g.arboreum_cottongen_reftransV1_0008189, g.arboreum_cottongen_reftransV1_0008189 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: M1B6M3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014784 PE=4 SV=1) HSP 1 Score: 462.611 bits (1189), Expect = 5.153e-154 Identity = 331/498 (66.47%), Postives = 407/498 (81.73%), Query Frame = -1 Query: 140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633 MADEEER LE QLE+QL EQ+++L +L +AL+SDP +P++L+V EELV+ IK+TEEGLL+LKRARLL E D++L+ + E ++ +E EPL D Y VGSKCRFR +DGRWY+G +V L GS AK+ F TPTSENM++C+FFLQQRCRFG++CRLSHG+D+P+SSLKKY P W+ S+ GS IWA DSK G+W++AEL SW+++L G +VF DDGSSA LG E + LSE+A+ +D+EES SEESDSSDYEE+SP+GLGF+EST+LQ+G+QTETT+FAKWENHTRG+AS+MMANMGYREGMGLGASGQGM+NPI VKVLPPK SLDHA++ ++ E ++KK KKRSRGGKRKREKKFA AARAAKE EESRPDVFSLIN QLA+ E +N + +++ K GEEKK DR+ALVAYDDE+K L+++ KLEEMV RNRNEK VYEAAMRKL ETRKA+A AEA HASASNAV SKEKEK+WLKF Sbjct: 1 MADEEERALEEQLEIQLDEQKDALHSLTEALSSDPSDPELLSVREELVQSIKDTEEGLLHLKRARLLLEVDASLHGFKEQTAEVEVEPLDPTE-IEAEPLV-DEEYAVGSKCRFRNNDGRWYNGLIVGLEGSHFAKVCFRTPTSENMVMCQFFLQQRCRFGSSCRLSHGIDIPISSLKKYIPMKWDSSLAGSCIWARSDSKAGLWKKAELGSWDEKLNLGHIVFCDDGSSATLGAENIELSEHAEATDEEESYSGSEESDSSDYEEDSPEGLGFVESTSLQRGVQTETTLFAKWENHTRGIASRMMANMGYREGMGLGASGQGMVNPIPVKVLPPKQSLDHAIK-NQKAEHEDKKHKKRSRGGKRKREKKFAAAARAAKEVEESRPDVFSLINTQLAVHEETMNNSTGNRRRSKAKGEEKKEDRRALVAYDDEIKGLRIQAQKLEEMVQRNRNEKPVYEAAMRKLNETRKAIATAEAAHASASNAVHSKEKEKRWLKF 495
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: V7BN85_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G047900g PE=4 SV=1) HSP 1 Score: 459.529 bits (1181), Expect = 6.927e-153 Identity = 333/500 (66.60%), Postives = 404/500 (80.80%), Query Frame = -1 Query: 140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEP-LEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDED-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633 M EEERVLENQLELQL+EQR+SLSA+D AL SDP N ++LAVHEELV+ IK+ EEGL +LKRARLL+EAD+ L+ +N + + D +VEP L E++ + VGSKCRFR+ +GRWY+GQVV L+ S AK+SFLTPTSENML+CKFFLQQRCRFG++CRLSHGVDV LS+LKK+ PT+WE S+VGSSIWAV + G WREAELESW+++ G+VVFRDDGS+ +LG E + LSE+A++SD E + S E+E +GLGFL+ T LQ+G+QTET FA WENHTRG+AS+MMANMGYREGMGLG +GQGML+PI VK+LPPK SLD+ALE+H+ +E ++ KKRSRGGKRKREKKFAEA RAAKEEEES DVF+LINNQL M SEA GGS KKQQ KG E KKVDR+ALVAY++EVK+LK+RV KLE+ V+ N+ EKAVYEAAMRKL +TR+ALA+AEAVH SASNAVVSKEKEK+WLKF Sbjct: 1 MGSEEERVLENQLELQLQEQRDSLSAIDQALLSDPTNLELLAVHEELVQAIKDAEEGLFHLKRARLLQEADAILHNTN---IFAEDEKVEFLDPTDVEPELLEEKCHSVGSKCRFRHINGRWYNGQVVQLDNS-VAKVSFLTPTSENMLMCKFFLQQRCRFGSSCRLSHGVDVQLSALKKFVPTIWEQSLVGSSIWAVSTANAGTWREAELESWDEKAEVGQVVFRDDGSTVKLGAEDMALSEHAEVSDSESDSSLQQSESSDCEEDEESQGLGFLDCTNLQRGVQTETAKFATWENHTRGIASRMMANMGYREGMGLGVTGQGMLDPIPVKILPPKQSLDYALESHKREEKPDKECKKKRSRGGKRKREKKFAEANRAAKEEEESASDVFALINNQLTMHSEAFGGGSMKKQQSKGPEEGKKVDRRALVAYEEEVKDLKMRVEKLEQFVNANKKEKAVYEAAMRKLNKTREALADAEAVHVSASNAVVSKEKEKRWLKF 496
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: M0SKB8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 457.988 bits (1177), Expect = 4.098e-152 Identity = 300/481 (62.37%), Postives = 368/481 (76.51%), Query Frame = -1 Query: 140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLE---------EDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSP-------KGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEA-VNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531 P N ++L+VHEEL+ IK+ EEGLLNLKR+RLLREAD + S Q A S DV+VEPL+ E + VGSKCRFRY+DGRWY+GQ+V L SA+ISFLTPTSE M +CKFFLQQRCRFG NCRLSHG+ VP+SSLK Y PT+W+ S+VGSSIWA + GIWR+AELESW+DEL G+VVF+DDGSS +L +AL++SEYA++SD EE++ S EEE +GLGFLE+T LQKG+QTETT+FAKWE+HTRG+ASKMMA+MGYREGMGLGASGQG+L+P+ VKVLPPK SLDHA+ +ENDE+ +GK+RSRGGKRKREK++A+AARA+K EEE PDVF+ INNQLA Q A V+ +KK G ++ DR++LVAYDDEVKEL+ ++ KL EMV+RNR +KA+YEAA RKL ETRKALA+ EA HA+ASNAVV+KEKEKKWLKF Sbjct: 38 PSNLELLSVHEELILAIKDAEEGLLNLKRSRLLREAD--MIFSGQEAESI-------SQDVKVEPLDLRQDKSELSESETNSVGSKCRFRYTDGRWYNGQIVELGSPTSARISFLTPTSEGMTMCKFFLQQRCRFGNNCRLSHGLIVPISSLKNYIPTVWKQSLVGSSIWAAAGNYSGIWRKAELESWDDELMVGQVVFQDDGSSVKLSSDALSISEYAEMSDGEENDDDFSSDGSESSEEEEDTDSGIGHQGLGFLEATILQKGVQTETTVFAKWEHHTRGIASKMMASMGYREGMGLGASGQGILDPVVVKVLPPKQSLDHAV-ANENDENSVGRGKRRSRGGKRKREKRYADAARASKAEEEKAPDVFNFINNQLAGQDVAYVSSNRSKKGTGNGEASARREDRRSLVAYDDEVKELRNKIEKLAEMVNRNRKDKAIYEAATRKLNETRKALADVEAAHAAASNAVVNKEKEKKWLKF 508
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A022QRR0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a005102mg PE=4 SV=1) HSP 1 Score: 457.218 bits (1175), Expect = 6.948e-152 Identity = 291/466 (62.45%), Postives = 359/466 (77.04%), Query Frame = -1 Query: 140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSE-AVN-XXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531 P N ++L+VH EL++ IK+ EEGL LK++RLLREADS L S + +VK E L+ D E EPL D Y VGSKCRFR++DGRWY+G VV L GS SAKI+FL PTSE+ML+CKFFLQQRCRFG NCRL HG+DVPLSSLK+Y PT WE S+VGSSIWA+PD + GIWREAEL SW+++LR G+VVFR DG+S +LG E++TLSEYA++++++++ SS+ + S EE+ +GLGFLEST Q+G+QTET IFA WENHTRG+ASKMMANMGYREGMGLG +GQG+LNPISVKVLPPK SLD A++ N E+ K+ G +++ K AA A EEE DVFSLIN +LAM + ++N GGS KKQQ KG+ EEKK DR AL+AY++EVK L+ + KLEEMV+RNR EKAVY+AAMRKL ETRKALA+AE HAS S AV K+KEKKWLKF Sbjct: 36 PSNAELLSVHVELIQSIKDAEEGLFQLKKSRLLREADSILEGS--LSSNDVKVELLDPRDNEAEPLV-DEEYSVGSKCRFRHTDGRWYNGLVVGLEGSESAKITFLNPTSESMLMCKFFLQQRCRFGNNCRLLHGIDVPLSSLKEYIPTTWEQSLVGSSIWALPDREAGIWREAELASWDEKLRQGEVVFRYDGTSLKLGTESITLSEYAEVNEEDDTCTSSDSNFSDSEEEDFSQGLGFLESTNSQRGVQTETAIFATWENHTRGIASKMMANMGYREGMGLGVTGQGILNPISVKVLPPKQSLDRAVKNQGNQEN-NVARVKKRTRGGKRKRDKKLAAAAKAAEEEGESKDVFSLINTRLAMHGKGSINGGGSVKKQQNKGNVEEKKEDRWALLAYEEEVKTLRFQCDKLEEMVNRNRKEKAVYDAAMRKLNETRKALADAEVAHASTSKAVARKDKEKKWLKF 497
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: V4NJM8_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10000137mg PE=4 SV=1) HSP 1 Score: 442.58 bits (1137), Expect = 4.119e-146 Identity = 291/476 (61.13%), Postives = 357/476 (75.00%), Query Frame = -1 Query: 140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXS----------PKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHEND-EDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAM-QSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531 P NP++L+VHEEL+ IK+ EEGLL+LKRARLL+EAD L+ + + ++++E E EE + GSKCRFR++DGRWY+G+++ GS SAKISFLTPTSE+M++CKFF+QQRCRFG++CR SHG+DVPLSSLK Y PT W+ SMVGS IWAV SK IWR AELESW+DEL+ G VVF+ DGSSA+LG +A+ LSEYAQ++DD+ E E + SD E P+G+GFLEST ++G+QT+T IFAKWENHTRG+ASKMMA+MGYREGMGLGASGQG+++PI VKVLPPK SLDHALE +N E EK KKRSRGGKRKREKKFAEAARAAK+EEES+ D+FSLINNQL E VN ++ K + VDRKALVAY++EVKELKL+ +KLE MV RN+N++ V +AA R+L E RKALA A ASAS V SKEKEKKWLKF Sbjct: 35 PSNPELLSVHEELLSAIKDAEEGLLHLKRARLLQEADIVLHGLTHNVGIKAENVDPLANELEPEKTEEKKDSD-GSKCRFRHTDGRWYNGRIIGFEGSDSAKISFLTPTSESMMMCKFFMQQRCRFGSSCRSSHGLDVPLSSLKNYDPTEWKQSMVGSKIWAVSGSKYDIWRVAELESWDDELKVGGVVFKGDGSSAKLGSDAIALSEYAQMTDDDGEEDEQYEEEGSDSGSEESGSSDCDEEFPEGIGFLESTNQRRGVQTDTAIFAKWENHTRGIASKMMASMGYREGMGLGASGQGIVDPILVKVLPPKRSLDHALEHIKNGVEKSEKPKKKRSRGGKRKREKKFAEAARAAKQEEESKQDLFSLINNQLCTSHHEKVN----GRESVKKRQNKGPVDRKALVAYEEEVKELKLQAMKLEAMVKRNKNDQIVSDAATRRLNEVRKALACTMAAQASASKDVESKEKEKKWLKF 505
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: C3H22_ARATH (Zinc finger CCCH domain-containing protein 22 OS=Arabidopsis thaliana GN=At2g24830 PE=2 SV=1) HSP 1 Score: 422.165 bits (1084), Expect = 2.840e-140 Identity = 287/481 (59.67%), Postives = 351/481 (72.97%), Query Frame = -1 Query: 140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXX----------SPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDE-DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQL------AMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531 P NP++L+VHEEL+ IKE EEGLL+LKRARLL EAD LN N A + + +E E EE + GSKCRFR++DGRWY+G+++ GS SAKISFLTPTSE+M+ICKFF+QQRCRFG++CR SHG+DVP+SSLK Y T W+ MVGS IWAV SK IWR+AELESW+DEL+ G VVFRDD SSA+LG ++L LSEYAQ++DD+ E E+ S + E SP+G+GFLEST L +G+QT+T +FAKWENHTRG+ASKMMA+MGYREGMGLG SGQG+LNPI VKVLP K SLD+ALE N E EK+ KKRSRGGKRKR KKFAEAA+AAK+EEES+PD+FSLIN Q+ + SE+V + VDRKALV Y DEV++LKL ++KLE+MV+RN+ + V EAA R+L E RKALA A A+ASNA+VSKE EKKWLKF Sbjct: 35 PSNPELLSVHEELLSAIKEVEEGLLHLKRARLLEEADIVLNGLNHDAGVK-------PEHLEPEKTEEKKDLD-GSKCRFRHTDGRWYNGRIIGFEGSDSAKISFLTPTSESMMICKFFMQQRCRFGSSCRSSHGLDVPISSLKNYEQTEWKQLMVGSKIWAVSGSKYDIWRKAELESWDDELQVGGVVFRDDKSSAKLGSDSLALSEYAQMTDDDGEEEEEEDEQQSASDSEDSVSSDYDEGSPQGIGFLESTNLPRGVQTDTALFAKWENHTRGIASKMMASMGYREGMGLGVSGQGILNPILVKVLPAKRSLDYALEHIRNGECKSEKQKKKRSRGGKRKRGKKFAEAAKAAKQEEESKPDLFSLINEQIFPTRHEKVHSESVK----------NRQNKGPVDRKALVEYQDEVRDLKLEMLKLEQMVNRNKKDLVVSEAATRRLKEVRKALASTLACQAAASNAIVSKENEKKWLKF 497
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: C3H18_ORYSJ (Zinc finger CCCH domain-containing protein 18 OS=Oryza sativa subsp. japonica GN=Os02g0793000 PE=2 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 1.216e-135 Identity = 265/471 (56.26%), Postives = 329/471 (69.85%), Query Frame = -1 Query: 140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXX-----XXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQ--SEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531 P N +L VHEEL+ IK+ EEGLL+LKR+RL+++ D + + E + DDVE EPLE + + VGSKCRFR+ DGRWY+G V+ L GS A+ISFLTPTSENM +CKFFLQQRCRFG+NCRLSHG+ +P+ SLK++ PT W+ S+VGSSI A G+WR AELESW+D+L+ G+VVF+DDGSSA L ++L++SEYA SD E S D +E +GLG LES L G+QTET IFAKWE+HTRGVASKMMA MGYREGMGLG SGQGML+PI VKVLPPK SLDHA+ E ++ K+ G +++ +K +A A EEEE VFS IN+QL Q +E S K + +G KK DR++L+AYDDEVKEL+ RV KLEEM+ RNR +KA YEAA +KL +TRKALA+AEA HASA+NAV KEKEKKWLKF Sbjct: 39 PSNADLLEVHEELLAAIKDAEEGLLHLKRSRLVKQIDEIF-PNQEPTSEAPEVAVDPPDDVEPEPLEP-QEFSVGSKCRFRHKDGRWYNGCVIGLEGSSDARISFLTPTSENMSMCKFFLQQRCRFGSNCRLSHGIVIPILSLKQFTPTRWQQSLVGSSILAASGHHSGLWRRAELESWDDDLKVGQVVFQDDGSSARLPSDSLSISEYADESDEDGEGSSSDEGSDFSEDGDQEDESVHQGLGLLESKNLS-GVQTETAIFAKWEHHTRGVASKMMAKMGYREGMGLGVSGQGMLDPIPVKVLPPKQSLDHAVAASEVNDSVGPGKKRSRGGKRKREKKFAEQARAAKAEEEERS--VFSFINSQLVGQDVAEGSAVKSKKDSSGEANGHAKKEDRRSLLAYDDEVKELRSRVEKLEEMMKRNRKDKAFYEAASKKLKQTRKALADAEATHASATNAVARKEKEKKWLKF 504
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_HUMAN (Zinc finger CCCH-type with G patch domain-containing protein OS=Homo sapiens GN=ZGPAT PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 7.124e-21 Identity = 70/233 (30.04%), Postives = 104/233 (44.64%), Query Frame = -1 Query: 599 NGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWN--------DELRTGKVVFRDDGSSAELGIEALTL---------SEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALET 1246 +GS ++ +L PT +++ C FFL+ +CRF NCR SHG V L L+ + GS+ A + G+W A + + D L + V DG L EA S YA++ + + + + L + S A+ G T ++ FA WE HTRG+ S+++ MGY G GLG +G + PI VLP SLD +ET Sbjct: 160 DGSAGVRVLYLYPTHKSLKPCPFFLEGKCRFKENCRFSHGQVVSLDELRPFQDPDLSSLQAGSACLA--KHQDGLWHAARITDVDNGYYTVKFDSLLLREAVVEGDGILPPLRTEATESDSDSDGTGDSSYARVVGSDAVDSAQSSALCPS--------LAVVGSDAVDSG--TCSSAFAGWEVHTRGIGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSLDQCVET 380
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_AEDAE (Zinc finger CCCH-type with G patch domain-containing protein OS=Aedes aegypti GN=AAEL004458 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.335e-20 Identity = 66/249 (26.51%), Postives = 120/249 (48.19%), Query Frame = -1 Query: 593 VGSKCR----FRYSDGRWYDGQVVTLNGSG----SAKISFLTPTSENMLICKFFLQQRCRFGAN-CRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 1312 VGSKC ++ +++ + +L+ S +AK+ F+ PT + M+ C +FL+ C+F CR SHG + ++ LK+Y +E + + ++ IW + +++ + E +T K+ + EL E + E + + S + ++ D + +E + L WE HT+G+ SK+M MGY G GLG+ G+G++ P+S +VLP SLD+ ++ E Sbjct: 114 VGSKCSAPHIHKWGSKSYHNALICSLDASDLDDVAAKVLFINPTHQEMVPCAYFLEGDCKFNDEMCRFSHGELISINELKEYREPRFE-LLRKKGCKVLAKNRNRIWSKGTIQTADFETKTCKIQMDEGRHEVELQFENVLPLEGDDVPSSDSESNSDSDEENEDDVVSLQQA-QIIERSLLNPAPDQR---LGDWEKHTKGIGSKIMLKMGYVVGAGLGSKGEGIVVPVSAQVLPQGRSLDYCMQLRE 357
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_ANOGA (Zinc finger CCCH-type with G patch domain-containing protein OS=Anopheles gambiae GN=AGAP002111 PE=3 SV=4) HSP 1 Score: 95.1301 bits (235), Expect = 2.934e-19 Identity = 76/262 (29.01%), Postives = 118/262 (45.04%), Query Frame = -1 Query: 590 VGSKCR----FRYSDGRWYDGQVVTLNGS----GSAKISFLTPTSENMLICKFFLQQRCRF-GANCRLSHGVDVPLSSLKKY-APTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGI---EALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIF--------AKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHEN 1312 VGSKC + +++ V +L+ +AK+ F PT ML C +FL+ CRF CR SHG V L L+ Y AP GS A+ +W + + + + + KV ++G +L + + L L E + +E+ + + AL+K + E ++F +WE HTRG+ SK+M MGY G GLG G+G++ P+S +VLP SLD+ +E E Sbjct: 137 VGSKCSAPHLHTWGSTAYHNAMVCSLDADDLAHATAKVLFTNPTHREMLPCAYFLEGECRFTDEKCRYSHGEVVRLDQLRDYRAPQFERLRRAGSR--ALVKQSTRLWCKGTVTEVDFDAKRCKVRL-EEGKREQLEVPFEDLLPLDE----------DEDGQEAAEDSESDTDGADEEEADDEALRKALLVEKSLFHPAPDRRLGEWEEHTRGIGSKIMQKMGYIVGTGLGREGEGIVVPVSAQVLPQGRSLDYCMELREQ 385
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROAN (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila ananassae GN=GF15731 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.126e-18 Identity = 73/235 (31.06%), Postives = 113/235 (48.09%), Query Frame = -1 Query: 593 VTLNGSGSA----KISFLTPTSENMLICKFFLQQRCRFG-ANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWA-VPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIF--------AKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 1255 V +NG G+ ++ F PT ML C ++L+ CRF A CR SHG V SS++KY P + + A +PD +W + N + +V R DG + E ++ D+E EL+SE+S S + + + A ++ E ++F WE +TRG+ SK+M MGY G GLG+ G+G++ P+S ++LP SLD +E E Sbjct: 131 VIINGDGALDARLRVLFTNPTHREMLPCSYYLEGECRFDEARCRYSHGALVTGSSIRKYNPPDFHKLSRSCPVLAQLPDR---LWHRGRVLCVNFVEQVCRV--RLDGQDHKERERDFKFEELFPLTTDQEDELTSEDSSSVNDGSSDEEESDMDDLEAARRARMVELSLFTFKPTEKLGAWEEYTRGIGSKLMEKMGYIHGTGLGSDGRGIVTPVSAQILPKGRSLDACMELRE 360
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_RAT (Zinc finger CCCH-type with G patch domain-containing protein OS=Rattus norvegicus GN=Zgpat PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.159e-18 Identity = 66/233 (28.33%), Postives = 97/233 (41.63%), Query Frame = -1 Query: 602 NGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWN--------DELRTGKVVFRDDGSSAELGIEALTLSE----------YAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALE 1246 +GS ++ +L PT +++ C FFL+ +CRF NCR SHG V + L+ + GS+ A + G+W A + + D L + V D L EA S+ YA++ +E+ + G T ++ FA WE HTRG+ SK++ MGY G GLG +G + PI VLP SLD E Sbjct: 155 DGSACVRVLYLYPTHKSLKPCPFFLEGKCRFKENCRFSHGQLVSVDELRPFQDPDLSLLQTGSACLA--KHQDGLWHPARITDVDNGYYTVKFDSLLLKEAVVEGDSILPPLRTEATDSSDSDTGDASDSSYARV----------------------------VEANTVDTG--TCSSAFAGWEVHTRGIGSKLLVKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSLDQCAE 355
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_MOUSE (Zinc finger CCCH-type with G patch domain-containing protein OS=Mus musculus GN=Zgpat PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.732e-18 Identity = 66/233 (28.33%), Postives = 97/233 (41.63%), Query Frame = -1 Query: 602 NGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWN--------DELRTGKVVFRDDGSSAELGIEALTLSE----------YAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALE 1246 +GS ++ +L PT +++ C FFL+ +CRF NCR SHG V + L+ + GS+ A + G+W A + + D L + V D L EA S+ YA++ +E + + G T ++ FA WE HTRG+ SK++ MGY G GLG +G + PI VLP SLD E Sbjct: 159 DGSACVRVLYLYPTHKSLKPCPFFLEGKCRFKENCRFSHGQVVSVDELRPFQDPDLSLLQTGSACLA--KHQDGLWHPARITDVDNGYYTVKFDSLLLKEAVVEGDSILPPLRTEATESSDSDTGDASDSSYARV----------------------------VEPSTVDTG--TCSSAFAGWEVHTRGIGSKLLVKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSLDQCAE 359
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_SALSA (Zinc finger CCCH-type with G patch domain-containing protein OS=Salmo salar GN=zgpat PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.250e-18 Identity = 66/217 (30.41%), Postives = 101/217 (46.54%), Query Frame = -1 Query: 602 KISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGK--------VVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALE 1228 ++ ++ PT ++M C FFL+ +CRF NCR SHG V +S L+++ + GSS A D GIW ++ +++ T K V+ DG L + L ++ + D+ + E P+ L E A + ++ F WE HTRG+ SK+M MGY G GLG + +G + P+ VLP SLD E Sbjct: 165 RVLYVHPTQKSMKPCPFFLEDKCRFADNCRFSHGEVVYVSELREFLESDLTNLQEGSSCLARQDD--GIWYSGKITDIDNDFYTVKFDSALLKNVMVEADGVIPPLREDDLPSCSDSE------------DDDNGEGEAAFPRVLTQEEDWAPSR----SSSAFGGWEAHTRGIGSKLMLKMGYEYGKGLGKTSEGRVEPVLAVVLPKGKSLDQCAE 363
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_XENTR (Zinc finger CCCH-type with G patch domain-containing protein OS=Xenopus tropicalis GN=zgpat PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.034e-17 Identity = 64/218 (29.36%), Postives = 104/218 (47.71%), Query Frame = -1 Query: 593 NGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 1246 +G ++ +L PT + M C FFL +CRF +CR SHG V L+ L+ +A VGS A GIW A + ++++G + D + L E++ ++ SS++ D + E+++ + G+ ++ F WE HTRG+ SK++A MGY G GLG + +G + PI +LP SLD +E + Sbjct: 156 DGEAGVRVLYLYPTHKAMKPCPFFLDGKCRFDDSCRFSHGQVVALAELQPFAEADVASLAVGSPCLA--QHSDGIWYPARI----TDIKSGFYTVKFD---SLLLKESVLEADSIIPPLRGSDSSSSDDDDDDEEEDDAAEDSGYARVLGAGSAGSAHSSQFGGWEAHTRGIGSKLLARMGYEIGKGLGRNAEGRVEPIQAVLLPKGKSLDQCIEMQQ 364 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0008189 ID=g.arboreum_cottongen_reftransV1_0008189; Name=g.arboreum_cottongen_reftransV1_0008189; organism=Gossypium arboreum; type=contig; length=1642bpback to top |