA DTTASVLTW+LKYLHD+  LLEAV  EQ  +        R L W  TR M LT +VI E+LR ASI+SFTFREAV DVE++G+ IPKGWKV+PLFR IHH  D+F  P+KFDPSRF+V P+P+TF+PFG+GVH+CPG+ELAKLEMLVL+H L T YRW++VG  D ++Y PFPVP+ GL  ++
Sbjct:  286 VALLTDDQIADNVVGVLFAAQDTTASVLTWILKYLHDSPKLLEAVKAEQMAIYVANEGGKRPLTWTQTRSMTLTHQVILESLRMASIISFTFREAVADVEYKGFLIPKGWKVMPLFRNIHHNPDYFQDPQKFDPSRFKVAPRPSTFLPFGSGVHACPGNELAKLEMLVLVHRLVTAYRWEIVGASDEVEYSPFPVPRGGLNAKL 489

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A078HNX6_BRANA	1.188e-116	79.05	BnaC04g15310D protein OS=Brassica napus GN=BnaC04g...	[more]
A0A0D3C2T0_BRAOL	2.794e-116	78.57	Uncharacterized protein OS=Brassica oleracea var. ...	[more]
D7LKC0_ARALL	4.890e-116	77.62	CYP707A2 OS=Arabidopsis lyrata subsp. lyrata GN=AR...	[more]
A0A078CJ65_BRANA	5.793e-116	78.57	BnaC04g40260D protein OS=Brassica napus GN=BnaC04g...	[more]
V4MFT8_EUTSA	2.609e-115	78.10	Uncharacterized protein OS=Eutrema salsugineum GN=...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0006991 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
ABAH2_ARATH	3.603e-120	78.57	Abscisic acid 8'-hydroxylase 2 OS=Arabidopsis thal...	[more]
ABAH1_ARATH	1.668e-104	70.48	Abscisic acid 8'-hydroxylase 1 OS=Arabidopsis thal...	[more]
ABAH3_ARATH	1.258e-103	71.43	Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis thal...	[more]
ABAH1_ORYSJ	4.593e-99	67.13	Abscisic acid 8'-hydroxylase 1 OS=Oryza sativa sub...	[more]
ABAH1_ORYSI	4.593e-99	67.13	Abscisic acid 8'-hydroxylase 1 OS=Oryza sativa sub...	[more]
ABAH4_ARATH	6.668e-94	63.81	Abscisic acid 8'-hydroxylase 4 OS=Arabidopsis thal...	[more]
ABAH3_ORYSI	2.106e-91	66.50	Abscisic acid 8'-hydroxylase 3 OS=Oryza sativa sub...	[more]
ABAH3_ORYSJ	2.500e-91	66.50	Abscisic acid 8'-hydroxylase 3 OS=Oryza sativa sub...	[more]
ABAH2_ORYSI	4.135e-88	63.24	Abscisic acid 8'-hydroxylase 2 OS=Oryza sativa sub...	[more]
ABAH2_ORYSJ	4.585e-88	63.24	Abscisic acid 8'-hydroxylase 2 OS=Oryza sativa sub...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 49..69
None	No IPR available	PANTHER	PTHR24286	FAMILY NOT NAMED	coord: 1..215
None	No IPR available	PANTHER	PTHR24286:SF86	ABSCISIC ACID 8'-HYDROXYLASE 2	coord: 1..215
IPR001128	Cytochrome P450	PRINTS	PR00385	P450	coord: 163..174 score: 40.54 coord: 83..94 score: 37.55 coord: 154..163 score: 47.79 coord: 26..43 score: 35.49
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 5..192 e-value: 1.5E-51 score: 175.5
IPR001128	Cytochrome P450	GENE3D	1.10.630.10		coord: 6..215 e-value: 9.4E-61 score: 205.3
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 8..214
IPR002397	Cytochrome P450, B-class	PRINTS	PR00359	BP450	coord: 100..127 score: 30.79 coord: 163..174 score: 45.93 coord: 83..94 score: 31.3 coord: 154..163 score: 51.33 coord: 128..143 score: 31.25
IPR017972	Cytochrome P450, conserved site	PROSITE	PS00086	CYTOCHROME_P450	coord: 156..165

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0006991 ID=g.arboreum_cottongen_reftransV1_0006991; Name=g.arboreum_cottongen_reftransV1_0006991; organism=Gossypium arboreum; type=contig; length=839bp
GTTCTATTGGGTGACCAAAACCAAAAGGTTGATCAACTCAGTGATTCCCA
GATTGCAGATAATGTAATTGGTGTAATCTTTGCTGCTCATGATACCACTG
CAAGTGTCCTAACATGGCTGTTAAAATACTTGCATGACAATGGAAATTTA
CTAGAAGCTGTCACTAGAGAACAAGAAGGTGTTCGACGAGAAATAATCGA
AGCAAATCGCAGGCTTATGTGGGATGATACAAGGCACATGCCATTGACTA
CCAGGGTGATTCAAGAGACATTAAGAACAGCAAGTATTCTGTCATTCACC
TTCAGGGAAGCAGTGGAAGATGTTGAGTTTGAAGGCTATTACATCCCCAA
AGGTTGGAAGGTTCTTCCTCTCTTTAGAACCATTCATCATTGCGCGGATT
TCTTCCCTAAACCCGAGAAATTTGACCCTTCGAGATTCGAGGTACCGCCG
AAACCCAACACGTTTATGCCCTTTGGGAATGGAGTACACTCTTGTCCAGG
CAGTGAACTGGCCAAGCTTGAGATGTTGGTGCTCCTCCACCATCTCACCA
CAAAATACAGGTGGCAAGTTGTGGGAGATGAGGATGGAATCCAGTATGGT
CCCTTTCCAGTGCCCAAAAAGGGCTTACCTGTAAGGGTCACCCCAAGAAA
TATATAGGCACCATGAGCACAACAATACACCATTTCTGGATTTGGACTCA
AATGAAGATTTAACTTTTTTGGGGGGCTAAAAAGCCTATTGAGTTTTTCT
TTTTTCTCATTTTGGTTGTTTAATTTGTCTATGGGAATCTTTTGTAATTG
TTCAAAAGCTTTCTTGAGGAAGGGTTTTTTTTTTTTTTT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR001128	Cyt_P450
IPR002397	Cyt_P450_B
IPR017972	Cyt_P450_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	obsolete oxidation-reduction process

Search form

g.arboreum_cottongen_reftransV1_0006991, g.arboreum_cottongen_reftransV1_0006991 (contig) Gossypium arboreum

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