g.arboreum_cottongen_reftransV1_0008254, g.arboreum_cottongen_reftransV1_0008254 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0008254
Unique Nameg.arboreum_cottongen_reftransV1_0008254
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1379
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr13chromosomeg.arboreum_cottongen_reftransV1_0008254:1..1379 .
Chr13:49840680..49843165 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A0B2Q926_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_030252 PE=4 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 3.832e-63
Identity = 185/364 (50.82%), Postives = 232/364 (63.74%), Query Frame = -2
Query:  245 TKMVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSC--------EPPIEPKLKAKLEPEPS------EGLKTGPPLQEVKV--DIVGGSDGGGCLVKSEDEQTEKDINLQVDEKP--PEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQG-TVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANL-AGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPW 1276
            + MVAISLYRGNLHR P+V  RW MP PKI+LKDFKSLL RR +ALS                  ++Q+P S         EPP  P +       PS      +G +   PL  V      + GSD       SE  Q +  I+    +KP  PEE +T   V++ ++  N K+KRK+++EEKLQ LN  KH+LV VLKQILNAEEELKRRN  Q   ++ P+VPLQ + TND+G M R + PR+G   NL A + DG E DD +N+ +HSRHV R SS SPSSESPLRR   +Q NV+SHPSR ++G  GSPSRFA +G+QG+P N P+VSVSGT+++ASSPSPAASGGTSV R+A QPSPW
Sbjct:    8 SSMVAISLYRGNLHRVPDVPRRWPMPAPKITLKDFKSLLARRSKALS------------------RLQNPNSTPLPNGSQPEPP--PTVTVNHGEGPSTTVAREDGYRKETPLVAVSSAKKPLAGSD-------SEKPQLDSKIDEASVKKPSAPEEEQTE-PVAENVDQLNEKKKRKKEIEEKLQGLNDNKHNLVLVLKQILNAEEELKRRNSMQVVAMHGPSVPLQGDGTNDTGLMIRHMPPRLGSQGNLVAADVDGGEGDDFANYTMHSRHVLRTSSMSPSSESPLRRTPSVQQNVISHPSRANIGAAGSPSRFALSGHQGNPVNLPSVSVSGTSYIASSPSPAASGGTSVFRDARQPSPW 343          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: I1JX06_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 2.359e-62
Identity = 182/353 (51.56%), Postives = 230/353 (65.16%), Query Frame = -2
Query:  245 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSP--VSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDI--VGGSDGGGCLVKSEDEQTEKDINLQVDEKPPE-----EAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQG-TVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANL-AGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPW 1270
            MVAISLYRGNLHR P+V  RW MP PKI+LKDFKSLL RR +ALSRL++S+ +          Q + P  V+      P      E    +G +   PL  V      + GSD       SE  Q +  I+    +KP +     E K    V++ ++  N K+KRK+++EEKLQ LN  KH+LV VLKQILNAEEELKRRN  Q   ++ P+VPLQ + TND+G M R + PR+G   NL A + DG E DD +N+ +HSRHV R SS SPSSESPLRR   +Q NV+SHPSR ++G  GSPSRFA +G+QG+P N P+VSVSGT+++ASSPSPAASGGTSV R+A QPSPW
Sbjct:   10 MVAISLYRGNLHRVPDVPRRWPMPAPKITLKDFKSLLARRSKALSRLQNSNPNPTPTPLPNGSQTEPPPTVTVNHGEGPSTTVARE----DGYRKETPLVAVSSAKKPLAGSD-------SEKPQLDSKIDEASVKKPSDGVAASEEKQTEPVAENVDQLNEKKKRKKEIEEKLQGLNDNKHNLVLVLKQILNAEEELKRRNSMQVVAMHGPSVPLQGDGTNDTGLMIRHMPPRLGSQGNLVAADVDGGEGDDFANYTMHSRHVLRTSSMSPSSESPLRRTPSLQQNVISHPSRANIGAAGSPSRFALSGHQGNPVNLPSVSVSGTSYIASSPSPAASGGTSVFRDARQPSPW 351          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: V4TMN0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020740mg PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.567e-60
Identity = 143/203 (70.44%), Postives = 166/203 (81.77%), Query Frame = -2
Query:  242 NVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 850
            NV+ S+K +   GKEKRK+++EEKL+ LNAKKH+LVQ LKQ+LNAEEELKRRN TQG V RP  PLQV+ T++SG M R  TPR G +ANL G+ +G EA+D SN N HSRH+ RMSS SPSSESPLRRPT +QHNVV HPSR S+ VTGSPSRFAP G+QG+ GN PTV VSGTN+VASSPSPAASGGTSV R+A QPSPWN
Sbjct:  162 NVQTSNKPDVLYGKEKRKKEIEEKLETLNAKKHNLVQALKQLLNAEEELKRRNCTQGMVIRPTGPLQVDVTSESGLMARQTTPRTGSEANLVGDTEGAEAEDASNQNAHSRHMLRMSSMSPSSESPLRRPTILQHNVVPHPSRASLAVTGSPSRFAPPGHQGNSGNLPTVCVSGTNYVASSPSPAASGGTSVFRDARQPSPWN 364          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: B9R913_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1512970 PE=4 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.070e-59
Identity = 187/373 (50.13%), Postives = 226/373 (60.59%), Query Frame = -2
Query:  242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAK------------LEPEPSEGLKTGPPLQEVKV-DIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKIN-DFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGE-NDGVEADDV--------SNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGN--PP-----TVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270
            MVAISLYRGNLHR P+V  RWLMPT +ISL   K       R    L    SS  +  +   + I +P        P L A             LE E     +     +EVK  D +  S+      K +        NLQV+++  E+ + N E + K +   N +EKR+ +VEEKLQVLN KKHSLVQVLKQILN EEELKRRN  QG     + PLQV+ TNDS SM+R  TPRMG +ANL G+  +G E +DV        +N+  HSRHV RMSSTSPSSESPLR+P +IQHNVV +PSR S+  T SPSRFAPTG+QG P N  PP     +VSVSGTN++ASSPSPAASGGTS  R+A QPSPWN
Sbjct:   29 MVAISLYRGNLHRVPDVPRRWLMPTRQISL---KDFKSLLSRRTKALSRLPSSAVTAVATTSYYISNP-------NPTLNASTGDNNTILVASPLELEKGTNREKEGASKEVKDHDDLSNSEKPHIPEKGDAAVNHSGENLQVEKQDLEDNR-NTETTCKTDLAVNDQEKRQNEVEEKLQVLNQKKHSLVQVLKQILNVEEELKRRNIAQGIA---SAPLQVDVTNDSVSMSRHATPRMGSEANLGGDMMEGGEIEDVPNVNMNNNNNNYNHSRHVKRMSSTSPSSESPLRKPPFIQHNVVPYPSRPSLRTTSSPSRFAPTGHQGPPANVLPPVSVSVSVSVSGTNYIASSPSPAASGGTSAFRDARQPSPWN 387          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A059CZ51_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00389 PE=4 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.883e-58
Identity = 148/248 (59.68%), Postives = 172/248 (69.35%), Query Frame = -2
Query:  242 EVKVDIVGGS---DGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 976
            E K D VG S   DGGG +  S  E+ E+ +N +V +    +A T             +EKRK+ VEEKLQ LNAKKHSLVQVLKQILNAEEELKRR G QGTV RP+ PL V+  NDSGSMTRL TPRMG +A+  G+ +G EADD SNH + SR + RMSS SPS ESPLRRP   QH  V +PSR+S+ V GSPSRFAP  +Q H  N P VSVSGTN+ ASSPSPAASGGTS  ++A  PSPWN
Sbjct:  122 EAKPDWVGKSAEGDGGGQV--SAAEKAEEPVNNEVQDADKVDAPTT-----------DREKRKKVVEEKLQTLNAKKHSLVQVLKQILNAEEELKRR-GMQGTVARPSGPLHVDVMNDSGSMTRLNTPRMGCEAHFGGDMEGGEADDASNHIMPSRPMLRMSSVSPSPESPLRRPALSQHIPVLYPSRSSLAVGGSPSRFAPPASQAHLANLPAVSVSGTNYFASSPSPAASGGTSAFKDARLPSPWN 355          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: V4THU6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020740mg PE=4 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 3.518e-58
Identity = 142/203 (69.95%), Postives = 165/203 (81.28%), Query Frame = -2
Query:  242 NVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 850
            NV+ S+K +   GKEKRK+++EEKL+ LNAKKH+LVQ LKQ+LNAEEELKRRN TQG V RP  PLQV+ T++SG M R  TPR G +ANL G+ +G EA+D SN N HSRH+ RMSS SPSSESPLRRPT +QHN V HPSR S+ VTGSPSRFAP G+QG+ GN PTV VSGTN+VASSPSPAASGGTSV R+A QPSPWN
Sbjct:  162 NVQTSNKPDVLYGKEKRKKEIEEKLETLNAKKHNLVQALKQLLNAEEELKRRNCTQGMVIRPTGPLQVDVTSESGLMARQTTPRTGSEANLVGDTEGAEAEDASNQNAHSRHMLRMSSMSPSSESPLRRPTILQHN-VPHPSRASLAVTGSPSRFAPPGHQGNSGNLPTVCVSGTNYVASSPSPAASGGTSVFRDARQPSPWN 363          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: I1KCM6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.588e-57
Identity = 183/364 (50.27%), Postives = 229/364 (62.91%), Query Frame = -2
Query:  245 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLK--TGPPLQEVKVD-------IVGGSDGGGCLVKSEDEQTEKDINL-QVDEK-------PPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNR-PAVPLQVETTNDSGSMTRLVTPRMGLDANL--AGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXX--PTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPW 1270
            MVAISLYRGNLHR P+V  RW MP PKI+LKDFKSLL RR +ALS                  ++Q+P S   P      ++ EP P+  +    GP +   + D       +V  S     L  S+ E+ + D  + +  EK        PEE +T   V++  +  N K+KRK+++EEKL  LN  KH+LV VLKQILNAEEELKRRN  Q    R P+VPLQ + TND+GSM R + PR+G + NL  A  + G E DD +NH +HSRHV R SS SPSSES LRR     IQ NV+SHPSR +MG  GSPSRFA +G+QG+P N P+VSVSGT+++ASSPSPAASGGTSV R+A QPSPW
Sbjct:   11 MVAISLYRGNLHRVPDVPRRWPMPAPKITLKDFKSLLARRSKALS------------------RLQNPNSTPLPN----GSQPEPPPTVTVNHGEGPSITVAREDGDRNETPLVAVSSAKKPLAGSDSEKPQLDSKIDEASEKKTSDGVAAPEEEQTE-PVAENEDLLNEKKKRKKEIEEKLHGLNDNKHNLVLVLKQILNAEEELKRRNSMQVVAMRGPSVPLQGDGTNDTGSMIRHMPPRLGSEGNLVAADVDGGGEGDDFANHTMHSRHVLRTSSMSPSSESTLRRTPSISIQQNVISHPSRANMGAAGSPSRFALSGHQGNPMNLPSVSVSGTSYIASSPSPAASGGTSVFRDARQPSPW 351          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: M1D6J1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400033064 PE=4 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 3.747e-56
Identity = 175/348 (50.29%), Postives = 220/348 (63.22%), Query Frame = -2
Query:  260 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPL------QEVKVDIV----GGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKE-KRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAW 1270
            MVA+SLY+GNLHR PE   RWLMPTPKISLKDF+ LL RR RALSRL +    +P+  +                 P LK   + +P E +    P+      ++V+V+ V       D    +V+ + E  E D  L V   P     + +E    IN  +G + ++K+++E+KLQVLN KKH LVQ+LKQILNAEEELKRR+  QG   RP++PLQV+TTND+GS+T+L TPRMG D N  GE DG   DD SN N  SR++ RMSSTSPSS+S LR+  Y   NVV   SR S+GVT SPSRFAP G QG   N P +S+SGTNFVASSPSP ASGGTS  R+ +
Sbjct:    1 MVALSLYKGNLHRVPETPRRWLMPTPKISLKDFRCLLRRRSRALSRLPTPPDVSPTTATASNPN------------PNLKTDTKSKPEEEVPVSVPVKTEKEEEDVRVENVEVPEKLVDSSAVVVEPKLEVLENDQKLLVPMNP-----SGLET---INKEDGTDNQKKKEIEDKLQVLNMKKHGLVQLLKQILNAEEELKRRS-MQGMAVRPSLPLQVDTTNDTGSITKLNTPRMGSDGNPIGEVDGDGGDDASNQNTLSRNLLRMSSTSPSSDSQLRKTPY---NVVPLASR-SVGVTVSPSRFAPPGQQGQLSNLPPMSLSGTNFVASSPSPVASGGTSAFRDRF 323          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A0B2QHH2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_012278 PE=4 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.333e-55
Identity = 183/366 (50.00%), Postives = 229/366 (62.57%), Query Frame = -2
Query:  245 MVAISLYRGNLH--RAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLK--TGPPLQEVKVD-------IVGGSDGGGCLVKSEDEQTEKDINL-QVDEK-------PPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNR-PAVPLQVETTNDSGSMTRLVTPRMGLDANL--AGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXX--PTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPW 1270
            MVAISLYRGNLH  R P+V  RW MP PKI+LKDFKSLL RR +ALS                  ++Q+P S   P      ++ EP P+  +    GP +   + D       +V  S     L  S+ E+ + D  + +  EK        PEE +T   V++  +  N K+KRK+++EEKL  LN  KH+LV VLKQILNAEEELKRRN  Q    R P+VPLQ + TND+GSM R + PR+G + NL  A  + G E DD +NH +HSRHV R SS SPSSES LRR     IQ NV+SHPSR +MG  GSPSRFA +G+QG+P N P+VSVSGT+++ASSPSPAASGGTSV R+A QPSPW
Sbjct:   11 MVAISLYRGNLHLHRVPDVPRRWPMPAPKITLKDFKSLLARRSKALS------------------RLQNPNSTPLPN----GSQPEPPPTVTVNHGEGPSITVAREDGDRNETPLVAVSSAKKPLAGSDSEKPQLDSKIDEASEKKTSDGVAAPEEEQTE-PVAENEDLLNEKKKRKKEIEEKLHGLNDNKHNLVLVLKQILNAEEELKRRNSMQVVAMRGPSVPLQGDGTNDTGSMIRHMPPRLGSEGNLVAADVDGGGEGDDFANHTMHSRHVLRTSSMSPSSESTLRRTPSISIQQNVISHPSRANMGAAGSPSRFALSGHQGNPMNLPSVSVSGTSYIASSPSPAASGGTSVFRDARQPSPW 353          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: K4C8J0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc06g071170.2 PE=4 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.452e-55
Identity = 171/353 (48.44%), Postives = 214/353 (60.62%), Query Frame = -2
Query:  260 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPI------EPKLKAKLEPEPSEGLKTGPPL------QEVKVDIVGGS----DGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAW 1270
            MVA+SLY+GNLHR PE   RWL+PTPKIS KDF+ LL RR RA                    ++Q+P    P         P LK   + +P + +    P+      ++V+V+ V       D    +V+ + E  E D  L+    P     + VE S+K  D    +KRK ++E+KLQVLN KKH LVQ+LKQILNAEEELKRR+  QG   RP+ PLQV+TTND+GS+T+L TPRMGLD N  GE DG   DD SN N   R++ R+SSTSPSS+S LR+  Y   NVV   SR S+GVT SPSRFAP G QG P + P VS+SGTN VASSPSP ASGGTS  R+ +
Sbjct:    1 MVALSLYKGNLHRVPETPRRWLVPTPKISHKDFQCLLRRRSRA------------------LSRLQNPPDVSPTTATASNPNPNLKTDTKSKPEDEVPVSIPVKIEKEEEDVRVENVKEPEKLVDSSAVVVEPKLEVLENDQKLEGQVNP-----SGVETSNK-EDATDNQKRK-EIEDKLQVLNMKKHGLVQLLKQILNAEEELKRRS-MQGMAVRPSPPLQVDTTNDTGSITKLNTPRMGLDGNPIGEVDGDGGDDASNQNTLPRNLLRLSSTSPSSDSQLRKTPY---NVVPLASR-SVGVTVSPSRFAPPGQQGQPSSLPPVSLSGTNIVASSPSPVASGGTSAFRDRF 323          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B2Q926_GLYSO3.832e-6350.82Uncharacterized protein OS=Glycine soja GN=glysoja... [more]
I1JX06_SOYBN2.359e-6251.56Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
V4TMN0_9ROSI1.567e-6070.44Uncharacterized protein OS=Citrus clementina GN=CI... [more]
B9R913_RICCO3.070e-5950.13Putative uncharacterized protein OS=Ricinus commun... [more]
A0A059CZ51_EUCGR1.883e-5859.68Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
V4THU6_9ROSI3.518e-5869.95Uncharacterized protein OS=Citrus clementina GN=CI... [more]
I1KCM6_SOYBN1.588e-5750.27Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
M1D6J1_SOLTU3.747e-5650.29Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
A0A0B2QHH2_GLYSO1.333e-5550.00Uncharacterized protein OS=Glycine soja GN=glysoja... [more]
K4C8J0_SOLLC5.452e-5548.44Uncharacterized protein OS=Solanum lycopersicum GN... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 151..171
NoneNo IPR availablePANTHERPTHR36764FAMILY NOT NAMEDcoord: 2..343
NoneNo IPR availablePANTHERPTHR36764:SF1SUBFAMILY NOT NAMEDcoord: 2..343

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0008254 ID=g.arboreum_cottongen_reftransV1_0008254; Name=g.arboreum_cottongen_reftransV1_0008254; organism=Gossypium arboreum; type=contig; length=1379bp
AGAGAATGGAAGAAATCCAAAAGAAAAATGAAAAAAAAGAAGAAGCTTCA
ACTTCAATAAATGGCTAACAAGTAAAAGGCGGCATCTCCACAGACCTGAT
AATATTATATGAAATTGAGAACCGATGTTCTCGCTTTGATTAAGCAGGAA
GAACTAGAAAGGGCTTACAATGTTGCCAAGCTCGCAATACACATCTTAGA
GGCTCAAGTCACAAGAAAAGTTCAATTTGCTACAGATTCTAATTCCATGG
GCTTGGCTGCCAAGCCTCTCGTAAGACTGAAGTGCCACCAGATGCTGCAG
GGGAAGGAGATGATGCAACGAAATTTGTTCCTGACACAGATACGGTGGGA
GGATTCCCAGGATGACCTTGATTTCCAGTAGGAGCAAAACGTGAAGGACT
ACCTGTGACCCCCATGCTTGTTCGAGAAGGGTGGGAAACCACATTATGTT
GAATGTAGGTAGGCCTTCTAAGAGGAGATTCTGAAGATGGAGATGTACTG
CTCATCCGAAACACATGACGAGAATGAACGTTATGGTTTGAAACATCATC
AGCTTCAACTCCATCATTTTCACCAGCAAGATTAGCATCCAAGCCCATCC
GAGGAGTGACAAGCCTCGTCATTGACCCTGAGTCATTTGTGGTTTCCACT
TGAAGTGGAACGGCTGGACGATTCACTGTACCTTGTGTGCCATTTCTTCT
CTTCAACTCCTCCTCTGCATTCAAGATCTGCTTTAGTACTTGTACTAAAC
TATGCTTTTTTGCATTCAAAACCTGTAATTTCTCCTCAACATCCCTTTTC
CTTTTTTCTTTTCCATTGAAATCATTTATTTTATCGCTTACCTCTACATT
TGTTTTAGCCTCCTCAGGCGGCTTCTCATCCACTTGCAAATTGATATCTT
TCTCGGTCTGCTCATCTTCCGACTTCACCAAACAACCTCCACCGTCGGAT
CCTCCAACTATGTCCACCTTGACCTCCTGGAGAGGTGGTCCAGTTTTCAA
ACCCTCGGACGGTTCAGGTTCCAGTTTGGCTTTCAATTTCGGCTCAATAG
GAGGCTCACAGGACACGGGAGATTGAATTTGATGCTTTAAAACAGAGTTA
GGGCTAGGGTTAGAAGAAGAAGAGGAACGGAGACGAGAGAGAGCTCTGTC
GCGGCGGTGCAAGAGAGATTTGAAGTCTTTGAGAGAGATTTTGGGAGTCG
GCATTAGCCAGCGCCAAGATACCTCCGGTGCTCTGTGGAGGTTCCCTCTG
TACAAAGAAATCGCCACCATTTTTGTGGCATAATCGAAAATAAAATTTTA
CGGTTATGGATATTATCTCAGGCTTTTCCGTAATAACCGCATTCAACAAA
CGACTGTTGCACGGCTTGCGAGAGCAAAT
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