g.arboreum_cottongen_reftransV1_0016658, g.arboreum_cottongen_reftransV1_0016658 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: A0A067EF57_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022958mg PE=4 SV=1) HSP 1 Score: 462.611 bits (1189), Expect = 4.185e-157 Identity = 246/289 (85.12%), Postives = 267/289 (92.39%), Query Frame = 2 Query: 56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922 MN NN+KVPK+PGGGA AL+K+G+IGG+GLY ANSLYNV+GGHRAI+FNRI G+KDKVY EGTHLM+PWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRP + +L +YR LGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILTERAA FNI LDDVSITSLTFGKEFT+AIEAKQVAAQEAERAK+IVEKAEQDK+SA+IRAQGEA SAQLIGQAIA NPAFITLRKIEA+REIAQTIA+SANKVFLNS DLLLNLQEM LE K Sbjct: 1 MNFNNVKVPKVPGGGAASALIKVGIIGGIGLYAAANSLYNVEGGHRAIMFNRITGVKDKVYPEGTHLMVPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVADKLPTVYRALGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAANFNIALDDVSITSLTFGKEFTSAIEAKQVAAQEAERAKYIVEKAEQDKRSAIIRAQGEATSAQLIGQAIANNPAFITLRKIEAAREIAQTIAHSANKVFLNSDDLLLNLQEMKLEGAKK 289
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: V4U237_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016485mg PE=4 SV=1) HSP 1 Score: 462.611 bits (1189), Expect = 4.185e-157 Identity = 246/289 (85.12%), Postives = 267/289 (92.39%), Query Frame = 2 Query: 56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922 MN NN+KVPK+PGGGA AL+K+G+IGG+GLY ANSLYNV+GGHRAI+FNRI G+KDKVY EGTHLM+PWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRP + +L +YR LGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILTERAA FNI LDDVSITSLTFGKEFT+AIEAKQVAAQEAERAK+IVEKAEQDK+SA+IRAQGEA SAQLIGQAIA NPAFITLRKIEA+REIAQTIA+SANKVFLNS DLLLNLQEM LE K Sbjct: 1 MNFNNVKVPKVPGGGAASALIKVGIIGGIGLYAAANSLYNVEGGHRAIMFNRITGVKDKVYPEGTHLMVPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVADKLPTVYRALGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAANFNIALDDVSITSLTFGKEFTSAIEAKQVAAQEAERAKYIVEKAEQDKRSAIIRAQGEATSAQLIGQAIANNPAFITLRKIEAAREIAQTIAHSANKVFLNSDDLLLNLQEMKLEGAKK 289
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: A5BVI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018854 PE=4 SV=1) HSP 1 Score: 461.84 bits (1187), Expect = 6.375e-157 Identity = 247/286 (86.36%), Postives = 266/286 (93.01%), Query Frame = 2 Query: 56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLES 913 MN NN+K PK+PGGGA AL+K+GV+GGLGLYG NSLYNV+GGHRAIVFNRI+G+KDKVY EGTHLMIPWF+RP+IYDVR RPHLVESTSGS DLQMVKIGLRVLTRP QL IYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRK+LTERAA FNI LDDVSITSLTFG+EFTAAIEAKQVAAQEAERAKF+VEKAEQDK+SA+IRAQGEAKSAQLIGQAIA NPAFITLRKIEASREIA TI+NSANKVFLNS DLLLNLQEM+L+S Sbjct: 1 MNFNNIKAPKVPGGGAASALIKLGVVGGLGLYGAINSLYNVEGGHRAIVFNRIVGVKDKVYPEGTHLMIPWFDRPVIYDVRTRPHLVESTSGSHDLQMVKIGLRVLTRPLPDQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKLLTERAANFNIALDDVSITSLTFGREFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAIIRAQGEAKSAQLIGQAIANNPAFITLRKIEASREIAHTISNSANKVFLNSNDLLLNLQEMNLQS 286
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: S8D3B8_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_02867 PE=4 SV=1) HSP 1 Score: 461.455 bits (1186), Expect = 8.345e-157 Identity = 234/280 (83.57%), Postives = 259/280 (92.50%), Query Frame = 2 Query: 56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQ 895 +N++ + +P +PGG A AL+K+GV+ GLG+YG++NSLYNV+GGHRAIVFNRI+GIKDKVY EGTH +IPWFERP+IYDVRARPHLVESTSGSRDLQMVKI LRVLTRP QL IYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVS+EIRKILTERA YFNI LDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKF+V+KAEQDKKSAVIRAQGEAKSAQLIGQAIA NPAFITLR+IEASR+I+ IANSAN+V+LNS DLL+NLQ Sbjct: 1 LNMSTVNIPNLPGGRAASALIKLGVVAGLGVYGLSNSLYNVEGGHRAIVFNRIVGIKDKVYPEGTHFVIPWFERPVIYDVRARPHLVESTSGSRDLQMVKISLRVLTRPVPDQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSREIRKILTERATYFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVDKAEQDKKSAVIRAQGEAKSAQLIGQAIANNPAFITLRRIEASRDISHVIANSANRVYLNSDDLLINLQ 280
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: M0TNP2_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 461.07 bits (1185), Expect = 1.366e-156 Identity = 237/289 (82.01%), Postives = 256/289 (88.58%), Query Frame = 2 Query: 56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922 M+ N+KVP +PG GA AL+K+ +IGG +Y NS+YNVDGGHRAIVFNRI GIKDKVY EGTHLMIPWFERPIIYDVRARP+LVESTSGSRDLQMVKIGLRVLTRP QL IYR+LGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILTERA FNI LDDVSITSL+FGKEFT AIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIA NPAF+ LR+IEA+REIA TIANS+N+VFL S DLLLNLQE++ E K Sbjct: 1 MSFRNVKVPNIPGSGASAALVKVALIGGTVVYAALNSIYNVDGGHRAIVFNRIEGIKDKVYPEGTHLMIPWFERPIIYDVRARPNLVESTSGSRDLQMVKIGLRVLTRPLPDQLPTIYRSLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERARNFNIALDDVSITSLSFGKEFTNAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIANNPAFLALRQIEAAREIAHTIANSSNRVFLQSNDLLLNLQELNFEGTTK 289
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB1_ARATH (Prohibitin-1, mitochondrial OS=Arabidopsis thaliana GN=PHB1 PE=1 SV=1) HSP 1 Score: 449.514 bits (1155), Expect = 5.185e-154 Identity = 243/287 (84.67%), Postives = 269/287 (93.73%), Query Frame = 2 Query: 62 LNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922 +NN+KVPK+PGGGA+ LLK+G+IGGLGLYG +SLYNV+GGHRAI+FNR++GIKDKVY EGTHLMIPWFERP+IYDVRARP+LVESTSGSRDLQMVKIGLRVLTRP + QL EIYR+LGENY+ERVLPSII+ETLKAVVAQYNASQLITQRE VS+EIRKILTERAA FN+ LDDVSIT+LTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDK+SAVIRAQGEAKSAQLIGQAIA N AFITLRKIEA+REIAQTIANSANKV+L+S DLLLNLQ M+L+ K Sbjct: 1 MNNVKVPKIPGGGAISTLLKVGIIGGLGLYGATHSLYNVEGGHRAIMFNRLVGIKDKVYPEGTHLMIPWFERPVIYDVRARPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEIYRSLGENYSERVLPSIINETLKAVVAQYNASQLITQREAVSREIRKILTERAANFNVALDDVSITNLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNQAFITLRKIEAAREIAQTIANSANKVYLSSDDLLLNLQGMNLDVDAK 287
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB6_ARATH (Prohibitin-6, mitochondrial OS=Arabidopsis thaliana GN=PHB6 PE=1 SV=1) HSP 1 Score: 441.81 bits (1135), Expect = 4.522e-151 Identity = 230/289 (79.58%), Postives = 255/289 (88.24%), Query Frame = 2 Query: 56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922 MN N+KVPK PGGG + A++ G+ ++LYNVDGGHRAIVFNR++GIKDKVY EGTHLMIPWFERPIIYDVRA+P+LVESTSGSRDLQMVKIGLRVLTRP + QL E+YR+LGENY ERVLPSIIHETLKAVVAQYNASQLITQRE+VS+EIRKILT RAA F+I LDDVSIT LTFGKEFTAAIE KQVAAQEAERAKFIVEKAEQDK+SAVIRA+GEAKSAQLIGQAIA N AF+TLRKIEA+REIAQTI+ SANKV+L+S DLLLNLQ MDL+ PK Sbjct: 1 MNFKNVKVPKGPGGGVIAAVVIGGLSLYGA----THTLYNVDGGHRAIVFNRLVGIKDKVYPEGTHLMIPWFERPIIYDVRAKPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEVYRSLGENYRERVLPSIIHETLKAVVAQYNASQLITQRESVSREIRKILTLRAANFHIALDDVSITGLTFGKEFTAAIEGKQVAAQEAERAKFIVEKAEQDKRSAVIRAEGEAKSAQLIGQAIANNQAFLTLRKIEAAREIAQTISRSANKVYLSSNDLLLNLQAMDLDVKPK 285
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_ARATH (Prohibitin-2, mitochondrial OS=Arabidopsis thaliana GN=PHB2 PE=1 SV=1) HSP 1 Score: 432.565 bits (1111), Expect = 2.321e-147 Identity = 235/285 (82.46%), Postives = 260/285 (91.23%), Query Frame = 2 Query: 56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLE 910 M+ N KVP +PG AL ALLK+ VIGGLG+Y + NSLYNVDGGHRA++FNR+ GIK+KVY EGTH M+PWFERPIIYDVRARP+LVEST+GS DLQMVKIGLRVLTRP +L +IYRTLGENY+ERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILTERA+ F+I LDDVSIT+LTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQD++SAVIRAQGEAKSAQLIGQAIA N AFITLRKIEA+REIAQTIA SANKV+L+S DLLLNLQEM+LE Sbjct: 1 MSFN--KVPNIPGAPALSALLKVSVIGGLGVYALTNSLYNVDGGHRAVMFNRLTGIKEKVYPEGTHFMVPWFERPIIYDVRARPYLVESTTGSHDLQMVKIGLRVLTRPMGDRLPQIYRTLGENYSERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERASNFDIALDDVSITTLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDRRSAVIRAQGEAKSAQLIGQAIANNQAFITLRKIEAAREIAQTIAQSANKVYLSSNDLLLNLQEMNLE 283
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB7_ARATH (Prohibitin-7, mitochondrial OS=Arabidopsis thaliana GN=PHB7 PE=1 SV=1) HSP 1 Score: 403.29 bits (1035), Expect = 4.188e-136 Identity = 218/278 (78.42%), Postives = 240/278 (86.33%), Query Frame = 2 Query: 62 LNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQ 895 +N KVP +PG AL ALLK+GVIGGLGLY + +S+YNVDGGHRAIVFNR GIKD+VY EGTH IP FER IIYDVR+RP++ S +GS DLQ V IGLRVLTRP +L EIYRTLG+NY ERVLPSII+ETLKAVVAQYNAS LITQRE VS+EIRKI+TERAA FNI LDDVSIT+L FGKEFT AIE KQVAAQEAERAKFIVEKAEQDKKSA+IRAQGEAKSAQLIGQAIA N AFITLRKIEA+REIAQTIA SANKV+LNS DLL++ Q Sbjct: 1 MNVKKVPNVPGSPALSALLKLGVIGGLGLYCIGSSMYNVDGGHRAIVFNRFTGIKDRVYPEGTHFKIPLFERAIIYDVRSRPYVENSQTGSNDLQTVTIGLRVLTRPMGDRLPEIYRTLGQNYGERVLPSIINETLKAVVAQYNASHLITQREAVSREIRKIVTERAAKFNIALDDVSITNLKFGKEFTEAIEKKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAQLIGQAIANNEAFITLRKIEAAREIAQTIAKSANKVYLNSSDLLISKQ 278
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_DICDI (Prohibitin-2 OS=Dictyostelium discoideum GN=phbB PE=3 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 1.502e-106 Identity = 156/253 (61.66%), Postives = 207/253 (81.82%), Query Frame = 2 Query: 164 SLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922 SL NV+GGHRAIVFNR +GIK+KVY+EGTH ++PWFER IYDVRA+P + S +GS+DLQMV I +RVL++PK +QL IYRTLG++Y+ERVLPSI++E LK++VAQ+NASQLITQRE VS+ I K L +RA FNI+LDDVSIT L FG+E+ AAIEAKQVA QEAERA+F+VEKA QDK+S +++A+GEA+SAQLI AI ++P + LR +EAS+EIA ++ S NK++++++ LLLN +++ PK Sbjct: 40 SLVNVEGGHRAIVFNRFVGIKNKVYNEGTHFIVPWFERAEIYDVRAKPRSISSLTGSKDLQMVNITIRVLSKPKVSQLPAIYRTLGKDYDERVLPSIVNEILKSIVAQFNASQLITQREQVSRLIFKRLVDRAKDFNIELDDVSITHLNFGREYAAAIEAKQVAQQEAERARFLVEKALQDKRSIIVKAEGEAQSAQLINDAIKQSPYLVQLRTLEASKEIAHILSKSPNKLYISNETLLLNGFDLNNNQQPK 292
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_YEAST (Prohibitin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHB2 PE=1 SV=2) HSP 1 Score: 311.997 bits (798), Expect = 4.676e-100 Identity = 145/243 (59.67%), Postives = 198/243 (81.48%), Query Frame = 2 Query: 161 NSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLN 889 N+L+NVDGGHRAIV++RI G+ ++++EGTH + PW + PIIYDVRA+P V S +G++DLQMV I RVL+RP QL IYRTLG++Y+ERVLPSI++E LKAVVAQ+NASQLITQRE VS+ IR+ L RA+ FNI LDDVSIT +TF EFT A+EAKQ+A Q+A+RA F+V+KA Q+K+ V+RAQGEAKSA+LIG+AI K+ ++ L++++ +R+IA+ +A+S N+V L+++ LLLN Sbjct: 56 NALFNVDGGHRAIVYSRIHGVSSRIFNEGTHFIFPWLDTPIIYDVRAKPRNVASLTGTKDLQMVNITCRVLSRPDVVQLPTIYRTLGQDYDERVLPSIVNEVLKAVVAQFNASQLITQREKVSRLIRENLVRRASKFNILLDDVSITYMTFSPEFTNAVEAKQIAQQDAQRAAFVVDKARQEKQGMVVRAQGEAKSAELIGEAIKKSRDYVELKRLDTARDIAKILASSPNRVILDNEALLLN 298
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_XENTR (Prohibitin-2 OS=Xenopus tropicalis GN=phb2 PE=2 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 1.477e-97 Identity = 142/246 (57.72%), Postives = 201/246 (81.71%), Query Frame = 2 Query: 164 SLYNVDGGHRAIVFNRILGIK-DKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQE 898 S++ V+GGHRAI FNRI G++ D + +EG H PWF+ PIIYD+RARP + S +GS+DLQMV I LRVL+RP +++L +Y+ LG +Y+ERVLPSI++E LK+VVA++NASQLITQR VS IR+ LTERA F+I LDDV+IT L+F +E+TAA+E+KQVA QEA+RA+F+VEKA+QD+K +++A+GEA +A++IG A++KNP ++ LR+I A++ IA+TIA+S N+V+LN+ L+LNLQ+ Sbjct: 39 SVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRFPWFQYPIIYDIRARPRKISSPTGSKDLQMVNITLRVLSRPLASELPFMYQRLGLDYDERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSIILDDVAITELSFSREYTAAVESKQVAQQEAQRAQFLVEKAKQDQKQKIVQAEGEAAAAKMIGDALSKNPGYLKLRRIRAAQSIAKTIASSQNRVYLNADSLVLNLQD 284
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_CAEEL (Mitochondrial prohibitin complex protein 2 OS=Caenorhabditis elegans GN=phb-2 PE=1 SV=2) HSP 1 Score: 302.753 bits (774), Expect = 9.314e-97 Identity = 140/247 (56.68%), Postives = 191/247 (77.33%), Query Frame = 2 Query: 164 SLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMD 904 S++ V+ GHRAI+FNRI G+ +Y EG H IPWF+ PIIYD+RARP+ + S +GS+DLQMV IGLRVL+RP L IYRTLG+N+ ERVLPSI +E LK VVA++NASQLITQR+ VS +RK L ERA FNI LDDVS+T L F +++AA+EAKQVAAQEA+RA F VE+A+Q K+ +++A+GEA+SA+L+G+A+ +P F+ LRKI A+++IA+ ++ S NK +L + L+LN+ + D Sbjct: 39 SMFTVEAGHRAIMFNRIGGLSTDLYKEGLHFRIPWFQYPIIYDIRARPNQIRSPTGSKDLQMVNIGLRVLSRPNPEHLVHIYRTLGQNWEERVLPSICNEVLKGVVAKFNASQLITQRQQVSMLVRKTLIERALDFNIILDDVSLTELAFSPQYSAAVEAKQVAAQEAQRATFYVERAKQQKQEKIVQAEGEAESAKLLGEAMKNDPGFLKLRKIRAAQKIARIVSESGNKTYLPTGGLMLNIADTD 285
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_RAT (Prohibitin-2 OS=Rattus norvegicus GN=Phb2 PE=1 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 1.974e-96 Identity = 139/246 (56.50%), Postives = 201/246 (81.71%), Query Frame = 2 Query: 164 SLYNVDGGHRAIVFNRILGIK-DKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQE 898 S++ V+GGHRAI FNRI G++ D + +EG H IPWF+ PIIYD+RARP + S +GS+DLQMV I LRVL+RP + +L +Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR VS IR+ LTERA F++ LDDV+IT L+F +E+TAA+EAKQVA QEA+RA+F+VEKA+Q+++ +++A+GEA++A+++G+A++KNP +I LRKI A++ I++TIA S N+++L + +L+LNLQ+ Sbjct: 39 SVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQD 284
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_BOVIN (Prohibitin-2 OS=Bos taurus GN=PHB2 PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 2.151e-96 Identity = 139/246 (56.50%), Postives = 201/246 (81.71%), Query Frame = 2 Query: 164 SLYNVDGGHRAIVFNRILGIK-DKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQE 898 S++ V+GGHRAI FNRI G++ D + +EG H IPWF+ PIIYD+RARP + S +GS+DLQMV I LRVL+RP + +L +Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR VS IR+ LTERA F++ LDDV+IT L+F +E+TAA+EAKQVA QEA+RA+F+VEKA+Q+++ +++A+GEA++A+++G+A++KNP +I LRKI A++ I++TIA S N+++L + +L+LNLQ+ Sbjct: 39 SVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAMELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAARMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQD 284 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0016658 ID=g.arboreum_cottongen_reftransV1_0016658; Name=g.arboreum_cottongen_reftransV1_0016658; organism=Gossypium arboreum; type=contig; length=1639bpback to top |