g.arboreum_cottongen_reftransV1_0008189, g.arboreum_cottongen_reftransV1_0008189 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0008189
Unique Nameg.arboreum_cottongen_reftransV1_0008189
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1642
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr4chromosomeg.arboreum_cottongen_reftransV1_0008189:1..1642 .
Chr4:33536213..33539100 +
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A0B0PID8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_03921 PE=4 SV=1)

HSP 1 Score: 688.337 bits (1775), Expect = 0.000e+0
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = -1 
Query:  140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633
            MADEEERVLENQLELQLKEQRESLSALDDALASDPFNPQILAVHEELVEVIKETEEGLLNLKRARLLREADSALNVSNQAAVEEVKAEALESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQISDDEESELSSEESDSSDYEEESPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDKEKKGKKRSRGGKRKREKKFAEAARAAKEEEESRPDVFSLINNQLAMQSEAVNGGSTKKQQKKGSGEEKKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKALAEAEAVHASASNAVVSKEKEKKWLKF
Sbjct:    1 MADEEERVLENQLELQLKEQRESLSALDDALASDPFNPQILAVHEELVEVIKETEEGLLNLKRARLLREADSALNVSNQAAVEEVKAEALESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQISDDEESELSSEESDSSDYEEESPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDKEKKGKKRSRGGKRKREKKFAEAARAAKEEEESRPDVFSLINNQLAMQSEAVNGGSTKKQQKKGSGEEKKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKALAEAEAVHASASNAVVSKEKEKKWLKF 498
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A0D2TKM9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G064200 PE=4 SV=1)

HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0
Identity = 489/498 (98.19%), Postives = 494/498 (99.20%), Query Frame = -1 
Query:  140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633
            MADEEERVLENQLELQLKEQRESLSAL DALASDPFNPQILAVHEELVEVIKETEEGLLNLKRARLLREADSALNVSNQAAVEEVKAEAL+ DDVEVEPL+EDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPD KVGIWREAELESWNDELRTGKVVFRDDGSSAELG+EALTLSEYAQISDDEESELSSEESDSSDYEEESPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALE+HENDEDKEKKGKKRSRGGKRKREKKFAEA+RAAKEEEESRPDVFSLINNQLAM SEAVNGGSTKKQQKKGSGEEKKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKALAEAEAVHASASNAVVSKEKEKKWLKF
Sbjct:    1 MADEEERVLENQLELQLKEQRESLSALGDALASDPFNPQILAVHEELVEVIKETEEGLLNLKRARLLREADSALNVSNQAAVEEVKAEALDPDDVEVEPLKEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDGKVGIWREAELESWNDELRTGKVVFRDDGSSAELGVEALTLSEYAQISDDEESELSSEESDSSDYEEESPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALESHENDEDKEKKGKKRSRGGKRKREKKFAEASRAAKEEEESRPDVFSLINNQLAMHSEAVNGGSTKKQQKKGSGEEKKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKALAEAEAVHASASNAVVSKEKEKKWLKF 498
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A061GHH1_THECC (Zinc finger family protein / D111/G-patch domain-containing protein OS=Theobroma cacao GN=TCM_036882 PE=4 SV=1)

HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0
Identity = 431/499 (86.37%), Postives = 460/499 (92.18%), Query Frame = -1 
Query:  140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESD-DVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633
            MADEEERVLENQLELQLKEQR+SLSAL+DALASDP +P++LAVHEELV  IKE EEGLLNLKRARLLREADSA NVS QA  E        SD +VE    E++R+Y+VGSKCRFRY+DGRWYDGQVV LNGS SAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLS LKKYAPTMWEPSMVGSSIWA+ DSKVGIWREAELESWND+LR GKVVFRD+GSSAELG+EAL LSE+AQ++D+EESELSSEESDSSDYEEESP GLGFLESTALQ+GIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGML+PISVKVLP KL LDHALE+HE+DE KEK+GKKRSRGGKRKREKKFAEAARAAK+EEESRPDVFSLINNQLAM ++AVN  STKKQQ KGSGEEKKVDRKALVAYDDEVKEL+LRV KLEEMVSRNR EKAVYEAA RKL ETRKALA+AEAVHASASNAVVSKEKEKKWLKF
Sbjct:    1 MADEEERVLENQLELQLKEQRDSLSALNDALASDPSDPELLAVHEELVVAIKEAEEGLLNLKRARLLREADSAFNVSKQADEEVKAEALEPSDVEVEPLEEEKERNYRVGSKCRFRYNDGRWYDGQVVALNGSDSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSLLKKYAPTMWEPSMVGSSIWALSDSKVGIWREAELESWNDQLRMGKVVFRDNGSSAELGVEALMLSEFAQMTDEEESELSSEESDSSDYEEESPGGLGFLESTALQRGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLDPISVKVLPAKLCLDHALESHESDESKEKRGKKRSRGGKRKREKKFAEAARAAKDEEESRPDVFSLINNQLAMHNDAVNAASTKKQQNKGSGEEKKVDRKALVAYDDEVKELRLRVAKLEEMVSRNRKEKAVYEAATRKLNETRKALADAEAVHASASNAVVSKEKEKKWLKF 499
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: F6H3K0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g07000 PE=4 SV=1)

HSP 1 Score: 527.709 bits (1358), Expect = 1.355e-179
Identity = 342/464 (73.71%), Postives = 396/464 (85.34%), Query Frame = -1 
Query:  140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531
            P N ++L+VHEEL+  IK+ EEGL +LKRARLLREADSAL+  ++   E+VK E L+  D E EPLEE +SY VGSKCRFRY+DGRWY+G ++ L G  SAKISFL+PTSENMLICKFFLQQRCRFG NCRLSHGVDV LSSLK+Y PT+WE S+VGSSIWAV D+K GIW+EAELESW++ELR GKVVFRDDGSS +LG E+++LSEYA++SD E    S +     D EEE  +GLGFLESTALQ+GIQTET IFAKWENHTRG+ASKMMANMGYREGMGLGASGQG+++P+SVKVLPPK SLDHALE+HEN+E+KE +GKKRSRGGKRKR+KKFA AARA K++EESRPDVFSLIN QLAM  EA+NGGS KKQQ K  GE KK DR+ALVAYDDEV+EL++RV KLEEMV+RN+ EK VYEAAMRKL ETRKALAEAEA HASAS AVV +EKEK+WLKF
Sbjct:   35 PTNSELLSVHEELIWAIKDAEEGLFHLKRARLLREADSALH-DHKYTAEDVKVEPLDPSDAEAEPLEE-QSYHVGSKCRFRYTDGRWYNGVILGLEGLDSAKISFLSPTSENMLICKFFLQQRCRFGTNCRLSHGVDVHLSSLKQYNPTIWEQSLVGSSIWAVSDAKYGIWKEAELESWDNELRVGKVVFRDDGSSEKLGTESISLSEYAEMSDGETDSSSEQSDSCDDEEEEGSQGLGFLESTALQRGIQTETAIFAKWENHTRGIASKMMANMGYREGMGLGASGQGIVDPLSVKVLPPKQSLDHALESHENEENKESRGKKRSRGGKRKRDKKFAAAARAKKDKEESRPDVFSLINTQLAMHGEALNGGSAKKQQNKSLGEGKKEDRRALVAYDDEVRELRIRVEKLEEMVNRNKKEKVVYEAAMRKLNETRKALAEAEAAHASASKAVVGREKEKRWLKF 496
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A059CWQ2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C04032 PE=4 SV=1)

HSP 1 Score: 512.301 bits (1318), Expect = 1.736e-173
Identity = 338/464 (72.84%), Postives = 393/464 (84.70%), Query Frame = -1 
Query:  140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531
            P NP+ILAVHEELV  I++ +EGL +LKRARLLRE DS +  S+ +AVE+VK E+L+ +DVE EPLEE R Y +GSKCRFR+SDG WY+GQ+V L GS  AKISFLTP +ENMLICKFFLQQRCRFG +CRLSHGVDVPLSSLKK+ PT WE S+VGSSIWA  DSK G+WREAELESW+DE   G+VVFRDDGSSA+LGI+ + LSEYA+I D+EES+ SSE+SDSSDYEEE P+GLGFLE TA Q+G+QTET IFAKWENHTRG+ASKMMANMGYREGMGLG SGQGM+ PI VKVLPPK SLD AL+++E D+D E + KKRSRGGKRKREKKFA AARAAK+ EE RPDVFSLIN QLAM   A+N G + K+Q+     EKK+DR+ALVAYDDE+KEL++RV KLEEMV RN+N+K V EAAMRKL ETRK LAEAEA HASAS+A++SKEKEKKWLKF
Sbjct:   37 PANPEILAVHEELVSAIRDVKEGLFHLKRARLLREVDSVVQKSD-SAVEDVKVESLDPNDVEAEPLEEQR-YSIGSKCRFRHSDGHWYNGQIVGLEGSQLAKISFLTPKTENMLICKFFLQQRCRFGTSCRLSHGVDVPLSSLKKFVPTSWEQSLVGSSIWATSDSKAGVWREAELESWDDECGLGQVVFRDDGSSAKLGIDCIALSEYAEIGDEEESDSSSEQSDSSDYEEEDPQGLGFLEITANQRGVQTETAIFAKWENHTRGIASKMMANMGYREGMGLGRSGQGMVEPIPVKVLPPKQSLDDALKSNEQDKDHESQAKKRSRGGKRKREKKFAAAARAAKDAEERRPDVFSLINTQLAMHGAALN-GKSAKKQQLKDSGEKKIDRQALVAYDDEMKELRMRVEKLEEMVVRNKNDKIVCEAAMRKLAETRKTLAEAEAAHASASHAIMSKEKEKKWLKF 497
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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A067KMH2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07061 PE=4 SV=1)

HSP 1 Score: 508.449 bits (1308), Expect = 4.796e-172
Identity = 354/507 (69.82%), Postives = 417/507 (82.25%), Query Frame = -1 
Query:  140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLE---------EDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633
            MA EEER +E+QLELQL+EQ +SLSAL+DALASDP N ++L+V EELV+ IK+ ++GLL+LKRARLLRE DSAL+ S              +DD++VEPL+         E++SY VGSKCRFRY+DGRWY+G+++ L GS +AK+SFLTPTSENMLICKFF QQRCRFG NCRLSHG DV LSSLKKY PTMW+ S+VGSSIWA  DS  GIWR+AELESW+D+L  GKVVFRDDGSSA+LG EA+TLS YA  SDD ES+ SS++SDSSDYEEE+ +GLGFL+S+ LQ+GIQTET IFAKWENHTRG+ASKMMANMGYR+GMGLGASGQGM++PI VKVLPPK SLDHAL++ + +E  E +GKKRSRGGKRKREKK A  AR A+ EEE  PDVFSLINNQLA  +EA+N G + K+ +     +KKVDR+ L+AYDDEVKEL++RV KLEEM SRN+ EK VYEAAMRKL ETRKALAEAEA HASASNAVVSKEKEKKWLKF
Sbjct:    1 MASEEERAIESQLELQLQEQEDSLSALNDALASDPSNLELLSVQEELVQAIKDAKDGLLHLKRARLLREVDSALHDSKHT-----------TDDIKVEPLDPNDFEPETLEEQSYSVGSKCRFRYNDGRWYNGKIIKLEGSNTAKVSFLTPTSENMLICKFFQQQRCRFGTNCRLSHGFDVSLSSLKKYIPTMWDQSLVGSSIWAASDSNAGIWRKAELESWDDKLGVGKVVFRDDGSSAKLGSEAMTLSVYALTSDDGESDSSSDQSDSSDYEEENAQGLGFLDSSTLQRGIQTETAIFAKWENHTRGIASKMMANMGYRDGMGLGASGQGMVDPIPVKVLPPKQSLDHALQSQKGEETGEDQGKKRSRGGKRKREKKLAALAREAEGEEEMEPDVFSLINNQLAKHNEALN-GGSAKKHQNNGSGDKKVDRRVLIAYDDEVKELRMRVDKLEEMASRNKKEKVVYEAAMRKLNETRKALAEAEAAHASASNAVVSKEKEKKWLKF 495
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: V4WAV2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008089mg PE=4 SV=1)

HSP 1 Score: 507.294 bits (1305), Expect = 1.788e-171
Identity = 343/499 (68.74%), Postives = 419/499 (83.97%), Query Frame = -1 
Query:  140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633
            MADEEERVLENQLE QL EQR+SL+AL+DA+ASDPFNP++  V +ELV+ IK+ EEGL +LKRARLLREAD  L+  +    +        +D VE EPLE+ R Y VGSKCRFRY+DGRWYDG+++ L  + SAK+SFL PTSENML+CKFFLQQRCRFG NCRLSHG+DVPLS LKKY PT WE S+VGS+IWA+ D KVGIWR+AEL SW+DE R G+VVFRDDGSSA+LGIEA+TLSEYAQ+SD+E+S+ SSE+SDSSDYEE+SP G+GF ES  L++G++ +T +FAKWENHTRG+ASKMMANMGYREGMGLGASGQG+L+P++VKVLPPK SLDHA+E H++ E K++K +K+   G R++ +K  AEA RAA++EEESRPDVFSLINNQL +  E +NG S K QQ KGS +EKK+ R+ LVAYDDE+K+L++RVVKLEEMV+RN+NEKAV+EAAMRKL ETRKALAEAEA  ASAS+ V S+EKEK+WLKF
Sbjct:    1 MADEEERVLENQLEQQLNEQRDSLTALNDAVASDPFNPELQEVLKELVQAIKDAEEGLFHLKRARLLREADLVLHGCSSRTEDVQAEPLDLAD-VEPEPLEDQR-YSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTLSEYAQMSDEEDSDFSSEQSDSSDYEEDSPHGVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQSKEGKDEKQRKKRSRGGRRKREKKFAEAVRAARDEEESRPDVFSLINNQLRVHHETINGSSPKMQQHKGSVKEKKISRRDLVAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNETRKALAEAEAAQASASHEVSSREKEKRWLKF 497
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A067FJ46_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010937mg PE=4 SV=1)

HSP 1 Score: 506.523 bits (1303), Expect = 3.354e-171
Identity = 342/499 (68.54%), Postives = 419/499 (83.97%), Query Frame = -1 
Query:  140 MADEEERVXXXXXXXXXXXXXXXXXXXXXXXXXDPFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1633
            MADEEERVLENQLE QL EQR+SL+AL+DA+ASDPFNP++  V +ELV+ IK+ EEGL +LKRARLLREAD  L+  +    +        +D VE EPLE+ R Y VGSKCRFRY+DGRWYDG+++ L  + SAK+SFL PTSENML+CKFFLQQRCRFG NCRLSHG+DVPLS LKKY PT WE S+VGS+IWA+ D KVGIWR+AEL SW+DE R G+VVFRDDGSSA+LGIEA+TLSEYAQ+SD+E+S+ SSE+SDSSDYEE+SP G+GF ES  L++G++ +T +FAKWENHTRG+ASKMMANMGYREGMGLGASGQG+L+P++VKVLPPK SLDHA+E H++ E K++K +K+   G R++ +K  AEA RAA++EEESRPDVFSLINNQL +  E +NG S K QQ KGS +EKK+ R+ LVAYDDE+K+L++RVVKLEEMV+RN+NEKAV+EAAMRKL ETRKALA+AEA  ASAS+ V S+EKEK+WLKF
Sbjct:    1 MADEEERVLENQLEQQLNEQRDSLTALNDAVASDPFNPELQEVLKELVQAIKDAEEGLFHLKRARLLREADLVLHGCSSRTEDVQAEPLDPAD-VEPEPLEDQR-YSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTLSEYAQMSDEEDSDFSSEQSDSSDYEEDSPHGVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQSKEGKDEKQRKKRSRGGRRKREKKFAEAVRAARDEEESRPDVFSLINNQLRVHHETINGSSPKMQQHKGSVKEKKISRRDLVAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNETRKALAQAEAAQASASHEVSSREKEKRWLKF 497
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: W9SNJ5_9ROSA (Zinc finger CCCH domain-containing protein 18 OS=Morus notabilis GN=L484_007138 PE=4 SV=1)

HSP 1 Score: 506.523 bits (1303), Expect = 3.566e-171
Identity = 327/469 (69.72%), Postives = 383/469 (81.66%), Query Frame = -1 
Query:  140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDD----VEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531
            P NP++LAV EELV+ IK+ EEGLL+LKRARLLREADS L  S     +  +AE   S D    VE EPLE D +Y VGSKCRFR++DGRWY+G++V ++G  SAKISFLTPTSENML+CKFFLQQRCRFG+NCRLSHGVDVPLSSLKKY  T+W+ S+VGS IWA  DSK  +WREAELESW+D L  GKVVFRDDGSSA LG EA+TLSEYA +S+DEES+ SS++SDSSD++EE  +GLGFL+ST LQ+GIQ ETTIFAKWENHTRGVASKMM+NMGYREGMGLG SGQGML+PISV+VLP K SLDHA+E+ E +E KE +G K+   G +++  K  A  +RAAKEEEE  PDVFSLINNQL   SEA+NG   K+QQ K S E +KVDR+ LVAYDDEVK+L++RV KLEEM+ RNR EK VYEAAMRKL ETRKALA+AEA H SASNAV+SKEKEK+WLKF
Sbjct:   36 PSNPELLAVSEELVQAIKDAEEGLLHLKRARLLREADSVLLGSGHDHKDVKEAEQQPSVDATENVEPEPLE-DPTYIVGSKCRFRHTDGRWYNGRIVAVDGFSSAKISFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGVDVPLSSLKKYILTIWDQSLVGSRIWASSDSKGDLWREAELESWDDLLGAGKVVFRDDGSSANLGDEAITLSEYADMSNDEESDSSSDQSDSSDFDEEGSQGLGFLDSTTLQRGIQKETTIFAKWENHTRGVASKMMSNMGYREGMGLGVSGQGMLDPISVRVLPAKQSLDHAVESLEGEESKENQGGKKRSRGGKRKRDKKFAALSRAAKEEEELAPDVFSLINNQLTKHSEALNGSVKKQQQNKDSLEGRKVDRRTLVAYDDEVKDLRMRVEKLEEMIHRNRKEKVVYEAAMRKLTETRKALADAEAAHTSASNAVISKEKEKRWLKF 503
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Match: A0A059CVZ3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C04032 PE=4 SV=1)

HSP 1 Score: 503.442 bits (1295), Expect = 4.060e-170
Identity = 336/464 (72.41%), Postives = 391/464 (84.27%), Query Frame = -1 
Query:  140 PFNPQILAVHXXXXXXXXXXXEGLLNLKRARLLREADSALNVSNQXXXXXXXXXXXESDDVEVEPLEEDRSYQVGSKCRFRYSDGRWYDGQVVTLNGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDVFSLINNQLAMQSEAVNXXXXXXXXXXXXXXXXKVDRKALVAYDDEVKELKLRVVKLEEMVSRNRNEKAVYEAAMRKLIETRKXXXXXXXXXXXXXXXXXSKEKEKKWLKF 1531
            P NP+ILAVHEELV  I++ +EGL +LKRARLLRE DS +  S+ +AVE+VK E+L+ +DVE EPLEE R Y +GSKCRFR+SDG WY+GQ+V L GS  AKISFLTP +ENMLICKFFLQQRCRFG +CRLSH  DVPLSSLKK+ PT WE S+VGSSIWA  DSK G+WREAELESW+DE   G+VVFRDDGSSA+LGI+ + LSEYA+I D+EES+ SSE+SDSSDYEEE P+GLGFLE TA Q+G+QTET IFAKWENHTRG+ASKMMANMGYREGMGLG SGQGM+ PI VKVLPPK SLD AL+++E D+D E + KKRSRGGKRKREKKFA AARAAK+ EE RPDVFSLIN QLAM   A+N G + K+Q+     EKK+DR+ALVAYDDE+KEL++RV KLEEMV RN+N+K V EAAMRKL ETRK LAEAEA HASAS+A++SKEKEKKWLKF
Sbjct:   37 PANPEILAVHEELVSAIRDVKEGLFHLKRARLLREVDSVVQKSD-SAVEDVKVESLDPNDVEAEPLEEQR-YSIGSKCRFRHSDGHWYNGQIVGLEGSQLAKISFLTPKTENMLICKFFLQQRCRFGTSCRLSH--DVPLSSLKKFVPTSWEQSLVGSSIWATSDSKAGVWREAELESWDDECGLGQVVFRDDGSSAKLGIDCIALSEYAEIGDEEESDSSSEQSDSSDYEEEDPQGLGFLEITANQRGVQTETAIFAKWENHTRGIASKMMANMGYREGMGLGRSGQGMVEPIPVKVLPPKQSLDDALKSNEQDKDHESQAKKRSRGGKRKREKKFAAAARAAKDAEERRPDVFSLINTQLAMHGAALN-GKSAKKQQLKDSGEKKIDRQALVAYDDEMKELRMRVEKLEEMVVRNKNDKIVCEAAMRKLAETRKTLAEAEAAHASASHAIMSKEKEKKWLKF 495
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_NEMVE (Zinc finger CCCH-type with G patch domain-containing protein OS=Nematostella vectensis GN=v1g244155 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.555e-17
Identity = 72/257 (28.02%), Postives = 113/257 (43.97%), Query Frame = -1 
Query:  584 GSKCRFRYSDGRW-----YDGQVVTLNG---------SGSAKISFLTPTSENMLICKFFLQQRCRF-GANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHENDE 1309
            G+KCR  ++   W     ++  V  L               ++ FL PT  +M+ C +FL+ +C+F GA CR SHG  V +  LK +    +     G    A      G+W  + ++S   E     + +    + A L ++ +      ++  D ES+  S+  DSS  +    +    +       G  +       WE HT+G+ SK+MA MGY  G GLG  G+G + PI V VLP   SLD   E  E ++
Sbjct:  112 GTKCRVAFTQ-EWGVKEHHNAMVFKLESIPLDEETVDQAKVRVLFLNPTHRSMVPCPYFLEGKCKFAGAECRFSHGYLVDVEHLKPFKEPDFSSVKAGQRCLARYSD--GVWYNSTIKSIKHESHEFLIHYETYNTDATLPLDDIYPLGPEEVESDSESDSQSDTGDSSSSKAAIEQDDDVIRYAWKPTGALSS---LGDWEQHTKGIGSKLMAKMGYIFGKGLGKDGEGRVEPIEVVVLPQGKSLDKCAELREKNK 362
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_BOVIN (Zinc finger CCCH-type with G patch domain-containing protein OS=Bos taurus GN=ZGPAT PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.525e-16
Identity = 65/223 (29.15%), Postives = 95/223 (42.60%), Query Frame = -1 
Query:  602 NGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWN--------DELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALE 1246
            +GS   ++ +L PT +++  C FFL+ +CRF  NCR SHG  V +  L+ +          GS+  A    + G+W  A +   +        D L   + V   D     L  E    S+      D+ S                      +E  A   G  T ++ FA WE HTRG+ S+++A MGY  G GLG   +G + P+   VLP   SLD   E
Sbjct:  161 DGSPGVRVLYLYPTHKSLKPCSFFLEGKCRFQENCRFSHGQVVSVDELRPFQDPDLSSLQAGSACLA--KRQDGLWYPARITDVDSGYYTVKFDSLLLKETVVEGDSILPPLRTEPAGSSDSDGSDADDPSYAR------------------VVEPGAANPG--TCSSAFAGWEVHTRGIGSRLLAKMGYEFGKGLGRHAEGRVEPVHAVVLPRGKSLDQCAE 361
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROER (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila erecta GN=GG10072 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.566e-16
Identity = 69/225 (30.67%), Postives = 104/225 (46.22%), Query Frame = -1 
Query:  593 KISFLTPTSENMLICKFFLQQRCRFG-ANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAV-PDSKVGIWREAELESWNDELRTGKVVFRDDGSSA-----ELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIF------AKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 1228
            ++ F  PT   ML C ++L+  CRF    CR SHG  V  SS++KY P  +        ++A+ PD    +W    +   N   +  +V  R DG        +   E L      Q  DDE S   S  S +++  +E+   +  LE     + ++     F        WE  TRG+ SK+M  MGY  G GLG+ G+G++ P+S ++LP   SLD  +E  E
Sbjct:  142 RVLFTNPTHREMLPCSYYLEGECRFDETKCRFSHGALVTGSSIRKYNPPDFHKLCRSRPVFALLPDR---LWHRGRVLCVNFVEQVCRV--RLDGQDHKERERDFKFEELYPLTTDQEEDDELSSEESNSSMNNESSDEAESDMDDLEEARRARMVELSLFTFKPTERLGAWEEFTRGIGSKLMEKMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELRE 361
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROPS (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila pseudoobscura pseudoobscura GN=GA18374 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.696e-16
Identity = 66/223 (29.60%), Postives = 103/223 (46.19%), Query Frame = -1 
Query:  593 KISFLTPTSENMLICKFFLQQRCRFGA-NCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWA-VPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSE-YAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFA--------KWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 1228
            ++ ++ PT   ML C ++L+  CRF    CR SHG  VP +S+K Y P  +        + A +PD    +W    +   N   +T +V  R DG   +         E +  I++ E+   S + S S   E          +  A  +    E ++F          WE +TRG+ SK+M  MGY  G GLG+ G+G++ P+S ++LP   SLD  +E  E
Sbjct:  142 RVLYINPTHCEMLPCNYYLEGECRFDEIRCRYSHGALVPGASIKSYIPPDFPRLARNCPVLAKMPDR---LWHRGRVLCANFVEQTCRV--RLDGQDHKERERDFQFEELFPLITEKEDELTSEDSSSSPHDESSDEIDSDMDDLEAAHRSRMVELSLFTFKPTEKLGAWEQYTRGIGSKLMEKMGYIHGTGLGSEGRGIVTPVSAQILPQGRSLDACMELRE 359
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROPE (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila persimilis GN=GL18949 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.480e-16
Identity = 66/223 (29.60%), Postives = 104/223 (46.64%), Query Frame = -1 
Query:  593 KISFLTPTSENMLICKFFLQQRCRFGA-NCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWA-VPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSE-YAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFA--------KWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 1228
            ++ ++ PT   ML C ++L+  CRF    CR SHG  VP +S+K Y P  +        + A +PD    +W    +   N   +T +V  R DG   +         E +  I+++E+   S + S S   E          +  A  +    E ++F          WE +TRG+ SK+M  MGY  G GLG+ G+G++ P+S ++LP   SLD  +E  E
Sbjct:  142 RVLYINPTHCEMLPCNYYLEGECRFDEIRCRYSHGALVPGASIKSYIPPDFPRLARNCPVLAKMPDR---LWHRGRVLCANFVEQTCRV--RLDGQDHKERERDFQFEELFPLITEEEDGLTSEDSSSSPHDESSDEIDSDMDDLEAAHRSRMVELSLFTFKPTEKLGAWEQYTRGIGSKLMEKMGYIHGTGLGSEGRGIVTPVSAQILPQGRSLDACMELRE 359
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_SHEEP (Zinc finger CCCH-type with G patch domain-containing protein OS=Ovis aries GN=ZGPAT PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.341e-16
Identity = 64/223 (28.70%), Postives = 94/223 (42.15%), Query Frame = -1 
Query:  602 NGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWN--------DELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALE 1246
            +GS   ++ +L PT +++  C FFL+ +CRF  NCR SHG  V +  L+ +          GS+  A    + G+W  A +   +        D L   + V   D     L  +    S+      D+ S                      +E  A   G  T ++ FA WE HTRG+ S+++A MGY  G GLG    G + P+   VLP   SLD   E
Sbjct:  161 DGSPGVRVLYLYPTHKSLKPCPFFLEGKCRFQENCRFSHGQVVSVDELRPFQDPDLSSLQAGSACLA--KRQDGLWYPARITDVDSGYYTVKFDSLLLKEAVVEGDSILPPLRTDPAGSSDSDGSDADDPSYAR------------------VVEPGAANPG--TCSSAFAGWEVHTRGIGSRLLAKMGYEFGKGLGRRADGRVEPVHAVVLPRGKSLDQCAE 361
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DANRE (Zinc finger CCCH-type with G patch domain-containing protein OS=Danio rerio GN=zgpat PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.420e-15
Identity = 63/205 (30.73%), Postives = 97/205 (47.32%), Query Frame = -1 
Query:  614 KISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTETTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLD 1228
            ++ ++ PT ++M  C F+L+ +CRF  NCR SHG  V +S L+ +          GS+  A  +   GIW  A +     E+  G    + D     L ++   L     I    + ++SS  S  S+ + E   G   + ++  +   Q  T  F  WE HTRG+ SK++  MGY  G GLG +  G + P+   VLP   SLD
Sbjct:  156 RVFYIHPTHKSMKPCGFYLEGKCRFMDNCRYSHGEVVCVSELRDFLEADISNMESGSACLAKHED--GIWYPARI----SEIEGGFYTVKFDS----LLLKEAVLEADGIIPPLRQDDVSSSSSSDSEDDAECDGGYAKVFTSREEDLAQVNTAEFCGWEAHTRGIGSKLLMKMGYELGKGLGKTLSGRVEPVQAVVLPKGHSLD 350
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_XENLA (Zinc finger CCCH-type with G patch domain-containing protein OS=Xenopus laevis GN=zgpat PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.953e-15
Identity = 65/224 (29.02%), Postives = 95/224 (42.41%), Query Frame = -1 
Query:  593 NGSGSAKISFLTPTSENMLICKFFLQQRCRFGANCRLSHGVDVPLSSLKKYAPTMWEPSMVGSSIWAVPDSKVGIWREAELESWNDELRTGKVVFRDDGSSAELGIEALTLSEYAQIXXXXXXXXXXXXXXXXXXXXXSPKGLGFLESTALQKGIQTE------TTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 1246
            +G    ++ +L PT + M  C FFL  +C F  NCR SHG  V ++ L+ +         V S   A  +   GIW  A +        T K              ++L L E   + + +        SDSS       +  G  E +   K +  E      ++ F  WE HTRG+ SK++  MGY  G GLG + +G + PI   VLP   SLD  +E  +
Sbjct:  169 DGEAGVRVLYLYPTHKAMKPCPFFLDGKCLFNDNCRFSHGQVVSVTELQPFKEADLGSLAVDSPCLAQHND--GIWYPARITDIESGFYTVK-------------FDSLLLKE--SVLEADSIIPPLRGSDSSSSSSSDEEEDGAAEDSVYAKVLGQEIAGTTCSSEFGGWEAHTRGIGSKLLVRMGYEFGKGLGRNAEGRVEPIQAVVLPKGKSLDQCMEIQQ 375
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROGR (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila grimshawi GN=GH11061 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.913e-11
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = -1 
Query:  593 TTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 772
            T     WE +TRG+ SK+MANMGY  G GLG+ G+G++ P+S ++LP   SLD  +E  E
Sbjct:  303 TEKLGAWEQYTRGIGSKLMANMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELRE 362
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Match: ZGPAT_DROMO (Zinc finger CCCH-type with G patch domain-containing protein OS=Drosophila mojavensis GN=GI17578 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.020e-11
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = -1 
Query:  593 TTIFAKWENHTRGVASKMMANMGYREGMGLGASGQGMLNPISVKVLPPKLSLDHALETHE 772
            T     WE +TRG+ SK+MANMGY  G GLG+ G+G++ P+S ++LP   SLD  +E  E
Sbjct:  300 TERLGAWEQYTRGIGSKLMANMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELRE 359
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0PID8_GOSAR0.000e+0100.00Uncharacterized protein OS=Gossypium arboreum GN=F... [more]
A0A0D2TKM9_GOSRA0.000e+098.19Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061GHH1_THECC0.000e+086.37Zinc finger family protein / D111/G-patch domain-c... [more]
F6H3K0_VITVI1.355e-17973.71Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A059CWQ2_EUCGR1.736e-17372.84Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A067KMH2_JATCU4.796e-17269.82Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
V4WAV2_9ROSI1.788e-17168.74Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067FJ46_CITSI3.354e-17168.54Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
W9SNJ5_9ROSA3.566e-17169.72Zinc finger CCCH domain-containing protein 18 OS=M... [more]
A0A059CVZ3_EUCGR4.060e-17072.41Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0008189 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ZGPAT_NEMVE5.555e-1728.02Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_BOVIN1.525e-1629.15Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_DROER1.566e-1630.67Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_DROPS2.696e-1629.60Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_DROPE3.480e-1629.60Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_SHEEP6.341e-1628.70Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_DANRE2.420e-1530.73Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_XENLA2.953e-1529.02Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_DROGR1.913e-1148.33Zinc finger CCCH-type with G patch domain-containi... [more]
ZGPAT_DROMO2.020e-1148.33Zinc finger CCCH-type with G patch domain-containi... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 247..267
NoneNo IPR availableCOILSCoilCoilcoord: 427..454
NoneNo IPR availableCOILSCoilCoilcoord: 1..30
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availableCOILSCoilCoilcoord: 458..478
NoneNo IPR availableGENE3D2.30.30.140coord: 106..139
e-value: 8.6E-5
score: 21.7
NoneNo IPR availablePANTHERPTHR23329TUFTELIN-INTERACTING PROTEIN 11-RELATEDcoord: 59..492
NoneNo IPR availablePANTHERPTHR23329:SF2ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEINcoord: 59..492
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 296..342
e-value: 2.3E-14
score: 63.7
IPR000467G-patch domainPFAMPF01585G-patchcoord: 298..339
e-value: 8.4E-13
score: 47.9
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 298..344
score: 13.143
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 144..170
e-value: 1.0E-4
score: 31.7
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 144..171
score: 14.164
IPR000571Zinc finger, CCCH-typeSUPERFAMILY90229CCCH zinc fingercoord: 145..169

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0008189 ID=g.arboreum_cottongen_reftransV1_0008189; Name=g.arboreum_cottongen_reftransV1_0008189; organism=Gossypium arboreum; type=contig; length=1642bp
AAAAAAAGTCCCAACAGAAAAGGAGAGAAGAAGCCAAATCTAATTTTAGT
TCATTTCTTTCCCTTTTTTATGGGGTAAAATCTATTACCAAACAATGCAT
AATTTGTAACTAGTCCAACATAAATATTACATAATATCAAAACTTTAGCC
ACTTTTTCTCTTTTTCTTTGCTAACGACTGCATTTGATGCTGAGGCATGA
ACTGCTTCAGCCTCCGCCAAAGCCTTACGAGTCTCGATTAATTTCCTCAT
GGCAGCCTCGTAAACAGCTTTCTCATTTCTGTTTCTGCTTACCATTTCCT
CGAGCTTTACAACTCGTAACTTTAGTTCCTTCACTTCATCATCATAAGCA
ACCAATGCCTTTCTATCAACTTTCTTCTCCTCTCCTGAACCTTTCTTTTG
TTGTTTCTTTGTTGATCCACCATTTACAGCCTCACTTTGCATTGCAAGTT
GGTTGTTGATGAGGCTAAAAACATCTGGTCTTGATTCCTCTTCTTCTTTA
GCAGCCCGAGCGGCTTCAGCGAATTTCTTCTCACGCTTTCTCTTGCCACC
TCTGCTTCGTTTCTTCCCTTTTTTCTCTTTATCCTCATCGTTCTCATGAG
TCTCCAGAGCATGATCAAGTGATAGCTTAGGAGGAAGGACTTTAACTGAG
ATCGGATTTAACATCCCCTGGCCAGATGCACCTAAACCCATCCCTTCACG
GTAACCCATATTGGCCATCATCTTAGAAGCTACACCCCTGGTATGATTTT
CCCACTTAGCAAAGATGGTAGTTTCTGTCTGGATACCTTTCTGTAGAGCA
GTGCTTTCAAGAAAACCTAAACCCTTTGGGCTCTCCTCTTCGTAGTCACT
AGAATCAGATTCTTCAGAGCTTAGTTCACTTTCTTCATCATCACTTATTT
GTGCATATTCAGATAATGTCAAAGCTTCTATCCCAAGCTCTGCAGAGCTT
CCATCATCCCGGAAAACAACCTTCCCCGTTCTGAGTTCATCATTCCATGA
TTCAAGTTCAGCTTCCCTCCAGATGCCAACTTTACTATCAGGGACTGCCC
AAATACTGGACCCAACCATCGATGGCTCCCACATGGTTGGAGCATACTTC
TTCAGCGAAGATAATGGGACATCCACTCCATGCGATAAGCGGCAATTAGC
ACCAAATCGACATCTTTGTTGCAGAAAGAACTTGCATATCAACATATTTT
CTGAAGTAGGTGTGAGGAAAGATATTTTCGCCGAACCAGAACCGTTCAAT
GTGACAACCTGACCATCATACCACCGGCCGTCACTGTAACGGAATCGACA
TTTCGACCCGACCTGATAACTCCGATCTTCCTCCAATGGTTCAACTTCCA
CATCATCTGATTCAAGAGCCTCCGCTTTAACCTCCTCAACCGCTGCTTGA
TTCGAAACATTTAACGCTGAATCAGCTTCTCGAAGTAAACGCGCGCGCTT
AAGATTAAGAAGCCCCTCCTCTGTCTCTTTGATTACCTCAACAAGCTCCT
CGTGAACCGCGAGGATCTGGGGATTGAAAGGATCAGAAGCGAGAGCATCG
TCTAAGGCAGAGAGGGATTCTCTTTGCTCTTTCAATTGAAGCTCCAACTG
GTTCTCTAGAACTCTCTCTTCTTCGTCTGCCATTGTTGTTTT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding