g.arboreum_cottongen_reftransV1_0016658, g.arboreum_cottongen_reftransV1_0016658 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: A0A067EF57_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022958mg PE=4 SV=1) HSP 1 Score: 462.611 bits (1189), Expect = 4.185e-157 Identity = 246/289 (85.12%), Postives = 267/289 (92.39%), Query Frame = 2 Query: 56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922 MN NN+KVPK+PGGGA AL+K+G+IGG+GLY ANSLYNV+GGHRAI+FNRI G+KDKVY EGTHLM+PWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRP + +L +YR LGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILTERAA FNI LDDVSITSLTFGKEFT+AIEAKQVAAQEAERAK+IVEKAEQDK+SA+IRAQGEA SAQLIGQAIA NPAFITLRKIEA+REIAQTIA+SANKVFLNS DLLLNLQEM LE K Sbjct: 1 MNFNNVKVPKVPGGGAASALIKVGIIGGIGLYAAANSLYNVEGGHRAIMFNRITGVKDKVYPEGTHLMVPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVADKLPTVYRALGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAANFNIALDDVSITSLTFGKEFTSAIEAKQVAAQEAERAKYIVEKAEQDKRSAIIRAQGEATSAQLIGQAIANNPAFITLRKIEAAREIAQTIAHSANKVFLNSDDLLLNLQEMKLEGAKK 289
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: V4U237_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016485mg PE=4 SV=1) HSP 1 Score: 462.611 bits (1189), Expect = 4.185e-157 Identity = 246/289 (85.12%), Postives = 267/289 (92.39%), Query Frame = 2 Query: 56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922 MN NN+KVPK+PGGGA AL+K+G+IGG+GLY ANSLYNV+GGHRAI+FNRI G+KDKVY EGTHLM+PWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRP + +L +YR LGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILTERAA FNI LDDVSITSLTFGKEFT+AIEAKQVAAQEAERAK+IVEKAEQDK+SA+IRAQGEA SAQLIGQAIA NPAFITLRKIEA+REIAQTIA+SANKVFLNS DLLLNLQEM LE K Sbjct: 1 MNFNNVKVPKVPGGGAASALIKVGIIGGIGLYAAANSLYNVEGGHRAIMFNRITGVKDKVYPEGTHLMVPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVADKLPTVYRALGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAANFNIALDDVSITSLTFGKEFTSAIEAKQVAAQEAERAKYIVEKAEQDKRSAIIRAQGEATSAQLIGQAIANNPAFITLRKIEAAREIAQTIAHSANKVFLNSDDLLLNLQEMKLEGAKK 289
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: A5BVI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018854 PE=4 SV=1) HSP 1 Score: 461.84 bits (1187), Expect = 6.375e-157 Identity = 247/286 (86.36%), Postives = 266/286 (93.01%), Query Frame = 2 Query: 56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLES 913 MN NN+K PK+PGGGA AL+K+GV+GGLGLYG NSLYNV+GGHRAIVFNRI+G+KDKVY EGTHLMIPWF+RP+IYDVR RPHLVESTSGS DLQMVKIGLRVLTRP QL IYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRK+LTERAA FNI LDDVSITSLTFG+EFTAAIEAKQVAAQEAERAKF+VEKAEQDK+SA+IRAQGEAKSAQLIGQAIA NPAFITLRKIEASREIA TI+NSANKVFLNS DLLLNLQEM+L+S Sbjct: 1 MNFNNIKAPKVPGGGAASALIKLGVVGGLGLYGAINSLYNVEGGHRAIVFNRIVGVKDKVYPEGTHLMIPWFDRPVIYDVRTRPHLVESTSGSHDLQMVKIGLRVLTRPLPDQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKLLTERAANFNIALDDVSITSLTFGREFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAIIRAQGEAKSAQLIGQAIANNPAFITLRKIEASREIAHTISNSANKVFLNSNDLLLNLQEMNLQS 286
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: S8D3B8_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_02867 PE=4 SV=1) HSP 1 Score: 461.455 bits (1186), Expect = 8.345e-157 Identity = 234/280 (83.57%), Postives = 259/280 (92.50%), Query Frame = 2 Query: 56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQ 895 +N++ + +P +PGG A AL+K+GV+ GLG+YG++NSLYNV+GGHRAIVFNRI+GIKDKVY EGTH +IPWFERP+IYDVRARPHLVESTSGSRDLQMVKI LRVLTRP QL IYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVS+EIRKILTERA YFNI LDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKF+V+KAEQDKKSAVIRAQGEAKSAQLIGQAIA NPAFITLR+IEASR+I+ IANSAN+V+LNS DLL+NLQ Sbjct: 1 LNMSTVNIPNLPGGRAASALIKLGVVAGLGVYGLSNSLYNVEGGHRAIVFNRIVGIKDKVYPEGTHFVIPWFERPVIYDVRARPHLVESTSGSRDLQMVKISLRVLTRPVPDQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSREIRKILTERATYFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVDKAEQDKKSAVIRAQGEAKSAQLIGQAIANNPAFITLRRIEASRDISHVIANSANRVYLNSDDLLINLQ 280
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: M0TNP2_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 461.07 bits (1185), Expect = 1.366e-156 Identity = 237/289 (82.01%), Postives = 256/289 (88.58%), Query Frame = 2 Query: 56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922 M+ N+KVP +PG GA AL+K+ +IGG +Y NS+YNVDGGHRAIVFNRI GIKDKVY EGTHLMIPWFERPIIYDVRARP+LVESTSGSRDLQMVKIGLRVLTRP QL IYR+LGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILTERA FNI LDDVSITSL+FGKEFT AIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIA NPAF+ LR+IEA+REIA TIANS+N+VFL S DLLLNLQE++ E K Sbjct: 1 MSFRNVKVPNIPGSGASAALVKVALIGGTVVYAALNSIYNVDGGHRAIVFNRIEGIKDKVYPEGTHLMIPWFERPIIYDVRARPNLVESTSGSRDLQMVKIGLRVLTRPLPDQLPTIYRSLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERARNFNIALDDVSITSLSFGKEFTNAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIANNPAFLALRQIEAAREIAHTIANSSNRVFLQSNDLLLNLQELNFEGTTK 289
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_MOUSE (Prohibitin-2 OS=Mus musculus GN=Phb2 PE=1 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 2.198e-96 Identity = 139/246 (56.50%), Postives = 201/246 (81.71%), Query Frame = 2 Query: 164 SLYNVDGGHRAIVFNRILGIK-DKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQE 898 S++ V+GGHRAI FNRI G++ D + +EG H IPWF+ PIIYD+RARP + S +GS+DLQMV I LRVL+RP + +L +Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR VS IR+ LTERA F++ LDDV+IT L+F +E+TAA+EAKQVA QEA+RA+F+VEKA+Q+++ +++A+GEA++A+++G+A++KNP +I LRKI A++ I++TIA S N+++L + +L+LNLQ+ Sbjct: 39 SVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQD 284
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_HUMAN (Prohibitin-2 OS=Homo sapiens GN=PHB2 PE=1 SV=2) HSP 1 Score: 301.982 bits (772), Expect = 2.198e-96 Identity = 139/246 (56.50%), Postives = 201/246 (81.71%), Query Frame = 2 Query: 164 SLYNVDGGHRAIVFNRILGIK-DKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQE 898 S++ V+GGHRAI FNRI G++ D + +EG H IPWF+ PIIYD+RARP + S +GS+DLQMV I LRVL+RP + +L +Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR VS IR+ LTERA F++ LDDV+IT L+F +E+TAA+EAKQVA QEA+RA+F+VEKA+Q+++ +++A+GEA++A+++G+A++KNP +I LRKI A++ I++TIA S N+++L + +L+LNLQ+ Sbjct: 39 SVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQD 284
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_SCHPO (Prohibitin-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=phb2 PE=1 SV=2) HSP 1 Score: 301.212 bits (770), Expect = 3.256e-96 Identity = 144/242 (59.50%), Postives = 188/242 (77.69%), Query Frame = 2 Query: 164 SLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLN 889 SL+NVDGGHRAI ++RI GIK+ +Y EGTH +IPW E I YDVRA+P + S +G++DLQMV I RVL+RP L +IYRTLG +Y+ERVLPSI++E LK+VVAQ+NASQLITQRE VS+ +R+ L +RAA FNI LDDVS+T + F EFTAA+EAKQ+A Q+A+RA F V++A +K+ ++RAQGE ++AQLIG+AI P FI LRK+E +REIA ++ S NKV LN+ LLL+ Sbjct: 44 SLFNVDGGHRAIKYSRIGGIKNLIYPEGTHFLIPWIETAIDYDVRAKPRNISSLTGTKDLQMVNINCRVLSRPDVHALPKIYRTLGGDYDERVLPSIVNEVLKSVVAQFNASQLITQRERVSRLVRENLMKRAARFNILLDDVSLTHVQFSPEFTAAVEAKQIAQQDAQRATFYVDRARMEKQGFIVRAQGEGRAAQLIGEAIKNKPGFIELRKLETAREIANILSKSNNKVMLNASTLLLD 285
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_CHICK (Prohibitin-2 OS=Gallus gallus GN=PHB2 PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 2.666e-95 Identity = 140/246 (56.91%), Postives = 199/246 (80.89%), Query Frame = 2 Query: 164 SLYNVDGGHRAIVFNRILGIK-DKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQE 898 S++ V+GG RAI FNRI G++ D + +EG H IPWF+ PIIYD+RARP + S +GS+DLQMV I LRVLTRP + +L +Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR VS IR+ LTERA F++ LDDV+IT L+F +E+TAA+EAKQVA QEA+RA+F+VEKA+Q++K +++A+GEA +A+++G+A+++NP +I LRKI A++ I++TIA S N+V+L + +L+LNLQ+ Sbjct: 39 SVFIVEGGQRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLTRPNAAELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQKQKIVQAEGEATAAKMLGEALSRNPGYIKLRKIRAAQNISKTIAGSQNRVYLTADNLVLNLQD 284
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_PONAB (Prohibitin-2 OS=Pongo abelii GN=PHB2 PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 3.232e-95 Identity = 138/246 (56.10%), Postives = 200/246 (81.30%), Query Frame = 2 Query: 164 SLYNVDGGHRAIVFNRILGIK-DKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQE 898 S++ V+GGHRAI FNRI G++ D + +EG H IPWF+ PIIYD+RARP + S +GS+DLQMV I LRVL+RP + +L +Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR VS IR+ LTERA F++ LDDV+IT L+F +E+TAA+EAKQVA QEA+RA+F+VEKA+Q+++ +++A+GEA++A+++G+A++KNP +I LRKI A++ I++TIA S N+++ + +L+LNLQ+ Sbjct: 39 SVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYPTADNLVLNLQD 284
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB1_YEAST (Prohibitin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHB1 PE=1 SV=2) HSP 1 Score: 282.337 bits (721), Expect = 7.287e-89 Identity = 131/238 (55.04%), Postives = 191/238 (80.25%), Query Frame = 2 Query: 164 SLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAK-NPAFITLRKIEASREIAQTIANSANKVFLNSK 874 S+Y+V GG R ++F+RI G+K +V EGTH ++PW ++ IIYDVR +P + + +G++DLQMV + LRVL RP+ QL IY+ LG +Y+ERVLPSI +E LK++VAQ++A++LITQRE +S++IRK L+ RA F I+L+DVSIT +TFG EFT A+E KQ+A Q+AERAKF+VEKAEQ+++++VIRA+GEA+SA+ I +A+AK + +R++EAS++IAQT+ANS+N V+L S+ Sbjct: 28 SMYDVKGGSRGVIFDRINGVKQQVVGEGTHFLVPWLQKAIIYDVRTKPKSIATNTGTKDLQMVSLTLRVLHRPEVLQLPAIYQNLGLDYDERVLPSIGNEVLKSIVAQFDAAELITQREIISQKIRKELSTRANEFGIKLEDVSITHMTFGPEFTKAVEQKQIAQQDAERAKFLVEKAEQERQASVIRAEGEAESAEFISKALAKVGDGLLLIRRLEASKDIAQTLANSSNVVYLPSQ 265
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB_RAT (Prohibitin OS=Rattus norvegicus GN=Phb PE=1 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 4.980e-88 Identity = 136/246 (55.28%), Postives = 188/246 (76.42%), Query Frame = 2 Query: 161 NSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAK-NPAFITLRKIEASREIAQTIANSANKVFLNS-KDLLLNL 892 ++LYNVD GHRA++F+R G++D V EGTH +IPW ++PII+D R+RP V +GS+DLQ V I LR+L RP ++QL IY ++GE+Y+ERVLPSI E LK+VVA+++A +LITQRE VS+++ LTERAA F + LDDVS+T LTFGKEFT A+EAKQVA QEAERA+F+VEKAEQ KK+A+I A+G++K+A+LI ++A I LRK+EA+ +IA ++ S N +L + + +LL L Sbjct: 25 SALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIYTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQSVLLQL 270
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB_MOUSE (Prohibitin OS=Mus musculus GN=Phb PE=1 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 4.980e-88 Identity = 136/246 (55.28%), Postives = 188/246 (76.42%), Query Frame = 2 Query: 161 NSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAK-NPAFITLRKIEASREIAQTIANSANKVFLNS-KDLLLNL 892 ++LYNVD GHRA++F+R G++D V EGTH +IPW ++PII+D R+RP V +GS+DLQ V I LR+L RP ++QL IY ++GE+Y+ERVLPSI E LK+VVA+++A +LITQRE VS+++ LTERAA F + LDDVS+T LTFGKEFT A+EAKQVA QEAERA+F+VEKAEQ KK+A+I A+G++K+A+LI ++A I LRK+EA+ +IA ++ S N +L + + +LL L Sbjct: 25 SALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIYTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQSVLLQL 270
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB1_DICDI (Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA PE=3 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 6.298e-88 Identity = 132/245 (53.88%), Postives = 190/245 (77.55%), Query Frame = 2 Query: 161 NSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFL-NSKDLLLNL 892 +S+Y VDGG RA++F+RI G+K+K EGTH ++PW ++PII+D+R+ P ++S +GS+DLQ V + +RVL RP L I+ LG +Y+ER+LPS+ +E LK+VVAQY+A++LITQRE VSKEIR+ L +RA FN+ LDDVSIT L+F ++FT AIE KQVA QEAER+K+IV K EQ+KK+ +IRA+GEA++A+LIGQA+ + AFI LR+IEA ++I ++++ S ++ S +LL+NL Sbjct: 24 SSMYTVDGGQRAVIFDRISGVKEKSVGEGTHFIMPWLQKPIIFDIRSSPRNIKSDTGSKDLQTVSVTVRVLFRPDVEHLPSIFSKLGLDYDERILPSLGNEVLKSVVAQYDATELITQREVVSKEIRESLMKRAKEFNLLLDDVSITHLSFSQDFTNAIEHKQVAQQEAERSKYIVMKNEQEKKANIIRAEGEAEAAKLIGQAMGNSAAFIELRRIEAYKDITESLSKSKQVTYVPTSGNLLMNL 268
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB_CHICK (Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 9.969e-88 Identity = 136/246 (55.28%), Postives = 187/246 (76.02%), Query Frame = 2 Query: 161 NSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAK-NPAFITLRKIEASREIAQTIANSANKVFLNS-KDLLLNL 892 ++LYNVD GHRA++F+R G++D V EGTH +IPW ++PII+D R+RP + +GS+DLQ V I LR+L RP + QL I+ ++GE+Y+ERVLPSI E LK+VVA+++A +LITQRE VS+++ + LTERAA F + LDDVS+T LTFGKEFT A+E KQVA QEAERA+FIVEKAEQ KK+AVI A+G++K+A+LI ++A I LRK+EA+ +IA ++ S N +L S + +LL L Sbjct: 25 SALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPSGQSVLLQL 270 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0016658 ID=g.arboreum_cottongen_reftransV1_0016658; Name=g.arboreum_cottongen_reftransV1_0016658; organism=Gossypium arboreum; type=contig; length=1639bpback to top |