g.arboreum_cottongen_reftransV1_0020566, g.arboreum_cottongen_reftransV1_0020566 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy TrEMBL
Match: A0A0B0N3L3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_34425 PE=4 SV=1) HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0 Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 1 Query: 70 MATNGTSDIKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPGDSKACYGGLNELNTDLAKKSVLLGNGFTPSEADXXXXXXXXXXXXALSTPEKEKLPHVMRWMDYIQNSEDLGAHFEKILLEKPVFEPQMAKAAAKPEVTSSAKGTVQNTKIADKPDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 1245 MATNGTSDIKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPGDSKACYGGLNELNTDLAKKSVLLGNGFTPSEADVIVFSVIHSSVIALSTPEKEKLPHVMRWMDYIQNSEDLGAHFEKILLEKPVFEPQMAKAAAKPEVTSSAKGTVQNTKIADKPDAEKNAKKSDSVDAKKKAKGDKEAVPEKKAPEKEASDKDKELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK Sbjct: 1 MATNGTSDIKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPGDSKACYGGLNELNTDLAKKSVLLGNGFTPSEADVIVFSVIHSSVIALSTPEKEKLPHVMRWMDYIQNSEDLGAHFEKILLEKPVFEPQMAKAAAKPEVTSSAKGTVQNTKIADKPDAEKNAKKSDSVDAKKKAKGDKEAVPEKKAPEKEASDKDKELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 392
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy TrEMBL
Match: A0A0D2UW45_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G209900 PE=4 SV=1) HSP 1 Score: 662.914 bits (1709), Expect = 0.000e+0 Identity = 383/392 (97.70%), Postives = 387/392 (98.72%), Query Frame = 1 Query: 70 MATNGTSDIKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPGDSKACYGGLNELNTDLAKKSVLLGNGFTPSEADXXXXXXXXXXXXALSTPEKEKLPHVMRWMDYIQNSEDLGAHFEKILLEKPVFEPQMAKAAAKPEVTSSAKGTVQNTKIADKPDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 1245 MATNGTSD+KRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFP DSKAC+GGLNELNTDLAKKSVLLGNGFTPSEADVIVFSVIHSS+IALSTPEKEKLPHVMRWMDYIQNSEDLGA FEKILLEKPVFEPQ+AKAAAKPEVTSSAKGTVQNTKIADKPD EKNAKKSDS DAKKKAKGDKEAVPEKKAPEKEASDKDKELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGE ISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK Sbjct: 1 MATNGTSDLKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPSDSKACHGGLNELNTDLAKKSVLLGNGFTPSEADVIVFSVIHSSMIALSTPEKEKLPHVMRWMDYIQNSEDLGALFEKILLEKPVFEPQIAKAAAKPEVTSSAKGTVQNTKIADKPDTEKNAKKSDSADAKKKAKGDKEAVPEKKAPEKEASDKDKELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGECISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 392
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy TrEMBL
Match: A0A0D2RQS7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G209900 PE=4 SV=1) HSP 1 Score: 658.677 bits (1698), Expect = 0.000e+0 Identity = 374/392 (95.41%), Postives = 380/392 (96.94%), Query Frame = 1 Query: 70 MATNGTSDIKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPGDSKACYGGLNELNTDLAKKSVLLGNGFTPSEADXXXXXXXXXXXXALSTPEKEKLPHVMRWMDYIQNSEDLGAHFEKILLEKPVFEPQMAKAAAKPEVTSSAKGTVQNTKIADKPDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 1245 MATNGTSD+KRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFP DSKAC+GGLNELNTDLAKKSVLLGNGFTPSEADVIVFSVIHSS+IALSTPEKEKLPHVMRWMDYIQNSEDLGA FEKILLEKPVFEPQ+AKAAAKPEVTSSAKGTVQNTKIADKPD E K + D+ KKAKGDKEAVPEKKAPEKEASDKDKELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGE ISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK Sbjct: 1 MATNGTSDLKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPSDSKACHGGLNELNTDLAKKSVLLGNGFTPSEADVIVFSVIHSSMIALSTPEKEKLPHVMRWMDYIQNSEDLGALFEKILLEKPVFEPQIAKAAAKPEVTSSAKGTVQNTKIADKPDTE---KNAKKSDSAKKAKGDKEAVPEKKAPEKEASDKDKELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGECISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 389
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy TrEMBL
Match: A0A0D2UWF8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G209900 PE=4 SV=1) HSP 1 Score: 595.119 bits (1533), Expect = 0.000e+0 Identity = 350/361 (96.95%), Postives = 354/361 (98.06%), Query Frame = 1 Query: 70 MATNGTSDIKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPGDSKACYGGLNELNTDLAKKSVLLGNGFTPSEADXXXXXXXXXXXXALSTPEKEKLPHVMRWMDYIQNSEDLGAHFEKILLEKPVFEPQMAKAAAKPEVTSSAKGTVQNTKIADKPDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLF 1152 MATNGTSD+KRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFP DSKAC+GGLNELNTDLAKKSVLLGNGFTPSEADVIVFSVIHSS+IALSTPEKEKLPHVMRWMDYIQNSEDLGA FEKILLEKPVFEPQ+AKAAAKPEVTSSAKGTVQNTKIADKPD EKNAKKSDS DAKKKAKGDKEAVPEKKAPEKEASDKDKELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGE ISFSGIDGKPEDVLNPKKKQLEKITP F Sbjct: 1 MATNGTSDLKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPSDSKACHGGLNELNTDLAKKSVLLGNGFTPSEADVIVFSVIHSSMIALSTPEKEKLPHVMRWMDYIQNSEDLGALFEKILLEKPVFEPQIAKAAAKPEVTSSAKGTVQNTKIADKPDTEKNAKKSDSADAKKKAKGDKEAVPEKKAPEKEASDKDKELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGECISFSGIDGKPEDVLNPKKKQLEKITPVCF 361
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy TrEMBL
Match: A0A061FTH7_THECC (OB-fold nucleic acid binding domain-containing protein isoform 3 OS=Theobroma cacao GN=TCM_045490 PE=4 SV=1) HSP 1 Score: 586.645 bits (1511), Expect = 0.000e+0 Identity = 320/392 (81.63%), Postives = 345/392 (88.01%), Query Frame = 1 Query: 70 MATNGTSDIKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPGDSKACYGGLNELNTDLAKKSVLLGNGFTPSEADXXXXXXXXXXXXALSTPEKEKLPHVMRWMDYIQNSEDLGAHFEKILLEKPVFEPQMAKAAAKPEVTSSAKGTVQNTKIADKPDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 1245 MAT+G +D KR+Q IVSS+CKHFSLDPKAFSS+VPGNDIK LY+NILKSSGKESP+NNDEVMKWIAFA+SFP DSKAC+G LNELN DLA+KSVLLGNGFTPSEADVIVFS +H+SVI LS EK+KLPHVMRWMDYIQ+ EDLGA F+KILLEKP FEPQ AKAAAKPE+ +AK TVQ+TKIADK AE NAKKSDS K K + + E DK+ LSVSLLNIQVGLI KAWKHPSADSLLVEEIDVGEAK+RQVVSGLAKYCSPE LTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHT VEPLLPPEGAKPGE +SFSGIDGKP+DVLNPKKKQLEKITP+LFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK Sbjct: 1 MATSGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPGNDIKNLYLNILKSSGKESPKNNDEVMKWIAFAESFPKDSKACHGVLNELNADLAQKSVLLGNGFTPSEADVIVFSAVHNSVIGLSNSEKDKLPHVMRWMDYIQSKEDLGALFQKILLEKPGFEPQRAKAAAKPEIDLNAKKTVQSTKIADKSVAEVNAKKSDSGKKAKGDKEAVQEKKKAPETEASDKDKE--LSVSLLNIQVGLICKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCSPEQLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTAVEPLLPPEGAKPGEHVSFSGIDGKPDDVLNPKKKQLEKITPHLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 390
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy TrEMBL
Match: A0A061FRZ3_THECC (OB-fold nucleic acid binding domain-containing protein isoform 1 OS=Theobroma cacao GN=TCM_045490 PE=4 SV=1) HSP 1 Score: 574.318 bits (1479), Expect = 0.000e+0 Identity = 320/411 (77.86%), Postives = 345/411 (83.94%), Query Frame = 1 Query: 70 MATNGTSDIKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPGDSKACYGGLNELNTDLAKKSVLLGNGFTPSEADXXXXXXXXXXXXALSTPEKEKLPHVMRWMDYIQNSEDLGAHFEKILLEKPVFEPQMAKAAAKPEVTSSAKGTVQNTKIADKPDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSG-------------------IDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 1245 MAT+G +D KR+Q IVSS+CKHFSLDPKAFSS+VPGNDIK LY+NILKSSGKESP+NNDEVMKWIAFA+SFP DSKAC+G LNELN DLA+KSVLLGNGFTPSEADVIVFS +H+SVI LS EK+KLPHVMRWMDYIQ+ EDLGA F+KILLEKP FEPQ AKAAAKPE+ +AK TVQ+TKIADK AE NAKKSDS K K + + E DK+ LSVSLLNIQVGLI KAWKHPSADSLLVEEIDVGEAK+RQVVSGLAKYCSPE LTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHT VEPLLPPEGAKPGE +SFSG IDGKP+DVLNPKKKQLEKITP+LFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK Sbjct: 1 MATSGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPGNDIKNLYLNILKSSGKESPKNNDEVMKWIAFAESFPKDSKACHGVLNELNADLAQKSVLLGNGFTPSEADVIVFSAVHNSVIGLSNSEKDKLPHVMRWMDYIQSKEDLGALFQKILLEKPGFEPQRAKAAAKPEIDLNAKKTVQSTKIADKSVAEVNAKKSDSGKKAKGDKEAVQEKKKAPETEASDKDKE--LSVSLLNIQVGLICKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCSPEQLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTAVEPLLPPEGAKPGEHVSFSGHCCLSLLNVWSVLVQLILRIDGKPDDVLNPKKKQLEKITPHLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 409
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy TrEMBL
Match: A0A0D2VPV8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G209900 PE=4 SV=1) HSP 1 Score: 553.903 bits (1426), Expect = 0.000e+0 Identity = 328/337 (97.33%), Postives = 332/337 (98.52%), Query Frame = 1 Query: 70 MATNGTSDIKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPGDSKACYGGLNELNTDLAKKSVLLGNGFTPSEADXXXXXXXXXXXXALSTPEKEKLPHVMRWMDYIQNSEDLGAHFEKILLEKPVFEPQMAKAAAKPEVTSSAKGTVQNTKIADKPDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSG 1080 MATNGTSD+KRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFP DSKAC+GGLNELNTDLAKKSVLLGNGFTPSEADVIVFSVIHSS+IALSTPEKEKLPHVMRWMDYIQNSEDLGA FEKILLEKPVFEPQ+AKAAAKPEVTSSAKGTVQNTKIADKPD EKNAKKSDS DAKKKAKGDKEAVPEKKAPEKEASDKDKELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGE ISFSG Sbjct: 1 MATNGTSDLKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPSDSKACHGGLNELNTDLAKKSVLLGNGFTPSEADVIVFSVIHSSMIALSTPEKEKLPHVMRWMDYIQNSEDLGALFEKILLEKPVFEPQIAKAAAKPEVTSSAKGTVQNTKIADKPDTEKNAKKSDSADAKKKAKGDKEAVPEKKAPEKEASDKDKELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGECISFSG 337
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy TrEMBL
Match: A0A061FSM4_THECC (OB-fold nucleic acid binding domain-containing protein isoform 7 OS=Theobroma cacao GN=TCM_045490 PE=4 SV=1) HSP 1 Score: 546.969 bits (1408), Expect = 0.000e+0 Identity = 295/392 (75.26%), Postives = 316/392 (80.61%), Query Frame = 1 Query: 70 MATNGTSDIKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPGDSKACYGGLNELNTDLAKKSVLLGNGFTPSEADXXXXXXXXXXXXALSTPEKEKLPHVMRWMDYIQNSEDLGAHFEKILLEKPVFEPQMAKAAAKPEVTSSAKGTVQNTKIADKPDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 1245 MAT+G +D KR+Q IVSS+CKHFSLDPKAFSS+VPGNDIK LY+NILKSSGKESP+NNDEVMKWIAFA+SFP DSKAC+G LNELN DLA+KSVLLGNGFTPSEADVIVFS +H+SVI LS EK+KLPHVMRWMDYIQ+ EDLGA F+KILLEKP FEPQ K V K T+ +DK D E LSVSLLNIQVGLI KAWKHPSADSLLVEEIDVGEAK+RQVVSGLAKYCSPE LTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHT VEPLLPPEGAKPGE +SFSGIDGKP+DVLNPKKKQLEKITP+LFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK Sbjct: 1 MATSGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPGNDIKNLYLNILKSSGKESPKNNDEVMKWIAFAESFPKDSKACHGVLNELNADLAQKSVLLGNGFTPSEADVIVFSAVHNSVIGLSNSEKDKLPHVMRWMDYIQSKEDLGALFQKILLEKPGFEPQKKAKGDKEAVQEKKKAP--ETEASDK-DKE--------------------------------------LSVSLLNIQVGLICKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCSPEQLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTAVEPLLPPEGAKPGEHVSFSGIDGKPDDVLNPKKKQLEKITPHLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK 351
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy TrEMBL
Match: A0A061FSM1_THECC (OB-fold nucleic acid binding domain-containing protein isoform 2 OS=Theobroma cacao GN=TCM_045490 PE=4 SV=1) HSP 1 Score: 518.85 bits (1335), Expect = 1.348e-178 Identity = 292/361 (80.89%), Postives = 315/361 (87.26%), Query Frame = 1 Query: 70 MATNGTSDIKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPGDSKACYGGLNELNTDLAKKSVLLGNGFTPSEADXXXXXXXXXXXXALSTPEKEKLPHVMRWMDYIQNSEDLGAHFEKILLEKPVFEPQMAKAAAKPEVTSSAKGTVQNTKIADKPDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLF 1152 MAT+G +D KR+Q IVSS+CKHFSLDPKAFSS+VPGNDIK LY+NILKSSGKESP+NNDEVMKWIAFA+SFP DSKAC+G LNELN DLA+KSVLLGNGFTPSEADVIVFS +H+SVI LS EK+KLPHVMRWMDYIQ+ EDLGA F+KILLEKP FEPQ AKAAAKPE+ +AK TVQ+TKIADK AE S KK + +KKAPE EASDKDKELSVSLLNIQVGLI KAWKHPSADSLLVEEIDVGEAK+RQVVSGLAKYCSPE LTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHT VEPLLPPEGAKPGE +SFSGIDGKP+DVLNPKKKQLEKITP F Sbjct: 1 MATSGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPGNDIKNLYLNILKSSGKESPKNNDEVMKWIAFAESFPKDSKACHGVLNELNADLAQKSVLLGNGFTPSEADVIVFSAVHNSVIGLSNSEKDKLPHVMRWMDYIQSKEDLGALFQKILLEKPGFEPQRAKAAAKPEIDLNAKKTVQSTKIADKSVAE--VNAKKSDSGKKAKGDKEAVQEKKKAPETEASDKDKELSVSLLNIQVGLICKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCSPEQLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTAVEPLLPPEGAKPGEHVSFSGIDGKPDDVLNPKKKQLEKITPVCF 359
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy TrEMBL
Match: A0A061FT10_THECC (OB-fold nucleic acid binding domain-containing protein isoform 4 OS=Theobroma cacao GN=TCM_045490 PE=4 SV=1) HSP 1 Score: 481.871 bits (1239), Expect = 1.408e-164 Identity = 272/346 (78.61%), Postives = 297/346 (85.84%), Query Frame = 1 Query: 70 MATNGTSDIKRKQGIVSSLCKHFSLDPKAFSSQVPGNDIKTLYINILKSSGKESPQNNDEVMKWIAFADSFPGDSKACYGGLNELNTDLAKKSVLLGNGFTPSEADXXXXXXXXXXXXALSTPEKEKLPHVMRWMDYIQNSEDLGAHFEKILLEKPVFEPQMAKAAAKPEVTSSAKGTVQNTKIADKPDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVL 1107 MAT+G +D KR+Q IVSS+CKHFSLDPKAFSS+VPGNDIK LY+NILKSSGKESP+NNDEVMKWIAFA+SFP DSKAC+G LNELN DLA+KSVLLGNGFTPSEADVIVFS +H+SVI LS EK+KLPHVMRWMDYIQ+ EDLGA F+KILLEKP FEPQ AKAAAKPE+ +AK TVQ+TKIADK AE S KK + +KKAPE EASDKDKELSVSLLNIQVGLI KAWKHPSADSLLVEEIDVGEAK+RQVVSGLAKYCSPE LTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHT VEPLLPPEGAKPGE +SFSG+ +D + Sbjct: 1 MATSGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPGNDIKNLYLNILKSSGKESPKNNDEVMKWIAFAESFPKDSKACHGVLNELNADLAQKSVLLGNGFTPSEADVIVFSAVHNSVIGLSNSEKDKLPHVMRWMDYIQSKEDLGALFQKILLEKPGFEPQRAKAAAKPEIDLNAKKTVQSTKIADKSVAE--VNAKKSDSGKKAKGDKEAVQEKKKAPETEASDKDKELSVSLLNIQVGLICKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCSPEQLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTAVEPLLPPEGAKPGEHVSFSGLFSGHQDTV 344
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy Swiss-Prot
Match: SYM_ORYSJ (Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica GN=Os06g0508700 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.055e-41 Identity = 84/164 (51.22%), Postives = 113/164 (68.90%), Query Frame = 1 Query: 757 LSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPC-TSSIPKASIK 1245 ++V+ L+I+VGLIRKA KHP ADSL VEEIDVGE R VVSGL K+ E++ NR+V ++ N+KP +R + S +VL ASNEDHTKVE + PPE A GE ++F+G G+PE LN K K EK++ +L ++ + VA +K +PF TSAG C SI I+ Sbjct: 638 VTVAKLDIRVGLIRKAQKHPDADSLYVEEIDVGEEAPRTVVSGLVKFIPLEEMQNRKVCVLCNLKPVAMRGIKSHAMVLAASNEDHTKVELVEPPESAAVGERVTFAGYSGEPEASLNAKSKTWEKLSADLHSNGELVACYKDVPFTTSAGVCKVKSIASGEIR 801
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy Swiss-Prot
Match: SYMC_ARATH (Methionine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At4g13780 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.358e-41 Identity = 82/164 (50.00%), Postives = 116/164 (70.73%), Query Frame = 1 Query: 757 LSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPC-TSSIPKASIK 1245 ++++ L+I+VG I KA KHP AD+L VEEIDVG ++R VVSGL KY E++ NR V ++ N+KP K+RD++S+ +VL AS+ D +KVE + PP+ A GE ++F G +G+P+DVLNPKKK E + +L T E VA +K +PF TSAG C SSI +I+ Sbjct: 634 ITMARLDIRVGKIVKAEKHPKADALYVEEIDVGGGEIRTVVSGLVKYIPLEEMQNRMVCVLCNLKPAKMRDIVSQAMVLAASSSDGSKVELVEPPKTANIGERVTFPGFEGEPDDVLNPKKKVWETLLVDLNTKENLVACYKDVPFTTSAGVCKVSSISNGTIR 797
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy Swiss-Prot
Match: AIMP1_HUMAN (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Homo sapiens GN=AIMP1 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 1.931e-38 Identity = 74/156 (47.44%), Postives = 107/156 (68.59%), Query Frame = 1 Query: 757 LSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPF-MTSAGPCTS 1221 + VS L++++G I A KHP ADSL VEE+DVGE R VVSGL + E + NR V+L+ N+KP K+R V+S+ +V+CAS+ + K+E L PP G+ PG+ I+F G+P+ LNPKKK E+I P+L T+++ VAT+KG+PF + G C + Sbjct: 150 IDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSPE--KIEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRA 303
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy Swiss-Prot
Match: AIMP1_MOUSE (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus musculus GN=Aimp1 PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 3.202e-38 Identity = 74/146 (50.68%), Postives = 101/146 (69.18%), Query Frame = 1 Query: 757 LSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPF 1194 + S L++++G I A KHP ADSL VEE+DVGEA R VVSGL + E + NR VVL+ N+KP K+R V+S+ +V+CAS+ + KVE L PP G+ PG+ I+F G+P+ LNPKKK E+I P+L T+ + VAT+KG PF Sbjct: 148 IDASRLDLRIGCIVTAKKHPDADSLYVEEVDVGEAAPRTVVSGLVNHVPLEQMQNRMVVLLCNLKPAKMRGVLSQAMVMCASSPE--KVEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNAECVATYKGAPF 291
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy Swiss-Prot
Match: AIMP1_CRIGR (Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Cricetulus griseus GN=AIMP1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.904e-36 Identity = 71/146 (48.63%), Postives = 101/146 (69.18%), Query Frame = 1 Query: 757 LSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTKVEPLLPPEGAKPGEPISFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPF 1194 + VS L++++G I KHP ADSL VEE+DVGEA R V+SGL + + + NR VVL+ N+KP K+R ++S+ +V+CAS+ + KVE L PP G+ PG+ I+F G+P+ LNPKKK E+I P+L T+ + VAT+KG PF Sbjct: 197 VDVSRLDLRIGRIVTVKKHPDADSLYVEEVDVGEAAPRTVISGLVNHVPLDQMQNRMVVLLCNLKPAKMRGILSQAMVMCASSPE--KVEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNAECVATYKGSPF 340
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy Swiss-Prot
Match: SYYC_XENLA (Tyrosine--tRNA ligase, cytoplasmic OS=Xenopus laevis GN=yars PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.180e-31 Identity = 76/170 (44.71%), Postives = 101/170 (59.41%), Query Frame = 1 Query: 766 SLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNE-DHTKVEPLLPPEGAKPGEPISFSGID-GKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCTSSIPKASIK*KTKTIRG 1269 SLL+++VG I +HP ADSL VE +DVGEA R VVSGL +Y + L R VVL+ N+KP K+R + S+G++LCAS E + +VEPL PP G+ PGE I G + G+PE L PKKK EK+ + + A +KG F+T G T KT+RG Sbjct: 366 SLLDLRVGKILSVSQHPDADSLYVESVDVGEANPRCVVSGLVQYVPSDQLLGRSVVLLCNLKPQKMRGIESQGMLLCASTEGEQKQVEPLDPPSGSAPGERIYIEGYENGEPEGELKPKKKVFEKLQVDFRISDDLCAQWKGKNFLTKLGSVT-----------CKTLRG 524
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy Swiss-Prot
Match: SYYC_MOUSE (Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Yars PE=2 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 2.792e-31 Identity = 72/150 (48.00%), Postives = 100/150 (66.67%), Query Frame = 1 Query: 766 SLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTK-VEPLLPPEGAKPGEPISFSGID-GKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAG 1209 S L+I+VG I KHP ADSL VE+IDVGEA+ R VVSGL ++ E+L +R VV++ N+KP K+R V S+G++LCAS E ++ VEPL PP G+ PGE + G + G+P++ L PKKK EK+ + E+ +A +K FMT G Sbjct: 366 SRLDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVDSQGMLLCASVEGVSRQVEPLDPPAGSAPGERVFVQGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLG 515
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy Swiss-Prot
Match: SYYC_HUMAN (Tyrosine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=YARS PE=1 SV=4) HSP 1 Score: 129.798 bits (325), Expect = 3.070e-31 Identity = 72/150 (48.00%), Postives = 100/150 (66.67%), Query Frame = 1 Query: 766 SLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNED-HTKVEPLLPPEGAKPGEPISFSGID-GKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAG 1209 S L+I+VG I KHP ADSL VE+IDVGEA+ R VVSGL ++ E+L +R VV++ N+KP K+R V S+G++LCAS E + +VEPL PP G+ PGE + G + G+P++ L PKKK EK+ + E+ +A +K FMT G Sbjct: 366 SRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLG 515
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy Swiss-Prot
Match: SYYC_PONAB (Tyrosine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=YARS PE=2 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 3.783e-31 Identity = 72/150 (48.00%), Postives = 100/150 (66.67%), Query Frame = 1 Query: 766 SLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNED-HTKVEPLLPPEGAKPGEPISFSGID-GKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAG 1209 S L+I+VG I KHP ADSL VE+IDVGEA+ R VVSGL ++ E+L +R VV++ N+KP K+R V S+G++LCAS E + +VEPL PP G+ PGE + G + G+P++ L PKKK EK+ + E+ +A +K FMT G Sbjct: 366 SRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGERVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLG 515
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy Swiss-Prot
Match: SYYC_BOVIN (Tyrosine--tRNA ligase, cytoplasmic OS=Bos taurus GN=YARS PE=2 SV=4) HSP 1 Score: 129.028 bits (323), Expect = 6.085e-31 Identity = 71/153 (46.41%), Postives = 101/153 (66.01%), Query Frame = 1 Query: 766 SLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKVRQVVSGLAKYCSPEDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNED-HTKVEPLLPPEGAKPGEPISFSGID-GKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSAGPCT 1218 S L+I+VG + KHP ADSL VE+IDVGEA+ R VVSGL ++ E+L +R VV++ N+KP K+R V S+G++LCAS E + KVEPL PP G+ PGE + G + G+P++ L PKKK EK+ + ++ +A +K FMT G + Sbjct: 366 SRLDIRVGKVISVDKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVKSQGMLLCASVEGVNRKVEPLDPPAGSAPGERVFVKGYEKGQPDEELKPKKKVFEKLQADFKISDEYIAQWKQTNFMTKMGSVS 518 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0020566 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0020566 ID=g.arboreum_cottongen_reftransV1_0020566; Name=g.arboreum_cottongen_reftransV1_0020566; organism=Gossypium arboreum; type=contig; length=1485bpback to top |