g.arboreum_cottongen_reftransV1_0008189, g.arboreum_cottongen_reftransV1_0008189 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: B9RNS4_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0920370 PE=4 SV=1) HSP 1 Score: 503.442 bits (1295), Expect = 4.380e-170 Identity = 334/464 (71.98%), Postives = 389/464 (83.84%), Query Frame = -1 Query: 140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531 P N ++L+V EELV+ IK+ E+GLL+LKRARLLRE DSAL+ S + +VK E L+SD+V EPLEE S+ VGSKCRFR++DGRWY+G+++ L GS +AKI+FLTPTSENML CKFFLQQRCRFG NCRLSHGVDVPLSSL+ Y PTMW+ SMVGSSIWAV DS GIWREAELESW+D+LR GKVVFRDDGSSAEL +++ LSE+A SD+EES SSE+SDSSDYEEES +GLGFLES+ LQ+GIQTET IFA+WENHTRG+ASKMMANMGYR+GMGLGASGQGM++PISVKVLPPK SLDHAL++ + +E +E GKKRSRGGKRKREKK A A+ AKEEEE PDVFSLIN QLA +EA+N K ++ + KKVDR+ L+AYDDE+KEL+LR KLEEM SRN+ EK VYEAAMRKL ETRKALAEAEA HASASNAVVSKEKEKKWLKF Sbjct: 36 PSNHELLSVQEELVQAIKDAEDGLLHLKRARLLREVDSALHDS-KDTGNDVKIEPLDSDEVGAEPLEE-HSHSVGSKCRFRHNDGRWYNGKIIELEGSTNAKIAFLTPTSENMLTCKFFLQQRCRFGTNCRLSHGVDVPLSSLRTYIPTMWDQSMVGSSIWAVSDSNAGIWREAELESWDDKLRVGKVVFRDDGSSAELESDSMNLSEHALKSDEEESHSSSEQSDSSDYEEESAQGLGFLESSTLQRGIQTETAIFARWENHTRGIASKMMANMGYRDGMGLGASGQGMVDPISVKVLPPKQSLDHALQSQKEEEIRENHGKKRSRGGKRKREKKLAALAKEAKEEEEMNPDVFSLINIQLAKHNEALN--GGSKTKQHHNKVSKKVDRRVLIAYDDEMKELRLRAEKLEEMASRNKKEKVVYEAAMRKLNETRKALAEAEAAHASASNAVVSKEKEKKWLKF 495
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A068VCQ1_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_257 OS=Coffea canephora GN=GSCOC_T00000326001 PE=4 SV=1) HSP 1 Score: 495.352 bits (1274), Expect = 7.093e-167 Identity = 330/462 (71.43%), Postives = 393/462 (85.06%), Query Frame = -1 Query: 140 NPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1525 N ++LAV ELV+ I + EEGLL+LKRARLLREAD L + VEEVK E+L+ +DVEVEP+ D+SY VGSKCRFR++DGRWY+G ++ L GS SAKISFLTPTSE+ML+CKFFLQQRCRFG++CRLSHGVDVP+SSLK+Y PT+WE S+ GSSIWA+ D+K GIWREAELESW++ L G VVFRDDGSSA+LG+ AL+LSE+A++SD+E+S+L SEE+DSSD E++ +GLGFLE+T QKGIQTET IFAKWENHTRG+ASKMMA+MGYR+GMGLGASGQG+++PI VKVLPPK SLDHA+E EN++DKE +GKKRSRGGKRKREKKFA A RAAKE+EES PDVFSLIN QLA E +NGGSTKKQQ + +K DR LVAY+DEVKEL++RV KLEEMV RN+ EK VYEAAMRKL ETRK LAEAEA HASAS+AV+SKEKEK+WLKF Sbjct: 38 NAELLAVQAELVQAISDVEEGLLHLKRARLLREADFVLQ-GPKGHVEEVKVESLDPNDVEVEPVV-DQSYSVGSKCRFRHTDGRWYNGLILGLEGSNSAKISFLTPTSESMLMCKFFLQQRCRFGSSCRLSHGVDVPISSLKQYIPTVWEQSLAGSSIWALQDAKFGIWREAELESWDEMLNLGHVVFRDDGSSAKLGVGALSLSEFAEVSDEEDSDLGSEETDSSDSGEDNSRGLGFLETTTSQKGIQTETAIFAKWENHTRGIASKMMASMGYRDGMGLGASGQGIVDPIPVKVLPPKQSLDHAVENQENEKDKENQGKKRSRGGKRKREKKFAAACRAAKEQEESEPDVFSLINTQLAKHGETLNGGSTKKQQNMANDAGRKDDRSRLVAYEDEVKELRMRVEKLEEMVIRNKKEKVVYEAAMRKLTETRKLLAEAEAAHASASSAVISKEKEKRWLKF 497
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A0B2NVJ9_GLYSO (Zinc finger CCCH domain-containing protein 18 OS=Glycine soja GN=glysoja_006369 PE=4 SV=1) HSP 1 Score: 483.797 bits (1244), Expect = 1.995e-162 Identity = 340/499 (68.14%), Postives = 407/499 (81.56%), Query Frame = -1 Query: 140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633 M EEERVLENQLELQL+EQR+SLSA+D AL SDP +P++LAVHEELV+ IK+ EEGLL+LKRARLL+EADS L+ +N E K + L+ VE EPLE D+ Y VGSKCRFR+ DGRWY+GQVV L+ S AK+SFLTPTSENML+CKFFLQQRCRFG+NCRLSHG+DV LS+LKKY PT+W+ S+VGSSIWAV + G WREAEL+SW+++ G+VVFRDDGSS +LG E + LSE+A++SD E + S EEE +G+GFLEST LQ+GIQTET FA WENHTRG+ASKMMANMGYREGMGLG +GQGML+PI+VKVLPPK SLDHALE+H+ +E+KEK+GKK+ G +++ +K AEA RAAKEEEES DVF+LINN LAM +EA GG KKQQ KGS E KKVDR+ALVAY++EVK+LK+RV KLE +V+ NR EKAVYE AMRKL ETRKALA+AEAVHASASN+V SKEKEK+WLKF Sbjct: 1 MGSEEERVLENQLELQLQEQRDSLSAIDQALLSDPTDPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTN--IFTEEKVDPLDPTYVEPEPLE-DKCYSVGSKCRFRHKDGRWYNGQVVQLDNS-VAKVSFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREAELKSWDEKAGVGQVVFRDDGSSVKLGAEEMALSEHAEMSDIESDSSLDQSDSSDYEEEEESQGIGFLESTNLQRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPIAVKVLPPKQSLDHALESHKREENKEKQGKKKQSRGGKRKREKKFAEANRAAKEEEESASDVFALINNHLAMHNEAFGGGLMKKQQSKGSEEGKKVDRRALVAYEEEVKDLKIRVEKLEHIVNANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 495
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: M5XSY5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004892mg PE=4 SV=1) HSP 1 Score: 483.411 bits (1243), Expect = 2.515e-162 Identity = 364/501 (72.65%), Postives = 414/501 (82.63%), Query Frame = -1 Query: 140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWN-DELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHEN--DEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633 MA+EEERVLEN LELQL+EQR SL+ ++DALAS+P N +ILA+HEE+V+ IK+ EEGLL+LKRARLLREAD L+ S A + +D VE EPLEE SY VGSKCRF ++DGRWY+GQV+ L+GS SAKISFLTPTSENMLICKFFLQQRCRFG NCRLSHGVDVPLSSLKKY PT+WE S VGS+IWAV D K G+WREA+LESW+ L GKVVFRDDGSSA LG EA+TLSEYAQ+S +EES+ SSE+SD SD E+E P+GLGFLEST LQ+GIQT+T IFAKWENHTRG+ASKMMANMGY EG GLGASGQG+++PISVKVLP K SLD A+ + E +E KE +GKKRSRGGKRKREKKFA ARAAKEEEES PDVF+L NGGS KKQQ KGSGE K+VDR+ALVAYDDEVK+LK+RVVKLEEM SRN+ EK VYEAAMRKL ETRKALAEAEA ASASNAVVS+EKEK+WLKF Sbjct: 1 MANEEERVLENLLELQLQEQRVSLATINDALASEPNNTEILALHEEIVQAIKDAEEGLLHLKRARLLREADLVLDGSAHADEDVKMETLDPTD-VEPEPLEEP-SYTVGSKCRFCHTDGRWYNGQVIGLDGSNSAKISFLTPTSENMLICKFFLQQRCRFGTNCRLSHGVDVPLSSLKKYTPTIWEQSHVGSNIWAVTDGKTGVWREAKLESWDGGALGVGKVVFRDDGSSANLGEEAITLSEYAQMSAEEESDSSSEQSDFSDDEDEGPQGLGFLESTILQRGIQTDTAIFAKWENHTRGIASKMMANMGYLEGTGLGASGQGIVDPISVKVLPAKQSLDLAVGSCEGKVEEGKENQGKKRSRGGKRKREKKFAALARAAKEEEESTPDVFTL------------NGGSGKKQQNKGSGEGKRVDRRALVAYDDEVKDLKVRVVKLEEMASRNKKEKVVYEAAMRKLTETRKALAEAEAAQASASNAVVSREKEKRWLKF 487
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: I1KYC3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 483.411 bits (1243), Expect = 3.764e-162 Identity = 340/501 (67.86%), Postives = 407/501 (81.24%), Query Frame = -1 Query: 140 TTMADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1639 M EEERVLENQLELQL+EQR+SLSA+D AL SDP +P++LAVHEELV+ IK+ EEGLL+LKRARLL+EADS L+ +N E K + L+ VE EPLE D+ Y VGSKCRFR+ DGRWY+GQVV L+ S AK+SFLTPTSENML+CKFFLQQRCRFG+NCRLSHG+DV LS+LKKY PT+W+ S+VGSSIWAV + G WREAEL+SW+++ G+VVFRDDGSS +LG E + LSE+A++SD E + S EEE +G+GFLEST LQ+GIQTET FA WENHTRG+ASKMMANMGYREGMGLG +GQGML+PI+VKVLPPK SLDHALE+H+ +E+KEK+GKK+ G +++ +K AEA RAAKEEEES DVF+LINN LAM +EA GG KKQQ KGS E KKVDR+ALVAY++EVK+LK+RV KLE +V+ NR EKAVYE AMRKL ETRKALA+AEAVHASASN+V SKEKEK+WLKF Sbjct: 7 VAMGSEEERVLENQLELQLQEQRDSLSAIDQALLSDPTDPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTN--IFTEEKVDPLDPTYVEPEPLE-DKCYSVGSKCRFRHKDGRWYNGQVVQLDNS-VAKVSFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREAELKSWDEKAGVGQVVFRDDGSSVKLGAEEMALSEHAEMSDIESDSSLDQSDSSDYEEEEESQGIGFLESTNLQRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPIAVKVLPPKQSLDHALESHKREENKEKQGKKKQSRGGKRKREKKFAEANRAAKEEEESASDVFALINNHLAMHNEAFGGGLMKKQQSKGSEEGKKVDRRALVAYEEEVKDLKIRVEKLEHIVNANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 503
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A0A0LSP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382790 PE=4 SV=1) HSP 1 Score: 483.026 bits (1242), Expect = 5.596e-162 Identity = 354/499 (70.94%), Postives = 421/499 (84.37%), Query Frame = -1 Query: 140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETH-ENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633 MA +EER LE+QLE+QL EQ+ESL+AL DALASDP N ++L VHEELV+ IK+ EEGLL+LKR+RLLREAD+ L + A E+VK E L++ D++ EPLE D S+ VGSKCRFRY+DGRWYDG++V L+GS SAKISFLTPT+ENML+CKFFLQQRCRFG NCRLSHGVD+PL+SL+ Y PT+W SM GSSI A+ S+ IWR AELESW+D L+ +VVF+ DG S +LG E + LSEYA I+D+EES+ S E+SDSSDYEE+ +GLGFLES+ QKGIQTETTIFAKWENHTRG+ASKMMANMGYREGMGLGASGQGMLNPI VKVLP K SLDHALE+ EN+ + E GKKRSRGGKRKREKKFA A+RAAKEEEESRPDVF+LIN+ LAM + A+N GS KKQ+ KGS + KKVDR+ ++AYDDEVK+L++R+ KLEEMV+RN+ EK VYEAA+RKL ETRKALAEAEA HASASNAV S+EKEK+WLKF Sbjct: 1 MASDEERALEHQLEVQLYEQKESLAALQDALASDPSNSELLEVHEELVQAIKDAEEGLLHLKRSRLLREADTVLRGHDSNAAEDVKVEPLDATDIKPEPLE-DHSFFVGSKCRFRYTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLMCKFFLQQRCRFGTNCRLSHGVDIPLTSLRSYVPTIWNQSMAGSSILALS-SRNDIWRHAELESWDDALQVAQVVFKGDGYSQKLGPEDIALSEYALINDEEESDSSLEQSDSSDYEEDDLQGLGFLESSTQQKGIQTETTIFAKWENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTNDENNGKKRSRGGKRKREKKFAAASRAAKEEEESRPDVFNLINHHLAMHNRALNDGSVKKQKDKGSADWKKVDRRTIIAYDDEVKDLRIRIEKLEEMVNRNKKEKVVYEAALRKLNETRKALAEAEAAHASASNAVNSREKEKRWLKF 497
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: I1N0J9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 480.33 bits (1235), Expect = 5.370e-161 Identity = 354/498 (71.08%), Postives = 415/498 (83.33%), Query Frame = -1 Query: 140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633 M EEERVLENQLELQL+EQR+SLSA+ AL SDP NP++LAVHEELV+ IK+ EEGLL+LKRARLL+EADS L+ +N EE K E L+S DVE EPLE D+ Y VGSKCRFR+ DGRWY+GQVV L+ + AK+SFLTPTSENML+CKFFLQQRCRFG+NCRLSHG+DV LS+LKKY PT+W+ S+VGSSIWAV + G WREAELES +++ G+VVFRD+GSS ++G E + LSE+A++ D ES+ S +SDSSDYEEE P+GLGFLEST L++GIQTET FA WENHTRG+ASKMMANMGYREGMGLG +GQGML+PI VKVLPPK SLDHALE+H+ + ++ KKRSRGGKRKREKKFAE RAAKEEEES DVF+LINN LAM SEA GS KKQQ KGS E KKVDR+ALVAY++EVK+LK+RV KLE +V+ NR EKAVYE AMRKL ETRKALA+AEAVHASASN+V SKEKEK+WLKF Sbjct: 1 MGSEEERVLENQLELQLQEQRDSLSAIGQALLSDPTNPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTN-IFTEEEKVEPLDSTDVEPEPLE-DKCYSVGSKCRFRHKDGRWYNGQVVQLD-NAVAKVSFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREAELESLDEKAGVGQVVFRDNGSSVKVGAEEMALSEHAEM-SDLESDSSLVQSDSSDYEEEEPQGLGFLESTNLRRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPIPVKVLPPKQSLDHALESHKR--EGKEGKKKRSRGGKRKREKKFAEVNRAAKEEEESASDVFALINNHLAMHSEAFGSGSMKKQQSKGSEEGKKVDRRALVAYEEEVKDLKMRVEKLEHIVNANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 492
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A0B2PY90_GLYSO (Zinc finger CCCH domain-containing protein 18 OS=Glycine soja GN=glysoja_035344 PE=4 SV=1) HSP 1 Score: 480.33 bits (1235), Expect = 5.370e-161 Identity = 354/498 (71.08%), Postives = 415/498 (83.33%), Query Frame = -1 Query: 140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633 M EEERVLENQLELQL+EQR+SLSA+ AL SDP NP++LAVHEELV+ IK+ EEGLL+LKRARLL+EADS L+ +N EE K E L+S DVE EPLE D+ Y VGSKCRFR+ DGRWY+GQVV L+ + AK+SFLTPTSENML+CKFFLQQRCRFG+NCRLSHG+DV LS+LKKY PT+W+ S+VGSSIWAV + G WREAELES +++ G+VVFRD+GSS ++G E + LSE+A++ D ES+ S +SDSSDYEEE P+GLGFLEST L++GIQTET FA WENHTRG+ASKMMANMGYREGMGLG +GQGML+PI VKVLPPK SLDHALE+H+ + ++ KKRSRGGKRKREKKFAE RAAKEEEES DVF+LINN LAM SEA GS KKQQ KGS E KKVDR+ALVAY++EVK+LK+RV KLE +V+ NR EKAVYE AMRKL ETRKALA+AEAVHASASN+V SKEKEK+WLKF Sbjct: 1 MGSEEERVLENQLELQLQEQRDSLSAIGQALLSDPTNPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTN-IFTEEEKVEPLDSTDVEPEPLE-DKCYSVGSKCRFRHKDGRWYNGQVVQLD-NAVAKVSFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREAELESLDEKAGVGQVVFRDNGSSVKVGAEEMALSEHAEM-SDLESDSSLVQSDSSDYEEEEPQGLGFLESTNLRRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPIPVKVLPPKQSLDHALESHKR--EGKEGKKKRSRGGKRKREKKFAEVNRAAKEEEESASDVFALINNHLAMHSEAFGSGSMKKQQSKGSEEGKKVDRRALVAYEEEVKDLKMRVEKLEHIVNANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 492
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: B9IL87_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0018s02840g PE=4 SV=1) HSP 1 Score: 476.863 bits (1226), Expect = 1.247e-159 Identity = 322/473 (68.08%), Postives = 384/473 (81.18%), Query Frame = -1 Query: 140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLE---------EDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531 P NP++L+V EEL++VIK+ EEGLL+LKRARLLREADS L+ S +DV+ EPL+ ED+ Y VGSKCRFR+ DGRWY+GQ++ L S +AKI+FLTP SENMLICKFFLQ+RCRFG +CRLSHGVDV LSSLK Y PTMW+ S+VGSSIWA+ DS VGIWR+AELESW++E R G+VVF D GSSA+LG EA+T+SEYA +SD+EE++ SSE SDSSDY+EES +GLGFLEST LQ+GIQT T IFA WENHTRG+ASKMMANMGYREGMGLGASGQGML+PI VKVLPPK SLDHALE+ + + K+ GKKRSRGGKRKREKKFA AARAAK EEE+RPDVF+LINNQLA +EA+N + K+QK EEKKV+R+ L+AYDDE+KEL++RV KLE+M +RN+ EK VYE+AMRKL ETR ALA+AEA ASASNA+ +EKEKKWLKF Sbjct: 36 PSNPELLSVQEELLQVIKDVEEGLLHLKRARLLREADSVLHASYHTV-----------EDVKAEPLDPVHVEPEPLEDQCYSVGSKCRFRHVDGRWYNGQIIELVCSDTAKIAFLTPISENMLICKFFLQERCRFGTSCRLSHGVDVSLSSLKNYVPTMWDQSLVGSSIWALSDSNVGIWRKAELESWDNEHRVGQVVFHDGGSSAKLGSEAMTISEYALMSDEEETDSSSEGSDSSDYDEESAEGLGFLESTNLQRGIQTGTAIFATWENHTRGIASKMMANMGYREGMGLGASGQGMLDPIPVKVLPPKQSLDHALES-QKEGIKDNHGKKRSRGGKRKREKKFAAAARAAKAEEETRPDVFTLINNQLAGHNEALN-SESAKKQKSKGSEEKKVNRQDLLAYDDEIKELRIRVEKLEDMANRNKKEKVVYESAMRKLNETRIALAKAEASKASASNAITGREKEKKWLKF 495
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A072UVS7_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g053700 PE=4 SV=1) HSP 1 Score: 472.626 bits (1215), Expect = 5.521e-158 Identity = 347/498 (69.68%), Postives = 414/498 (83.13%), Query Frame = -1 Query: 140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633 M EEERVLENQLELQL EQR+SL+A+D AL DP N ++L VHEELV+ IK+ EEGLL+LKRARLL EAD+ L S EE K E L+ DVE EPLEE +S+ VGSKCRFRY DGRWY+GQV+ L+ S AKISFLTPTSENML+CKFFLQQRCRFG+NCRLSHGVDV L+SLK+YAPT+W+PS+ GSSIWAV ++ GIWR AELESW+++ G+VVFRDDGSS +LG + + LSEYA D +S+ S E+SD S EEE P+GLGF++ST LQKG+QTET IFAKWENHTRG+ASKMMANMGY+EGMGLG +GQGM++PI VKVLPPK SLDHAL++H+ + + EK+ KKR+RGGKRKREK+FAEA RAAKEEEES PDVFSLIN QLAM EA N GS KKQQ KGSGE KKVDRK LVAY+++VK+LK++V+K E+M N+ EK VY+AAM+KL++TRKALAEAEAVHASAS+ VVSKEK+K+WLKF Sbjct: 1 MGSEEERVLENQLELQLHEQRDSLTAIDHALLLDPTNSELLEVHEELVQAIKDAEEGLLHLKRARLLSEADTVL-CSTDIFAEEEKVEPLDPADVEPEPLEE-KSFSVGSKCRFRYKDGRWYNGQVMQLDNS-VAKISFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGVDVQLTSLKEYAPTIWKPSLAGSSIWAVSNANAGIWRAAELESWDEKAGVGQVVFRDDGSSVKLGAQDMVLSEYAD-MSDIDSDSSLEQSDYSGSEEEEPQGLGFMDSTNLQKGVQTETAIFAKWENHTRGMASKMMANMGYQEGMGLGLTGQGMVDPIPVKVLPPKQSLDHALKSHKVEGNTEKQRKKRTRGGKRKREKRFAEAIRAAKEEEESAPDVFSLINTQLAMHGEASN-GSMKKQQSKGSGEGKKVDRKMLVAYENDVKDLKVQVLKFEQMAEANKREKPVYDAAMKKLVQTRKALAEAEAVHASASDDVVSKEKDKRWLKF 493
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROVI (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila virilis GN=GJ17921 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.075e-10 Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = -1 Query: 593 WENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 754 WE +TRG+ SK+MA+MGY G GLG+ G+G++ P+S ++LP SLD +E E Sbjct: 305 WEQYTRGIGSKLMASMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELRE 358
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROSI (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila simulans GN=GD23643 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.498e-9 Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 593 TTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 772 T WE TRG+ SK+M MGY G GLG+ G+G++ P+S ++LP SLD +E E Sbjct: 302 TDRLGAWEEFTRGIGSKLMEKMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELRE 361
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROSE (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila sechellia GN=GM17832 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.538e-9 Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 593 TTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 772 T WE TRG+ SK+M MGY G GLG+ G+G++ P+S ++LP SLD +E E Sbjct: 302 TDRLGAWEEFTRGIGSKLMEKMGYIHGTGLGSEGRGIVTPVSAQILPQGRSLDACMELRE 361
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROYA (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila yakuba GN=GE18884 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.552e-9 Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 593 TTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 772 T WE TRG+ SK+M MGY G GLG+ G+G++ P+S ++LP SLD +E E Sbjct: 302 TERLGAWEEFTRGIGSKLMEKMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELRE 361
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROME (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila melanogaster GN=CG4709 PE=2 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.552e-9 Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 593 TTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 772 T WE TRG+ SK+M MGY G GLG+ G+G++ P+S ++LP SLD +E E Sbjct: 302 TERLGAWEEFTRGIGSKLMEKMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELRE 361 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0008189 ID=g.arboreum_cottongen_reftransV1_0008189; Name=g.arboreum_cottongen_reftransV1_0008189; organism=Gossypium arboreum; type=contig; length=1642bpback to top |