g.arboreum_cottongen_reftransV1_0016974, g.arboreum_cottongen_reftransV1_0016974 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy TrEMBL
Match: W9QJP6_9ROSA (Putative polyamine oxidase 5 OS=Morus notabilis GN=L484_027274 PE=4 SV=1) HSP 1 Score: 697.197 bits (1798), Expect = 0.000e+0 Identity = 386/581 (66.44%), Postives = 445/581 (76.59%), Query Frame = 2 Query: 119 MAKKPRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFSGEPK---TIAEGGFELNASIVDPISTLFKNLMDFAQGKLTEDSAGSGGDACYYNFAAKAALKDCTSNGGFGNQSVGAFLRRGLGAYWDSC-KDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDS-----------RPVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGN--VESCDDNG---VRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDS-DHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHYRCVGV 1798 +AKKPRIVIIGAGMAGLTAANKL+TS FELVVVEGG RIGGRINTSEF GDRIEMGATWIHGIGGSPVH+IAREIHAL SD+PWECMDG S +P T+AEGGFEL+ S+V+P+STLFK+LMD+AQ K + + YY A K++ ++NG SVG+FLR+GL YW S K+ EE+ GYG W+RK LEE VF +HENTQRTYTSAGDLF LDY ESEYRM GEEITI+KGYLSIIE+LAS LPPG++QLG+KV +IEWQ E + + NGY S RPVKI FCDGS+M+ADHVIVTVSLGVLK+G + MFNPPLP FKTEAI RLG+GVVNKLF+Q + N N K FP LQ+VF +SELR EK+P WMR+TAS+ PIY NS+VLLSWFAGKEALELE+L DEEII GVSAT+S L +K H DK CNGN +E + N V+ KVLKS+WG+DPLFLGSYSYVAVGSSG DLD MAEPLP++GS +S + PLQ+LFAGEATHRTHYSTTHGAYFSGLREANRLL+HY CVGV Sbjct: 2 VAKKPRIVIIGAGMAGLTAANKLHTSCSPAAAFELVVVEGGSRIGGRINTSEFGGDRIEMGATWIHGIGGSPVHEIAREIHALSSDQPWECMDGSSEDPARFTTVAEGGFELDRSLVEPVSTLFKSLMDYAQKKTVDHND-------YYKIACKSSNVFPSTNGSL---SVGSFLRKGLELYWGSKEKEEEEVLGYGNWNRKSLEEGVFRVHENTQRTYTSAGDLFTLDYVTESEYRMCSGEEITIAKGYLSIIEYLASALPPGLVQLGKKVKQIEWQIEKNG---LENGYGSSDNDSEYNDSNRPVKIHFCDGSTMVADHVIVTVSLGVLKAGVQESGNMFNPPLPCFKTEAIQRLGFGVVNKLFVQLNNNNNNNNKSKNDFPFLQMVFRKADSELREEKVPWWMRKTASMFPIYENSNVLLSWFAGKEALELESLRDEEIIGGVSATISSFL--AKPH--DKL----LCNGNGSLEEEEKNKWYEVKVKKVLKSQWGNDPLFLGSYSYVAVGSSGDDLDRMAEPLPRIGSHESANSPPLQLLFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGV 561
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy TrEMBL
Match: V7CBE3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G136900g PE=4 SV=1) HSP 1 Score: 693.73 bits (1789), Expect = 0.000e+0 Identity = 371/562 (66.01%), Postives = 427/562 (75.98%), Query Frame = 2 Query: 122 AKKPRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFSGEPKTIAEGGFELNASIVDPISTLFKNLMDFAQGKLTEDSAGSGGDACYYNFAAKAALKDCTSNGGFGNQSVGAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDS---GMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVE----SCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKL-GSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHY 1783 KK RIVIIGAGMAGLTAANKL++ + S LFE+ VVEGG+RIGGRINTSEF GDRIEMGATWIHGI GSP+H+IA++IHALESD+PWECMDG + TIAEGGF LN S V PI+ LF NLMD AQGK++ + + GD+ GN SVG+FLR+GL AYW S K+ +EL G+GKWSRKLL+EA+FAMHENTQRT TS DL LDY AESEY+MFPGEEITI+KGY +IIE LASVLPPG++QLGRKVTRIEWQPE H+++ + NG SRPV + F DGS M ADHVIVTVSLGVLK+ D MF+PPLP+FK EAISRLG+GVVNKLF+Q SP R FP LQ+VFH +SEL+H+KIP WMRRTA+L PIYNNSSVLLSWFAG+EAL +E+L +EEI GVS T+S L S EFCNGNV+ S + V+F KVLKS+WG+DPLFLGSYS+VAVGSSG D DTMAEPLPK S S PLQILFAGEATHRTHYSTTHGAYFSGLREANRLL+HY Sbjct: 3 VKKARIVIIGAGMAGLTAANKLHSVSVSKSLFEVCVVEGGNRIGGRINTSEFGGDRIEMGATWIHGIEGSPIHKIAQQIHALESDQPWECMDGNENKTTTIAEGGFVLNPSFVHPITKLFNNLMDHAQGKMSTATTTNKGDS--------------------GNLSVGSFLRQGLDAYWGSSKEEKELKGFGKWSRKLLDEAIFAMHENTQRTCTSVADLLTLDYGAESEYQMFPGEEITIAKGYSNIIESLASVLPPGLVQLGRKVTRIEWQPERHEAMNMENGTCSRPVVLHFSDGSIMSADHVIVTVSLGVLKASIHDDDSGMSMFHPPLPSFKAEAISRLGFGVVNKLFMQLSPPHGRRDEHSRGFPFLQMVFHSHQSELKHKKIPWWMRRTATLCPIYNNSSVLLSWFAGEEALAIESLKEEEISKGVSDTISCFLS----------RSVEFCNGNVKSEKHSSHEYKVKFSKVLKSEWGTDPLFLGSYSHVAVGSSGDDFDTMAEPLPKCSSSHPSASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHY 534
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy TrEMBL
Match: A0A0B2QXT4_GLYSO (Putative polyamine oxidase 5 OS=Glycine soja GN=glysoja_032252 PE=4 SV=1) HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0 Identity = 394/579 (68.05%), Postives = 445/579 (76.86%), Query Frame = 2 Query: 119 MAKKPRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFSGEPKTIAEGGFELNASIVDPISTLFKNLMDFAQGK--LTEDSAGSGGDACYYNFAAKAALKDCTSNGGFGNQ--SVGAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSI-QVPNG-YDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSG---TGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSP------NGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCD----DNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTD--SDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHYRCV 1792 + KKPRIVIIGAGMAGLTAA KLYT+T S LFEL VVEGG RIGGRINTSEF GDRIEMGATWIHGIGGSP+H+IA+EIH+L SD+PWECMDG + E TIAEGGF L+ SIVDPI+ LF LM+++QGK LTE ++ Y+ AA AA S + N SVG+FLR+GL AY S K++EE+ G G WSRKLLEEA+FAMHEN QRTYTSA DL LDY AESEYRMFPGEEITI+KGYLSIIE LASVLPPG +QLGRKVTRIEWQ + K V NG SRPVK+ FCDGS M ADHVIVTVSLGVLK+ DSGMF PPLP KTEAISRLG+GVVNKLF+Q SP +GN +N + FP LQ+VFH P+SE+ H+KIP WMRRTA+L PIYNNSSVLLSWF G+EAL LE+L DEEIINGVS+TVS L S+ K +S + CNGNV S + N V+F KV+KSKWG+DPLFLGSYSYVAVGSSG DLDTMAEPLPK S + PLQILFAGEATHRTHYSTTHGAYFSGLREANRLL+HY + Sbjct: 2 VVKKPRIVIIGAGMAGLTAA-KLYTATASKDLFELCVVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQEIHSLHSDQPWECMDGNTDEAITIAEGGFHLHPSIVDPITKLFNTLMEYSQGKKTLTEATSKGAELESYHKLAALAAKLASASASAYNNNNLSVGSFLRQGLEAYQVS-KEQEEVKGCGNWSRKLLEEAIFAMHENNQRTYTSADDLLTLDYGAESEYRMFPGEEITIAKGYLSIIESLASVLPPGFVQLGRKVTRIEWQLDDEKRKGAVENGCCSSRPVKLHFCDGSVMSADHVIVTVSLGVLKAAISDDDDDSGMFCPPLPPSKTEAISRLGFGVVNKLFMQLSPTHGEGKHGNEHSN--KGFPFLQMVFHSPQSEMGHKKIPWWMRRTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSCFLQHSQWQK-GSTSSHKLCNGNVNSEERSHHQNEVKFSKVMKSKWGTDPLFLGSYSYVAVGSSGDDLDTMAEPLPKDNSCQPPAASSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHWI 575
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy TrEMBL
Match: I1L1H1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0 Identity = 390/599 (65.11%), Postives = 450/599 (75.13%), Query Frame = 2 Query: 119 MAKKPRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFS----GEPKTIAEGGFELN-ASIVDPISTLFKNLMDFAQGKLTEDSAGSGGD-ACYYNFAAKAALKDCTSNGGFGNQSV-GAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQ---VPNG----YDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSG----TGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSP-NGNRPANDKEK----FPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKE-----DKYNSPEFCNGNVESCD------DNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPK-----LGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHYRCVGV 1798 + KKPRIVIIGAGMAGLTAANKLYT+T S LFEL VVEGG RIGGRINTSEF GDRIEMGATWIHGIGGSP+H+IA+EIH+L SD+PWECMDG + TIAEGGF L+ SIVDPI+ LF LM+++QGKL + ++ G + Y AAK A +SN N G+FLR+GL AY S +++EE+ G G WSRKLLEEA+FAMHEN QRTYTSA DLF LDY AESEY MFPGEEITI+KGYLSIIE+LASVLPPG++QLG+KVTRIEWQ + K + V N SRPVK+ FCDGS M ADHVIVTVSLGVLK+ DSGMF PPLP KTEAISRLG+GVVNKLF+Q SP +G ++ E+ FP LQ+ FH P+SE+R++KIP WMRRTA+L PIYNNSSVLLSWF G+EAL LE+L DEEIINGVS+TVS L +HH + +S + CNGNV S + N V+F KVLKSKWG+DPLFLGSYSYVAVGSSG DLD MAEPLPK S+ + PLQILFAGEATHRTHYSTTHGAYFSGLREANRLL+HY CVG+ Sbjct: 2 VVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQEIHSLHSDQPWECMDGNTVTDDATTITIAEGGFHLHHPSIVDPITKLFNTLMEYSQGKLNDTTSKGGSELESYQKLAAKVASVSASSNNNNKNNLSVGSFLRQGLEAYQVSKEEQEEVKGCGNWSRKLLEEAIFAMHENNQRTYTSADDLFTLDYGAESEYIMFPGEEITIAKGYLSIIEYLASVLPPGLVQLGKKVTRIEWQLDDEKRKKGGAVENNGCCSSSSRPVKLHFCDGSVMYADHVIVTVSLGVLKAAILDDDDDDSGMFYPPLPPSKTEAISRLGFGVVNKLFMQLSPTHGGLKQHENEQSDKGFPFLQMAFHSPQSEMRNKKIPWWMRRTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSFFL---QHHSQWQKGSTSCSSHKLCNGNVNSDEGRSHYLQNEVKFSKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDIMAEPLPKDNSSCQASSAASSSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGI 597
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy TrEMBL
Match: A0A0B2RTX6_GLYSO (Putative polyamine oxidase 5 OS=Glycine soja GN=glysoja_013268 PE=4 SV=1) HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0 Identity = 390/599 (65.11%), Postives = 450/599 (75.13%), Query Frame = 2 Query: 119 MAKKPRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFS----GEPKTIAEGGFELN-ASIVDPISTLFKNLMDFAQGKLTEDSAGSGGD-ACYYNFAAKAALKDCTSNGGFGNQSV-GAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQ---VPNG----YDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSG----TGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSP-NGNRPANDKEK----FPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKE-----DKYNSPEFCNGNVESCD------DNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPK-----LGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHYRCVGV 1798 + KKPRIVIIGAGMAGLTAANKLYT+T S LFEL VVEGG RIGGRINTSEF GDRIEMGATWIHGIGGSP+H+IA+EIH+L SD+PWECMDG + TIAEGGF L+ SIVDPI+ LF LM+++QGKL + ++ G + Y AAK A +SN N G+FLR+GL AY S +++EE+ G G WSRKLLEEA+FAMHEN QRTYTSA DLF LDY AESEY MFPGEEITI+KGYLSIIE+LASVLPPG++QLG+KVTRIEWQ + K + V N SRPVK+ FCDGS M ADHVIVTVSLGVLK+ DSGMF PPLP KTEAISRLG+GVVNKLF+Q SP +G ++ E+ FP LQ+ FH P+SE+R++KIP WMRRTA+L PIYNNSSVLLSWF G+EAL LE+L DEEIINGVS+TVS L +HH + +S + CNGNV S + N V+F KVLKSKWG+DPLFLGSYSYVAVGSSG DLD MAEPLPK S+ + PLQILFAGEATHRTHYSTTHGAYFSGLREANRLL+HY CVG+ Sbjct: 2 VVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQEIHSLHSDQPWECMDGNTVTDDATTITIAEGGFHLHHPSIVDPITKLFNTLMEYSQGKLNDTTSKGGSELESYQKLAAKVASVSASSNNNNKNNLSVGSFLRQGLEAYQVSKEEQEEVKGCGNWSRKLLEEAIFAMHENNQRTYTSADDLFTLDYGAESEYIMFPGEEITIAKGYLSIIEYLASVLPPGLVQLGKKVTRIEWQLDDEKRKKGGAVENNGCCSSSSRPVKLHFCDGSVMYADHVIVTVSLGVLKAAILDDDDDDSGMFYPPLPPSKTEAISRLGFGVVNKLFMQLSPTHGGLKQHENEQSDKGFPFLQMAFHSPQSEMRNKKIPWWMRRTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSFFL---QHHSQWQKGSTSCSSHKLCNGNVNSDEGRSHYLQNEVKFSKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDIMAEPLPKDNSSCQASSAASSSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGI 597
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: LSDA_DROME (Possible lysine-specific histone demethylase 1 OS=Drosophila melanogaster GN=Su(var)3-3 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.275e-17 Identity = 105/335 (31.34%), Postives = 154/335 (45.97%), Query Frame = 2 Query: 821 FPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSRPVKIEFCDGSSML---ADHVIVTVSLGVLKSGTGQ------DSGMFNPPLPTFKTEAISRLGYGVVNKLFLQ-----WSPNGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHY 1783 F G T+ GY + L L I++ V I++ G K ++V V +S + AD V+ T++LGVLK ++ F+PPLP +K +AI RLG+G +NK+ L W PN N + S R E W S+S +S VLL+ AG A +E+++D+ II + + + F N +V + V ++W SDP GSYSYV+VGSSG+D D +A P+ S D++ P ++ FAGE T R + +T HGAY SGLREA R+ +Y Sbjct: 553 FIGHHTTVRNGYSCVPVALTENLD---IRVNSAVKEIKY---GTKGVEV--------VAENLKTSNSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTAS------------RGEMFLFW-----SIS----SSPVLLALVAGMAANLVESVTDDIIIGRCMSVLKNI----------------FGNTSVPQPKETVV-------TRWRSDPWARGSYSYVSVGSSGSDYDLLAAPVIPPSSKDAEGLP-RLFFAGEHTIRNYPATVHGAYLSGLREAGRIADYY 828
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: KDM1B_HUMAN (Lysine-specific histone demethylase 1B OS=Homo sapiens GN=KDM1B PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 3.674e-17 Identity = 130/538 (24.16%), Postives = 209/538 (38.85%), Query Frame = 2 Query: 215 FELVVVEGGDRIGGRI-NTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFSGEPKTIAEGGFELNASIVDPISTLFKNLMDFA------QGKLTEDSAGSGGDACYYNFAAKAALKDCTSNGGFGNQSVGAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQ-----WSPN-------GNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRL 1771 ++ V+E DRIGGR+ + F G + GA ++G +PV AL ++ M F I EGG + +I + F L+D + +L + G + Y F ++ ++ ++ G L+ L +C +H+ + R++ + + F G+ ++ GY IIE LA L IQL V I+ Y V++ DG+ A V+VTV L +L+ G Q FNPPL K +AI+ LG G++ K+ LQ W G+ P + ++ L VF+ + + +H SVL+S AG+ + TL D++++ AT+ L KE + P K ++W +DP +YS+V G SG D +AE + + FAGEAT+R T GAY SG+REA+++ Sbjct: 406 IKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPV--------ALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQ--------FSELEGQVLQFHLSNLEYACGSN--------------------LHQVSARSW-----------DHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLD---IQLKSPVQCID--------------YSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQ----FNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKR--GLFAVFYDMDPQKKH--------------------SVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELF------KEQEVPDPT-----------------KYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQG-----------TVFFAGEATNRHFPQTVTGAYLSGVREASKI 819
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: PAO3_ARATH (Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO3 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.155e-14 Identity = 138/567 (24.34%), Postives = 222/567 (39.15%), Query Frame = 2 Query: 101 VEVETTMAKK--PRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFSGEPKTIAEGGFELNASIVDPISTLFKNLMDFAQGKLTEDSAGSGGDACYYNFAAKAALKDCTSNGGFGNQSVGAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREAN----RLLKHY 1783 V + M KK P +++IG GMAG++AA L D F++VV+E DRIGG R+ ++ G PV A +H + + P + G G P G N+ + D + L D A +++++ G+ + ++D Q+ +R EL G L V + + +A D + + + + PG + +GY +I L+ L I+L ++T+I + G VK+ G + +AD ++ + LGVLKSG F P LP +K EAI+ LG G+ NK+ L + D +P+++ + E+ + T+ VL+ AG+ A ++E SDE N + + +LP + +SP L S+WGSD LGSYSY V + + PL L FAGEAT ++ + HGAY +G+ A R+L+ Y Sbjct: 17 VSTDEKMKKKRSPSVIVIGGGMAGISAARTL-----QDASFQVVVLESRDRIGG----------RVHTDYSF-----GFPVDLGASWLHGVCKENPLAAVIGRLGLPLYRTSGD---NSVLYDHDLESYA-LFDKAGNQVSQELVTKVGENFEHILEEICKVRDEQDEDMSIAQAFSIVFKRN-----------PELRLEG------LAHNVLQWYLCRMEGWFAA-DAETISAKCWDQEELLPGGHGLMVRGYRPVINTLSKGLD---IRLSHRITKISRRYSG--------------VKVTTEKGDTFVADAAVIALPLGVLKSGMIT----FEPKLPQWKQEAINDLGVGIENKIILNF---------DNVFWPNVEFLGVVAETSYGCSYFLNLHKATS--------HPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDA--------SSPI-----------------NYLVSRWGSDINSLGSYSYDIVNKPHDLYERLRVPLDNL------------FFAGEATSSSYPGSVHGAYSTGVLAAEDCRMRVLERY 466
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: LDL3_ARATH (Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana GN=LDL3 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.133e-13 Identity = 98/336 (29.17%), Postives = 146/336 (43.45%), Query Frame = 2 Query: 812 YRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSR-PVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPANDKEKFPSLQIVF----------HPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLKHYR 1786 Y F G I GY ++E LA L I L + V+ + + + V +S+ V++ +G L D V+VTV LG LK+ T + F+PPLP +K +I +LG+GV+NK+ L+ FP+ VF E++LR E W + +P VL++ GK A E S E +N ++ + K D P V S + + WG+DP G+YSYVA+G+SG D D + P+ + FAGEAT + H T GA +G+REA R++ R Sbjct: 841 YGGFGGPHAMIKGGYSRVVESLAEGLD---IHLNKIVSDVSYVSD------VSAMDNSKHKVRVSTSNGCEYLGDAVLVTVPLGCLKAETIK----FSPPLPDWKYASIKQLGFGVLNKVVLE--------------FPT---VFWDDSVDYFGATAEETDLRGECFMFWNVKKTVGAP------VLIALVVGKAAFEYTNKSKSEHVN------HAMMVLRKLFGGDLVPDP------VAS-----------VVTDWGTDPYSYGAYSYVAIGASGEDYDVLGRPVQNC-----------LFFAGEATCKEHPDTVGGAMMTGVREAVRIIDILR 1106
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: KDM1B_MOUSE (Lysine-specific histone demethylase 1B OS=Mus musculus GN=Kdm1b PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 6.140e-13 Identity = 120/533 (22.51%), Postives = 204/533 (38.27%), Query Frame = 2 Query: 215 FELVVVEGGDRIGGRI-NTSEFCGDRIEMGATWIHGIGGSPVHQIAREIHALESDKPWECMDGFSGEPKTIAEGGFELNASIVDPISTLFKNLMDFA------QGKLTEDSAGSGGDACYYNFAAKAALKDCTSNGGFGNQSVGAFLRRGLGAYWDSCKDREELNGYGKWSRKLLEEAVFAMHENTQRTYTSAGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIY-------NNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRL 1771 ++ V+E DRIGGR+ + F G + G ++G +PV AL ++ M I EGG + ++ + F L+D + L + G + Y F ++ ++ ++ G L+ L +C ++H+ + R++ + + F G+ ++ GY +IIE LA L I+L V I+ Y V++ DG A V+VTV L +L+ G Q FNPPL K +AI+ LG G++ K+ LQ FP + +S+++ G + +AS ++ + SVL+S G+ L T+ D++++ + L KE + P K ++W ++P +YS+V SG D +AE + + FAGEAT+R T GAY SG+REA+++ Sbjct: 412 MKVTVLEAKDRIGGRVWDDKSFKGVVVGRGPQIVNGCINNPV--------ALMCEQLGISMRKLGERCDLIQEGGRITDPTVDKRMDFHFNALLDVVSEWRKDKTLLQDVPLGEKIEEIYRAFVKESGIQ--------FSELEGQVLQFHLSNLEYACGS--------------------SLHQVSARSW-----------DHNEFFAQFAGDHTLLTPGYSTIIEKLAEGLD---IRLKSPVQSID--------------YTGDEVQVTTTDGMGHSAQKVLVTVPLAILQRGAIQ----FNPPLSEKKMKAINSLGAGIIEKIALQ--------------FP-----YRFWDSKVQGADFFGHVPPSASQRGLFAVFYDMDSQQSVLMSVITGEAVASLRTMDDKQVLQQCMGILRELF------KEQEIPEPT-----------------KYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAEEIQG-----------TVFFAGEATNRHFPQTVTGAYLSGVREASKI 823
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: LDL2_ARATH (Lysine-specific histone demethylase 1 homolog 2 OS=Arabidopsis thaliana GN=LDL2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.438e-12 Identity = 85/265 (32.08%), Postives = 122/265 (46.04%), Query Frame = 2 Query: 998 IEFCDGSSML-ADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPA----NDKEKFPSLQIVFHPPESEL-RHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREANRLL 1774 +E GS + AD ++ TV LGVLK + S F P LP K AI RLG+G++NK+ + + P+ ++ + F L ES + R E + T S P L++ AG+ A E +++ V + G+ D + C ++WGSDPL GSYS+V VGSSG D D +AE + ++ FAGEAT R H +T HGAY SGLREA+++L Sbjct: 384 VEVISGSQIFQADMILCTVPLGVLK----KRSIKFEPELPRRKQAAIDRLGFGLLNKVAMLF------PSVFWGDELDTFGCLN------ESSINRGEFFLFYAYHTVSGGP------ALVALVAGEAAQRFECTEPSVLLHRVLKKLRGIYGPKGVVVPDPIQT--VC-------------------TRWGSDPLSYGSYSHVRVGSSGVDYDILAESVSN-----------RLFFAGEATTRQHPATMHGAYLSGLREASKIL 594
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: PAO2_ARATH (Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.789e-11 Identity = 89/331 (26.89%), Postives = 139/331 (41.99%), Query Frame = 2 Query: 770 AGDLFNLDYEAESEYRMFPGEEITISKGYLSIIEHLASVLPPGVIQLGRKVTRIEWQPEGHKSIQVPNGYDSRPVKIEFCDGSSMLADHVIVTVSLGVLKSGTGQDSGMFNPPLPTFKTEAISRLGYGVVNKLFLQWSPNGNRPANDKEKFPSLQIVFHPPESELRHEKIPGWMRRTASLSPIYNNSSVLLSWFAGKEALELETLSDEEIINGVSATVSGLLPVSKHHKEDKYNSPEFCNGNVESCDDNGVRFGKVLKSKWGSDPLFLXXXXXXXXXXXXXDLDTMAEPLPKLGSTDSDHHPLQILFAGEATHRTHYSTTHGAYFSGLREA 1762 A D + + + + PG + +GY +I LA L I++G +VT+I ++ NG VK+ +G + +AD ++ V LGVLKSGT + F P LP +K EAI+ LG G+ NK+ L + +K +P ++ + E+ + T VL+ AG+ A ++E +SDE N + +LP + + + L S+WGSD +GSYSY VG + + P+ L FAGEAT + + HGAY +GL A Sbjct: 199 AADAETISAKCWDQEELLPGGHGLMVRGYRPVINTLAKGLD---IRVGHRVTKI---------VRRYNG-----VKVTTENGQTFVADAAVIAVPLGVLKSGTIK----FEPKLPEWKQEAINDLGVGIENKIILHF---------EKVFWPKVEFLGVVAETSYGCSYFLNLHKATG--------HPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILP-------------------------DALPPVQYLVSRWGSDVNSMGSYSYDIVGKPHDLYERLRVPVDNL------------FFAGEATSSSFPGSVHGAYSTGLMAA 454
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Match: PAO4_ARATH (Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 7.123e-9 Identity = 31/78 (39.74%), Postives = 51/78 (65.38%), Query Frame = 2 Query: 128 KPRIVIIGAGMAGLTAANKLYTSTGSDHLFELVVVEGGDRIGGRINTSEFCGDRIEMGATWIHGIGG-SPVHQIAREI 358 +P +++IG+G++GL AA L S+ F++ V+E DRIGGRI+T G ++MGA+W+HG+ +P+ I R + Sbjct: 28 QPSVIVIGSGISGLAAARNL-----SEASFKVTVLESRDRIGGRIHTDYSFGCPVDMGASWLHGVSDENPLAPIIRRL 100 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0016974 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 18
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0016974 ID=g.arboreum_cottongen_reftransV1_0016974; Name=g.arboreum_cottongen_reftransV1_0016974; organism=Gossypium arboreum; type=contig; length=1985bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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