g.arboreum_cottongen_reftransV1_0003584, g.arboreum_cottongen_reftransV1_0003584 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy TrEMBL
Match: A0A0B0NWM3_GOSAR (Ubiquitin-conjugating enzyme E2 34-like protein OS=Gossypium arboreum GN=F383_04625 PE=4 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 2.838e-128 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYNKQQQLISEHSSPESPQGENSKPKTEKLVGSSGEDVKKVIPRRKQPFPTWMMFLLVSVFGIVMALPLLQL 547 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYNKQQQLISEHSSPESPQGENSKPKTEKLVGSSGEDVKKVIPRRKQPFPTWMMFLLVSVFGIVMALPLLQL Sbjct: 49 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYNKQQQLISEHSSPESPQGENSKPKTEKLVGSSGEDVKKVIPRRKQPFPTWMMFLLVSVFGIVMALPLLQL 230
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy TrEMBL
Match: A0A0D2UPH2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G054900 PE=4 SV=1) HSP 1 Score: 352.058 bits (902), Expect = 2.782e-116 Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYNKQQQLISEHSSPESPQGENSKPKTEKLVGSSGEDVKKVIPRRKQPFPTWMMFLLVSVFGI 520 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVD+Y KQQQLISEHSSPESPQGENSKPKTEKLV SSGEDVKKVIPRRKQPFPTWMM LLVSVFGI Sbjct: 49 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDRYKKQQQLISEHSSPESPQGENSKPKTEKLVDSSGEDVKKVIPRRKQPFPTWMMLLLVSVFGI 221
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy TrEMBL
Match: A0A0D2SUM5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G173000 PE=4 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 2.466e-113 Identity = 165/188 (87.77%), Postives = 172/188 (91.49%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYNKQQQLISEHSSPESPQGENSKPKTEKLVGSSGEDVKKVIPRR------KQPFPTWMMFLLVSVFGIVMALPLLQL 547 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTT EK RLAKTSL+FNCKNPTFRKLFPEYVDK+NKQQQL+SEH SPESP+GENSKP+TEK+V SSGEDVKKV R KQ FPTWMM LLVS+FGIVMALPLLQL Sbjct: 49 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTVTEKLRLAKTSLAFNCKNPTFRKLFPEYVDKHNKQQQLVSEHLSPESPEGENSKPETEKVVNSSGEDVKKVDTLRNTRRIQKQSFPTWMMLLLVSIFGIVMALPLLQL 236
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy TrEMBL
Match: A0A0B0NSN3_GOSAR (Ubiquitin-conjugating enzyme E2 34-like protein OS=Gossypium arboreum GN=F383_20734 PE=4 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 7.653e-113 Identity = 164/188 (87.23%), Postives = 172/188 (91.49%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYNKQQQLISEHSSPESPQGENSKPKTEKLVGSSGEDVKKVIPRR------KQPFPTWMMFLLVSVFGIVMALPLLQL 547 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTT +EK RLAK SL+FNCKNPTFRKLFPEYVDK+NKQQQL+SEH SPESPQGENSKP+TEK+V SSG+DVKKV R KQ FPTWMM LLVS+FGIVMALPLLQL Sbjct: 49 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTVSEKLRLAKASLAFNCKNPTFRKLFPEYVDKHNKQQQLVSEHLSPESPQGENSKPETEKVVNSSGKDVKKVDTLRNTRRNQKQSFPTWMMLLLVSIFGIVMALPLLQL 236
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy TrEMBL
Match: A0A061GJX4_THECC (Ubiquitin-conjugating enzyme 34 isoform 2 OS=Theobroma cacao GN=TCM_029255 PE=4 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 3.060e-108 Identity = 162/189 (85.71%), Postives = 168/189 (88.89%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYNK-QQQLISEHSSPESPQGENSKPKTEKLVGSSGEDVKKVIP------RRKQPFPTWMMFLLVSVFGIVMALPLLQL 547 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAK SL+FNCKNPTFRKLFPEYVDKYNK QQQL+SEH SPES + EN KP+ EK V SS ED K+V P RKQ FPTWMM LLVS+FGIVMALPLLQL Sbjct: 51 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKASLAFNCKNPTFRKLFPEYVDKYNKQQQQLVSEHLSPESTKEENLKPEAEKRVKSSVEDGKRVDPLRDTRRNRKQSFPTWMMLLLVSIFGIVMALPLLQL 239
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy TrEMBL
Match: A0A061GDB5_THECC (Ubiquitin-conjugating enzyme 34 isoform 1 OS=Theobroma cacao GN=TCM_029255 PE=4 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 3.188e-108 Identity = 162/189 (85.71%), Postives = 168/189 (88.89%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYNK-QQQLISEHSSPESPQGENSKPKTEKLVGSSGEDVKKVIP------RRKQPFPTWMMFLLVSVFGIVMALPLLQL 547 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAK SL+FNCKNPTFRKLFPEYVDKYNK QQQL+SEH SPES + EN KP+ EK V SS ED K+V P RKQ FPTWMM LLVS+FGIVMALPLLQL Sbjct: 49 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKASLAFNCKNPTFRKLFPEYVDKYNKQQQQLVSEHLSPESTKEENLKPEAEKRVKSSVEDGKRVDPLRDTRRNRKQSFPTWMMLLLVSIFGIVMALPLLQL 237
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy TrEMBL
Match: A0A067L948_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24623 PE=4 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.033e-101 Identity = 153/191 (80.10%), Postives = 167/191 (87.43%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYNKQQ---QLISEHSSPESPQGENSKPKTEKLVGSSGEDVKKVI----PR--RKQPFPTWMMFLLVSVFGIVMALPLLQL 547 FAGGYYYGKIKFPPEYPYKPPGITMITP+GRF+TQKKICLSMSDFHPESWNPMWS SSILTGLLSFMMDNSPTTGSVN+T AEKQRLAK SL+FNCKNPTFRKLFPEYV+KYN+QQ Q+I+E +S E+ Q E S+PK EKL SGEDVK+V PR RKQ FPTW+M LLVS+FGIVMALPLLQL Sbjct: 49 FAGGYYYGKIKFPPEYPYKPPGITMITPSGRFLTQKKICLSMSDFHPESWNPMWSASSILTGLLSFMMDNSPTTGSVNSTVAEKQRLAKASLAFNCKNPTFRKLFPEYVEKYNQQQQSEQIITEQASTEASQEEKSRPKLEKLDNFSGEDVKRVDTLKGPRGNRKQTFPTWVMLLLVSIFGIVMALPLLQL 239
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy TrEMBL
Match: A0A067EIR1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026499mg PE=4 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 2.939e-99 Identity = 151/191 (79.06%), Postives = 163/191 (85.34%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYNKQQ---QLISEHSSPESPQGENSKPKTEKLVGSSGEDVKKV-IPR-----RKQPFPTWMMFLLVSVFGIVMALPLLQL 547 FAGGYYYGKIKFPPEYPYKPPGI MITPNGRFMTQKK+CLSMSDFHPESWNPMWSVSSILTGLLSFMMD SPTTGSVNTT EKQRLAK SL+FNCKNP FRKLFPEYV+KYN+QQ Q +SE SPESP ENS+PK EK+ SGED+K + P+ RKQ FPTWM+ LLVS+FGIVMALPLLQL Sbjct: 49 FAGGYYYGKIKFPPEYPYKPPGILMITPNGRFMTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQLAEQRVSEQLSPESPNEENSRPKVEKV--GSGEDMKTIDTPKEARKNRKQSFPTWMLLLLVSIFGIVMALPLLQL 237
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy TrEMBL
Match: A0A067ES86_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026499mg PE=4 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 7.756e-99 Identity = 151/191 (79.06%), Postives = 163/191 (85.34%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYNKQQ---QLISEHSSPESPQGENSKPKTEKLVGSSGEDVKKV-IPR-----RKQPFPTWMMFLLVSVFGIVMALPLLQL 547 FAGGYYYGKIKFPPEYPYKPPGI MITPNGRFMTQKK+CLSMSDFHPESWNPMWSVSSILTGLLSFMMD SPTTGSVNTT EKQRLAK SL+FNCKNP FRKLFPEYV+KYN+QQ Q +SE SPESP ENS+PK EK+ SGED+K + P+ RKQ FPTWM+ LLVS+FGIVMALPLLQL Sbjct: 40 FAGGYYYGKIKFPPEYPYKPPGILMITPNGRFMTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQLAEQRVSEQLSPESPNEENSRPKVEKV--GSGEDMKTIDTPKEARKNRKQSFPTWMLLLLVSIFGIVMALPLLQL 228
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy TrEMBL
Match: V4RYE9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026383mg PE=4 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 3.107e-98 Identity = 150/191 (78.53%), Postives = 162/191 (84.82%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYNKQQ---QLISEHSSPESPQGENSKPKTEKLVGSSGEDVKKV-IPR-----RKQPFPTWMMFLLVSVFGIVMALPLLQL 547 FAGGYYYGKIKFPPEYPYKPPGI MITPNGRFMTQKK+CLSMSDFHPESWNPMWSVSSILTGLLSFMMD SPTTGSVNTT EKQRLAK SL+FNCKNP FRKLFPEYV+KYN+QQ Q +SE SPES ENS+PK EK+ SGED+K + P+ RKQ FPTWM+ LLVS+FGIVMALPLLQL Sbjct: 49 FAGGYYYGKIKFPPEYPYKPPGILMITPNGRFMTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQQLAEQRVSEQLSPESRNEENSRPKVEKV--GSGEDMKTIDTPKEARKNRKQSFPTWMLLLLVSIFGIVMALPLLQL 237
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=UBC6 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 5.009e-35 Identity = 67/151 (44.37%), Postives = 93/151 (61.59%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNC-KNPTFRKLFPEYVDKYNK--QQQLISEHSSPESPQGENSKPKTEKLVGSSGEDV 445 + G Y+G + FP +YP+ PP I MITPNGRF ++CLSMSD+HPE+WNP WSV +IL GLLSFM + TTGSV+T+ +K+ LAK S FN N F+ +FP+ + K +++ E S + Q EN K +S +D+ Sbjct: 49 YENGQYHGTLTFPSDYPFNPPAIRMITPNGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMTGDEQTTGSVSTSDKDKRTLAKKSKHFNTYSNFKFKNMFPDLRESNIKDIEREAALEAESKGAQQEENKAQKLATEKATSLDDI 199
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC6 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.321e-31 Identity = 51/112 (45.54%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNC-KNPTFRKLFPEYVDK 334 + G Y+G + FP +YP+ PP I M+TPNGRF ++CLSMSD+HP++WNP WSV++ILTGLLSFM + + G++ +T + K++ A S N ++P F ++FPE ++ Sbjct: 49 YEDGQYHGTLVFPNDYPFNPPAIRMLTPNGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMTTDESSIGTMESTDSTKRKYAAKSKEHNATRSPIFCQIFPELAEQ 160
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy Swiss-Prot
Match: UB2JL_DICDI (Ubiquitin-conjugating enzyme E2 J2-like OS=Dictyostelium discoideum GN=DDB_G0294380 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.378e-30 Identity = 64/106 (60.38%), Postives = 77/106 (72.64%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFP 319 + GG YYG++ F YP PP I M TP+GRF TQK++CLS+SD+HPESW+P WS SSIL GLLSFM DN T GS+ TT EK+ LA S+ FN KN TF +LFP Sbjct: 59 YEGGVYYGQLIFKYNYPLSPPSILMTTPSGRFETQKRLCLSISDYHPESWSPSWSTSSILLGLLSFMSDNEVTAGSIVTTNDEKRILATKSMDFNKKNKTFCELFP 164
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy Swiss-Prot
Match: UB2J1_HUMAN (Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens GN=UBE2J1 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 1.583e-24 Identity = 47/98 (47.96%), Postives = 62/98 (63.27%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFM-MDNSPTTGSVNTTAAEKQRLAKTSLSFNCK 292 F GG Y+G+I PPEYP KPP I ++T NGRF KKICLS+S HPE+W P WS+ + L ++ FM GS++ T E++ LAK S F C+ Sbjct: 53 FDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDFCCE 150
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy Swiss-Prot
Match: UB2J1_MOUSE (Ubiquitin-conjugating enzyme E2 J1 OS=Mus musculus GN=Ube2j1 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 2.126e-24 Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFM-MDNSPTTGSVNTTAAEKQRLAKTSLSFNCKN 295 F GG Y+G+I PPEYP KPP I ++T NGRF KKICLS+S HPE+W P WS+ + L ++ FM GS++ T E++ LAK S F C+ Sbjct: 53 FDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDFCCEG 151
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy Swiss-Prot
Match: UBC32_ARATH (Ubiquitin-conjugating enzyme E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 9.348e-23 Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP--TTGSVNTTAAEKQRLAKTS 274 F GG Y+G+I+ P +YP+KPP ++TPNGRF T KICLS+S++HPE W P WSV + L L++F M SP GSV+ E++ LA S Sbjct: 55 FEGGIYHGRIQLPADYPFKPPSFMLLTPNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAF-MPTSPNGALGSVDYPKDERRTLAIKS 146
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy Swiss-Prot
Match: UBC2_MIMIV (Probable ubiquitin-conjugating enzyme E2 L709 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L709 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.780e-18 Identity = 43/122 (35.25%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITPNGRFMTQK--------KICLSMSDFHPESWNPMWSVSSILTGLLSFMMD-NSPTTGSVNTTAAEKQRLAKTSLSFNCKNPTFRKLFPEYVDKYN 340 F GG Y+G I+ ++P++PP + MITP+GRF +K IC + + FHPESW M ++ ++L G +S M D G+V +T + ++LA+ SL+ + +KLFP+ N Sbjct: 49 FEGGLYHGMIRLNNDHPFRPPNLHMITPSGRFEAEKYPISPNSRGICTTATSFHPESWTSMNNLETVLKGFVSLMCDPYDGGVGAVKSTDTQVKKLAQDSLTHIGNDLMVQKLFPDLYKAVN 170
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 4.345e-8 Identity = 32/98 (32.65%), Postives = 51/98 (52.04%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPT---TGSVN----TTAAEKQRLAK 268 + GG ++ I F PEYP+KPP +T T + +Q ICL D ++W+P ++S +L + S + D +P GS+ T AE R+A+ Sbjct: 91 YEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMAR 185
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 4.693e-8 Identity = 32/98 (32.65%), Postives = 51/98 (52.04%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPT---TGSVN----TTAAEKQRLAK 268 + GG ++ I F PEYP+KPP +T T + +Q ICL D ++W+P ++S +L + S + D +P GS+ T AE R+A+ Sbjct: 91 YEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMAR 185
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 9.427e-8 Identity = 31/98 (31.63%), Postives = 51/98 (52.04%), Query Frame = 2 Query: 2 FAGGYYYGKIKFPPEYPYKPPGITMITP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPT---TGSVN----TTAAEKQRLAK 268 + GG ++ I F P+YP+KPP +T T + +Q ICL D ++W+P ++S +L + S + D +P GS+ T AE R+A+ Sbjct: 99 YEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICL---DILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMAR 193 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0003584 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 24
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0003584 ID=g.arboreum_cottongen_reftransV1_0003584; Name=g.arboreum_cottongen_reftransV1_0003584; organism=Gossypium arboreum; type=contig; length=878bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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