g.arboreum_cottongen_reftransV1_0016658, g.arboreum_cottongen_reftransV1_0016658 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0016658
Unique Nameg.arboreum_cottongen_reftransV1_0016658
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1639
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr13chromosomeg.arboreum_cottongen_reftransV1_0016658:1..1626 .
Chr13:22093549..22097556 -		n/a
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: V7BUW6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G099600g PE=4 SV=1)

HSP 1 Score: 473.396 bits (1217), Expect = 2.308e-161
Identity = 242/289 (83.74%), Postives = 266/289 (92.04%), Query Frame = 2 
Query:   56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922
            MN+ N+K+P +P GGA  ALLK+G+IGG+G+Y  ANSLYNV+GGHRAIVFNR++GIKD+VY EGTH +IPWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRP   QL  +YRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILTERAA F+I LDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKF+VEKAEQDKKSAVIRAQGEA+SAQLIGQAI KNPAFITLRKIEA+REIA TI+NSANK +LNS+DLLLNLQ+MDLE   K
Sbjct:    1 MNMKNMKIPNVPSGGAASALLKLGIIGGIGVYAAANSLYNVEGGHRAIVFNRLVGIKDEVYPEGTHFVIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPLPNQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAANFHIVLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKKSAVIRAQGEAQSAQLIGQAIQKNPAFITLRKIEAAREIAHTISNSANKAYLNSEDLLLNLQKMDLEPSKK 289
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: A5AHP2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005691 PE=4 SV=1)

HSP 1 Score: 471.47 bits (1212), Expect = 1.280e-160
Identity = 254/286 (88.81%), Postives = 269/286 (94.06%), Query Frame = 2 
Query:   56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLES 913
            MN NN+KVPK+PGGGA  AL+K+GV+GGLGLYG  NSLYNV+GGHRAIVFNRI+G+KDKVY EGTHLMIPWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRP   QL  IYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILTERAA FNI LDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKF+VEKAEQDKKSA+IRAQGEAKSAQLIGQAIA NPAFITLRKIEASREIA TI+NSAN+VFLNS DLLLNLQEM+LES
Sbjct:    1 MNFNNVKVPKVPGGGAASALIKLGVVGGLGLYGAINSLYNVEGGHRAIVFNRIIGVKDKVYPEGTHLMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPAIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAANFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKKSAIIRAQGEAKSAQLIGQAIANNPAFITLRKIEASREIAHTISNSANRVFLNSNDLLLNLQEMNLES 286
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: D7U851_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02350 PE=4 SV=1)

HSP 1 Score: 471.47 bits (1212), Expect = 1.742e-159
Identity = 254/286 (88.81%), Postives = 269/286 (94.06%), Query Frame = 2 
Query:   56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLES 913
            MN NN+KVPK+PGGGA  AL+K+GV+GGLGLYG  NSLYNV+GGHRAIVFNRI+G+KDKVY EGTHLMIPWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRP   QL  IYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILTERAA FNI LDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKF+VEKAEQDKKSA+IRAQGEAKSAQLIGQAIA NPAFITLRKIEASREIA TI+NSAN+VFLNS DLLLNLQEM+LES
Sbjct:   73 MNFNNVKVPKVPGGGAASALIKLGVVGGLGLYGAINSLYNVEGGHRAIVFNRIIGVKDKVYPEGTHLMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPAIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAANFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKKSAIIRAQGEAKSAQLIGQAIANNPAFITLRKIEASREIAHTISNSANRVFLNSNDLLLNLQEMNLES 358
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: Q38M64_SOLTU (Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 468.389 bits (1204), Expect = 2.148e-159
Identity = 245/293 (83.62%), Postives = 266/293 (90.78%), Query Frame = 2 
Query:   56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLL-------NLQEMDLES 913
            MNLN++KVPKMPGGGA  AL+K GVI GLG+YGVANSLYNV+GGHRAIVFNRI G+K+KVY EGTH MIPWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRP S QL  +YR+LGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVS+EIRKILTERAA FNI LDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKF+VEKAEQDK+SAVIRAQGEAKSAQLIGQAIA NPAFITLRKIEA+REIAQTI+++ANKV+L++    L        LQE DL+S
Sbjct:    1 MNLNSVKVPKMPGGGATSALIKFGVIAGLGVYGVANSLYNVEGGHRAIVFNRIGGVKNKVYPEGTHFMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVSDQLPTVYRSLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSREIRKILTERAANFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREIAQTISHAANKVYLSAMICCLTFRTSTWTLQESDLDS 293
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: Q45Q23_NICBE (PHB2 OS=Nicotiana benthamiana PE=2 SV=1)

HSP 1 Score: 464.151 bits (1193), Expect = 1.091e-157
Identity = 236/269 (87.73%), Postives = 256/269 (95.17%), Query Frame = 2 
Query:   56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVF 862
            MNLNN+KVPKMPGGGA  AL+K+GV+ GLG+YGVANSLYNVDGGHRAIVFNRI+G+KDKVY EGTH MIPWFERP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRP   QL  +YRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVS+EIRKILTERAA FNI LDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKF+VEKAEQDK+SA+IRAQGEAKSAQLIGQ+IA NPAFITLRKIEA+REIAQT++++ANKV+
Sbjct:    1 MNLNNVKVPKMPGGGAASALIKLGVVAGLGVYGVANSLYNVDGGHRAIVFNRIIGVKDKVYPEGTHFMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSREIRKILTERAANFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAIIRAQGEAKSAQLIGQSIANNPAFITLRKIEAAREIAQTMSHAANKVY 269
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: A0A0D3A3R8_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 463.381 bits (1191), Expect = 1.648e-157
Identity = 249/289 (86.16%), Postives = 274/289 (94.81%), Query Frame = 2 
Query:   56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922
            MNLNN+KVPK+PGGGA+ ALLKIG+IGGLGLYG  +SLYNVDGGHRAI+FNR++G+KDKVY EGTHLM+PWFERP+IYDVRARP+LVESTSGSRDLQMVKIGLRVLTRP + QL EIYRTLGENY+ERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILT+RA  FNI LDDVSIT+LTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDK+SAVIRAQGEAKSAQLIGQAIA N AFITLRKIEA+REIAQTIA+SANKV+L+S DLLLNLQEM+L+ +PK
Sbjct:    1 MNLNNVKVPKVPGGGAVSALLKIGIIGGLGLYGATHSLYNVDGGHRAIMFNRLVGVKDKVYPEGTHLMVPWFERPVIYDVRARPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEIYRTLGENYSERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTQRATNFNIALDDVSITTLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNQAFITLRKIEAAREIAQTIAHSANKVYLSSDDLLLNLQEMNLDVNPK 289
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: M4D3I1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra011035 PE=4 SV=1)

HSP 1 Score: 463.381 bits (1191), Expect = 1.648e-157
Identity = 249/289 (86.16%), Postives = 274/289 (94.81%), Query Frame = 2 
Query:   56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922
            MNLNN+KVPK+PGGGA+ ALLKIG+IGGLGLYG  +SLYNVDGGHRAI+FNR++G+KDKVY EGTHLM+PWFERP+IYDVRARP+LVESTSGSRDLQMVKIGLRVLTRP + QL EIYRTLGENY+ERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILT+RA  FNI LDDVSIT+LTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDK+SAVIRAQGEAKSAQLIGQAIA N AFITLRKIEA+REIAQTIA+SANKV+L+S DLLLNLQEM+L+ +PK
Sbjct:    1 MNLNNVKVPKVPGGGAVSALLKIGIIGGLGLYGATHSLYNVDGGHRAIMFNRLVGVKDKVYPEGTHLMVPWFERPVIYDVRARPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEIYRTLGENYSERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTQRATNFNIALDDVSITTLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNQAFITLRKIEAAREIAQTIAHSANKVYLSSDDLLLNLQEMNLDVNPK 289
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: Q9AXM0_BRANA (BnaA01g08360D protein OS=Brassica napus GN=BnaC01g09910D PE=4 SV=1)

HSP 1 Score: 463.381 bits (1191), Expect = 1.648e-157
Identity = 249/289 (86.16%), Postives = 274/289 (94.81%), Query Frame = 2 
Query:   56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922
            MNLNN+KVPK+PGGGA+ ALLKIG+IGGLGLYG  +SLYNVDGGHRAI+FNR++G+KDKVY EGTHLM+PWFERP+IYDVRARP+LVESTSGSRDLQMVKIGLRVLTRP + QL EIYRTLGENY+ERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILT+RA  FNI LDDVSIT+LTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDK+SAVIRAQGEAKSAQLIGQAIA N AFITLRKIEA+REIAQTIA+SANKV+L+S DLLLNLQEM+L+ +PK
Sbjct:    1 MNLNNVKVPKVPGGGAVSALLKIGIIGGLGLYGATHSLYNVDGGHRAIMFNRLVGVKDKVYPEGTHLMVPWFERPVIYDVRARPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEIYRTLGENYSERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTQRATNFNIALDDVSITTLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNQAFITLRKIEAAREIAQTIAHSANKVYLSSDDLLLNLQEMNLDVNPK 289
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: A0A067JJB9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25723 PE=4 SV=1)

HSP 1 Score: 463.381 bits (1191), Expect = 1.740e-157
Identity = 249/289 (86.16%), Postives = 268/289 (92.73%), Query Frame = 2 
Query:   56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922
            MN NN+KVPK+PGGGA  ALLK+GVIGGLGLY  ANSLYNV+GGHRAIVFNRI+G+KDKVY EGTHLMIPWFERP+IYDVR RPHLVESTSGSRDLQMVKIGLRVLTRP   QL  IYR LGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILTERAAYFNI+LDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSA+IRA+GEAKSAQLIGQAIA NPAFITLRKIEASREIA TI+ +ANKV+L++ DLLLNLQ+M+L+   K
Sbjct:    1 MNFNNVKVPKVPGGGAASALLKLGVIGGLGLYAAANSLYNVEGGHRAIVFNRIIGVKDKVYPEGTHLMIPWFERPVIYDVRTRPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTIYRNLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERAAYFNIELDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAIIRAEGEAKSAQLIGQAIANNPAFITLRKIEASREIAHTISAAANKVYLDADDLLLNLQKMELDVQGK 289
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Match: A0A0C9S1S5_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_22732_1481 transcribed RNA sequence OS=Wollemia nobilis PE=4 SV=1)

HSP 1 Score: 463.766 bits (1192), Expect = 1.748e-157
Identity = 238/285 (83.51%), Postives = 259/285 (90.88%), Query Frame = 2 
Query:   56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLE 910
            MN N +KVPKMPGGG   AL K  VIGGLG+Y   NSLYNV+GGHRAIVFNRI+G+KD+VY EGTHLMIPWF+RP+IYDVRARPHLVESTSGSRDLQMVKIGLRVLTRP   QL  IYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIR+ILTERAA FNI LDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKF+VEKAEQDK+SA+IRAQGEAKSAQLIG+AI+ NPAFITLR+IEASREIA TI+NS N+VFL+S  LLLNLQ++ LE
Sbjct:    1 MNFN-VKVPKMPGGGPAAALTKAAVIGGLGIYAAFNSLYNVEGGHRAIVFNRIVGVKDRVYPEGTHLMIPWFDRPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPLPDQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRRILTERAANFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAIIRAQGEAKSAQLIGEAISNNPAFITLRRIEASREIAHTISNSTNRVFLSSDALLLNLQDIVLE 284
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB1_ARATH (Prohibitin-1, mitochondrial OS=Arabidopsis thaliana GN=PHB1 PE=1 SV=1)

HSP 1 Score: 449.514 bits (1155), Expect = 5.185e-154
Identity = 243/287 (84.67%), Postives = 269/287 (93.73%), Query Frame = 2 
Query:   62 LNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922
            +NN+KVPK+PGGGA+  LLK+G+IGGLGLYG  +SLYNV+GGHRAI+FNR++GIKDKVY EGTHLMIPWFERP+IYDVRARP+LVESTSGSRDLQMVKIGLRVLTRP + QL EIYR+LGENY+ERVLPSII+ETLKAVVAQYNASQLITQRE VS+EIRKILTERAA FN+ LDDVSIT+LTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDK+SAVIRAQGEAKSAQLIGQAIA N AFITLRKIEA+REIAQTIANSANKV+L+S DLLLNLQ M+L+   K
Sbjct:    1 MNNVKVPKIPGGGAISTLLKVGIIGGLGLYGATHSLYNVEGGHRAIMFNRLVGIKDKVYPEGTHLMIPWFERPVIYDVRARPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEIYRSLGENYSERVLPSIINETLKAVVAQYNASQLITQREAVSREIRKILTERAANFNVALDDVSITNLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNQAFITLRKIEAAREIAQTIANSANKVYLSSDDLLLNLQGMNLDVDAK 287
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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB6_ARATH (Prohibitin-6, mitochondrial OS=Arabidopsis thaliana GN=PHB6 PE=1 SV=1)

HSP 1 Score: 441.81 bits (1135), Expect = 4.522e-151
Identity = 230/289 (79.58%), Postives = 255/289 (88.24%), Query Frame = 2 
Query:   56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922
            MN  N+KVPK PGGG + A++  G+          ++LYNVDGGHRAIVFNR++GIKDKVY EGTHLMIPWFERPIIYDVRA+P+LVESTSGSRDLQMVKIGLRVLTRP + QL E+YR+LGENY ERVLPSIIHETLKAVVAQYNASQLITQRE+VS+EIRKILT RAA F+I LDDVSIT LTFGKEFTAAIE KQVAAQEAERAKFIVEKAEQDK+SAVIRA+GEAKSAQLIGQAIA N AF+TLRKIEA+REIAQTI+ SANKV+L+S DLLLNLQ MDL+  PK
Sbjct:    1 MNFKNVKVPKGPGGGVIAAVVIGGLSLYGA----THTLYNVDGGHRAIVFNRLVGIKDKVYPEGTHLMIPWFERPIIYDVRAKPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEVYRSLGENYRERVLPSIIHETLKAVVAQYNASQLITQRESVSREIRKILTLRAANFHIALDDVSITGLTFGKEFTAAIEGKQVAAQEAERAKFIVEKAEQDKRSAVIRAEGEAKSAQLIGQAIANNQAFLTLRKIEAAREIAQTISRSANKVYLSSNDLLLNLQAMDLDVKPK 285
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_ARATH (Prohibitin-2, mitochondrial OS=Arabidopsis thaliana GN=PHB2 PE=1 SV=1)

HSP 1 Score: 432.565 bits (1111), Expect = 2.321e-147
Identity = 235/285 (82.46%), Postives = 260/285 (91.23%), Query Frame = 2 
Query:   56 MNLNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLE 910
            M+ N  KVP +PG  AL ALLK+ VIGGLG+Y + NSLYNVDGGHRA++FNR+ GIK+KVY EGTH M+PWFERPIIYDVRARP+LVEST+GS DLQMVKIGLRVLTRP   +L +IYRTLGENY+ERVLPSIIHETLKAVVAQYNASQLITQRE VS+EIRKILTERA+ F+I LDDVSIT+LTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQD++SAVIRAQGEAKSAQLIGQAIA N AFITLRKIEA+REIAQTIA SANKV+L+S DLLLNLQEM+LE
Sbjct:    1 MSFN--KVPNIPGAPALSALLKVSVIGGLGVYALTNSLYNVDGGHRAVMFNRLTGIKEKVYPEGTHFMVPWFERPIIYDVRARPYLVESTTGSHDLQMVKIGLRVLTRPMGDRLPQIYRTLGENYSERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERASNFDIALDDVSITTLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDRRSAVIRAQGEAKSAQLIGQAIANNQAFITLRKIEAAREIAQTIAQSANKVYLSSNDLLLNLQEMNLE 283
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB7_ARATH (Prohibitin-7, mitochondrial OS=Arabidopsis thaliana GN=PHB7 PE=1 SV=1)

HSP 1 Score: 403.29 bits (1035), Expect = 4.188e-136
Identity = 218/278 (78.42%), Postives = 240/278 (86.33%), Query Frame = 2 
Query:   62 LNNLKVPKMPGGGALPAXXXXXXXXXXXXXXXANSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQ 895
            +N  KVP +PG  AL ALLK+GVIGGLGLY + +S+YNVDGGHRAIVFNR  GIKD+VY EGTH  IP FER IIYDVR+RP++  S +GS DLQ V IGLRVLTRP   +L EIYRTLG+NY ERVLPSII+ETLKAVVAQYNAS LITQRE VS+EIRKI+TERAA FNI LDDVSIT+L FGKEFT AIE KQVAAQEAERAKFIVEKAEQDKKSA+IRAQGEAKSAQLIGQAIA N AFITLRKIEA+REIAQTIA SANKV+LNS DLL++ Q
Sbjct:    1 MNVKKVPNVPGSPALSALLKLGVIGGLGLYCIGSSMYNVDGGHRAIVFNRFTGIKDRVYPEGTHFKIPLFERAIIYDVRSRPYVENSQTGSNDLQTVTIGLRVLTRPMGDRLPEIYRTLGQNYGERVLPSIINETLKAVVAQYNASHLITQREAVSREIRKIVTERAAKFNIALDDVSITNLKFGKEFTEAIEKKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAQLIGQAIANNEAFITLRKIEAAREIAQTIAKSANKVYLNSSDLLISKQ 278
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_DICDI (Prohibitin-2 OS=Dictyostelium discoideum GN=phbB PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 1.502e-106
Identity = 156/253 (61.66%), Postives = 207/253 (81.82%), Query Frame = 2 
Query:  164 SLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMDLESHPK 922
            SL NV+GGHRAIVFNR +GIK+KVY+EGTH ++PWFER  IYDVRA+P  + S +GS+DLQMV I +RVL++PK +QL  IYRTLG++Y+ERVLPSI++E LK++VAQ+NASQLITQRE VS+ I K L +RA  FNI+LDDVSIT L FG+E+ AAIEAKQVA QEAERA+F+VEKA QDK+S +++A+GEA+SAQLI  AI ++P  + LR +EAS+EIA  ++ S NK++++++ LLLN  +++    PK
Sbjct:   40 SLVNVEGGHRAIVFNRFVGIKNKVYNEGTHFIVPWFERAEIYDVRAKPRSISSLTGSKDLQMVNITIRVLSKPKVSQLPAIYRTLGKDYDERVLPSIVNEILKSIVAQFNASQLITQREQVSRLIFKRLVDRAKDFNIELDDVSITHLNFGREYAAAIEAKQVAQQEAERARFLVEKALQDKRSIIVKAEGEAQSAQLINDAIKQSPYLVQLRTLEASKEIAHILSKSPNKLYISNETLLLNGFDLNNNQQPK 292
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_YEAST (Prohibitin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHB2 PE=1 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 4.676e-100
Identity = 145/243 (59.67%), Postives = 198/243 (81.48%), Query Frame = 2 
Query:  161 NSLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLN 889
            N+L+NVDGGHRAIV++RI G+  ++++EGTH + PW + PIIYDVRA+P  V S +G++DLQMV I  RVL+RP   QL  IYRTLG++Y+ERVLPSI++E LKAVVAQ+NASQLITQRE VS+ IR+ L  RA+ FNI LDDVSIT +TF  EFT A+EAKQ+A Q+A+RA F+V+KA Q+K+  V+RAQGEAKSA+LIG+AI K+  ++ L++++ +R+IA+ +A+S N+V L+++ LLLN
Sbjct:   56 NALFNVDGGHRAIVYSRIHGVSSRIFNEGTHFIFPWLDTPIIYDVRAKPRNVASLTGTKDLQMVNITCRVLSRPDVVQLPTIYRTLGQDYDERVLPSIVNEVLKAVVAQFNASQLITQREKVSRLIRENLVRRASKFNILLDDVSITYMTFSPEFTNAVEAKQIAQQDAQRAAFVVDKARQEKQGMVVRAQGEAKSAELIGEAIKKSRDYVELKRLDTARDIAKILASSPNRVILDNEALLLN 298
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_XENTR (Prohibitin-2 OS=Xenopus tropicalis GN=phb2 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 1.477e-97
Identity = 142/246 (57.72%), Postives = 201/246 (81.71%), Query Frame = 2 
Query:  164 SLYNVDGGHRAIVFNRILGIK-DKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQE 898
            S++ V+GGHRAI FNRI G++ D + +EG H   PWF+ PIIYD+RARP  + S +GS+DLQMV I LRVL+RP +++L  +Y+ LG +Y+ERVLPSI++E LK+VVA++NASQLITQR  VS  IR+ LTERA  F+I LDDV+IT L+F +E+TAA+E+KQVA QEA+RA+F+VEKA+QD+K  +++A+GEA +A++IG A++KNP ++ LR+I A++ IA+TIA+S N+V+LN+  L+LNLQ+
Sbjct:   39 SVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRFPWFQYPIIYDIRARPRKISSPTGSKDLQMVNITLRVLSRPLASELPFMYQRLGLDYDERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSIILDDVAITELSFSREYTAAVESKQVAQQEAQRAQFLVEKAKQDQKQKIVQAEGEAAAAKMIGDALSKNPGYLKLRRIRAAQSIAKTIASSQNRVYLNADSLVLNLQD 284
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_CAEEL (Mitochondrial prohibitin complex protein 2 OS=Caenorhabditis elegans GN=phb-2 PE=1 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 9.314e-97
Identity = 140/247 (56.68%), Postives = 191/247 (77.33%), Query Frame = 2 
Query:  164 SLYNVDGGHRAIVFNRILGIKDKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQEMD 904
            S++ V+ GHRAI+FNRI G+   +Y EG H  IPWF+ PIIYD+RARP+ + S +GS+DLQMV IGLRVL+RP    L  IYRTLG+N+ ERVLPSI +E LK VVA++NASQLITQR+ VS  +RK L ERA  FNI LDDVS+T L F  +++AA+EAKQVAAQEA+RA F VE+A+Q K+  +++A+GEA+SA+L+G+A+  +P F+ LRKI A+++IA+ ++ S NK +L +  L+LN+ + D
Sbjct:   39 SMFTVEAGHRAIMFNRIGGLSTDLYKEGLHFRIPWFQYPIIYDIRARPNQIRSPTGSKDLQMVNIGLRVLSRPNPEHLVHIYRTLGQNWEERVLPSICNEVLKGVVAKFNASQLITQRQQVSMLVRKTLIERALDFNIILDDVSLTELAFSPQYSAAVEAKQVAAQEAQRATFYVERAKQQKQEKIVQAEGEAESAKLLGEAMKNDPGFLKLRKIRAAQKIARIVSESGNKTYLPTGGLMLNIADTD 285
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_RAT (Prohibitin-2 OS=Rattus norvegicus GN=Phb2 PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.974e-96
Identity = 139/246 (56.50%), Postives = 201/246 (81.71%), Query Frame = 2 
Query:  164 SLYNVDGGHRAIVFNRILGIK-DKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQE 898
            S++ V+GGHRAI FNRI G++ D + +EG H  IPWF+ PIIYD+RARP  + S +GS+DLQMV I LRVL+RP + +L  +Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR  VS  IR+ LTERA  F++ LDDV+IT L+F +E+TAA+EAKQVA QEA+RA+F+VEKA+Q+++  +++A+GEA++A+++G+A++KNP +I LRKI A++ I++TIA S N+++L + +L+LNLQ+
Sbjct:   39 SVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQD 284
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Match: PHB2_BOVIN (Prohibitin-2 OS=Bos taurus GN=PHB2 PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.151e-96
Identity = 139/246 (56.50%), Postives = 201/246 (81.71%), Query Frame = 2 
Query:  164 SLYNVDGGHRAIVFNRILGIK-DKVYSEGTHLMIPWFERPIIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPKSTQLTEIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSKEIRKILTERAAYFNIQLDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKKSAVIRAQGEAKSAQLIGQAIAKNPAFITLRKIEASREIAQTIANSANKVFLNSKDLLLNLQE 898
            S++ V+GGHRAI FNRI G++ D + +EG H  IPWF+ PIIYD+RARP  + S +GS+DLQMV I LRVL+RP + +L  +Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR  VS  IR+ LTERA  F++ LDDV+IT L+F +E+TAA+EAKQVA QEA+RA+F+VEKA+Q+++  +++A+GEA++A+++G+A++KNP +I LRKI A++ I++TIA S N+++L + +L+LNLQ+
Sbjct:   39 SVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAMELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAARMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQD 284
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V7BUW6_PHAVU2.308e-16183.74Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A5AHP2_VITVI1.280e-16088.81Putative uncharacterized protein OS=Vitis vinifera... [more]
D7U851_VITVI1.742e-15988.81Putative uncharacterized protein OS=Vitis vinifera... [more]
Q38M64_SOLTU2.148e-15983.62Putative uncharacterized protein OS=Solanum tubero... [more]
Q45Q23_NICBE1.091e-15787.73PHB2 OS=Nicotiana benthamiana PE=2 SV=1[more]
A0A0D3A3R8_BRAOL1.648e-15786.16Uncharacterized protein OS=Brassica oleracea var. ... [more]
M4D3I1_BRARP1.648e-15786.16Uncharacterized protein OS=Brassica rapa subsp. pe... [more]
Q9AXM0_BRANA1.648e-15786.16BnaA01g08360D protein OS=Brassica napus GN=BnaC01g... [more]
A0A067JJB9_JATCU1.740e-15786.16Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A0C9S1S5_9SPER1.748e-15783.51TSA: Wollemia nobilis Ref_Wollemi_Transcript_22732... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0016658 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
PHB1_ARATH5.185e-15484.67Prohibitin-1, mitochondrial OS=Arabidopsis thalian... [more]
PHB6_ARATH4.522e-15179.58Prohibitin-6, mitochondrial OS=Arabidopsis thalian... [more]
PHB2_ARATH2.321e-14782.46Prohibitin-2, mitochondrial OS=Arabidopsis thalian... [more]
PHB7_ARATH4.188e-13678.42Prohibitin-7, mitochondrial OS=Arabidopsis thalian... [more]
PHB2_DICDI1.502e-10661.66Prohibitin-2 OS=Dictyostelium discoideum GN=phbB P... [more]
PHB2_YEAST4.676e-10059.67Prohibitin-2 OS=Saccharomyces cerevisiae (strain A... [more]
PHB2_XENTR1.477e-9757.72Prohibitin-2 OS=Xenopus tropicalis GN=phb2 PE=2 SV... [more]
PHB2_CAEEL9.314e-9756.68Mitochondrial prohibitin complex protein 2 OS=Caen... [more]
PHB2_RAT1.974e-9656.50Prohibitin-2 OS=Rattus norvegicus GN=Phb2 PE=1 SV=... [more]
PHB2_BOVIN2.151e-9656.50Prohibitin-2 OS=Bos taurus GN=PHB2 PE=2 SV=1[more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000163ProhibitinPRINTSPR00679PROHIBITINcoord: 219..235
score: 52.94
coord: 148..164
score: 60.63
coord: 171..190
score: 61.92
coord: 84..100
score: 55.2
coord: 102..121
score: 53.85
coord: 196..219
score: 75.0
coord: 125..143
score: 66.8
IPR000163ProhibitinPANTHERPTHR23222PROHIBITINcoord: 4..292
IPR001107Band 7 domainSMARTSM00244PHB_4coord: 40..201
e-value: 1.8E-44
score: 163.7
IPR001107Band 7 domainPFAMPF01145Band_7coord: 43..218
e-value: 9.7E-25
score: 87.4
IPR001107Band 7 domainSUPERFAMILY117892Band 7/SPFH domaincoord: 72..208
NoneNo IPR availablePANTHERPTHR23222:SF1PROHIBITIN-2coord: 4..292

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0016658 ID=g.arboreum_cottongen_reftransV1_0016658; Name=g.arboreum_cottongen_reftransV1_0016658; organism=Gossypium arboreum; type=contig; length=1639bp
CCGGAATCCCTCTATTCCTCTCATCAAAGGTTGCCATTTTGTAGCATTGA
GTAAAATGAATCTCAACAACCTCAAAGTTCCTAAGATGCCTGGAGGCGGA
GCACTTCCTGCTTTGCTTAAGATTGGAGTCATTGGTGGGCTTGGCCTCTA
TGGAGTTGCCAATAGTCTCTACAACGTTGACGGAGGGCACCGAGCAATTG
TTTTCAATCGGATTTTGGGCATCAAAGATAAGGTTTATTCCGAGGGGACA
CACCTTATGATACCATGGTTTGAGAGGCCTATCATCTATGATGTTCGTGC
AAGACCTCATTTAGTTGAGAGTACTTCCGGTAGTCGTGATCTCCAGATGG
TCAAGATTGGGCTTCGTGTTCTCACTCGCCCCAAGTCAACTCAGTTAACT
GAAATTTATCGAACCCTTGGTGAGAACTATAATGAGAGGGTCCTGCCTTC
AATCATTCATGAAACTTTAAAAGCTGTTGTTGCTCAATACAATGCTAGCC
AACTCATTACACAGAGAGAGAATGTCAGTAAGGAAATCCGGAAGATTCTG
ACTGAAAGGGCAGCTTACTTCAACATTCAACTTGATGATGTGTCCATTAC
AAGTCTGACTTTTGGGAAGGAATTCACTGCTGCAATTGAGGCGAAACAGG
TGGCTGCACAAGAAGCCGAGAGAGCTAAATTTATTGTGGAAAAAGCTGAA
CAGGACAAGAAAAGTGCTGTTATCCGAGCACAGGGAGAAGCCAAGAGTGC
CCAACTCATTGGTCAAGCAATTGCAAAGAACCCAGCATTCATTACATTGA
GGAAAATTGAAGCCTCTAGAGAGATTGCGCAGACCATTGCAAATTCAGCC
AACAAAGTCTTCTTGAACTCAAAGGATCTGTTGCTGAACCTTCAGGAGAT
GGATCTTGAATCCCACCCAAAGTAAAATGGTTACCTTTATTTCACACTTG
GTTCAATAACTCCATTGTGAGAACGTTAAATACAAACTTGAAGGCTTTGC
TGTCGTCATGGATTTTTGAAGGATTTATTGTCTTAAAGGATCAGTGTCCA
AACATCATATCAGTTGATCCATATGGGGCTGTTTATTTGAGGTAGAGAAG
GGCTATTGGATATATGATAGTGGTCAATTCTATCTTTTATTCAAATTAAT
ACCTTACCCAATGGAACTAATGGACCTGTTGGATGTGGATTTATGTAACT
TTTGGATTAAGGTCAAGGTCGAGTTGTGGAATGATAGGAATCCCATGGTG
TTTCGGCTTTGTCTTATGTAATTTGCTTCAACTATTTGACCCTGCCAAAT
AAACCTGAAACGGCATCAGATAGTTTGATCCGGTTTATGGTTTGGTTGGC
CACCCCTAGCCTAGACCTGTACTCCATTGTTTGTTCTTGTTAAACTAGTT
TGAATTGCTTCAACTAAAATTATCACCCGAAATATCTGGTTAAGGTTACC
AGAATAGTGTGGTATTACGAGTTATGCTGGTTGTGGCTACCAATGTCAAC
TCCTGGGTGGCTTGCAAGTTGTACGGTGTTATTGACACCCGGAGTGAAGT
CCCACAATTTGTTTTAAGATTAATTTGGATATTGTGTGATTAGTTGTAAT
TTCAAGTTTTTTGTGGTATTGTTGAATTTCTTATTTTAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000163Prohibitin
IPR001107Band_7
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane