g.arboreum_cottongen_reftransV1_0008826, g.arboreum_cottongen_reftransV1_0008826 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0008826
Unique Name	g.arboreum_cottongen_reftransV1_0008826
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	331

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr2	chromosome	g.arboreum_cottongen_reftransV1_0008826:1..331 . Chr2:74909857..74910377 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy TrEMBL
Match: A0A0B0N9F9_GOSAR (Potassium transporter 3 OS=Gossypium arboreum GN=F383_09678 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.911e-55
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = -2

Query:    1 RNLQSPTVKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 330
            RNLQSPTVKRFAERHKKAKTALLLLVLFGTCLLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL
Sbjct:   71 RNLQSPTVKRFAERHKKAKTALLLLVLFGTCLLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 180

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy TrEMBL
Match: A0A0B0NE23_GOSAR (Potassium transporter 3 OS=Gossypium arboreum GN=F383_09678 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.270e-55
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = -2

Query:    1 RNLQSPTVKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 330
            RNLQSPTVKRFAERHKKAKTALLLLVLFGTCLLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL
Sbjct:   87 RNLQSPTVKRFAERHKKAKTALLLLVLFGTCLLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 196

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy TrEMBL
Match: A0A0D2ML10_GOSRA (Potassium transporter OS=Gossypium raimondii GN=B456_003G084100 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 2.693e-52
Identity = 107/110 (97.27%), Postives = 107/110 (97.27%), Query Frame = -2

Query:    1 RNLQSPTVKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 330
            RN QS TVKRFAERHKKAKTALLLLVLFGTCLLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLS AAIGVYNIL
Sbjct:  122 RNPQSLTVKRFAERHKKAKTALLLLVLFGTCLLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSIAAIGVYNIL 231

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy TrEMBL
Match: A0A0D2QQ85_GOSRA (Potassium transporter OS=Gossypium raimondii GN=B456_003G084100 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.035e-51
Identity = 107/110 (97.27%), Postives = 107/110 (97.27%), Query Frame = -2

Query:    1 RNLQSPTVKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 330
            RN QS TVKRFAERHKKAKTALLLLVLFGTCLLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLS AAIGVYNIL
Sbjct:  122 RNPQSLTVKRFAERHKKAKTALLLLVLFGTCLLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSIAAIGVYNIL 231

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy TrEMBL
Match: A0A061G6R4_THECC (Potassium transporter OS=Theobroma cacao GN=TCM_016366 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.872e-41
Identity = 91/110 (82.73%), Postives = 104/110 (94.55%), Query Frame = -2

Query:    1 RNLQSPTVKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 330
            RNLQS + K+FAERHKK KTALLLLVLFGTCL+ICVGFLTPA+S+RS+IEG+KVRS+ LHYGVV++IACILLVGLFVLQHRGTYRVAFMFAPI+ILWSL  AAIG+YNI+
Sbjct:  123 RNLQSSSAKKFAERHKKLKTALLLLVLFGTCLVICVGFLTPAMSVRSSIEGLKVRSNNLHYGVVVVIACILLVGLFVLQHRGTYRVAFMFAPILILWSLCIAAIGLYNII 232

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy TrEMBL
Match: A0A061G5M9_THECC (Potassium transporter OS=Theobroma cacao GN=TCM_016366 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.896e-41
Identity = 91/110 (82.73%), Postives = 104/110 (94.55%), Query Frame = -2

Query:    1 RNLQSPTVKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 330
            RNLQS + K+FAERHKK KTALLLLVLFGTCL+ICVGFLTPA+S+RS+IEG+KVRS+ LHYGVV++IACILLVGLFVLQHRGTYRVAFMFAPI+ILWSL  AAIG+YNI+
Sbjct:  122 RNLQSSSAKKFAERHKKLKTALLLLVLFGTCLVICVGFLTPAMSVRSSIEGLKVRSNNLHYGVVVVIACILLVGLFVLQHRGTYRVAFMFAPILILWSLCIAAIGLYNII 231

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy TrEMBL
Match: B9RCK1_RICCO (Potassium transporter OS=Ricinus communis GN=RCOM_1689440 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.397e-30
Identity = 68/110 (61.82%), Postives = 91/110 (82.73%), Query Frame = -2

Query:    1 RNLQSPTVKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 330
            RN+     K+  ER KK KTALLL+VLFG  ++I +G LTPAIS+ S+IEG++++++ LH+G+V++IACI+L+GLFVLQ+RGT+RVAFMFAPIVILW LS A IG YNI+
Sbjct:  122 RNVAPSQSKKVVERRKKTKTALLLVVLFGASMVIAIGVLTPAISVLSSIEGLQLQANNLHHGMVVLIACIVLIGLFVLQYRGTHRVAFMFAPIVILWLLSIAIIGAYNII 231

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy TrEMBL
Match: A0A0A7RTG8_PRUPE (Potassium transporter OS=Prunus persica GN=KUP4 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.129e-28
Identity = 67/111 (60.36%), Postives = 88/111 (79.28%), Query Frame = -2

Query:    1 NLQSPT--VKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 327
            N   PT  +K F ERHK A+T LLLLVLFG  ++ICVG LTPAIS+ +++EG+K ++ +LH  VV++IACILLV LFVLQHRG +++AF+F PIVILW L  AA+G+YNI+
Sbjct:   48 NTNRPTSPLKGFIERHKSAQTCLLLLVLFGASMVICVGILTPAISVFASVEGLKFQAKDLHNSVVVLIACILLVALFVLQHRGIHKLAFIFTPIVILWVLLVAAVGIYNII 158

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy TrEMBL
Match: M5WDQ0_PRUPE (Potassium transporter (Fragment) OS=Prunus persica GN=PRUPE_ppa022284mg PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.331e-28
Identity = 67/111 (60.36%), Postives = 88/111 (79.28%), Query Frame = -2

Query:    1 NLQSPT--VKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 327
            N   PT  +K F ERHK A+T LLLLVLFG  ++ICVG LTPAIS+ +++EG+K ++ +LH  VV++IACILLV LFVLQHRG +++AF+F PIVILW L  AA+G+YNI+
Sbjct:  104 NTNRPTSPLKGFIERHKSAQTCLLLLVLFGASMVICVGILTPAISVFASVEGLKFQAKDLHNSVVVLIACILLVALFVLQHRGIHKLAFIFTPIVILWVLLVAAVGIYNII 214

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy TrEMBL
Match: B6U7Z6_MAIZE (Potassium transporter OS=Zea mays PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.016e-28
Identity = 63/110 (57.27%), Postives = 85/110 (77.27%), Query Frame = -2

Query:    1 RNLQSPTVKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 330
            RN  SP ++RF E+HKK +T  LL+VL G  ++I  G LTPAIS+ S++ G+ VR++ LH+  V++++CI+LVGLF LQHRGT +VAFMFAPIVI+W LS   IG+YNIL
Sbjct:  133 RNGSSPWLRRFLEKHKKMRTLFLLIVLCGASMVIGDGVLTPAISVLSSMSGLHVRATGLHHSSVVLLSCIVLVGLFALQHRGTQKVAFMFAPIVIIWLLSIGGIGLYNIL 242

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy Swiss-Prot
Match: HAK24_ORYSJ (Potassium transporter 24 OS=Oryza sativa subsp. japonica GN=HAK24 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.127e-17
Identity = 51/99 (51.52%), Postives = 70/99 (70.71%), Query Frame = -2

Query:    1 ERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVR-SSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 294
            ERH+  +  LLLL L GTC++I  G LTPA+S+ SA+ G+++    + H  ++L I C++LV LF LQH GT+RV F+FAPIV LW L  + IGVYNI+
Sbjct:  143 ERHRVLQRLLLLLALLGTCMVIGDGVLTPAVSVFSAVSGLELSMDKDQHKYILLPITCVILVCLFALQHYGTHRVGFLFAPIVCLWLLCISIIGVYNII 241

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy Swiss-Prot
Match: HAK25_ORYSJ (Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.606e-17
Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = -2

Query:    1 GFLTPAISIRSAIEGVKVR-SSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 222
            G LTPA+S+ SA+ G+++    E H  V L + C +L+GLF LQH GT+RV F+FAPIV +W L  +AIGVYNI+
Sbjct:  169 GVLTPAVSVYSAVSGLELSMEHEHHKYVQLPVTCAILIGLFALQHYGTHRVGFIFAPIVCVWLLCISAIGVYNIV 243

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy Swiss-Prot
Match: HAK6_ORYSJ (Potassium transporter 6 OS=Oryza sativa subsp. japonica GN=HAK6 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.437e-17
Identity = 50/110 (45.45%), Postives = 77/110 (70.00%), Query Frame = -2

Query:    1 RNLQSPTVKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 330
            R  +   ++ F E   KA+ A+ ++VL GTC+LI  G LTPAIS+ SA++G++ RSS +    V++++ ++LV LF++Q  GT RV+F F+PI++LW  S A IGVYNI+
Sbjct:  181 RRSRPSRLQLFLENSPKAQLAITIIVLIGTCMLIGDGALTPAISVLSAVQGIQSRSSHIKQKHVVVLSAVILVLLFLVQRFGTSRVSFTFSPIMLLWFASIAGIGVYNIV 290

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy Swiss-Prot
Match: POT9_ARATH (Potassium transporter 9 OS=Arabidopsis thaliana GN=POT9 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.415e-16
Identity = 47/101 (46.53%), Postives = 73/101 (72.28%), Query Frame = -2

Query:    4 KRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNI 306
            K++ E  +  K ALL++VL GTC++I  G LTPAIS+ SA  G+KV + ++   +V+++A ++L+GLF +QH GT +V ++FAPIV++W L   A G+YNI
Sbjct:  172 KKWLEGKEWRKRALLVVVLLGTCMMIGDGILTPAISVLSATGGIKVNNPKMSGDIVVLVAIVILIGLFSMQHYGTDKVGWLFAPIVLIWFLFIGATGMYNI 272

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy Swiss-Prot
Match: HAK10_ORYSJ (Potassium transporter 10 OS=Oryza sativa subsp. japonica GN=HAK10 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.445e-16
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = -2

Query:    1 ERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVR-SSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 294
            ERHK  +  LL+L L GTC++I  G LTPAIS+ SA+ G+++      H  V + IAC +LV LF LQH GT+RV F+FAPIVI W L  + IGVYNI+
Sbjct:  176 ERHKVLQRVLLVLALVGTCMVIGDGVLTPAISVFSAVSGLELSMEKHQHKYVEVPIACFVLVCLFCLQHYGTHRVGFLFAPIVITWLLCISMIGVYNIV 274

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy Swiss-Prot
Match: HAK13_ORYSJ (Probable potassium transporter 13 OS=Oryza sativa subsp. japonica GN=HAK13 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.244e-16
Identity = 43/94 (45.74%), Postives = 64/94 (68.09%), Query Frame = -2

Query:   40 QSPTVKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILW 321
             S  +K F E+H   +  LLL VL GT ++I  G LTP +S+ +A+ G++++  ELH    +++AC++L+GLF LQH GT RV F+FAPI+I W
Sbjct:  141 NSMLIKAFFEKHYSLRVVLLLFVLMGTSMVIGDGVLTPTMSVLAAVSGLRIKFPELHENYTVLLACVILIGLFALQHYGTRRVGFLFAPILISW 234

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy Swiss-Prot
Match: POT8_ARATH (Potassium transporter 8 OS=Arabidopsis thaliana GN=POT8 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.068e-15
Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = -2

Query:    1 TVKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVR-SSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNIL 312
            ++K   E+HK  +  LL+L L GTC++I  G LTPAIS+ SA+ G+++  S + H  V + + C +L+ LF LQH GT+R+ F+FAPIV+ W L  + IGVYNI 
Sbjct:  140 SLKNTLEKHKFLQNMLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKQQHQYVEVPVVCAILILLFSLQHYGTHRLGFVFAPIVLAWLLCISTIGVYNIF 244

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy Swiss-Prot
Match: POT11_ARATH (Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.140e-14
Identity = 55/101 (54.46%), Postives = 73/101 (72.28%), Query Frame = -2

Query:    4 KRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNI 306
            KR+ E+    KTALL+LVL GTC++I  G LTPAIS+ SA  G++V    +  GVV+ +A ++LV LF +QH GT RV ++FAPIV LW LS A+IG+YNI
Sbjct:  172 KRWLEKRTSRKTALLILVLVGTCMVIGDGILTPAISVLSAAGGLRVNLPHISNGVVVFVAVVILVSLFSVQHYGTDRVGWLFAPIVFLWFLSIASIGMYNI 272

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy Swiss-Prot
Match: HAK18_ORYSJ (Potassium transporter 18 OS=Oryza sativa subsp. japonica GN=HAK18 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.354e-14
Identity = 45/102 (44.12%), Postives = 70/102 (68.63%), Query Frame = -2

Query:    4 VKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNI 309
            ++R+ E H+  K  +L+LVLFGTC+ +  G LTPAIS+ SA  G++V    +   VV+II+ ++L+GLF +QH GT +V+++FAPIV +W +    +G  NI
Sbjct:  160 IQRWLEGHQFRKNLILILVLFGTCMAVGDGILTPAISVLSATGGIQVEEGRMRNDVVVIISVLILIGLFSMQHYGTDKVSWLFAPIVFVWFILIGILGAVNI 261

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy Swiss-Prot
Match: HAK12_ORYSJ (Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.100e-14
Identity = 50/109 (45.87%), Postives = 72/109 (66.06%), Query Frame = -2

Query:    4 RNLQSPTVKRFAERHKKAKTAXXXXXXXXXXXLICVGFLTPAISIRSAIEGVKVRSSELHYGVVLIIACILLVGLFVLQHRGTYRVAFMFAPIVILWSLSTAAIGVYNI 330
             N  +  +KR+ E H   K  LL+LVL GTC  I  G LTPAIS+ SA  G++V++ ++   VV+++A I+L+GLF +QH GT +V ++FAPIV+LW +    IG  NI
Sbjct:  154 ENSLAAKIKRWLEGHVYKKNCLLILVLIGTCTAIGDGILTPAISVLSASGGIRVQNQKMSTDVVVVVAVIILIGLFSMQHYGTDKVGWLFAPIVLLWFILIGTIGALNI 262

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0B0N9F9_GOSAR	1.911e-55	100.00	Potassium transporter 3 OS=Gossypium arboreum GN=F...	[more]
A0A0B0NE23_GOSAR	2.270e-55	100.00	Potassium transporter 3 OS=Gossypium arboreum GN=F...	[more]
A0A0D2ML10_GOSRA	2.693e-52	97.27	Potassium transporter OS=Gossypium raimondii GN=B4...	[more]
A0A0D2QQ85_GOSRA	1.035e-51	97.27	Potassium transporter OS=Gossypium raimondii GN=B4...	[more]
A0A061G6R4_THECC	1.872e-41	82.73	Potassium transporter OS=Theobroma cacao GN=TCM_01...	[more]
A0A061G5M9_THECC	1.896e-41	82.73	Potassium transporter OS=Theobroma cacao GN=TCM_01...	[more]
B9RCK1_RICCO	1.397e-30	61.82	Potassium transporter OS=Ricinus communis GN=RCOM_...	[more]
A0A0A7RTG8_PRUPE	1.129e-28	60.36	Potassium transporter OS=Prunus persica GN=KUP4 PE...	[more]
M5WDQ0_PRUPE	1.331e-28	60.36	Potassium transporter (Fragment) OS=Prunus persica...	[more]
B6U7Z6_MAIZE	2.016e-28	57.27	Potassium transporter OS=Zea mays PE=2 SV=1	[more]

Pages

BLAST of g.arboreum_cottongen_reftransV1_0008826 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
HAK24_ORYSJ	7.127e-17	51.52	Potassium transporter 24 OS=Oryza sativa subsp. ja...	[more]
HAK25_ORYSJ	7.606e-17	53.33	Potassium transporter 25 OS=Oryza sativa subsp. ja...	[more]
HAK6_ORYSJ	9.437e-17	45.45	Potassium transporter 6 OS=Oryza sativa subsp. jap...	[more]
POT9_ARATH	1.415e-16	46.53	Potassium transporter 9 OS=Arabidopsis thaliana GN...	[more]
HAK10_ORYSJ	1.445e-16	53.54	Potassium transporter 10 OS=Oryza sativa subsp. ja...	[more]
HAK13_ORYSJ	6.244e-16	45.74	Probable potassium transporter 13 OS=Oryza sativa ...	[more]
POT8_ARATH	2.068e-15	46.67	Potassium transporter 8 OS=Arabidopsis thaliana GN...	[more]
POT11_ARATH	1.140e-14	54.46	Potassium transporter 11 OS=Arabidopsis thaliana G...	[more]
HAK18_ORYSJ	1.354e-14	44.12	Potassium transporter 18 OS=Oryza sativa subsp. ja...	[more]
HAK12_ORYSJ	3.100e-14	45.87	Putative potassium transporter 12 OS=Oryza sativa ...	[more]

Pages

InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003855	Potassium transporter	PFAM	PF02705	K_trans	coord: 7..107 e-value: 6.0E-29 score: 100.9
None	No IPR available	PANTHER	PTHR30540	OSMOTIC STRESS POTASSIUM TRANSPORTER	coord: 1..107
None	No IPR available	PANTHER	PTHR30540:SF9	POTASSIUM TRANSPORTER 4	coord: 1..107
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 88..107
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 58..76
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 77..87
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..42
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 43..57
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 38..42
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 108..108
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 19..37
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..18
None	No IPR available	TMHMM	TMhelix		coord: 57..76
None	No IPR available	TMHMM	TMhelix		coord: 83..105
None	No IPR available	TMHMM	TMhelix		coord: 20..42

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0008826 ID=g.arboreum_cottongen_reftransV1_0008826; Name=g.arboreum_cottongen_reftransV1_0008826; organism=Gossypium arboreum; type=contig; length=331bp
AAGGATATTGTAAACACCAATAGCCGCAGTGGACAATGACCATAAAATCA
CAATGGGAGCAAACATGAAGGCCACTCTATAGGTGCCACGGTGTTGCAAA
ACAAAGAGGCCAACCAACAAAATACAGGCTATGATAAGCACCACACCATA
ATGCAGTTCGCTTGATCGAACTTTGACCCCTTCAATGGCCGAACGAATGG
AAATTGCCGGCGTGAGAAAGCCAACACAAATAAGCAGGCAAGTACCAAAC
AAAACTAGAAGCAGCAAAGCAGTTTTTGCCTTTTTATGCCTCTCGGCAAA
CCTTTTGACTGTCGGAGACTGCAGATTTCTG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR003855	K+_transporter

Vocabulary: **Molecular Function**
Term	Definition
GO:0015079	potassium ion transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0071805	potassium ion transmembrane transport

Search form

g.arboreum_cottongen_reftransV1_0008826, g.arboreum_cottongen_reftransV1_0008826 (contig) Gossypium arboreum

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