g.arboreum_cottongen_reftransV1_0021276, g.arboreum_cottongen_reftransV1_0021276 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0021276
Unique Nameg.arboreum_cottongen_reftransV1_0021276
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length957
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr11chromosomeg.arboreum_cottongen_reftransV1_0021276:1..957 .
Chr11:56984817..56986117 +
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy TrEMBL
Match: A5BHI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011681 PE=4 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 1.259e-87
Identity = 124/186 (66.67%), Postives = 163/186 (87.63%), Query Frame = -1
Query:  340 IIQNLRQKRIFLEKSGARCIVMPCHISNAWHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPREDPLLKKCMDPMDALARTTIKWAKSAKKVHRKT 897
            I++NLR KR FLE+SGARCIVMPCH+++AWH E+S+ C LPF H+G+CVA ELK+AK KP++AGS+VRIGVL+  ET+    YQ+KLQ+QGFEVVLPD  TMEHI++PA+E+ +++D+EGARNLLRIA+ + L+RAVN+VILASDE+Q++LPR+DPL KKC++PMDALAR+TI WAKS ++VHRK 
Sbjct:  139 IVENLRCKRAFLEQSGARCIVMPCHLAHAWHSEVSKGCPLPFLHVGECVASELKKAKFKPLEAGSNVRIGVLAPGETLMAGFYQEKLQSQGFEVVLPDMATMEHIVVPAIEALHRKDMEGARNLLRIAVHIFLMRAVNIVILASDEMQDLLPRDDPLSKKCINPMDALARSTIGWAKSIEEVHRKA 324          
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy TrEMBL
Match: A0A067KJD4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13300 PE=4 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 6.954e-87
Identity = 125/182 (68.68%), Postives = 158/182 (86.81%), Query Frame = -1
Query:  352 IIQNLRQKRIFLEKSGARCIVMPCHISNAWHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPREDPLLKKCMDPMDALARTTIKWAKSAKKV 897
            +I+NL+ KR FLE SGA C+V+PCH+S+AWH +IS+ CLLPFFH+G+CVA EL+EAKLKP++AGS VRIG+L++  T+    YQ+KLQNQGFEVVLPDK TM+HIL+PAVE+  +RDIEGARNLLR+AIQ+LL+RA N VILASDEL+ +LPR++PLLKKC+DPMD+LAR TI+WAK   KV
Sbjct:  147 VIENLQSKRKFLELSGACCLVLPCHVSHAWHGKISQGCLLPFFHVGECVASELQEAKLKPLEAGSDVRIGILASNATLTAGFYQEKLQNQGFEVVLPDKATMDHILIPAVEALTRRDIEGARNLLRVAIQILLMRAANTVILASDELRGLLPRDEPLLKKCIDPMDSLARATIRWAKHESKV 328          
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy TrEMBL
Match: M5VR23_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008759mg PE=4 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 1.098e-86
Identity = 127/179 (70.95%), Postives = 158/179 (88.27%), Query Frame = -1
Query:  361 IIQNLRQKRIFLEKSGARCIVMPCHISNAWHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPREDPLLKKCMDPMDALARTTIKWAKSA 897
            II++L +KR FLE SGARCIVMPCH+S+AWHD+ISE C L F H+G+CVAREL+EAKLKP++ GS+VRIGVL+   T+    YQ+KLQ+QGFEVV+PDKETMEH+++PAVE+  +RD+EGARNLLRIA+QVLL+RAVN VI+ASDELQ +LPR+DPLLKKC+DPMDALAR+TIKWA + 
Sbjct:  138 IIESLCRKRAFLEHSGARCIVMPCHLSHAWHDQISEDCSLLFLHVGECVARELREAKLKPLENGSNVRIGVLAADATLMAGFYQEKLQSQGFEVVVPDKETMEHVVIPAVEAMKRRDMEGARNLLRIAVQVLLVRAVNTVIIASDELQGVLPRDDPLLKKCIDPMDALARSTIKWANAT 316          
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy TrEMBL
Match: B9RV29_RICCO (Racemase and epimerase, acting on amino acids and derivatives, putative OS=Ricinus communis GN=RCOM_0898340 PE=4 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 2.705e-86
Identity = 121/181 (66.85%), Postives = 160/181 (88.40%), Query Frame = -1
Query:  355 IIQNLRQKRIFLEKSGARCIVMPCHISNAWHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPREDPLLKKCMDPMDALARTTIKWAKSAKK 897
            I++NLR KR+FLE+SGARCIVMPCHIS++WH+++S+ C + F H+G+CVARELKEAKLKP++AGS +RIGVL+   T+    YQ+KLQ++GFEVVLPDK TMEH ++PA+ + N++D+EGARNLLRIA+QVLL+RAVN VILASD+++++LP+ DPLLKKC+DPMDAL R TIKWAK+A+K
Sbjct:  148 IVENLRSKRVFLERSGARCIVMPCHISHSWHEQVSKGCSIHFLHMGECVARELKEAKLKPLEAGSPLRIGVLAANATLTAGFYQEKLQSEGFEVVLPDKATMEHTIIPAIGALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMRDLLPQNDPLLKKCIDPMDALVRATIKWAKAAEK 328          
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy TrEMBL
Match: B9GWD2_POPTR (Aspartate-glutamate racemase family protein OS=Populus trichocarpa GN=POPTR_0003s06030g PE=4 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 3.620e-86
Identity = 124/192 (64.58%), Postives = 166/192 (86.46%), Query Frame = -1
Query:  355 HSSEVNGEH-IIIQNLRQKRIFLEKSGARCIVMPCHISNAWHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPREDPLLKKCMDPMDALARTTIKWAKSAKK 927
            H+ +   +H  I +NL+ KR+FLEKSG +CIVMPCHI ++WHDE+S+ C LPF H+G+CVARELKEAKLKP++AGS +RIG+L++  T+A   YQ+KLQN+GFEVVLPDK TMEH ++PA+E+ ++ D+EGA+NLLRIA+QVLL+RAVN VILAS+E++++LP +DPLLKKC+DPMDALAR+TIKWA++A K
Sbjct:  137 HNEKSPSDHSAIAENLQNKRVFLEKSGVQCIVMPCHILHSWHDEVSKGCSLPFLHMGECVARELKEAKLKPLEAGSPLRIGLLASNATLAAGFYQEKLQNEGFEVVLPDKATMEHTIIPAIEALDRNDMEGAQNLLRIALQVLLVRAVNTVILASEEMRDVLPEDDPLLKKCIDPMDALARSTIKWAQAADK 328          
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy TrEMBL
Match: A5AFE5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015733 PE=4 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 9.457e-86
Identity = 122/181 (67.40%), Postives = 156/181 (86.19%), Query Frame = -1
Query:  355 IIQNLRQKRIFLEKSGARCIVMPCHISNAWHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPREDPLLKKCMDPMDALARTTIKWAKSAKK 897
            I+ NL+ KR FLE+SG +CIVMPCHIS++WHDEIS    +PF H+G+CVARELK AKLKP++AGS +RIGVL+T  T+    YQ+KLQ +GFEVVLPDK TMEH ++PA+E+ N++D+EGARNLLRIA+QVLL+RAVN VILASD++ ++LPR+DPLLKKC+DPMDALAR+TI WA+S +K
Sbjct:  148 IVGNLQSKRAFLERSGVQCIVMPCHISHSWHDEISRGXSVPFLHMGECVARELKNAKLKPLEAGSPLRIGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPMDALARSTIHWAQSVEK 328          
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy TrEMBL
Match: A0A067KLJ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06172 PE=4 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 3.399e-84
Identity = 119/181 (65.75%), Postives = 161/181 (88.95%), Query Frame = -1
Query:  355 IIQNLRQKRIFLEKSGARCIVMPCHISNAWHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPREDPLLKKCMDPMDALARTTIKWAKSAKK 897
            I++NLR KR+FLE+SGARCIVMPCHIS++WHDE S+ C + F H+G+CVARELKEAKLKP++AGS +RIG+L+T   ++   YQ+KLQ++GFEVVLPDK TM+H ++PA++  N++DIEGARNLLRIA+Q LL+RAVN+VILASD++ ++LP++DPLLKKC+DP+DALAR+TIKWA++A+ 
Sbjct:  142 IVENLRGKRVFLERSGARCIVMPCHISHSWHDEASKGCSVHFLHMGECVARELKEAKLKPLEAGSPLRIGLLATNAILSAGFYQEKLQSEGFEVVLPDKATMDHTVIPAIDPLNRKDIEGARNLLRIALQFLLVRAVNIVILASDDIIDLLPQDDPLLKKCIDPIDALARSTIKWAEAAEN 322          
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy TrEMBL
Match: A0A059AK76_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03052 PE=4 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 1.971e-83
Identity = 118/182 (64.84%), Postives = 159/182 (87.36%), Query Frame = -1
Query:  355 IIIQNLRQKRIFLEKSGARCIVMPCHISNAWHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPREDPLLKKCMDPMDALARTTIKWAKSAKK 900
            +I+ NLRQKR+FLEKSGARCIVMPCHIS++WHD+IS  C + F ++ +CVA+EL E K+KP++AGS +RIGVL+T   +    YQ+KL+N+GFEVVLPDK TM+H ++PA+E+ N+ D+EGARNLLRIA+QVLL+RAVN V+LASD+L++ILP++DPLLKKC+DP+DALAR+TIKWAK+ ++
Sbjct:  152 LIVDNLRQKRVFLEKSGARCIVMPCHISHSWHDDISHGCPVSFLNMAECVAKELSEMKMKPLEAGSPLRIGVLTTSAILEAGFYQEKLENEGFEVVLPDKATMDHTIVPAIEASNRDDMEGARNLLRIALQVLLVRAVNTVVLASDDLRDILPQDDPLLKKCIDPVDALARSTIKWAKAVER 333          
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy TrEMBL
Match: A0A0A0KVD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004850 PE=4 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 6.148e-83
Identity = 123/202 (60.89%), Postives = 165/202 (81.68%), Query Frame = -1
Query:  358 LDGGRRPV--HSSEVNG--EHIIIQNLRQKRIFLEKSGARCIVMPCHISNAWHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPREDPLLKKCMDPMDALARTTIKWAKSAK 951
             D    PV  + SE  G    +++++L+ KR FLE SGARCIVMPCHIS+ W++++S+ C + F H+ DCVARELKEAKLKP++AGS +RIGVL+T   ++   YQ+KLQN+GFEVVLPDK TMEH ++PA+E+ N++DIEGARNLLRIA+QVLL+RAVN VILASD++++ILP +DPLL++C+DPMDALAR+TI WA+ A+
Sbjct:  126 FDKSSHPVLNYKSEDLGLDSELVVESLKSKRTFLENSGARCIVMPCHISHLWYEDVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDILPLDDPLLRRCIDPMDALARSTINWAQCAE 327          
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy TrEMBL
Match: A0A061GAR1_THECC (Aspartate-glutamate racemase family OS=Theobroma cacao GN=TCM_028296 PE=4 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 6.454e-83
Identity = 120/179 (67.04%), Postives = 158/179 (88.27%), Query Frame = -1
Query:  361 IIQNLRQKRIFLEKSGARCIVMPCHISNAWHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPREDPLLKKCMDPMDALARTTIKWAKSA 897
            I++NL  KR+FLEKSGA CIV+PCHIS++WHDE+ + C +P  H+G+CVARELKEAKLKP++ GS +RIGVL+T  T+    YQ+KLQN+GFEVVLPDK TMEH ++PA+++ N++D+EGARNLLRIA+QVLL+RAVN VILASD+++++LPR+DPL+KKC+DPMDALAR+TIKWA+ A
Sbjct:  230 IVENLWSKRVFLEKSGAHCIVVPCHISHSWHDEVFKGCSVPSLHMGECVARELKEAKLKPLETGSPLRIGVLATDATLKEGFYQEKLQNEGFEVVLPDKATMEHTVIPAIDALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMRDLLPRDDPLVKKCIDPMDALARSTIKWAQQA 408          
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy Swiss-Prot
Match: RACD_PYRHO (Aspartate racemase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH0670 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.411e-13
Identity = 42/165 (25.45%), Postives = 84/165 (50.91%), Query Frame = -1
Query:  370 LEKSGARCIVMPCHISNAWHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPREDPLLKKCMDPMDALARTTIKWA 864
            LE+ GA  I+MPC+ ++A+ ++I ++  +P   + +  A+++KE   K        + G+L+T  TI    Y+++    G E++ P ++  + ++    E     +++  R LL    ++L  R    +I    E+  +L ++D L    +DPMD +A   +K A
Sbjct:   70 LEECGADFIIMPCNTAHAFVEDIRKAIKIPIISMIEETAKKVKELGFK--------KAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEGVKAGNLKLGRELLLKTAKILEERGAECIIAGCTEVSVVL-KQDDLKVPLIDPMDVIAEVAVKVA 225          
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy Swiss-Prot
Match: RACD_THEK8 (Aspartate racemase OS=Thermococcus sp. (strain KS-8) PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 3.086e-9
Identity = 43/165 (26.06%), Postives = 78/165 (47.27%), Query Frame = -1
Query:  370 LEKSGARCIVMPCHISNAWHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPREDPLLKKCMDPMDALARTTIKWA 864
            LE+ GA  I+MPC+ ++ +   I  S + P   + +  A+ ++E  L+        ++G+L+T  TI    Y + L  +G  + +P+K+    ++    E     ++E  R LL + +   L R    +I    E+  +L   D L    +DPMD +A   +K A
Sbjct:   72 LEECGADFIIMPCNTAHFFAGTIQSSVIYPLVSMIEETAKRIEEMGLR--------KVGLLATDGTIKGMVYHRALLKRGIHIAVPNKKDQGLVMKAIYEGVKAGNLELGRELL-LKVAKKLERRSEGIIAGCTEVSVVLKPGD-LTVPLIDPMDVIAERAVKLA 226          
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy Swiss-Prot
Match: YPNL_PECCC (Uncharacterized protein in pnlA 3'region (Fragment) OS=Pectobacterium carotovorum subsp. carotovorum PE=3 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 2.027e-7
Identity = 39/149 (26.17%), Postives = 68/149 (45.64%), Query Frame = -1
Query:  373 WHDEISESCLLPFFHIGDCVARELKEAKLKPMDAGSSVRIGVLSTCETIAVAPYQQKLQNQGFEVVLPDKETMEHILMPAVESWNQRDIEGARNLLRIAIQVLLIRAVNVVILASDELQNILPRE---DPLLKKCMDPMDALARTTIKW 810
            W +++ + C      I D   + +K A        ++ R+G+L+T  T+    YQ  L     +   PD +  +H +M ++ ++   DI GA +LL      LL   V  +IL   EL  IL +E    P  +  +D  + L + T++W
Sbjct:    1 WFNDLKQQCRAEMISIIDVTCQAIKHA--------NTTRVGLLATTATVKARIYQDNLITDNIDCYTPD-DADQHQVMESIYAYKSGDIAGAYSLLSPVKDRLLQAGVEKIILGCTELPLILEQEVRTSP--QHYVDATEELIKKTVEW 138          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A5BHI0_VITVI1.259e-8766.67Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A067KJD4_JATCU6.954e-8768.68Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
M5VR23_PRUPE1.098e-8670.95Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9RV29_RICCO2.705e-8666.85Racemase and epimerase, acting on amino acids and ... [more]
B9GWD2_POPTR3.620e-8664.58Aspartate-glutamate racemase family protein OS=Pop... [more]
A5AFE5_VITVI9.457e-8667.40Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A067KLJ5_JATCU3.399e-8465.75Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A059AK76_EUCGR1.971e-8364.84Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A0A0KVD7_CUCSA6.148e-8360.89Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
A0A061GAR1_THECC6.454e-8367.04Aspartate-glutamate racemase family OS=Theobroma c... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0021276 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
RACD_PYRHO9.411e-1325.45Aspartate racemase OS=Pyrococcus horikoshii (strai... [more]
RACD_THEK83.086e-926.06Aspartate racemase OS=Thermococcus sp. (strain KS-... [more]
YPNL_PECCC2.027e-726.17Uncharacterized protein in pnlA 3'region (Fragment... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001920Asp/Glu racemaseGENE3D3.40.50.1860coord: 1..55
e-value: 1.2E-15
score: 57.7
IPR001920Asp/Glu racemaseGENE3D3.40.50.1860coord: 59..152
e-value: 7.8E-14
score: 51.5
IPR001920Asp/Glu racemaseSUPERFAMILY53681Aspartate/glutamate racemasecoord: 64..172
IPR001920Asp/Glu racemaseSUPERFAMILY53681Aspartate/glutamate racemasecoord: 4..51
IPR015942Asp/Glu/hydantoin racemasePFAMPF01177Asp_Glu_racecoord: 3..168
e-value: 1.8E-24
score: 86.7
NoneNo IPR availablePANTHERPTHR21198GLUTAMATE RACEMASEcoord: 1..181
NoneNo IPR availablePANTHERPTHR21198:SF7ASPARTATE-GLUTAMATE RACEMASE-LIKE PROTEINcoord: 1..181

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0021276 ID=g.arboreum_cottongen_reftransV1_0021276; Name=g.arboreum_cottongen_reftransV1_0021276; organism=Gossypium arboreum; type=contig; length=957bp
GGCGACTTGAGATGGCATCTTTTAAACATATTTCAACACGAATTGTGTTG
AATATGAAGAACATCTACTTTACAAAAATTTCATATCATCAAATGCAAAT
TAAGCCTCTGTCCCTTTTCTGTCTTTTCTTTGTATACATTCATACAGTGA
TCATTTAATTTGCTTCTAACATTATCGGTTCAGCCTTATCTTATTTGGTA
CTGTTGTTGTTGCTGTGTAAGCCTTGTCTATTTTTTTTTATTGACACCAT
AGTATGAACAAGATGTTGTGCACTTTCGATAGGCAAATATACCCTTACAA
GTTACAAGACAGCAAGAGTTTCCATGCTTGTATAGTTCAAGTTTTCCTAT
GTACCTTCTTTGCAGATTTAGCCCATTTTATAGTTGTTCTGGCTAAAGCA
TCCATGGGATCCATACATTTTTTAAGAAGAGGATCCTCTCGAGGTAAAAT
GTTCTGTAGTTCATCCGAAGCAAGGATGACAACATTCACAGCTCTAATTA
AAAGAACCTGGATTGCAATTCTCAGCAAGTTTCGAGCCCCTTCTATGTCC
CTTTGGTTCCATGATTCAACTGCTGGCATTAGAATATGTTCCATCGTTTC
CTTGTCTGGCAAAACCACTTCAAAACCCTGATTCTGTAATTTTTGTTGAT
ATGGAGCAACAGCTATGGTTTCACATGTGGAAAGTACCCCAATTCGAACA
CTGCTCCCAGCATCCATTGGCTTCAATTTCGCTTCCTTGAGCTCCCTGGC
AACACAGTCACCGATGTGAAAAAAGGGCAGTAAGCAGCTCTCAGATATCT
CATCATGCCATGCATTTGAGATATGGCATGGCATCACAATGCAACGAGCT
CCAGATTTCTCGAGAAATATTCTTTTCTGCCTCAGATTCTGGATGATAAT
ATGTTCACCATTTACTTCCGATGAATGAACCGGACGGCGGCCGCCGTCTA
GGGCCGG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001920Asp/Glu_race
IPR015942Asp/Glu/hydantoin_racemase
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006807nitrogen compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016855racemase and epimerase activity, acting on amino acids and derivatives
GO:0036361racemase activity, acting on amino acids and derivatives