g.arboreum_cottongen_reftransV1_0016974, g.arboreum_cottongen_reftransV1_0016974 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0016974
Unique Nameg.arboreum_cottongen_reftransV1_0016974
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1985
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr8chromosomeg.arboreum_cottongen_reftransV1_0016974:1..1985 .
Chr8:59385860..59387844 +
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy TrEMBL
Match: W9QJP6_9ROSA (Putative polyamine oxidase 5 OS=Morus notabilis GN=L484_027274 PE=4 SV=1)

HSP 1 Score: 697.197 bits (1798), Expect = 0.000e+0
Identity = 386/581 (66.44%), Postives = 445/581 (76.59%), Query Frame = 2
Query:  119 MAKKPRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFSGEPK---TIAEGGFELNASIVDPISTLFKNLMDFAQGKLTEDSAGSGGDACYYNFAAKAALKDCTSNGGFGNQSVGAFLRRGLGAYWDSC-KDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDS-----------RPVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGN--VESCDDNG---VRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDS-DHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHYRCVGV 1798
            +AKKPRIVIIGAGMAGLTAANKL+TS      FELVVVEGG RIGGRINTSEF GDRIEMGATWIHGIGGSPVH+IAREIHAL SD+PWECMDG S +P    T+AEGGFEL+ S+V+P+STLFK+LMD+AQ K  + +        YY  A K++    ++NG     SVG+FLR+GL  YW S  K+ EE+ GYG W+RK LEE VF +HENTQRTYTSAGDLF LDY  ESEYRM  GEEITI+KGYLSIIE+LAS LPPG++QLG+KV +IEWQ E +    + NGY S           RPVKI FCDGS+M+ADHVIVTVSLGVLK+G  +   MFNPPLP FKTEAI RLG+GVVNKLF+Q + N N     K  FP LQ+VF   +SELR EK+P WMR+TAS+ PIY NS+VLLSWFAGKEALELE+L DEEII GVSAT+S  L  +K H  DK      CNGN  +E  + N    V+  KVLKS+WG+DPLFLGSYSYVAVGSSG DLD MAEPLP++GS +S +  PLQ+LFAGEATHRTHYSTTHGAYFSGLREANRLL+HY CVGV
Sbjct:    2 VAKKPRIVIIGAGMAGLTAANKLHTSCSPAAAFELVVVEGGSRIGGRINTSEFGGDRIEMGATWIHGIGGSPVHEIAREIHALSSDQPWECMDGSSEDPARFTTVAEGGFELDRSLVEPVSTLFKSLMDYAQKKTVDHND-------YYKIACKSSNVFPSTNGSL---SVGSFLRKGLELYWGSKEKEEEEVLGYGNWNRKSLEEGVFRVHENTQRTYTSAGDLFTLDYVTESEYRMCSGEEITIAKGYLSIIEYLASALPPGLVQLGKKVKQIEWQIEKNG---LENGYGSSDNDSEYNDSNRPVKIHFCDGSTMVADHVIVTVSLGVLKAGVQESGNMFNPPLPCFKTEAIQRLGFGVVNKLFVQLNNNNNNNNKSKNDFPFLQMVFRKADSELREEKVPWWMRKTASMFPIYENSNVLLSWFAGKEALELESLRDEEIIGGVSATISSFL--AKPH--DKL----LCNGNGSLEEEEKNKWYEVKVKKVLKSQWGNDPLFLGSYSYVAVGSSGDDLDRMAEPLPRIGSHESANSPPLQLLFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGV 561          
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy TrEMBL
Match: V7CBE3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G136900g PE=4 SV=1)

HSP 1 Score: 693.73 bits (1789), Expect = 0.000e+0
Identity = 371/562 (66.01%), Postives = 427/562 (75.98%), Query Frame = 2
Query:  122 AKKPRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFSGEPKTIAEGGFELNASIVDPISTLFKNLMDFAQGKLTEDSAGSGGDACYYNFAAKAALKDCTSNGGFGNQSVGAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDS---GMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVE----SCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKL-GSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHY 1783
             KK RIVIIGAGMAGLTAANKL++ + S  LFE+ VVEGG+RIGGRINTSEF GDRIEMGATWIHGI GSP+H+IA++IHALESD+PWECMDG   +  TIAEGGF LN S V PI+ LF NLMD AQGK++  +  + GD+                    GN SVG+FLR+GL AYW S K+ +EL G+GKWSRKLL+EA+FAMHENTQRT TS  DL  LDY AESEY+MFPGEEITI+KGY +IIE LASVLPPG++QLGRKVTRIEWQPE H+++ + NG  SRPV + F DGS M ADHVIVTVSLGVLK+    D     MF+PPLP+FK EAISRLG+GVVNKLF+Q SP   R       FP LQ+VFH  +SEL+H+KIP WMRRTA+L PIYNNSSVLLSWFAG+EAL +E+L +EEI  GVS T+S  L            S EFCNGNV+    S  +  V+F KVLKS+WG+DPLFLGSYS+VAVGSSG D DTMAEPLPK   S  S   PLQILFAGEATHRTHYSTTHGAYFSGLREANRLL+HY
Sbjct:    3 VKKARIVIIGAGMAGLTAANKLHSVSVSKSLFEVCVVEGGNRIGGRINTSEFGGDRIEMGATWIHGIEGSPIHKIAQQIHALESDQPWECMDGNENKTTTIAEGGFVLNPSFVHPITKLFNNLMDHAQGKMSTATTTNKGDS--------------------GNLSVGSFLRQGLDAYWGSSKEEKELKGFGKWSRKLLDEAIFAMHENTQRTCTSVADLLTLDYGAESEYQMFPGEEITIAKGYSNIIESLASVLPPGLVQLGRKVTRIEWQPERHEAMNMENGTCSRPVVLHFSDGSIMSADHVIVTVSLGVLKASIHDDDSGMSMFHPPLPSFKAEAISRLGFGVVNKLFMQLSPPHGRRDEHSRGFPFLQMVFHSHQSELKHKKIPWWMRRTATLCPIYNNSSVLLSWFAGEEALAIESLKEEEISKGVSDTISCFLS----------RSVEFCNGNVKSEKHSSHEYKVKFSKVLKSEWGTDPLFLGSYSHVAVGSSGDDFDTMAEPLPKCSSSHPSASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHY 534          
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy TrEMBL
Match: A0A0B2QXT4_GLYSO (Putative polyamine oxidase 5 OS=Glycine soja GN=glysoja_032252 PE=4 SV=1)

HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0
Identity = 394/579 (68.05%), Postives = 445/579 (76.86%), Query Frame = 2
Query:  119 MAKKPRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFSGEPKTIAEGGFELNASIVDPISTLFKNLMDFAQGK--LTEDSAGSGGDACYYNFAAKAALKDCTSNGGFGNQ--SVGAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSI-QVPNG-YDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSG---TGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSP------NGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCD----DNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTD--SDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHYRCV 1792
            + KKPRIVIIGAGMAGLTAA KLYT+T S  LFEL VVEGG RIGGRINTSEF GDRIEMGATWIHGIGGSP+H+IA+EIH+L SD+PWECMDG + E  TIAEGGF L+ SIVDPI+ LF  LM+++QGK  LTE ++       Y+  AA AA     S   + N   SVG+FLR+GL AY  S K++EE+ G G WSRKLLEEA+FAMHEN QRTYTSA DL  LDY AESEYRMFPGEEITI+KGYLSIIE LASVLPPG +QLGRKVTRIEWQ +  K    V NG   SRPVK+ FCDGS M ADHVIVTVSLGVLK+       DSGMF PPLP  KTEAISRLG+GVVNKLF+Q SP      +GN  +N  + FP LQ+VFH P+SE+ H+KIP WMRRTA+L PIYNNSSVLLSWF G+EAL LE+L DEEIINGVS+TVS  L  S+  K    +S + CNGNV S +     N V+F KV+KSKWG+DPLFLGSYSYVAVGSSG DLDTMAEPLPK  S    +   PLQILFAGEATHRTHYSTTHGAYFSGLREANRLL+HY  +
Sbjct:    2 VVKKPRIVIIGAGMAGLTAA-KLYTATASKDLFELCVVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQEIHSLHSDQPWECMDGNTDEAITIAEGGFHLHPSIVDPITKLFNTLMEYSQGKKTLTEATSKGAELESYHKLAALAAKLASASASAYNNNNLSVGSFLRQGLEAYQVS-KEQEEVKGCGNWSRKLLEEAIFAMHENNQRTYTSADDLLTLDYGAESEYRMFPGEEITIAKGYLSIIESLASVLPPGFVQLGRKVTRIEWQLDDEKRKGAVENGCCSSRPVKLHFCDGSVMSADHVIVTVSLGVLKAAISDDDDDSGMFCPPLPPSKTEAISRLGFGVVNKLFMQLSPTHGEGKHGNEHSN--KGFPFLQMVFHSPQSEMGHKKIPWWMRRTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSCFLQHSQWQK-GSTSSHKLCNGNVNSEERSHHQNEVKFSKVMKSKWGTDPLFLGSYSYVAVGSSGDDLDTMAEPLPKDNSCQPPAASSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHWI 575          
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy TrEMBL
Match: I1L1H1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0
Identity = 390/599 (65.11%), Postives = 450/599 (75.13%), Query Frame = 2
Query:  119 MAKKPRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFS----GEPKTIAEGGFELN-ASIVDPISTLFKNLMDFAQGKLTEDSAGSGGD-ACYYNFAAKAALKDCTSNGGFGNQSV-GAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQ---VPNG----YDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSG----TGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSP-NGNRPANDKEK----FPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKE-----DKYNSPEFCNGNVESCD------DNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPK-----LGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHYRCVGV 1798
            + KKPRIVIIGAGMAGLTAANKLYT+T S  LFEL VVEGG RIGGRINTSEF GDRIEMGATWIHGIGGSP+H+IA+EIH+L SD+PWECMDG +        TIAEGGF L+  SIVDPI+ LF  LM+++QGKL + ++  G +   Y   AAK A    +SN    N    G+FLR+GL AY  S +++EE+ G G WSRKLLEEA+FAMHEN QRTYTSA DLF LDY AESEY MFPGEEITI+KGYLSIIE+LASVLPPG++QLG+KVTRIEWQ +  K  +   V N       SRPVK+ FCDGS M ADHVIVTVSLGVLK+        DSGMF PPLP  KTEAISRLG+GVVNKLF+Q SP +G    ++ E+    FP LQ+ FH P+SE+R++KIP WMRRTA+L PIYNNSSVLLSWF G+EAL LE+L DEEIINGVS+TVS  L   +HH +        +S + CNGNV S +       N V+F KVLKSKWG+DPLFLGSYSYVAVGSSG DLD MAEPLPK       S+ +   PLQILFAGEATHRTHYSTTHGAYFSGLREANRLL+HY CVG+
Sbjct:    2 VVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQEIHSLHSDQPWECMDGNTVTDDATTITIAEGGFHLHHPSIVDPITKLFNTLMEYSQGKLNDTTSKGGSELESYQKLAAKVASVSASSNNNNKNNLSVGSFLRQGLEAYQVSKEEQEEVKGCGNWSRKLLEEAIFAMHENNQRTYTSADDLFTLDYGAESEYIMFPGEEITIAKGYLSIIEYLASVLPPGLVQLGKKVTRIEWQLDDEKRKKGGAVENNGCCSSSSRPVKLHFCDGSVMYADHVIVTVSLGVLKAAILDDDDDDSGMFYPPLPPSKTEAISRLGFGVVNKLFMQLSPTHGGLKQHENEQSDKGFPFLQMAFHSPQSEMRNKKIPWWMRRTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSFFL---QHHSQWQKGSTSCSSHKLCNGNVNSDEGRSHYLQNEVKFSKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDIMAEPLPKDNSSCQASSAASSSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGI 597          
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy TrEMBL
Match: A0A0B2RTX6_GLYSO (Putative polyamine oxidase 5 OS=Glycine soja GN=glysoja_013268 PE=4 SV=1)

HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0
Identity = 390/599 (65.11%), Postives = 450/599 (75.13%), Query Frame = 2
Query:  119 MAKKPRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFS----GEPKTIAEGGFELN-ASIVDPISTLFKNLMDFAQGKLTEDSAGSGGD-ACYYNFAAKAALKDCTSNGGFGNQSV-GAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQ---VPNG----YDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSG----TGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSP-NGNRPANDKEK----FPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKE-----DKYNSPEFCNGNVESCD------DNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPK-----LGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHYRCVGV 1798
            + KKPRIVIIGAGMAGLTAANKLYT+T S  LFEL VVEGG RIGGRINTSEF GDRIEMGATWIHGIGGSP+H+IA+EIH+L SD+PWECMDG +        TIAEGGF L+  SIVDPI+ LF  LM+++QGKL + ++  G +   Y   AAK A    +SN    N    G+FLR+GL AY  S +++EE+ G G WSRKLLEEA+FAMHEN QRTYTSA DLF LDY AESEY MFPGEEITI+KGYLSIIE+LASVLPPG++QLG+KVTRIEWQ +  K  +   V N       SRPVK+ FCDGS M ADHVIVTVSLGVLK+        DSGMF PPLP  KTEAISRLG+GVVNKLF+Q SP +G    ++ E+    FP LQ+ FH P+SE+R++KIP WMRRTA+L PIYNNSSVLLSWF G+EAL LE+L DEEIINGVS+TVS  L   +HH +        +S + CNGNV S +       N V+F KVLKSKWG+DPLFLGSYSYVAVGSSG DLD MAEPLPK       S+ +   PLQILFAGEATHRTHYSTTHGAYFSGLREANRLL+HY CVG+
Sbjct:    2 VVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQEIHSLHSDQPWECMDGNTVTDDATTITIAEGGFHLHHPSIVDPITKLFNTLMEYSQGKLNDTTSKGGSELESYQKLAAKVASVSASSNNNNKNNLSVGSFLRQGLEAYQVSKEEQEEVKGCGNWSRKLLEEAIFAMHENNQRTYTSADDLFTLDYGAESEYIMFPGEEITIAKGYLSIIEYLASVLPPGLVQLGKKVTRIEWQLDDEKRKKGGAVENNGCCSSSSRPVKLHFCDGSVMYADHVIVTVSLGVLKAAILDDDDDDSGMFYPPLPPSKTEAISRLGFGVVNKLFMQLSPTHGGLKQHENEQSDKGFPFLQMAFHSPQSEMRNKKIPWWMRRTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSFFL---QHHSQWQKGSTSCSSHKLCNGNVNSDEGRSHYLQNEVKFSKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDIMAEPLPKDNSSCQASSAASSSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGI 597          
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: LSDA_DROME (Possible lysine-specific histone demethylase 1 OS=Drosophila melanogaster GN=Su(var)3-3 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.275e-17
Identity = 105/335 (31.34%), Postives = 154/335 (45.97%), Query Frame = 2
Query:  821 FPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSRPVKIEFCDGSSML---ADHVIVTVSLGVLKSGTGQ------DSGMFNPPLPTFKTEAISRLGYGVVNKLFLQ-----WSPNGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHY 1783
            F G   T+  GY  +   L   L    I++   V  I++   G K ++V        V       +S +   AD V+ T++LGVLK           ++  F+PPLP +K +AI RLG+G +NK+ L      W PN N   +      S            R E    W     S+S    +S VLL+  AG  A  +E+++D+ II    + +  +                F N +V    +  V       ++W SDP   GSYSYV+VGSSG+D D +A P+    S D++  P ++ FAGE T R + +T HGAY SGLREA R+  +Y
Sbjct:  553 FIGHHTTVRNGYSCVPVALTENLD---IRVNSAVKEIKY---GTKGVEV--------VAENLKTSNSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTAS------------RGEMFLFW-----SIS----SSPVLLALVAGMAANLVESVTDDIIIGRCMSVLKNI----------------FGNTSVPQPKETVV-------TRWRSDPWARGSYSYVSVGSSGSDYDLLAAPVIPPSSKDAEGLP-RLFFAGEHTIRNYPATVHGAYLSGLREAGRIADYY 828          
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: KDM1B_HUMAN (Lysine-specific histone demethylase 1B OS=Homo sapiens GN=KDM1B PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 3.674e-17
Identity = 130/538 (24.16%), Postives = 209/538 (38.85%), Query Frame = 2
Query:  215 FELVVVEGGDRIGGRI-NTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFSGEPKTIAEGGFELNASIVDPISTLFKNLMDFA------QGKLTEDSAGSGGDACYYNFAAKAALKDCTSNGGFGNQSVGAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQ-----WSPN-------GNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRL 1771
             ++ V+E  DRIGGR+ +   F G  +  GA  ++G   +PV        AL  ++    M  F      I EGG   + +I   +   F  L+D        + +L +   G   +  Y  F  ++ ++         ++  G  L+  L     +C                       +H+ + R++           +    +  F G+   ++ GY  IIE LA  L    IQL   V  I+              Y    V++   DG+   A  V+VTV L +L+ G  Q    FNPPL   K +AI+ LG G++ K+ LQ     W          G+ P +  ++   L  VF+  + + +H                    SVL+S  AG+    + TL D++++    AT+  L       KE +   P                  K   ++W +DP    +YS+V  G SG   D +AE +              + FAGEAT+R    T  GAY SG+REA+++
Sbjct:  406 IKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPV--------ALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQ--------FSELEGQVLQFHLSNLEYACGSN--------------------LHQVSARSW-----------DHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLD---IQLKSPVQCID--------------YSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQ----FNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKR--GLFAVFYDMDPQKKH--------------------SVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELF------KEQEVPDPT-----------------KYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQG-----------TVFFAGEATNRHFPQTVTGAYLSGVREASKI 819          
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: PAO3_ARATH (Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO3 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.155e-14
Identity = 138/567 (24.34%), Postives = 222/567 (39.15%), Query Frame = 2
Query:  101 VEVETTMAKK--PRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFSGEPKTIAEGGFELNASIVDPISTLFKNLMDFAQGKLTEDSAGSGGDACYYNFAAKAALKDCTSNGGFGNQSVGAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREAN----RLLKHY 1783
            V  +  M KK  P +++IG GMAG++AA  L      D  F++VV+E  DRIGG          R+    ++     G PV   A  +H +  + P   + G  G P     G    N+ + D     +  L D A  +++++     G+   +       ++D         Q+     +R             EL   G      L   V   +      + +A D   +  +   +  + PG    + +GY  +I  L+  L    I+L  ++T+I  +  G              VK+    G + +AD  ++ + LGVLKSG       F P LP +K EAI+ LG G+ NK+ L +         D   +P+++ +    E+           + T+          VL+   AG+ A ++E  SDE   N   + +  +LP +        +SP                    L S+WGSD   LGSYSY  V       + +  PL  L             FAGEAT  ++  + HGAY +G+  A     R+L+ Y
Sbjct:   17 VSTDEKMKKKRSPSVIVIGGGMAGISAARTL-----QDASFQVVVLESRDRIGG----------RVHTDYSF-----GFPVDLGASWLHGVCKENPLAAVIGRLGLPLYRTSGD---NSVLYDHDLESYA-LFDKAGNQVSQELVTKVGENFEHILEEICKVRDEQDEDMSIAQAFSIVFKRN-----------PELRLEG------LAHNVLQWYLCRMEGWFAA-DAETISAKCWDQEELLPGGHGLMVRGYRPVINTLSKGLD---IRLSHRITKISRRYSG--------------VKVTTEKGDTFVADAAVIALPLGVLKSGMIT----FEPKLPQWKQEAINDLGVGIENKIILNF---------DNVFWPNVEFLGVVAETSYGCSYFLNLHKATS--------HPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDA--------SSPI-----------------NYLVSRWGSDINSLGSYSYDIVNKPHDLYERLRVPLDNL------------FFAGEATSSSYPGSVHGAYSTGVLAAEDCRMRVLERY 466          
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: LDL3_ARATH (Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana GN=LDL3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.133e-13
Identity = 98/336 (29.17%), Postives = 146/336 (43.45%), Query Frame = 2
Query:  812 YRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSR-PVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPANDKEKFPSLQIVF----------HPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHYR 1786
            Y  F G    I  GY  ++E LA  L    I L + V+ + +  +      V    +S+  V++   +G   L D V+VTV LG LK+ T +    F+PPLP +K  +I +LG+GV+NK+ L+              FP+   VF             E++LR E    W  +    +P      VL++   GK A E    S  E +N        ++ + K    D    P      V S           + + WG+DP   G+YSYVA+G+SG D D +  P+              + FAGEAT + H  T  GA  +G+REA R++   R
Sbjct:  841 YGGFGGPHAMIKGGYSRVVESLAEGLD---IHLNKIVSDVSYVSD------VSAMDNSKHKVRVSTSNGCEYLGDAVLVTVPLGCLKAETIK----FSPPLPDWKYASIKQLGFGVLNKVVLE--------------FPT---VFWDDSVDYFGATAEETDLRGECFMFWNVKKTVGAP------VLIALVVGKAAFEYTNKSKSEHVN------HAMMVLRKLFGGDLVPDP------VAS-----------VVTDWGTDPYSYGAYSYVAIGASGEDYDVLGRPVQNC-----------LFFAGEATCKEHPDTVGGAMMTGVREAVRIIDILR 1106          
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: KDM1B_MOUSE (Lysine-specific histone demethylase 1B OS=Mus musculus GN=Kdm1b PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 6.140e-13
Identity = 120/533 (22.51%), Postives = 204/533 (38.27%), Query Frame = 2
Query:  215 FELVVVEGGDRIGGRI-NTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFSGEPKTIAEGGFELNASIVDPISTLFKNLMDFA------QGKLTEDSAGSGGDACYYNFAAKAALKDCTSNGGFGNQSVGAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIY-------NNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRL 1771
             ++ V+E  DRIGGR+ +   F G  +  G   ++G   +PV        AL  ++    M         I EGG   + ++   +   F  L+D        +  L +   G   +  Y  F  ++ ++         ++  G  L+  L     +C                      ++H+ + R++           +    +  F G+   ++ GY +IIE LA  L    I+L   V  I+              Y    V++   DG    A  V+VTV L +L+ G  Q    FNPPL   K +AI+ LG G++ K+ LQ              FP     +   +S+++     G +  +AS   ++       +  SVL+S   G+    L T+ D++++      +  L       KE +   P                  K   ++W ++P    +YS+V    SG   D +AE +              + FAGEAT+R    T  GAY SG+REA+++
Sbjct:  412 MKVTVLEAKDRIGGRVWDDKSFKGVVVGRGPQIVNGCINNPV--------ALMCEQLGISMRKLGERCDLIQEGGRITDPTVDKRMDFHFNALLDVVSEWRKDKTLLQDVPLGEKIEEIYRAFVKESGIQ--------FSELEGQVLQFHLSNLEYACGS--------------------SLHQVSARSW-----------DHNEFFAQFAGDHTLLTPGYSTIIEKLAEGLD---IRLKSPVQSID--------------YTGDEVQVTTTDGMGHSAQKVLVTVPLAILQRGAIQ----FNPPLSEKKMKAINSLGAGIIEKIALQ--------------FP-----YRFWDSKVQGADFFGHVPPSASQRGLFAVFYDMDSQQSVLMSVITGEAVASLRTMDDKQVLQQCMGILRELF------KEQEIPEPT-----------------KYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAEEIQG-----------TVFFAGEATNRHFPQTVTGAYLSGVREASKI 823          
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: LDL2_ARATH (Lysine-specific histone demethylase 1 homolog 2 OS=Arabidopsis thaliana GN=LDL2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.438e-12
Identity = 85/265 (32.08%), Postives = 122/265 (46.04%), Query Frame = 2
Query:  998 IEFCDGSSML-ADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPA----NDKEKFPSLQIVFHPPESEL-RHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLL 1774
            +E   GS +  AD ++ TV LGVLK    + S  F P LP  K  AI RLG+G++NK+ + +      P+    ++ + F  L       ES + R E    +   T S  P       L++  AG+ A   E      +++ V   + G+         D   +   C                   ++WGSDPL  GSYS+V VGSSG D D +AE +             ++ FAGEAT R H +T HGAY SGLREA+++L
Sbjct:  384 VEVISGSQIFQADMILCTVPLGVLK----KRSIKFEPELPRRKQAAIDRLGFGLLNKVAMLF------PSVFWGDELDTFGCLN------ESSINRGEFFLFYAYHTVSGGP------ALVALVAGEAAQRFECTEPSVLLHRVLKKLRGIYGPKGVVVPDPIQT--VC-------------------TRWGSDPLSYGSYSHVRVGSSGVDYDILAESVSN-----------RLFFAGEATTRQHPATMHGAYLSGLREASKIL 594          
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: PAO2_ARATH (Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.789e-11
Identity = 89/331 (26.89%), Postives = 139/331 (41.99%), Query Frame = 2
Query:  770 AGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREA 1762
            A D   +  +   +  + PG    + +GY  +I  LA  L    I++G +VT+I         ++  NG     VK+   +G + +AD  ++ V LGVLKSGT +    F P LP +K EAI+ LG G+ NK+ L +         +K  +P ++ +    E+           + T           VL+   AG+ A ++E +SDE   N     +  +LP                         + +   + L S+WGSD   +GSYSY  VG      + +  P+  L             FAGEAT  +   + HGAY +GL  A
Sbjct:  199 AADAETISAKCWDQEELLPGGHGLMVRGYRPVINTLAKGLD---IRVGHRVTKI---------VRRYNG-----VKVTTENGQTFVADAAVIAVPLGVLKSGTIK----FEPKLPEWKQEAINDLGVGIENKIILHF---------EKVFWPKVEFLGVVAETSYGCSYFLNLHKATG--------HPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILP-------------------------DALPPVQYLVSRWGSDVNSMGSYSYDIVGKPHDLYERLRVPVDNL------------FFAGEATSSSFPGSVHGAYSTGLMAA 454          
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: PAO4_ARATH (Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 7.123e-9
Identity = 31/78 (39.74%), Postives = 51/78 (65.38%), Query Frame = 2
Query:  128 KPRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGG-SPVHQIAREI 358
            +P +++IG+G++GL AA  L     S+  F++ V+E  DRIGGRI+T    G  ++MGA+W+HG+   +P+  I R +
Sbjct:   28 QPSVIVIGSGISGLAAARNL-----SEASFKVTVLESRDRIGGRIHTDYSFGCPVDMGASWLHGVSDENPLAPIIRRL 100          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
W9QJP6_9ROSA0.000e+066.44Putative polyamine oxidase 5 OS=Morus notabilis GN... [more]
V7CBE3_PHAVU0.000e+066.01Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A0A0B2QXT4_GLYSO0.000e+068.05Putative polyamine oxidase 5 OS=Glycine soja GN=gl... [more]
I1L1H1_SOYBN0.000e+065.11Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
A0A0B2RTX6_GLYSO0.000e+065.11Putative polyamine oxidase 5 OS=Glycine soja GN=gl... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
LSDA_DROME3.275e-1731.34Possible lysine-specific histone demethylase 1 OS=... [more]
KDM1B_HUMAN3.674e-1724.16Lysine-specific histone demethylase 1B OS=Homo sap... [more]
PAO3_ARATH1.155e-1424.34Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO... [more]
LDL3_ARATH2.133e-1329.17Lysine-specific histone demethylase 1 homolog 3 OS... [more]
KDM1B_MOUSE6.140e-1322.51Lysine-specific histone demethylase 1B OS=Mus musc... [more]
LDL2_ARATH3.438e-1232.08Lysine-specific histone demethylase 1 homolog 2 OS... [more]
PAO2_ARATH4.789e-1126.89Probable polyamine oxidase 2 OS=Arabidopsis thalia... [more]
PAO4_ARATH7.123e-939.74Probable polyamine oxidase 4 OS=Arabidopsis thalia... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002937Amine oxidasePFAMPF01593Amino_oxidasecoord: 34..572
e-value: 6.0E-77
score: 259.7
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 20..110
e-value: 1.3E-65
score: 220.3
coord: 519..575
e-value: 1.3E-65
score: 220.3
coord: 261..380
e-value: 1.3E-65
score: 220.3
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 21..378
coord: 521..575
NoneNo IPR availablePANTHERPTHR10742:SF300SUBFAMILY NOT NAMEDcoord: 162..463
NoneNo IPR availablePANTHERPTHR10742:SF300SUBFAMILY NOT NAMEDcoord: 8..146
NoneNo IPR availablePANTHERPTHR10742AMINE OXIDASEcoord: 8..146
coord: 162..463
NoneNo IPR availablePANTHERPTHR10742AMINE OXIDASEcoord: 479..578
NoneNo IPR availablePANTHERPTHR10742:SF300SUBFAMILY NOT NAMEDcoord: 479..578
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..580
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.777
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 363..510

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0016974 ID=g.arboreum_cottongen_reftransV1_0016974; Name=g.arboreum_cottongen_reftransV1_0016974; organism=Gossypium arboreum; type=contig; length=1985bp
ACAGTTCTTCTTCACTCTTTCACTCCTCACACTCTGTGCTCTTTCTTTTG
TCCAAATCTTGTTCAAATTGTTGTTTCCTTTTGTATCTTTTCTGCTGCTA
GTTGAGGTGGAAACTACAATGGCAAAGAAGCCAAGAATTGTGATAATTGG
AGCTGGGATGGCTGGTCTTACTGCAGCTAACAAGCTCTATACTTCCACTG
GCTCCGACCATTTGTTTGAGCTTGTTGTTGTTGAAGGTGGTGATAGAATT
GGTGGCAGAATCAACACTTCGGAGTTTTGTGGTGACAGAATTGAGATGGG
TGCTACTTGGATCCATGGTATAGGAGGCAGCCCGGTACATCAAATTGCTC
GGGAAATCCATGCGCTTGAGTCTGATAAGCCATGGGAGTGTATGGATGGG
TTCTCGGGTGAGCCAAAGACTATTGCTGAAGGTGGGTTCGAGCTAAATGC
CTCCATCGTTGACCCCATATCCACCCTTTTCAAAAACCTGATGGATTTCG
CTCAAGGGAAGCTGACTGAAGACAGTGCAGGCAGCGGAGGAGATGCTTGT
TACTACAATTTTGCAGCTAAAGCAGCCTTGAAAGATTGTACGAGCAATGG
TGGCTTTGGTAACCAGAGTGTCGGTGCGTTTCTTAGACGAGGCCTTGGTG
CTTACTGGGATTCTTGCAAGGACCGTGAGGAGCTGAACGGATATGGTAAA
TGGAGCAGAAAATTGCTTGAAGAAGCCGTTTTTGCTATGCATGAAAACAC
CCAGAGAACTTATACTTCTGCCGGTGATCTGTTCAATCTAGATTACGAGG
CAGAAAGCGAGTACCGTATGTTTCCTGGTGAAGAAATCACCATTTCTAAA
GGCTATTTGAGCATAATTGAACATCTTGCATCTGTTCTTCCTCCTGGCGT
AATCCAATTAGGCCGCAAAGTCACAAGAATCGAATGGCAACCTGAGGGTC
ATAAATCAATACAAGTTCCAAATGGCTATGATTCCAGACCAGTGAAGATT
GAGTTTTGTGATGGATCTTCTATGTTAGCAGATCATGTGATAGTCACAGT
TTCATTAGGGGTCTTAAAATCTGGAACTGGTCAAGATTCGGGTATGTTCA
ATCCTCCCCTTCCTACTTTCAAGACAGAGGCTATATCAAGACTTGGATAT
GGAGTTGTTAACAAGCTGTTCCTTCAATGGAGTCCAAATGGTAATCGACC
CGCCAATGATAAAGAGAAGTTCCCTTCCTTGCAAATCGTTTTCCATCCCC
CAGAATCCGAGTTAAGGCATGAAAAGATCCCAGGGTGGATGAGGAGGACA
GCTTCACTGTCTCCTATTTATAACAATTCAAGCGTCCTCCTATCCTGGTT
TGCAGGTAAAGAAGCACTTGAGCTTGAAACACTTAGCGATGAAGAGATTA
TAAATGGAGTTTCAGCAACAGTATCTGGTTTATTACCAGTATCAAAACAC
CACAAGGAAGACAAGTATAATTCCCCTGAATTCTGCAATGGGAATGTGGA
GAGCTGTGATGACAATGGAGTGAGATTTGGTAAGGTTTTGAAGAGCAAAT
GGGGCAGTGATCCATTATTCTTGGGATCTTACAGCTACGTGGCTGTTGGA
TCAAGCGGTGCTGATTTAGACACAATGGCTGAACCCTTACCAAAGCTTGG
GAGCACTGACTCAGACCACCATCCACTTCAAATATTGTTTGCTGGGGAGG
CTACACACAGAACCCACTATTCTACAACCCATGGAGCTTATTTCAGTGGT
CTTAGGGAAGCCAATAGGCTTCTCAAACATTATCGTTGTGTTGGGGTTTA
GACTTAGCAATTTAATTTATTTTTGAAATACTCTATTTTCCTAAATCCTT
CTCATATTCTATCTATATAAAACCATCTTTGTTTTCTCTTTCTTTTAAGT
AAAGCGAAGAGTGAATGAGAGCAAAAGAGAAAAGAAAAAAAAGGGAGGGG
GGGTTAATGGGAAGATATAGATGGGGACATTTTTA
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002937Amino_oxidase
IPR023753FAD/NAD-binding_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114obsolete oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity