g.arboreum_cottongen_reftransV1_0002537, g.arboreum_cottongen_reftransV1_0002537 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0002537
Unique Nameg.arboreum_cottongen_reftransV1_0002537
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1378
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr1chromosomeg.arboreum_cottongen_reftransV1_0002537:1..1378 .
Chr1:84733707..84735250 -
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy TrEMBL
Match: A0A0D2SME5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G182700 PE=4 SV=1)

HSP 1 Score: 459.914 bits (1182), Expect = 2.093e-152
Identity = 225/336 (66.96%), Postives = 278/336 (82.74%), Query Frame = -3
Query:  198 QRGKRKQWERIEAYILQYGAELAPKRYSYSDIKRITKSFKDELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGDEFINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICHRESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMVGEKENIH---SQTSNSNFPVWIYNRLKEGADLNLEG--MTAENEELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSIEALTIPPTPFLFSPPRSPEN 1190
             +G + Q  RIEA+I ++G+ L P+RYSY++IK++T  F D+LGQGG+G+VYKG LS+ R VAVK+L+E+KG+G++F+NEVASISRTSHVN+V+ +GFC+E S RAL+YEFMP+GSLD+FI  R    +  QLE +TLY+IA+GIARGL+YLHQGCNTRILHFDIKPHNILLDE FCPKI+DFGL+KLCERK+SIIS   ARGTIGYIAPEV CR+FGGVS+KSDVYSYGMMVLEMVG ++NI    SQTS   FP WIY  L +  +LNL G  +  E EE+ RK+IIVSLWCIQS PSDRPSMTKVIEMLQ ++++L IPP PF+ SP RSP++
Sbjct:  296 NQGNKNQDGRIEAFIKKFGS-LTPRRYSYAEIKKMTNKFNDKLGQGGYGSVYKGKLSEDRFVAVKILSESKGNGEDFMNEVASISRTSHVNIVSLLGFCFERSKRALVYEFMPHGSLDRFIYDRRLHHQSCQLEWRTLYDIALGIARGLDYLHQGCNTRILHFDIKPHNILLDENFCPKIADFGLSKLCERKESIISMTCARGTIGYIAPEVVCRNFGGVSYKSDVYSYGMMVLEMVGGRKNIDVGVSQTSEVYFPSWIYKHLDQSMNLNLNGVILEEEEEEIARKLIIVSLWCIQSYPSDRPSMTKVIEMLQENLQSLIIPPRPFVSSPVRSPKS 630          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy TrEMBL
Match: A0A068UWV4_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_70 OS=Coffea canephora GN=GSCOC_T00037401001 PE=4 SV=1)

HSP 1 Score: 443.351 bits (1139), Expect = 2.260e-149
Identity = 218/346 (63.01%), Postives = 266/346 (76.88%), Query Frame = -3
Query:  186 RGILLKLQRGKRKQWERIEAYILQYGAELAPKRYSYSDIKRITKSFKDELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGDEFINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICHRESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMVGEKENIH---SQTSNSNFPVWIYNRLKEGADLNLEG-MTAENEELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSIEALTIPPTPFLFSPPRSPENTFTT 1211
            R ILL  +R  ++    +EA I QYG+ LAP+RYSYSDIKR+T SFKD+LG+GG+G VYKG L  GR VAVK+LN +KGSG+EFINEVASISRTSHVN+VA +GFC+E   RALIYEFMPNGSL+++I    +    G L    LY IA+GIARGLEYLH+GC  RILHFDIKPHNILLD+ FCPKISDFGLAKLC RK+S++S + ARGT+GYIAPEV CR+FG VS KSDVYSYGMM++EMVG ++N+    S TS   FP W Y  +    D  L+G MT E +E+ RKM++V LWCIQ++PS RP+++KVIEML+GS+EAL  PP PF  SP RSPE +  T
Sbjct:   41 RSILLLFKRTSKENL-ILEAAIKQYGS-LAPRRYSYSDIKRMTNSFKDKLGEGGYGKVYKGNLFAGRPVAVKILNTSKGSGEEFINEVASISRTSHVNIVALLGFCFEGQKRALIYEFMPNGSLERYIHGETTSKTDGHLGWAKLYQIALGIARGLEYLHRGCTMRILHFDIKPHNILLDDDFCPKISDFGLAKLCSRKESVVSMLEARGTVGYIAPEVICRNFGVVSPKSDVYSYGMMLMEMVGGRKNVSVKASHTSEIYFPHWAYQHMILEKDFKLKGVMTPEEDEIARKMVLVGLWCIQADPSQRPAVSKVIEMLEGSLEALEFPPKPFFGSPSRSPEASSIT 384          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy TrEMBL
Match: A0A0D2THA1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G183100 PE=4 SV=1)

HSP 1 Score: 451.44 bits (1160), Expect = 7.791e-149
Identity = 219/341 (64.22%), Postives = 273/341 (80.06%), Query Frame = -3
Query:  231 TFRIKNETLSRGILLKLQRGKRKQWERIEAYILQYGAELAPKRYSYSDIKRITKSFKDELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGDEFINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICHRESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMVGEKENIH---SQTSNSNFPVWIYNRLKEGADLNLEGMTAEN-EELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSIEALTIPPTP 1241
              R+K ++LS      L +GK+    RIE +I ++G+ LAP RY Y DIK++T  FKD+LG+GG+G+VYKG L DGRLVAVK+L+E K +G+EF+NEVASISRTSHVN+V  +GFC+E S RAL+YEFMPNGSLD FI ++   ++  QLE KTLYNIA+GIARGLEYLHQGCNTRILHFDIKPHNILLDE FCPKISDFGL+KLCERK+SII+    RGT+GYIAPEVFCR+FGGVSHKSDVYSYGMM+LEM+G ++NI    SQTS + FP WI N L +  + NL  + AE  EE+T+K+  VSLWC Q++P DRPS+T+V+EMLQGS+++L +PP P
Sbjct:  321 VLRLKGKSLSS----HLWKGKKNDNARIEEFITKFGS-LAPNRYFYGDIKKMTNKFKDKLGEGGYGSVYKGKLPDGRLVAVKILSEFKENGEEFMNEVASISRTSHVNIVTLLGFCFERSKRALVYEFMPNGSLDGFIYNKGPHNQSRQLEGKTLYNIALGIARGLEYLHQGCNTRILHFDIKPHNILLDENFCPKISDFGLSKLCERKESIIANTGTRGTVGYIAPEVFCRNFGGVSHKSDVYSYGMMLLEMIGGRKNIDIEGSQTSETYFPSWINNHLDQPMNFNLNEVIAEGEEEITKKLFTVSLWCTQTHPIDRPSITEVLEMLQGSLQSLVLPPKP 656          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy TrEMBL
Match: M1B5W8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014577 PE=3 SV=1)

HSP 1 Score: 446.817 bits (1148), Expect = 1.853e-147
Identity = 217/333 (65.17%), Postives = 264/333 (79.28%), Query Frame = -3
Query:  207 LKLQRGKRKQWERIEAYILQYGAELAPKRYSYSDIKRITKSFKDELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGDEFINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICH-RESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMVGEKENIHSQTSNSNFPVWIYNRLKEGADLNLEG-MTAENEELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSIEALTIPPTPFLFSPPRS 1199
            L+    + +    IEA++   G   AP RYSYSDIKR+T SFK++LGQGG+G VYKG+L +G  VAVKVLN  KGSG+EFINEV+SISRTSHVN+V+ VGFC+E   RAL+YEFMPNGSL+KFI   R   D   QL+ + LY IA+GIARGLEYLH+GCNTRILHFDIKPHNILLDE FCPKISDFGLAKLC +K+SI+S + ARGTIGYIAPE+ CR+ GGVSHKSDVYSYGMMVLEMVG ++N+  +TS   FP W+Y R++   +L L G M  E +E  RKM+IVSLWCIQ+ PS+RPSMTKV+EML+G++ +L IPPTP+L+S  RS
Sbjct:  274 LRFWESEAEDHRNIEAFLKNNGP-YAPMRYSYSDIKRMTSSFKNKLGQGGYGYVYKGSLHNGNPVAVKVLNGLKGSGEEFINEVSSISRTSHVNIVSLVGFCFEGRKRALVYEFMPNGSLEKFIYEERSDTDSVRQLDWQVLYKIALGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKLCVKKESIVSMLGARGTIGYIAPEIVCRNLGGVSHKSDVYSYGMMVLEMVGGRKNVVDRTSEVYFPDWLYQRIELDEELQLIGIMNEEEKECARKMVIVSLWCIQTGPSNRPSMTKVVEMLEGNLNSLQIPPTPYLYSSSRS 605          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy TrEMBL
Match: B9HWE8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s13100g PE=3 SV=2)

HSP 1 Score: 435.647 bits (1119), Expect = 2.948e-147
Identity = 209/330 (63.33%), Postives = 261/330 (79.09%), Query Frame = -3
Query:  183 IEAYILQYGAELAPKRYSYSDIKRITKSFKDELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGDEFINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICHRESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMVGEKENIHSQTSNSN---FPVWIYNRLKEGADLNLEGMTAENEEL-TRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSIEALTIPPTPFLFSPPRSPENTFTTS 1160
            +EA++  YG  LAPKRYSYS++K++TK+FK++LGQGG+G+V+KG L DGRLVAVKVL ++K +G+EF+NEV+SI  TSHVN+V  +GFC+E   RALIYEFM NGSLDK I          +L  +TLY IA+GIARGLEYLH+GCNTRILHFDIKPHNILLDE FCPKISDFGLAK+C  K+SI+S + ARGT GYIAPEVFCR+FGGVSHKSDVYSYGM+VLEM+G ++N      N++   FP WIY RL+ G +L L G   E EE   RKMI+ SLWCIQ++PS+RP M++V++MLQGS+E+L IPP P+L SPPR P  + + S
Sbjct:    1 MEAFLRNYGT-LAPKRYSYSELKKMTKNFKEKLGQGGYGSVFKGNLLDGRLVAVKVLKKSKSNGEEFVNEVSSIGMTSHVNIVTLLGFCFEGPKRALIYEFMSNGSLDKHIYEENLSKAQPKLGWETLYQIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKICPGKESIVSMLGARGTAGYIAPEVFCRNFGGVSHKSDVYSYGMLVLEMIGGRKNFRVGVDNTSEIYFPHWIYKRLEIGEELQLRGAGNEVEEQNARKMILASLWCIQTDPSNRPPMSRVVDMLQGSLESLPIPPKPYLSSPPRPPHGSNSNS 329          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy TrEMBL
Match: U5GCE4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15340g PE=3 SV=1)

HSP 1 Score: 434.106 bits (1115), Expect = 3.374e-146
Identity = 216/342 (63.16%), Postives = 260/342 (76.02%), Query Frame = -3
Query:  156 ERIEAYILQYGAELAPKRYSYSDIKRITKSFKDELGQGGFGTVYKGAL-SDGRLVAVKVLNEAKGSGDEFINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICHRESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMVGEKENIHSQTSNSN---FPVWIYNRLKEGADLNLEGMTAENE-ELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSIEALTIPPTPFLFSPPRSPENTFTTSFFAPSIQTE 1166
            + +E +++ Y + L PKRYSYSDIK++T SF + LGQGGFG VY+G L  DGRLVAVKVL E+KG G+EF+NEVASISRTSHVNVV  +GFCYE + RALIYEFMPNGSLD FI  + SP    +LE K LY IA+GIARGLEYLH+GCNTRI+HFDIKPHNILLD++FCPKISDFGLAKLC+ K S IS I ARGT+GYIAPEVFCRSFGGV++KSDVYSYGMMVLEMVG+ ++    +  +N   FP W Y  L+ G    L G T E E E+  KMI+V LWCIQ+ PS RPSMTKV+EM +GS+++L IPP P   SP RS +    T    P + ++
Sbjct:   12 DSVETFMMDYHS-LTPKRYSYSDIKKMTSSFANILGQGGFGYVYRGKLPDDGRLVAVKVLKESKGDGEEFMNEVASISRTSHVNVVTLLGFCYERNKRALIYEFMPNGSLDSFISDKGSPHTNCRLEWKKLYEIAVGIARGLEYLHRGCNTRIVHFDIKPHNILLDDEFCPKISDFGLAKLCQSKVSKISMIGARGTVGYIAPEVFCRSFGGVTYKSDVYSYGMMVLEMVGQSKDFDMGSLETNEMYFPDWFYMYLEPGKISTLHGGTTEEEKEIVEKMILVGLWCIQTIPSHRPSMTKVVEMFEGSLQSLQIPPRPSFSSPRRSAQEQSCTVSSLPCVSSQ 352          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy TrEMBL
Match: K4BX83_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc05g009090.1 PE=3 SV=1)

HSP 1 Score: 442.965 bits (1138), Expect = 6.381e-146
Identity = 216/333 (64.86%), Postives = 264/333 (79.28%), Query Frame = -3
Query:  207 LKLQRGKRKQWERIEAYILQYGAELAPKRYSYSDIKRITKSFKDELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGDEFINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICH-RESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMVGEKENIHSQTSNSNFPVWIYNRLKEGADLNLEG-MTAENEELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSIEALTIPPTPFLFSPPRS 1199
            L+    K +  + IEA++  YG   AP RYSYSDIKR+T SFK++LGQGG+G VYKG+L +G  VAVKVLN  KGSG+EFINEV+SISRTSHVN+V+ VGFC+E   RAL+YEFMPNGSL+KFI   R   D+  QL+ + LY IA+GIARGLEYLH+GCNTRILHFDIKPHNILLDE FCPKISDFGLAKLC +K+SI+S + ARGTIGYIAPE+ CR+ GGVSHKSDVYSYGMMVLEMVG ++N+  +TS   FP  +Y R++   +L L G M  E +E  RKM+IVSLWCIQ+ P++RPSMTKV+EML+G + +L IPPTP+L+S   S
Sbjct:  275 LRFWESKAEDHQNIEAFLKNYGP-YAPMRYSYSDIKRMTSSFKNKLGQGGYGYVYKGSLHNGNPVAVKVLNGLKGSGEEFINEVSSISRTSHVNIVSLVGFCFEGRKRALVYEFMPNGSLEKFIYQERSDTDRVRQLDWQVLYKIALGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKLCVKKESIVSMLGARGTIGYIAPEIVCRNLGGVSHKSDVYSYGMMVLEMVGGRKNVVDRTSEVYFPDLLYQRIELDEELQLIGIMNEEEKECARKMVIVSLWCIQTGPANRPSMTKVVEMLEGDLNSLQIPPTPYLYSSSSS 606          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy TrEMBL
Match: V4UW78_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011753mg PE=3 SV=1)

HSP 1 Score: 435.647 bits (1119), Expect = 9.466e-146
Identity = 219/344 (63.66%), Postives = 258/344 (75.00%), Query Frame = -3
Query:  183 LLKLQRGKRKQWERIEAYILQYGAELAPKRYSYSDIKRITKSFKDELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGDEFINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICHRESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMVGEKENIHSQTSNSN---FPVWIYNRLKEGADLNLEGMTAENE-ELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSIEALTIPPTPFLFSPPRSPENTFTTS 1202
            L +L+  K +     EA   +    LAPKRY+YSD+KRITKSF D+LGQGG+G VYKG L DGRLVAVKVL E+KG+G+EFINEVASISRTSHV++V F+GFCYE   RALIYEFMPNGSLD+F   +ES +    LE +T+Y IA GIARGLEYLH+GCN RI+HFDIKPHNILLDE FCPKISDFGLAK  + K S IS + ARGTIGYIAPEVFCRSFGG SHKSDVYSYGMM+LEM   ++N   + S S+   FP  IY  ++ G D  L+G+  E E EL +KMI+VSLWCIQ+NPSDRPSM KV+EML+G    L IPP P L  P +S   +  TS
Sbjct:   81 LRRLRNNKTENDRSAEAAFFRNYVSLAPKRYNYSDLKRITKSFSDKLGQGGYGDVYKGKLPDGRLVAVKVLKESKGNGEEFINEVASISRTSHVSIVTFLGFCYEKKKRALIYEFMPNGSLDQFTYDQESSNGNRTLEWRTVYQIAGGIARGLEYLHRGCNVRIVHFDIKPHNILLDEDFCPKISDFGLAKQSQDKKSTISMLHARGTIGYIAPEVFCRSFGGASHKSDVYSYGMMILEMAVGRKNADVKASRSSDIYFPNSIYKHIELGNDFQLDGVVTEEEKELVKKMILVSLWCIQTNPSDRPSMHKVLEMLEGRTGDLQIPPKPSLALPKKSAIQSSRTS 424          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy TrEMBL
Match: U7DZF1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0418s00210g PE=3 SV=1)

HSP 1 Score: 432.95 bits (1112), Expect = 9.932e-146
Identity = 216/353 (61.19%), Postives = 264/353 (74.79%), Query Frame = -3
Query:  210 IMTVTFRIKNETLSRGILLKLQRGKRKQWERIEAYILQYGAELAPKRYSYSDIKRITKSFKDELGQGGFGTVYKGAL-SDGRLVAVKVLNEAKGSGDEFINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICHRESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMVGEKENIHSQTSNSN---FPVWIYNRLKEGADLNLEGMTAENE-ELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSIEALTIPPTPFLFSPPR 1253
            I+T+    +  + S  I +  +  K +   R++ +++ Y + L P+RYSYS+IK++T SF   LGQGGFG VY+G L  DG LVAVKVL E+KG G+EF+NEVASISRTSHVNVV  +GFCYE + RALIYEFMPNGSLD FI ++ESP    +LE K LY IA+GIARGLEYLH+GCNTRI+HFDIKPHNILLDE FCPKISDFGLAKLC+ K S IS I ARGT+GYIAPEVFCR+FGGV++KSDVYSYGMMVLEMVG+ ++    +  +N   FP W Y  L  G      G T E E E+ +KMI+V LWCIQ+ PS RPSMTKV+EM +GS+++L IPP P L SP R
Sbjct:    5 IITIYLTRREGSFSAVIAMTFRLKKSQHVGRVKTFMMDYHS-LTPRRYSYSEIKKMTNSFVYTLGQGGFGNVYRGKLPDDGHLVAVKVLKESKGDGEEFMNEVASISRTSHVNVVTLLGFCYERNKRALIYEFMPNGSLDSFISNKESPHTNCRLEWKKLYEIAVGIARGLEYLHRGCNTRIVHFDIKPHNILLDEDFCPKISDFGLAKLCKSKVSKISMIGARGTVGYIAPEVFCRNFGGVTYKSDVYSYGMMVLEMVGQSKDFDMGSVETNELYFPDWFYMYLDPGEISTFHGGTTEEEKEIVKKMILVGLWCIQTMPSHRPSMTKVVEMFEGSLQSLQIPPRPSLSSPRR 356          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy TrEMBL
Match: U5GEI3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s07470g PE=3 SV=1)

HSP 1 Score: 442.58 bits (1137), Expect = 1.065e-145
Identity = 217/343 (63.27%), Postives = 270/343 (78.72%), Query Frame = -3
Query:  183 LKLQRGKRKQWERIEAYILQYGAELAPKRYSYSDIKRITKSFKDELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGDEFINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICHRESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMVGEKENIHSQTSNSN---FPVWIYNRLKEGADLNLEGMTAENEE-LTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSIEALTIPPTPFLFSPPRSPENTFTTS 1199
            L+  RG R     IE ++  YG  LAPKRYSYS++K++TK+FK++LGQGG+G+V+KG L DGRLVAVKVL +AK +G+EF+NEV+SIS+TSHVN+V  +GFC+  S RALIYEFM NGSLDK I          QL  +TLY IA+GIARGLEYLH+GCNTRILHFDIKP+NILLDE FCPKISDFGLAK+C RK+SI+S + ARGTIGYIAPEVFCR+FGGVSHKSDVYSYGM+VLEM+G ++N      N++   FP  IY RL+ G +L L+G   + EE + RKMI+ SLWCIQ++PS+RP M++V+EMLQGS+E+L IPP P L SPPRSP  + + S
Sbjct:  288 LRKTRGSRS----IEVFLRNYGT-LAPKRYSYSELKKMTKTFKEKLGQGGYGSVFKGNLPDGRLVAVKVLKKAKSNGEEFVNEVSSISQTSHVNIVTLLGFCFAGSKRALIYEFMSNGSLDKHIYEENLSKADHQLGWETLYQIAVGIARGLEYLHRGCNTRILHFDIKPNNILLDENFCPKISDFGLAKICPRKESIVSMMGARGTIGYIAPEVFCRNFGGVSHKSDVYSYGMLVLEMIGGRKNFCVGAGNTSEIYFPYLIYKRLELGEELGLQGTGNKVEEQIARKMILASLWCIQTDPSNRPPMSRVVEMLQGSLESLPIPPRPILSSPPRSPRGSISDS 625          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 7.991e-57
Identity = 125/298 (41.95%), Postives = 179/298 (60.07%), Query Frame = -3
Query:  264 KRYSYSDIKRITKSF--KDELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGDE--FINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICHRESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMV-GEKENIHSQTSNSNFPV---WIYNRLKEG-----ADLNLEGMTAENEELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQG 1118
            KR+S  +++  +  F  K+ LG+GGFG VYKG L+DG LVAVK L E +  G E  F  EV  IS   H N++   GFC   + R L+Y +M NGS+    C RE P     L+  T   IA+G ARGL YLH  C+ +I+H D+K  NILLDE+F   + DFGLAKL + KD+ ++T + RGTIG+IAPE    S G  S K+DV+ YG+M+LE++ G++    ++ +N +  +   W+   LKE       D +L+    E E    ++I V+L C Q +P +RP M++V+ ML+G
Sbjct:  288 KRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS--CLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEYL--STGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERE--LEQVIQVALLCTQGSPMERPKMSEVVRMLEG 578          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 9.087e-57
Identity = 128/321 (39.88%), Postives = 184/321 (57.32%), Query Frame = -3
Query:  261 RIEAYILQYGAELAP-------KRYSYSDIKRITKSF--KDELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGDE--FINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICHRESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMV-GEKENIHSQTSNSN---FPVWIYNRLKEG-----ADLNLEGMTAENEELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGS 1163
            +++ + L   AE  P       KR+S  ++   T+ F  ++ LG+G FG +YKG L+D  LVAVK LNE +  G E  F  EV  IS   H N++   GFC   + R L+Y +M NGS+    C RE P+    L+     +IA+G ARGL YLH  C+ +I+H D+K  NILLDE+F   + DFGLAKL    DS ++T + RGTIG+IAPE    S G  S K+DV+ YG+M+LE++ G+K    ++ +N +      W+   LKE       D  LEG   E E    ++I ++L C QS+  +RP M++V+ ML+G 
Sbjct:  239 KLQGHFLDVPAEEDPEVYLGQFKRFSLRELLVATEKFSKRNVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS--CLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTT-AVRGTIGHIAPEYL--STGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETE--VEQLIQMALLCTQSSAMERPKMSEVVRMLEGD 552          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3)

HSP 1 Score: 204.527 bits (519), Expect = 1.094e-56
Identity = 130/350 (37.14%), Postives = 192/350 (54.86%), Query Frame = -3
Query:  183 LQRGKRKQWERIEAYILQYGAELAPKRYSYSDIKRITKSF--KDELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGD-EFINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICHRESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMV-GEKENIHSQTSNSN------FPVWIYNRLKEGADLNLEGMTAENEELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSIEALTIPPTPFLFSPPR---SPENTFTTS 1193
            L R  RK +    A+           +  Y  I+  T  F   +++GQGGFG VYKG LSDG  VAVK L+++ G G+ EF NEV  +++  H N+V  +GFC +   R L+YE++PN SLD F+     P K GQL+    Y I  G+ARG+ YLHQ     I+H D+K  NILLD    PKI+DFG+A++     +  +T    GT GY++PE      G  S KSDVYS+G++VLE++ G+K +   QT  ++      + +W   R  E  D  +      NE +  + + + L C+Q +P++RP+++ ++ ML  +   L +P  P LF   R    P +T TTS
Sbjct:  309 LTRRARKSYYTPSAFAGDDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLF---DPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMH--GQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVV--RCVHIGLLCVQEDPAERPTLSTIVLMLTSNTVTLPVPRQPGLFFQSRIGKDPLDTDTTS 651          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy Swiss-Prot
Match: Y4960_ARATH (Putative receptor-like protein kinase At4g00960 OS=Arabidopsis thaliana GN=At4g00960 PE=3 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 1.205e-56
Identity = 120/314 (38.22%), Postives = 180/314 (57.32%), Query Frame = -3
Query:  219 RYSYSDIKRITKSFK--DELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGD-EFINEVASISRTSHVNVVAFVGFCYEISIRALIYEFMPNGSLDKFICHRESPDKPGQLEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKL--CERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMV-GEKENIHSQTSNSNFPV-WIYNRLKEGADLNL--------EGMTAENEELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSIEALTIPPTPFLFS 1115
            +  +  I+  T  F   + LG+GGFG VYKG L  G  +AVK L+   G GD EF+NEV+ +++  H N+V  +GFC++   R LIYEF  N SL+KFI      D+   L+ +  Y I  G+ARGL YLH+  + +I+H D+K  N+LLD+   PKI+DFG+ KL   ++    + T    GT GY+APE +  S G  S K+DV+S+G++VLE++ G+K N   +  +S F + +++   +EG  LN+         G++ E     RK I + L C+Q NP  RP+M  ++ ML  +   L  P  P  +S
Sbjct:   43 QLDFDTIRLATNDFSPYNHLGEGGFGAVYKGVLDSGEEIAVKRLSMKSGQGDNEFVNEVSLVAKLQHRNLVRLLGFCFKGEERLLIYEFFKNTSLEKFIF---DSDRRMILDWEKRYRIISGVARGLLYLHEDSHFKIIHRDMKASNVLLDDAMNPKIADFGMVKLFNTDQTSQTMFTSKVAGTYGYMAPE-YAMS-GQFSVKTDVFSFGVLVLEIIKGKKNNWSPEEQSSLFLLSYVWKCWREGEVLNIVDPSLIETRGLSDE----IRKCIHIGLLCVQENPGSRPTMASIVRMLNANSFTLPRPLQPAFYS 347          
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.985e-56
Identity = 123/324 (37.96%), Postives = 179/324 (55.25%), Query Frame = -3
Query:  258 RIEAYILQYGAELAPKRYSYSDIKRITKSFKDELGQGGFGTVYKGALSDGRLVAVKVLNEAKGSGDEFINEVASISRTSHVNVVAFVGFCYEISI---RALIYEFMPNGSLDKFICHRESPDKPGQ-------LEVKTLYNIAIGIARGLEYLHQGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCERKDSIISTISARGTIGYIAPEVFCRSFGGVSHKSDVYSYGMMVLEMVGEKENIHSQTSNSN-------FPVWIYNRLKEG-----ADLNLEGMTAENEELTRKMIIVSLWCIQSNPSDRPSMTKVIEMLQGSI 1163
            RIE   L+  A + P ++   D++  T  F+  +G+GG G+V+KG L DG  VAVK +   +    EF +EVA+I+   H N+V   G+    S    R L+Y+++ N SLD +I     PD+  +       L  +  Y +AI +A+ L YLH  C ++ILH D+KP NILLDE F   ++DFGL+KL  R +S + T   RGT GY+APE       G+S KSDVYSYG+++LEM+G + +I               FP  +  +++E       D  L  +   +EE   K++ V+LWCIQ     RP MT VIEML+G +
Sbjct:   77 RIEYSFLRKVAGV-PTKFKLEDLEEATDGFRSLIGKGGSGSVFKGVLKDGSQVAVKRIEGEEKGEREFRSEVAAIASVQHKNLVRLYGYSSSTSANRPRFLVYDYIVNSSLDIWIF----PDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRVLT-DIRGTRGYLAPEWLLEH--GISEKSDVYSYGIVLLEMIGGRRSISRVEVKETKKKKLEYFPRIVNQKMRERKIMEIVDQRLIEVNEVDEEEVMKLVCVALWCIQEKSKKRPDMTMVIEMLEGRV 392          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2SME5_GOSRA2.093e-15266.96Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A068UWV4_COFCA2.260e-14963.01Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
A0A0D2THA1_GOSRA7.791e-14964.22Uncharacterized protein OS=Gossypium raimondii GN=... [more]
M1B5W8_SOLTU1.853e-14765.17Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
B9HWE8_POPTR2.948e-14763.33Uncharacterized protein OS=Populus trichocarpa GN=... [more]
U5GCE4_POPTR3.374e-14663.16Uncharacterized protein OS=Populus trichocarpa GN=... [more]
K4BX83_SOLLC6.381e-14664.86Uncharacterized protein OS=Solanum lycopersicum GN... [more]
V4UW78_9ROSI9.466e-14663.66Uncharacterized protein OS=Citrus clementina GN=CI... [more]
U7DZF1_POPTR9.932e-14661.19Uncharacterized protein OS=Populus trichocarpa GN=... [more]
U5GEI3_POPTR1.065e-14563.27Uncharacterized protein OS=Populus trichocarpa GN=... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0002537 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
SERK1_ARATH7.991e-5741.95Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
SERK5_ARATH9.087e-5739.88Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
CRK10_ARATH1.094e-5637.14Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
Y4960_ARATH1.205e-5638.22Putative receptor-like protein kinase At4g00960 OS... [more]
Y5005_ARATH4.985e-5637.96Probable receptor-like protein kinase At5g20050 OS... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 294..314
NoneNo IPR availableGENE3D1.10.510.10coord: 146..346
e-value: 4.6E-42
score: 142.9
NoneNo IPR availableGENE3D3.30.200.20coord: 84..145
e-value: 1.9E-21
score: 75.6
NoneNo IPR availablePANTHERPTHR27009:SF21PR5-LIKE RECEPTOR KINASE-RELATEDcoord: 1..386
NoneNo IPR availablePANTHERPTHR27009FAMILY NOT NAMEDcoord: 1..386
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..388
IPR000719Protein kinase domainSMARTSM00220serkin_6coord: 70..340
e-value: 7.8E-36
score: 135.0
IPR000719Protein kinase domainPFAMPF00069Pkinasecoord: 73..338
e-value: 2.5E-48
score: 164.6
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 70..355
score: 38.054
IPR013320Concanavalin A-like lectin/glucanase domainGENE3D2.60.120.200coord: 6..83
e-value: 1.4E-7
score: 30.8
IPR017441Protein kinase, ATP binding sitePROSITEPS00107PROTEIN_KINASE_ATPcoord: 76..98
IPR008271Serine/threonine-protein kinase, active sitePROSITEPS00108PROTEIN_KINASE_STcoord: 193..205
IPR011009Protein kinase-like domainSUPERFAMILY56112Protein kinase-like (PK-like)coord: 53..340

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0002537 ID=g.arboreum_cottongen_reftransV1_0002537; Name=g.arboreum_cottongen_reftransV1_0002537; organism=Gossypium arboreum; type=contig; length=1378bp
ACTATATTCACTAAAGACATTTGTGTTCAGCATACTAAAAGATAATCAAA
TACTAAAAACTATGTACTAGCCAAAGTTAATGGGGTTCATTCACATCTAT
ATATCACACACGCTATTAAATTTTATACACTGGTAGTTGAAATAAATGCA
CTGTACTCCGTCTGAATGGATGGTGCAAAAAATGATGTTGTGAAGGTGTT
TTCCGGTGATCTTGGAGGAGAAAACAGGAACGGCGTTGGCGGAATCGTCA
GAGCTTCAATGCTTCCTTGCAACATTTCTATAACTTTAGTCATCGATGGT
CGATCCGACGGATTACTTTGAATGCACCACAAACTCACTATGATCATCTT
TCTAGTTAGTTCTTCATTTTCAGCTGTCATTCCTTCCAGGTTCAAATCTG
CTCCTTCTTTAAGACGGTTGTAAATCCATACCGGAAAATTCGAGTTACTA
GTCTGACTATGAATGTTTTCTTTTTCTCCGACCATTTCGAGGACCATCAT
CCCATAGCTGTAAACATCGGACTTGTGGGAGACTCCTCCAAAGCTCCTGC
AGAATACTTCTGGAGCAATGTATCCGATAGTTCCTCTAGCACTTATCGTG
GAAATGATACTATCTTTCCGCTCACATAGTTTAGCAAGTCCGAAATCTGA
AATTTTAGGACAAAACTTTTCATCTAGAAGGATATTGTGAGGTTTTATGT
CGAAGTGTAGAATCCTTGTATTACAACCTTGATGCAAGTATTCCAATCCT
CTGGCTATTCCAATTGCGATGTTATACAATGTTTTCACTTCTAACTGTCC
AGGTTTATCAGGAGATTCTCGATGACAGATGAACTTATCCAATGATCCAT
TCGGCATGAATTCGTAGATTAGAGCTCTTATTGATATCTCATAGCAGAAA
CCTACAAATGCCACTACATTAACATGGGAAGTCCTGCTAATGCTAGCCAC
TTCATTTATAAATTCATCTCCACTTCCCTTGGCTTCATTTAGGACTTTAA
CGGCAACAAGTCGACCATCGGATAATGCACCTTTATATACAGTTCCGAAT
CCACCTTGACCTAGTTCGTCTTTGAACGACTTGGTTATTCTCTTGATGTC
TGAATATGAATATCGCTTGGGAGCAAGTTCGGCACCATACTGCAAAATGT
ATGCCTCGATCCTTTCCCATTGCTTCCTTTTTCCTCGTTGCAACTTCAAT
AAAATACCTCTCGACAACGTCTCGTTCTTAATCCGGAAAGTTACTGTCAT
AATGACGACTACAAAAACAACAGCCCCAGCCACTCCCAAGCCTAAGGCTA
ATTTGAACTTTGGAGTGAAACCATCTGATGACCCCGAGATGGAATCATCA
TCCCATTCCACTCCAAAGCCATTTTGAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR013320ConA-like_dom_sf
IPR017441Protein_kinase_ATP_BS
IPR008271Ser/Thr_kinase_AS
IPR011009Kinase-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004672protein kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation