g.arboreum_cottongen_reftransV1_0008189, g.arboreum_cottongen_reftransV1_0008189 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0008189
Unique Nameg.arboreum_cottongen_reftransV1_0008189
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1642
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr4chromosomeg.arboreum_cottongen_reftransV1_0008189:1..1642 .
Chr4:33536213..33539100 +		n/a
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: B9RNS4_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0920370 PE=4 SV=1)

HSP 1 Score: 503.442 bits (1295), Expect = 4.380e-170
Identity = 334/464 (71.98%), Postives = 389/464 (83.84%), Query Frame = -1 
Query:  140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531
            P N ++L+V EELV+ IK+ E+GLL+LKRARLLRE DSAL+ S +    +VK E L+SD+V  EPLEE  S+ VGSKCRFR++DGRWY+G+++ L GS +AKI+FLTPTSENML CKFFLQQRCRFG NCRLSHGVDVPLSSL+ Y PTMW+ SMVGSSIWAV DS  GIWREAELESW+D+LR GKVVFRDDGSSAEL  +++ LSE+A  SD+EES  SSE+SDSSDYEEES +GLGFLES+ LQ+GIQTET IFA+WENHTRG+ASKMMANMGYR+GMGLGASGQGM++PISVKVLPPK SLDHAL++ + +E +E  GKKRSRGGKRKREKK A  A+ AKEEEE  PDVFSLIN QLA  +EA+N     K ++  +   KKVDR+ L+AYDDE+KEL+LR  KLEEM SRN+ EK VYEAAMRKL ETRKALAEAEA HASASNAVVSKEKEKKWLKF
Sbjct:   36 PSNHELLSVQEELVQAIKDAEDGLLHLKRARLLREVDSALHDS-KDTGNDVKIEPLDSDEVGAEPLEE-HSHSVGSKCRFRHNDGRWYNGKIIELEGSTNAKIAFLTPTSENMLTCKFFLQQRCRFGTNCRLSHGVDVPLSSLRTYIPTMWDQSMVGSSIWAVSDSNAGIWREAELESWDDKLRVGKVVFRDDGSSAELESDSMNLSEHALKSDEEESHSSSEQSDSSDYEEESAQGLGFLESSTLQRGIQTETAIFARWENHTRGIASKMMANMGYRDGMGLGASGQGMVDPISVKVLPPKQSLDHALQSQKEEEIRENHGKKRSRGGKRKREKKLAALAKEAKEEEEMNPDVFSLINIQLAKHNEALN--GGSKTKQHHNKVSKKVDRRVLIAYDDEMKELRLRAEKLEEMASRNKKEKVVYEAAMRKLNETRKALAEAEAAHASASNAVVSKEKEKKWLKF 495
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A068VCQ1_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_257 OS=Coffea canephora GN=GSCOC_T00000326001 PE=4 SV=1)

HSP 1 Score: 495.352 bits (1274), Expect = 7.093e-167
Identity = 330/462 (71.43%), Postives = 393/462 (85.06%), Query Frame = -1 
Query:  140 NPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1525
            N ++LAV  ELV+ I + EEGLL+LKRARLLREAD  L    +  VEEVK E+L+ +DVEVEP+  D+SY VGSKCRFR++DGRWY+G ++ L GS SAKISFLTPTSE+ML+CKFFLQQRCRFG++CRLSHGVDVP+SSLK+Y PT+WE S+ GSSIWA+ D+K GIWREAELESW++ L  G VVFRDDGSSA+LG+ AL+LSE+A++SD+E+S+L SEE+DSSD  E++ +GLGFLE+T  QKGIQTET IFAKWENHTRG+ASKMMA+MGYR+GMGLGASGQG+++PI VKVLPPK SLDHA+E  EN++DKE +GKKRSRGGKRKREKKFA A RAAKE+EES PDVFSLIN QLA   E +NGGSTKKQQ   +   +K DR  LVAY+DEVKEL++RV KLEEMV RN+ EK VYEAAMRKL ETRK LAEAEA HASAS+AV+SKEKEK+WLKF
Sbjct:   38 NAELLAVQAELVQAISDVEEGLLHLKRARLLREADFVLQ-GPKGHVEEVKVESLDPNDVEVEPVV-DQSYSVGSKCRFRHTDGRWYNGLILGLEGSNSAKISFLTPTSESMLMCKFFLQQRCRFGSSCRLSHGVDVPISSLKQYIPTVWEQSLAGSSIWALQDAKFGIWREAELESWDEMLNLGHVVFRDDGSSAKLGVGALSLSEFAEVSDEEDSDLGSEETDSSDSGEDNSRGLGFLETTTSQKGIQTETAIFAKWENHTRGIASKMMASMGYRDGMGLGASGQGIVDPIPVKVLPPKQSLDHAVENQENEKDKENQGKKRSRGGKRKREKKFAAACRAAKEQEESEPDVFSLINTQLAKHGETLNGGSTKKQQNMANDAGRKDDRSRLVAYEDEVKELRMRVEKLEEMVIRNKKEKVVYEAAMRKLTETRKLLAEAEAAHASASSAVISKEKEKRWLKF 497
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A0B2NVJ9_GLYSO (Zinc finger CCCH domain-containing protein 18 OS=Glycine soja GN=glysoja_006369 PE=4 SV=1)

HSP 1 Score: 483.797 bits (1244), Expect = 1.995e-162
Identity = 340/499 (68.14%), Postives = 407/499 (81.56%), Query Frame = -1 
Query:  140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633
            M  EEERVLENQLELQL+EQR+SLSA+D AL SDP +P++LAVHEELV+ IK+ EEGLL+LKRARLL+EADS L+ +N     E K + L+   VE EPLE D+ Y VGSKCRFR+ DGRWY+GQVV L+ S  AK+SFLTPTSENML+CKFFLQQRCRFG+NCRLSHG+DV LS+LKKY PT+W+ S+VGSSIWAV  +  G WREAEL+SW+++   G+VVFRDDGSS +LG E + LSE+A++SD E      +   S   EEE  +G+GFLEST LQ+GIQTET  FA WENHTRG+ASKMMANMGYREGMGLG +GQGML+PI+VKVLPPK SLDHALE+H+ +E+KEK+GKK+   G +++ +K  AEA RAAKEEEES  DVF+LINN LAM +EA  GG  KKQQ KGS E KKVDR+ALVAY++EVK+LK+RV KLE +V+ NR EKAVYE AMRKL ETRKALA+AEAVHASASN+V SKEKEK+WLKF
Sbjct:    1 MGSEEERVLENQLELQLQEQRDSLSAIDQALLSDPTDPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTN--IFTEEKVDPLDPTYVEPEPLE-DKCYSVGSKCRFRHKDGRWYNGQVVQLDNS-VAKVSFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREAELKSWDEKAGVGQVVFRDDGSSVKLGAEEMALSEHAEMSDIESDSSLDQSDSSDYEEEEESQGIGFLESTNLQRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPIAVKVLPPKQSLDHALESHKREENKEKQGKKKQSRGGKRKREKKFAEANRAAKEEEESASDVFALINNHLAMHNEAFGGGLMKKQQSKGSEEGKKVDRRALVAYEEEVKDLKIRVEKLEHIVNANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 495
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: M5XSY5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004892mg PE=4 SV=1)

HSP 1 Score: 483.411 bits (1243), Expect = 2.515e-162
Identity = 364/501 (72.65%), Postives = 414/501 (82.63%), Query Frame = -1 
Query:  140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWN-DELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHEN--DEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633
            MA+EEERVLEN LELQL+EQR SL+ ++DALAS+P N +ILA+HEE+V+ IK+ EEGLL+LKRARLLREAD  L+ S  A  +        +D VE EPLEE  SY VGSKCRF ++DGRWY+GQV+ L+GS SAKISFLTPTSENMLICKFFLQQRCRFG NCRLSHGVDVPLSSLKKY PT+WE S VGS+IWAV D K G+WREA+LESW+   L  GKVVFRDDGSSA LG EA+TLSEYAQ+S +EES+ SSE+SD SD E+E P+GLGFLEST LQ+GIQT+T IFAKWENHTRG+ASKMMANMGY EG GLGASGQG+++PISVKVLP K SLD A+ + E   +E KE +GKKRSRGGKRKREKKFA  ARAAKEEEES PDVF+L            NGGS KKQQ KGSGE K+VDR+ALVAYDDEVK+LK+RVVKLEEM SRN+ EK VYEAAMRKL ETRKALAEAEA  ASASNAVVS+EKEK+WLKF
Sbjct:    1 MANEEERVLENLLELQLQEQRVSLATINDALASEPNNTEILALHEEIVQAIKDAEEGLLHLKRARLLREADLVLDGSAHADEDVKMETLDPTD-VEPEPLEEP-SYTVGSKCRFCHTDGRWYNGQVIGLDGSNSAKISFLTPTSENMLICKFFLQQRCRFGTNCRLSHGVDVPLSSLKKYTPTIWEQSHVGSNIWAVTDGKTGVWREAKLESWDGGALGVGKVVFRDDGSSANLGEEAITLSEYAQMSAEEESDSSSEQSDFSDDEDEGPQGLGFLESTILQRGIQTDTAIFAKWENHTRGIASKMMANMGYLEGTGLGASGQGIVDPISVKVLPAKQSLDLAVGSCEGKVEEGKENQGKKRSRGGKRKREKKFAALARAAKEEEESTPDVFTL------------NGGSGKKQQNKGSGEGKRVDRRALVAYDDEVKDLKVRVVKLEEMASRNKKEKVVYEAAMRKLTETRKALAEAEAAQASASNAVVSREKEKRWLKF 487
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: I1KYC3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 483.411 bits (1243), Expect = 3.764e-162
Identity = 340/501 (67.86%), Postives = 407/501 (81.24%), Query Frame = -1 
Query:  140 TTMADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1639
              M  EEERVLENQLELQL+EQR+SLSA+D AL SDP +P++LAVHEELV+ IK+ EEGLL+LKRARLL+EADS L+ +N     E K + L+   VE EPLE D+ Y VGSKCRFR+ DGRWY+GQVV L+ S  AK+SFLTPTSENML+CKFFLQQRCRFG+NCRLSHG+DV LS+LKKY PT+W+ S+VGSSIWAV  +  G WREAEL+SW+++   G+VVFRDDGSS +LG E + LSE+A++SD E      +   S   EEE  +G+GFLEST LQ+GIQTET  FA WENHTRG+ASKMMANMGYREGMGLG +GQGML+PI+VKVLPPK SLDHALE+H+ +E+KEK+GKK+   G +++ +K  AEA RAAKEEEES  DVF+LINN LAM +EA  GG  KKQQ KGS E KKVDR+ALVAY++EVK+LK+RV KLE +V+ NR EKAVYE AMRKL ETRKALA+AEAVHASASN+V SKEKEK+WLKF
Sbjct:    7 VAMGSEEERVLENQLELQLQEQRDSLSAIDQALLSDPTDPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTN--IFTEEKVDPLDPTYVEPEPLE-DKCYSVGSKCRFRHKDGRWYNGQVVQLDNS-VAKVSFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREAELKSWDEKAGVGQVVFRDDGSSVKLGAEEMALSEHAEMSDIESDSSLDQSDSSDYEEEEESQGIGFLESTNLQRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPIAVKVLPPKQSLDHALESHKREENKEKQGKKKQSRGGKRKREKKFAEANRAAKEEEESASDVFALINNHLAMHNEAFGGGLMKKQQSKGSEEGKKVDRRALVAYEEEVKDLKIRVEKLEHIVNANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 503
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A0A0LSP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382790 PE=4 SV=1)

HSP 1 Score: 483.026 bits (1242), Expect = 5.596e-162
Identity = 354/499 (70.94%), Postives = 421/499 (84.37%), Query Frame = -1 
Query:  140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETH-ENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633
            MA +EER LE+QLE+QL EQ+ESL+AL DALASDP N ++L VHEELV+ IK+ EEGLL+LKR+RLLREAD+ L   +  A E+VK E L++ D++ EPLE D S+ VGSKCRFRY+DGRWYDG++V L+GS SAKISFLTPT+ENML+CKFFLQQRCRFG NCRLSHGVD+PL+SL+ Y PT+W  SM GSSI A+  S+  IWR AELESW+D L+  +VVF+ DG S +LG E + LSEYA I+D+EES+ S E+SDSSDYEE+  +GLGFLES+  QKGIQTETTIFAKWENHTRG+ASKMMANMGYREGMGLGASGQGMLNPI VKVLP K SLDHALE+  EN+ + E  GKKRSRGGKRKREKKFA A+RAAKEEEESRPDVF+LIN+ LAM + A+N GS KKQ+ KGS + KKVDR+ ++AYDDEVK+L++R+ KLEEMV+RN+ EK VYEAA+RKL ETRKALAEAEA HASASNAV S+EKEK+WLKF
Sbjct:    1 MASDEERALEHQLEVQLYEQKESLAALQDALASDPSNSELLEVHEELVQAIKDAEEGLLHLKRSRLLREADTVLRGHDSNAAEDVKVEPLDATDIKPEPLE-DHSFFVGSKCRFRYTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLMCKFFLQQRCRFGTNCRLSHGVDIPLTSLRSYVPTIWNQSMAGSSILALS-SRNDIWRHAELESWDDALQVAQVVFKGDGYSQKLGPEDIALSEYALINDEEESDSSLEQSDSSDYEEDDLQGLGFLESSTQQKGIQTETTIFAKWENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTNDENNGKKRSRGGKRKREKKFAAASRAAKEEEESRPDVFNLINHHLAMHNRALNDGSVKKQKDKGSADWKKVDRRTIIAYDDEVKDLRIRIEKLEEMVNRNKKEKVVYEAALRKLNETRKALAEAEAAHASASNAVNSREKEKRWLKF 497
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: I1N0J9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 480.33 bits (1235), Expect = 5.370e-161
Identity = 354/498 (71.08%), Postives = 415/498 (83.33%), Query Frame = -1 
Query:  140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633
            M  EEERVLENQLELQL+EQR+SLSA+  AL SDP NP++LAVHEELV+ IK+ EEGLL+LKRARLL+EADS L+ +N    EE K E L+S DVE EPLE D+ Y VGSKCRFR+ DGRWY+GQVV L+ +  AK+SFLTPTSENML+CKFFLQQRCRFG+NCRLSHG+DV LS+LKKY PT+W+ S+VGSSIWAV  +  G WREAELES +++   G+VVFRD+GSS ++G E + LSE+A++  D ES+ S  +SDSSDYEEE P+GLGFLEST L++GIQTET  FA WENHTRG+ASKMMANMGYREGMGLG +GQGML+PI VKVLPPK SLDHALE+H+   + ++  KKRSRGGKRKREKKFAE  RAAKEEEES  DVF+LINN LAM SEA   GS KKQQ KGS E KKVDR+ALVAY++EVK+LK+RV KLE +V+ NR EKAVYE AMRKL ETRKALA+AEAVHASASN+V SKEKEK+WLKF
Sbjct:    1 MGSEEERVLENQLELQLQEQRDSLSAIGQALLSDPTNPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTN-IFTEEEKVEPLDSTDVEPEPLE-DKCYSVGSKCRFRHKDGRWYNGQVVQLD-NAVAKVSFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREAELESLDEKAGVGQVVFRDNGSSVKVGAEEMALSEHAEM-SDLESDSSLVQSDSSDYEEEEPQGLGFLESTNLRRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPIPVKVLPPKQSLDHALESHKR--EGKEGKKKRSRGGKRKREKKFAEVNRAAKEEEESASDVFALINNHLAMHSEAFGSGSMKKQQSKGSEEGKKVDRRALVAYEEEVKDLKMRVEKLEHIVNANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 492
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A0B2PY90_GLYSO (Zinc finger CCCH domain-containing protein 18 OS=Glycine soja GN=glysoja_035344 PE=4 SV=1)

HSP 1 Score: 480.33 bits (1235), Expect = 5.370e-161
Identity = 354/498 (71.08%), Postives = 415/498 (83.33%), Query Frame = -1 
Query:  140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633
            M  EEERVLENQLELQL+EQR+SLSA+  AL SDP NP++LAVHEELV+ IK+ EEGLL+LKRARLL+EADS L+ +N    EE K E L+S DVE EPLE D+ Y VGSKCRFR+ DGRWY+GQVV L+ +  AK+SFLTPTSENML+CKFFLQQRCRFG+NCRLSHG+DV LS+LKKY PT+W+ S+VGSSIWAV  +  G WREAELES +++   G+VVFRD+GSS ++G E + LSE+A++  D ES+ S  +SDSSDYEEE P+GLGFLEST L++GIQTET  FA WENHTRG+ASKMMANMGYREGMGLG +GQGML+PI VKVLPPK SLDHALE+H+   + ++  KKRSRGGKRKREKKFAE  RAAKEEEES  DVF+LINN LAM SEA   GS KKQQ KGS E KKVDR+ALVAY++EVK+LK+RV KLE +V+ NR EKAVYE AMRKL ETRKALA+AEAVHASASN+V SKEKEK+WLKF
Sbjct:    1 MGSEEERVLENQLELQLQEQRDSLSAIGQALLSDPTNPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTN-IFTEEEKVEPLDSTDVEPEPLE-DKCYSVGSKCRFRHKDGRWYNGQVVQLD-NAVAKVSFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREAELESLDEKAGVGQVVFRDNGSSVKVGAEEMALSEHAEM-SDLESDSSLVQSDSSDYEEEEPQGLGFLESTNLRRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPIPVKVLPPKQSLDHALESHKR--EGKEGKKKRSRGGKRKREKKFAEVNRAAKEEEESASDVFALINNHLAMHSEAFGSGSMKKQQSKGSEEGKKVDRRALVAYEEEVKDLKMRVEKLEHIVNANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 492
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: B9IL87_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0018s02840g PE=4 SV=1)

HSP 1 Score: 476.863 bits (1226), Expect = 1.247e-159
Identity = 322/473 (68.08%), Postives = 384/473 (81.18%), Query Frame = -1 
Query:  140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLE---------EDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531
            P NP++L+V EEL++VIK+ EEGLL+LKRARLLREADS L+ S               +DV+ EPL+         ED+ Y VGSKCRFR+ DGRWY+GQ++ L  S +AKI+FLTP SENMLICKFFLQ+RCRFG +CRLSHGVDV LSSLK Y PTMW+ S+VGSSIWA+ DS VGIWR+AELESW++E R G+VVF D GSSA+LG EA+T+SEYA +SD+EE++ SSE SDSSDY+EES +GLGFLEST LQ+GIQT T IFA WENHTRG+ASKMMANMGYREGMGLGASGQGML+PI VKVLPPK SLDHALE+ + +  K+  GKKRSRGGKRKREKKFA AARAAK EEE+RPDVF+LINNQLA  +EA+N   + K+QK    EEKKV+R+ L+AYDDE+KEL++RV KLE+M +RN+ EK VYE+AMRKL ETR ALA+AEA  ASASNA+  +EKEKKWLKF
Sbjct:   36 PSNPELLSVQEELLQVIKDVEEGLLHLKRARLLREADSVLHASYHTV-----------EDVKAEPLDPVHVEPEPLEDQCYSVGSKCRFRHVDGRWYNGQIIELVCSDTAKIAFLTPISENMLICKFFLQERCRFGTSCRLSHGVDVSLSSLKNYVPTMWDQSLVGSSIWALSDSNVGIWRKAELESWDNEHRVGQVVFHDGGSSAKLGSEAMTISEYALMSDEEETDSSSEGSDSSDYDEESAEGLGFLESTNLQRGIQTGTAIFATWENHTRGIASKMMANMGYREGMGLGASGQGMLDPIPVKVLPPKQSLDHALES-QKEGIKDNHGKKRSRGGKRKREKKFAAAARAAKAEEETRPDVFTLINNQLAGHNEALN-SESAKKQKSKGSEEKKVNRQDLLAYDDEIKELRIRVEKLEDMANRNKKEKVVYESAMRKLNETRIALAKAEASKASASNAITGREKEKKWLKF 495
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A072UVS7_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g053700 PE=4 SV=1)

HSP 1 Score: 472.626 bits (1215), Expect = 5.521e-158
Identity = 347/498 (69.68%), Postives = 414/498 (83.13%), Query Frame = -1 
Query:  140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633
            M  EEERVLENQLELQL EQR+SL+A+D AL  DP N ++L VHEELV+ IK+ EEGLL+LKRARLL EAD+ L  S     EE K E L+  DVE EPLEE +S+ VGSKCRFRY DGRWY+GQV+ L+ S  AKISFLTPTSENML+CKFFLQQRCRFG+NCRLSHGVDV L+SLK+YAPT+W+PS+ GSSIWAV ++  GIWR AELESW+++   G+VVFRDDGSS +LG + + LSEYA    D +S+ S E+SD S  EEE P+GLGF++ST LQKG+QTET IFAKWENHTRG+ASKMMANMGY+EGMGLG +GQGM++PI VKVLPPK SLDHAL++H+ + + EK+ KKR+RGGKRKREK+FAEA RAAKEEEES PDVFSLIN QLAM  EA N GS KKQQ KGSGE KKVDRK LVAY+++VK+LK++V+K E+M   N+ EK VY+AAM+KL++TRKALAEAEAVHASAS+ VVSKEK+K+WLKF
Sbjct:    1 MGSEEERVLENQLELQLHEQRDSLTAIDHALLLDPTNSELLEVHEELVQAIKDAEEGLLHLKRARLLSEADTVL-CSTDIFAEEEKVEPLDPADVEPEPLEE-KSFSVGSKCRFRYKDGRWYNGQVMQLDNS-VAKISFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGVDVQLTSLKEYAPTIWKPSLAGSSIWAVSNANAGIWRAAELESWDEKAGVGQVVFRDDGSSVKLGAQDMVLSEYAD-MSDIDSDSSLEQSDYSGSEEEEPQGLGFMDSTNLQKGVQTETAIFAKWENHTRGMASKMMANMGYQEGMGLGLTGQGMVDPIPVKVLPPKQSLDHALKSHKVEGNTEKQRKKRTRGGKRKREKRFAEAIRAAKEEEESAPDVFSLINTQLAMHGEASN-GSMKKQQSKGSGEGKKVDRKMLVAYENDVKDLKVQVLKFEQMAEANKREKPVYDAAMKKLVQTRKALAEAEAVHASASDDVVSKEKDKRWLKF 493
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_NEMVE (Zinc finger CCCH-type with G patch domain-containing protein OS=Nematostella vectensis GN=v1g244155 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.555e-17
Identity = 72/257 (28.02%), Postives = 113/257 (43.97%), Query Frame = -1 
Query:  584 GSKCRFRYSDGRW-----YDGQVVTLNG---------SGSAKISFLTPTSENMLICKFFLQQRCRF-GANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDE 1309
            G+KCR  ++   W     ++  V  L               ++ FL PT  +M+ C +FL+ +C+F GA CR SHG  V +  LK +    +     G    A      G+W  + ++S   E     + +    + A L ++ +      ++  D ES+  S+  DSS  +    +    +       G  +       WE HT+G+ SK+MA MGY  G GLG  G+G + PI V VLP   SLD   E  E ++
Sbjct:  112 GTKCRVAFTQ-EWGVKEHHNAMVFKLESIPLDEETVDQAKVRVLFLNPTHRSMVPCPYFLEGKCKFAGAECRFSHGYLVDVEHLKPFKEPDFSSVKAGQRCLARYSD--GVWYNSTIKSIKHESHEFLIHYETYNTDATLPLDDIYPLGPEEVESDSESDSQSDTGDSSSSKAAIEQDDDVIRYAWKPTGALSS---LGDWEQHTKGIGSKLMAKMGYIFGKGLGKDGEGRVEPIEVVVLPQGKSLDKCAELREKNK 362
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_BOVIN (Zinc finger CCCH-type with G patch domain-containing protein OS=Bos taurus GN=ZGPAT PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.525e-16
Identity = 65/223 (29.15%), Postives = 95/223 (42.60%), Query Frame = -1 
Query:  602 NGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWN--------DELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALE 1246
            +GS   ++ +L PT +++  C FFL+ +CRF  NCR SHG  V +  L+ +          GS+  A    + G+W  A +   +        D L   + V   D     L  E    S+      D+ S                      +E  A   G  T ++ FA WE HTRG+ S+++A MGY  G GLG   +G + P+   VLP   SLD   E
Sbjct:  161 DGSPGVRVLYLYPTHKSLKPCSFFLEGKCRFQENCRFSHGQVVSVDELRPFQDPDLSSLQAGSACLA--KRQDGLWYPARITDVDSGYYTVKFDSLLLKETVVEGDSILPPLRTEPAGSSDSDGSDADDPSYAR------------------VVEPGAANPG--TCSSAFAGWEVHTRGIGSRLLAKMGYEFGKGLGRHAEGRVEPVHAVVLPRGKSLDQCAE 361
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROER (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila erecta GN=GG10072 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.566e-16
Identity = 69/225 (30.67%), Postives = 104/225 (46.22%), Query Frame = -1 
Query:  593 KISFLTPTSENMLICKFFLQQRCRFG-ANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAV-PDSKVGIWREAELESWNDELRTGKVVFRDDGSSA-----ELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIF------AKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 1228
            ++ F  PT   ML C ++L+  CRF    CR SHG  V  SS++KY P  +        ++A+ PD    +W    +   N   +  +V  R DG        +   E L      Q  DDE S   S  S +++  +E+   +  LE     + ++     F        WE  TRG+ SK+M  MGY  G GLG+ G+G++ P+S ++LP   SLD  +E  E
Sbjct:  142 RVLFTNPTHREMLPCSYYLEGECRFDETKCRFSHGALVTGSSIRKYNPPDFHKLCRSRPVFALLPDR---LWHRGRVLCVNFVEQVCRV--RLDGQDHKERERDFKFEELYPLTTDQEEDDELSSEESNSSMNNESSDEAESDMDDLEEARRARMVELSLFTFKPTERLGAWEEFTRGIGSKLMEKMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELRE 361
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROPS (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila pseudoobscura pseudoobscura GN=GA18374 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.696e-16
Identity = 66/223 (29.60%), Postives = 103/223 (46.19%), Query Frame = -1 
Query:  593 KISFLTPTSENMLICKFFLQQRCRFGA-NCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWA-VPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSE-YAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFA--------KWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 1228
            ++ ++ PT   ML C ++L+  CRF    CR SHG  VP +S+K Y P  +        + A +PD    +W    +   N   +T +V  R DG   +         E +  I++ E+   S + S S   E          +  A  +    E ++F          WE +TRG+ SK+M  MGY  G GLG+ G+G++ P+S ++LP   SLD  +E  E
Sbjct:  142 RVLYINPTHCEMLPCNYYLEGECRFDEIRCRYSHGALVPGASIKSYIPPDFPRLARNCPVLAKMPDR---LWHRGRVLCANFVEQTCRV--RLDGQDHKERERDFQFEELFPLITEKEDELTSEDSSSSPHDESSDEIDSDMDDLEAAHRSRMVELSLFTFKPTEKLGAWEQYTRGIGSKLMEKMGYIHGTGLGSEGRGIVTPVSAQILPQGRSLDACMELRE 359
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROPE (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila persimilis GN=GL18949 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.480e-16
Identity = 66/223 (29.60%), Postives = 104/223 (46.64%), Query Frame = -1 
Query:  593 KISFLTPTSENMLICKFFLQQRCRFGA-NCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWA-VPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSE-YAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFA--------KWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 1228
            ++ ++ PT   ML C ++L+  CRF    CR SHG  VP +S+K Y P  +        + A +PD    +W    +   N   +T +V  R DG   +         E +  I+++E+   S + S S   E          +  A  +    E ++F          WE +TRG+ SK+M  MGY  G GLG+ G+G++ P+S ++LP   SLD  +E  E
Sbjct:  142 RVLYINPTHCEMLPCNYYLEGECRFDEIRCRYSHGALVPGASIKSYIPPDFPRLARNCPVLAKMPDR---LWHRGRVLCANFVEQTCRV--RLDGQDHKERERDFQFEELFPLITEEEDGLTSEDSSSSPHDESSDEIDSDMDDLEAAHRSRMVELSLFTFKPTEKLGAWEQYTRGIGSKLMEKMGYIHGTGLGSEGRGIVTPVSAQILPQGRSLDACMELRE 359
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_SHEEP (Zinc finger CCCH-type with G patch domain-containing protein OS=Ovis aries GN=ZGPAT PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.341e-16
Identity = 64/223 (28.70%), Postives = 94/223 (42.15%), Query Frame = -1 
Query:  602 NGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWN--------DELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALE 1246
            +GS   ++ +L PT +++  C FFL+ +CRF  NCR SHG  V +  L+ +          GS+  A    + G+W  A +   +        D L   + V   D     L  +    S+      D+ S                      +E  A   G  T ++ FA WE HTRG+ S+++A MGY  G GLG    G + P+   VLP   SLD   E
Sbjct:  161 DGSPGVRVLYLYPTHKSLKPCPFFLEGKCRFQENCRFSHGQVVSVDELRPFQDPDLSSLQAGSACLA--KRQDGLWYPARITDVDSGYYTVKFDSLLLKEAVVEGDSILPPLRTDPAGSSDSDGSDADDPSYAR------------------VVEPGAANPG--TCSSAFAGWEVHTRGIGSRLLAKMGYEFGKGLGRRADGRVEPVHAVVLPRGKSLDQCAE 361
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DANRE (Zinc finger CCCH-type with G patch domain-containing protein OS=Danio rerio GN=zgpat PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.420e-15
Identity = 63/205 (30.73%), Postives = 97/205 (47.32%), Query Frame = -1 
Query:  614 KISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLD 1228
            ++ ++ PT ++M  C F+L+ +CRF  NCR SHG  V +S L+ +          GS+  A  +   GIW  A +     E+  G    + D     L ++   L     I    + ++SS  S  S+ + E   G   + ++  +   Q  T  F  WE HTRG+ SK++  MGY  G GLG +  G + P+   VLP   SLD
Sbjct:  156 RVFYIHPTHKSMKPCGFYLEGKCRFMDNCRYSHGEVVCVSELRDFLEADISNMESGSACLAKHED--GIWYPARI----SEIEGGFYTVKFDS----LLLKEAVLEADGIIPPLRQDDVSSSSSSDSEDDAECDGGYAKVFTSREEDLAQVNTAEFCGWEAHTRGIGSKLLMKMGYELGKGLGKTLSGRVEPVQAVVLPKGHSLD 350
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_XENLA (Zinc finger CCCH-type with G patch domain-containing protein OS=Xenopus laevis GN=zgpat PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.953e-15
Identity = 65/224 (29.02%), Postives = 95/224 (42.41%), Query Frame = -1 
Query:  593 NGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTE------TTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 1246
            +G    ++ +L PT + M  C FFL  +C F  NCR SHG  V ++ L+ +         V S   A  +   GIW  A +        T K              ++L L E   + + +        SDSS       +  G  E +   K +  E      ++ F  WE HTRG+ SK++  MGY  G GLG + +G + PI   VLP   SLD  +E  +
Sbjct:  169 DGEAGVRVLYLYPTHKAMKPCPFFLDGKCLFNDNCRFSHGQVVSVTELQPFKEADLGSLAVDSPCLAQHND--GIWYPARITDIESGFYTVK-------------FDSLLLKE--SVLEADSIIPPLRGSDSSSSSSSDEEEDGAAEDSVYAKVLGQEIAGTTCSSEFGGWEAHTRGIGSKLLVRMGYEFGKGLGRNAEGRVEPIQAVVLPKGKSLDQCMEIQQ 375
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROGR (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila grimshawi GN=GH11061 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.913e-11
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = -1 
Query:  593 TTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 772
            T     WE +TRG+ SK+MANMGY  G GLG+ G+G++ P+S ++LP   SLD  +E  E
Sbjct:  303 TEKLGAWEQYTRGIGSKLMANMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELRE 362
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROMO (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila mojavensis GN=GI17578 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.020e-11
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = -1 
Query:  593 TTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 772
            T     WE +TRG+ SK+MANMGY  G GLG+ G+G++ P+S ++LP   SLD  +E  E
Sbjct:  300 TERLGAWEQYTRGIGSKLMANMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELRE 359
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9RNS4_RICCO4.380e-17071.98Zinc finger protein, putative OS=Ricinus communis ... [more]
A0A068VCQ1_COFCA7.093e-16771.43Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
A0A0B2NVJ9_GLYSO1.995e-16268.14Zinc finger CCCH domain-containing protein 18 OS=G... [more]
M5XSY5_PRUPE2.515e-16272.65Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
I1KYC3_SOYBN3.764e-16267.86Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
A0A0A0LSP5_CUCSA5.596e-16270.94Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
I1N0J9_SOYBN5.370e-16171.08Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2PY90_GLYSO5.370e-16171.08Zinc finger CCCH domain-containing protein 18 OS=G... [more]
B9IL87_POPTR1.247e-15968.08Zinc finger family protein OS=Populus trichocarpa ... [more]
A0A072UVS7_MEDTR5.521e-15869.68Uncharacterized protein OS=Medicago truncatula GN=... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ZGPAT_NEMVE5.555e-1728.02Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_BOVIN1.525e-1629.15Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_DROER1.566e-1630.67Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_DROPS2.696e-1629.60Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_DROPE3.480e-1629.60Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_SHEEP6.341e-1628.70Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_DANRE2.420e-1530.73Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_XENLA2.953e-1529.02Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_DROGR1.913e-1148.33Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_DROMO2.020e-1148.33Zinc finger CCCH-type with G patch domain-containi... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 247..267
NoneNo IPR availableCOILSCoilCoilcoord: 427..454
NoneNo IPR availableCOILSCoilCoilcoord: 1..30
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availableCOILSCoilCoilcoord: 458..478
NoneNo IPR availableGENE3D2.30.30.140coord: 106..139
e-value: 8.6E-5
score: 21.7
NoneNo IPR availablePANTHERPTHR23329TUFTELIN-INTERACTING PROTEIN 11-RELATEDcoord: 59..492
NoneNo IPR availablePANTHERPTHR23329:SF2ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEINcoord: 59..492
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 296..342
e-value: 2.3E-14
score: 63.7
IPR000467G-patch domainPFAMPF01585G-patchcoord: 298..339
e-value: 8.4E-13
score: 47.9
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 298..344
score: 13.143
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 144..170
e-value: 1.0E-4
score: 31.7
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 144..171
score: 14.164
IPR000571Zinc finger, CCCH-typeSUPERFAMILY90229CCCH zinc fingercoord: 145..169

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0008189 ID=g.arboreum_cottongen_reftransV1_0008189; Name=g.arboreum_cottongen_reftransV1_0008189; organism=Gossypium arboreum; type=contig; length=1642bp
AAAAAAAGTCCCAACAGAAAAGGAGAGAAGAAGCCAAATCTAATTTTAGT
TCATTTCTTTCCCTTTTTTATGGGGTAAAATCTATTACCAAACAATGCAT
AATTTGTAACTAGTCCAACATAAATATTACATAATATCAAAACTTTAGCC
ACTTTTTCTCTTTTTCTTTGCTAACGACTGCATTTGATGCTGAGGCATGA
ACTGCTTCAGCCTCCGCCAAAGCCTTACGAGTCTCGATTAATTTCCTCAT
GGCAGCCTCGTAAACAGCTTTCTCATTTCTGTTTCTGCTTACCATTTCCT
CGAGCTTTACAACTCGTAACTTTAGTTCCTTCACTTCATCATCATAAGCA
ACCAATGCCTTTCTATCAACTTTCTTCTCCTCTCCTGAACCTTTCTTTTG
TTGTTTCTTTGTTGATCCACCATTTACAGCCTCACTTTGCATTGCAAGTT
GGTTGTTGATGAGGCTAAAAACATCTGGTCTTGATTCCTCTTCTTCTTTA
GCAGCCCGAGCGGCTTCAGCGAATTTCTTCTCACGCTTTCTCTTGCCACC
TCTGCTTCGTTTCTTCCCTTTTTTCTCTTTATCCTCATCGTTCTCATGAG
TCTCCAGAGCATGATCAAGTGATAGCTTAGGAGGAAGGACTTTAACTGAG
ATCGGATTTAACATCCCCTGGCCAGATGCACCTAAACCCATCCCTTCACG
GTAACCCATATTGGCCATCATCTTAGAAGCTACACCCCTGGTATGATTTT
CCCACTTAGCAAAGATGGTAGTTTCTGTCTGGATACCTTTCTGTAGAGCA
GTGCTTTCAAGAAAACCTAAACCCTTTGGGCTCTCCTCTTCGTAGTCACT
AGAATCAGATTCTTCAGAGCTTAGTTCACTTTCTTCATCATCACTTATTT
GTGCATATTCAGATAATGTCAAAGCTTCTATCCCAAGCTCTGCAGAGCTT
CCATCATCCCGGAAAACAACCTTCCCCGTTCTGAGTTCATCATTCCATGA
TTCAAGTTCAGCTTCCCTCCAGATGCCAACTTTACTATCAGGGACTGCCC
AAATACTGGACCCAACCATCGATGGCTCCCACATGGTTGGAGCATACTTC
TTCAGCGAAGATAATGGGACATCCACTCCATGCGATAAGCGGCAATTAGC
ACCAAATCGACATCTTTGTTGCAGAAAGAACTTGCATATCAACATATTTT
CTGAAGTAGGTGTGAGGAAAGATATTTTCGCCGAACCAGAACCGTTCAAT
GTGACAACCTGACCATCATACCACCGGCCGTCACTGTAACGGAATCGACA
TTTCGACCCGACCTGATAACTCCGATCTTCCTCCAATGGTTCAACTTCCA
CATCATCTGATTCAAGAGCCTCCGCTTTAACCTCCTCAACCGCTGCTTGA
TTCGAAACATTTAACGCTGAATCAGCTTCTCGAAGTAAACGCGCGCGCTT
AAGATTAAGAAGCCCCTCCTCTGTCTCTTTGATTACCTCAACAAGCTCCT
CGTGAACCGCGAGGATCTGGGGATTGAAAGGATCAGAAGCGAGAGCATCG
TCTAAGGCAGAGAGGGATTCTCTTTGCTCTTTCAATTGAAGCTCCAACTG
GTTCTCTAGAACTCTCTCTTCTTCGTCTGCCATTGTTGTTTT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding