g.arboreum_cottongen_reftransV1_0015123, g.arboreum_cottongen_reftransV1_0015123 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0015123
Unique Nameg.arboreum_cottongen_reftransV1_0015123
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1529
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr12chromosomeg.arboreum_cottongen_reftransV1_0015123:3..1529 .
Chr12:55260877..55263082 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: A0A059B4N8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03350 PE=4 SV=1)

HSP 1 Score: 677.937 bits (1748), Expect = 0.000e+0
Identity = 326/427 (76.35%), Postives = 370/427 (86.65%), Query Frame = 1
Query:    1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSRPQVTLLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAKDTFYVTDVTGNLVDPKIIDSIRAQIGHTALQVKRNSSLAPKPPHQETTMGHFFGNLFKARTFQNFKLIR 1278
            PRVVIDN +CEDATVI VDS+NKHGILLEVVQVL DMNLTITKAYISSDGGWFMDVFNV+D DG KI++KEV++YI+ R+E++A   PS R SVG MP+ EHTSIEL+GTDRPGLLSEVCAVL DLHCNVVNAEIWTHNARAAAVVHVTDD+ G AI DPKRL+TI++LLCNVLK   D+ TAK TLS+PGV +R RRLHQIMFADRDYERV+K  +R + + S+RP VT+++  EKDYT++TMRSKDRPKLLFDI+CTLTDMQYVVFHGMVNTGR EAYQEFYIRHVDGLPI SEAER R+ QCLEAAIERRASEGLELELC +DR+GLL+D+TR+FREN LC++RA ISTK GKAKDTFYV+DVTG+ VD KIIDSIR QI  + LQVK NS L PK P QETT G  FGN F+ R FQNFKL+R
Sbjct:   15 PRVVIDNKSCEDATVIQVDSINKHGILLEVVQVLIDMNLTITKAYISSDGGWFMDVFNVIDCDGKKIKEKEVIEYIKRRLESNASISPSFRESVGFMPSNEHTSIELSGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNARAAAVVHVTDDTTGHAIKDPKRLATIRDLLCNVLKADGDVNTAKMTLSSPGVTNRGRRLHQIMFADRDYERVDKEEIRRMHDNSTRPFVTVMDCYEKDYTIVTMRSKDRPKLLFDIICTLTDMQYVVFHGMVNTGRKEAYQEFYIRHVDGLPIGSEAERERITQCLEAAIERRASEGLELELCAEDRVGLLADVTRLFRENGLCVKRAEISTKDGKAKDTFYVSDVTGSPVDLKIIDSIRRQIVPSVLQVKHNSLLLPKKP-QETTGGFLFGNFFRTRNFQNFKLVR 440          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: I1N7U8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0
Identity = 328/429 (76.46%), Postives = 373/429 (86.95%), Query Frame = 1
Query:    1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSR--PQVTLLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAKDTFYVTDVTGNLVDPKIIDSIRAQIGHTALQVKRNSSLAPKPPHQETTMGHFFGNLFKARTFQNFKLIR 1278
            PRVVIDNNACE+ATVI VDSVNKHGILL+VVQV++DMNL ITKAYISSDG WFMDVFNV+D+ GNKIRDKEV+DYIQ R+E +  FVPS R SVGV+P EEHT IEL GTDRPGLLSE+CAVL DLHCNVV AEIWTHN RAAAVVHVTDDS GCAI DP RLSTI++LL NVL+GS+D KTA+TTLS  GV +R+RRLHQIMFADRDYER+E+AG   + +   R  P VT+ + +EKDYTV+TMR++DRPKLLFDIVCTLTDMQYVVFHG+V T R+EA+QEFYIRHVDG PISSEAER R++QCLEAAIERRASEG+ LELCT+DR+GLLSDITR FRENSLCI+RA IST+ GKA+DTFYVTDVTGN VDPKIIDSIR QIG   L+VK NS+L+PKPP Q TT+G   GN FKAR+FQNFKLI+
Sbjct:   15 PRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISSDGVWFMDVFNVIDHKGNKIRDKEVIDYIQRRLENNPSFVPSLRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTIRDLLSNVLRGSNDPKTARTTLSPHGVTNRDRRLHQIMFADRDYERIERAGQEELRDRDKRPLPHVTVGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAFQEFYIRHVDGFPISSEAERERLMQCLEAAIERRASEGMGLELCTEDRVGLLSDITRTFRENSLCIKRAEISTEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPP-QPTTIGFLLGNFFKARSFQNFKLIK 442          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: V7CXR8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G089200g PE=4 SV=1)

HSP 1 Score: 675.241 bits (1741), Expect = 0.000e+0
Identity = 329/429 (76.69%), Postives = 368/429 (85.78%), Query Frame = 1
Query:    1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSR--PQVTLLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAKDTFYVTDVTGNLVDPKIIDSIRAQIGHTALQVKRNSSLAPKPPHQETTMGHFFGNLFKARTFQNFKLIR 1278
            PRVVIDNNACE+ATVI VDSVNKHGILL+VVQV++DMNL ITKAYISSDG WFMDVFNV+D +GNKIRDKEV+DYIQ RIE +  F PS R SVGV+P EEHT IEL GTDRPGLLSE+CAVL DLHCNVV AEIWTHN RAAAVVHVTDDS GCAI DP RLSTI++LL NVL+GS+D KTAKTTLS PGV +R+RRLHQIMFADRDYER+E+ G  A+ +   R  P VT+++ ++KDYTV+TMR+ DRPKLLFDIVCTLTDMQYVVFHG+V T R EA+QEFYIRHVDG PIS EAER R++QCLEAAIERRASEG+ELELCT DR+GLLSDITRIFRENSLCI+RA IST+ G A+DTFYVTDVTGN VDPKIIDSIR QIG   L VK NSSL+PK   Q TT+G   GN FKAR+FQNFKLIR
Sbjct:   15 PRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISSDGVWFMDVFNVIDRNGNKIRDKEVIDYIQRRIENNPSFAPSLRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTIRDLLSNVLRGSNDPKTAKTTLSPPGVTNRDRRLHQIMFADRDYERIEREGRGALRDRGKRPLPHVTVVDCVDKDYTVVTMRATDRPKLLFDIVCTLTDMQYVVFHGVVKTVRTEAFQEFYIRHVDGFPISLEAERERLVQCLEAAIERRASEGMELELCTKDRVGLLSDITRIFRENSLCIKRAEISTEEGMARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLNVKHNSSLSPK-ASQPTTIGFLLGNFFKARSFQNFKLIR 442          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: U5GV64_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s33460g PE=4 SV=1)

HSP 1 Score: 674.085 bits (1738), Expect = 0.000e+0
Identity = 326/390 (83.59%), Postives = 351/390 (90.00%), Query Frame = 1
Query:  109 MNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSRPQVTLLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAKDTFYVTDVTGNLVDPKIIDSIRAQIGHTALQVKRNSSLAPKPPHQETTMGHFFGNLFKARTFQNFKLIR 1278
            MNL ITKAYISSDG WFMDVFNVVD DG KIRDKEVMDYIQ R+E++A F PS RGSVGVMP+EEHT+IEL GTDRPGLLSEVCAVL DLHCNVVNAEIWTHN RAAAVVHVTDDS GCAI DPKRLSTI+ELLCNVLKG+DD KTA TTLS PGV  RERRLHQIMFADRDYERVE+AG+   E+ SSRP VT+LNIE+DYTV++MRSKDRPKLLFDIVCTLTDM+YVVFHGMV+TGR+EAYQEFYIRHVDGLP+SS+AER RV+QCLEAAIERRASEGLELELCT+DR+GLLSDITRIFRENSLCI+RA I TK GKAKDTFYVTDVTGN VDPKIIDSI  QIG T L VKRNS L+PKPP QETTMG+ FGNLFKART   FKLIR
Sbjct:    1 MNLVITKAYISSDGDWFMDVFNVVDQDGKKIRDKEVMDYIQRRLESNASFAPSLRGSVGVMPSEEHTAIELTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTIRELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSSRPHVTVLNIERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRHVDGLPVSSDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIKRAEILTKGGKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPP-QETTMGYIFGNLFKART---FKLIR 386          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: A0A0D2Q388_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G043900 PE=4 SV=1)

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 323/357 (90.48%), Postives = 340/357 (95.24%), Query Frame = 1
Query:    1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSRPQVTLLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAK 1071
            PRVVIDNNACEDATVI VDSVNKHGILLEVVQVLTDMNLTI KAYI+SDGGWFMDVFNVVDNDGNKIRDKE++DYIQ RIETSAGFVPS+RGSVGVMP+EEHTSIELAGTDRPGLLSEVCAVLADL CNVVNAEIWTHN RAAAVVHVTDDS GCAI+DPKRL  IK+LLCNVLKG+DDLKTAKT LSAPGVMHRERRLHQIMFADRDYERVEK GVRAVEE SS+PQV LLNIEKDYTVITMR+KDRPKLLFDI+CTLTDMQYVVFHGMVNT R++A QEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCT+DRLGLLSDITRIFRENSLCI+RALISTK  + +
Sbjct:   15 PRVVIDNNACEDATVIQVDSVNKHGILLEVVQVLTDMNLTIRKAYIASDGGWFMDVFNVVDNDGNKIRDKEIIDYIQRRIETSAGFVPSQRGSVGVMPSEEHTSIELAGTDRPGLLSEVCAVLADLRCNVVNAEIWTHNTRAAAVVHVTDDSTGCAITDPKRLLMIKDLLCNVLKGNDDLKTAKTMLSAPGVMHRERRLHQIMFADRDYERVEKTGVRAVEERSSKPQVNLLNIEKDYTVITMRAKDRPKLLFDIICTLTDMQYVVFHGMVNTTRMDANQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTEDRLGLLSDITRIFRENSLCIKRALISTKGDRPE 371          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_RHOPA (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=glnD PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 3.094e-7
Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 1
Query:  295 AEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSD 534
            ++ +T IE++G DRPGLL ++   ++ L+ N+ +A + T   RA  V +VT D +G  I+ P R + IK  L ++L   D
Sbjct:  844 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQITAPTRQAAIKRALVHLLANGD 922          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_VIBVY (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Vibrio vulnificus (strain YJ016) GN=glnD PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 3.898e-7
Identity = 49/199 (24.62%), Postives = 88/199 (44.22%), Query Frame = 1
Query:    1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYI-SSDGGWFMDVFNVVDNDGNKI---RDKEVMDYI----------------------QSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNV 519
            P V++   A    T + V + ++H +   VV  L   N  +  A I SS  G+ +D F V+D  G  I     K V+ ++                        +++T   F+P++        +++ T +EL   D PGLL+   A  AD+  N+  A+I T   RA  +  +T ++ G  +S+ + L   ++L+ N+
Sbjct:  679 PLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKDGYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVLTDGRPTKVKTRRTPYKLQHFKVKTKVDFLPTK--------SKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSEN-GGRLSEEQELQLREKLIHNI 868          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_VIBVU (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Vibrio vulnificus (strain CMCP6) GN=glnD PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 3.932e-7
Identity = 49/199 (24.62%), Postives = 88/199 (44.22%), Query Frame = 1
Query:    1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYI-SSDGGWFMDVFNVVDNDGNKI---RDKEVMDYI----------------------QSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNV 519
            P V++   A    T + V + ++H +   VV  L   N  +  A I SS  G+ +D F V+D  G  I     K V+ ++                        +++T   F+P++        +++ T +EL   D PGLL+   A  AD+  N+  A+I T   RA  +  +T ++ G  +S+ + L   ++L+ N+
Sbjct:  679 PLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKDGYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVLADGRPTKVKTRRTPYKLQHFKVKTKVDFLPTK--------SKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSEN-GGRLSEEQELQLREKLIHNI 868          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_AZOBR (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Azospirillum brasilense GN=glnD PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 4.048e-7
Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = 1
Query:    1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRI 240
            PRV+IDNNA    TVI V+  ++ G+L ++ + LT++ L I+ A IS+ G   +DVF V D  G K+  +  +  I+ R+
Sbjct:  845 PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFGLKVTHENKLAQIRERL 924          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_GLUOX (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Gluconobacter oxydans (strain 621H) GN=glnD PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 4.473e-7
Identity = 47/174 (27.01%), Postives = 79/174 (45.40%), Query Frame = 1
Query:   73 GILLEVVQVLTDMNLTITKAYISS-DGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETS-AGFVPSRRG--------------SVGVMP--------AEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVL 522
            G+  ++   L     +I  A I +   G  +D F V D +G    +   +  +   +E + +G +  R+G              ++ V P        ++ HT IE+ G DRPGLL +V + L+     + +A I T+  RA  V +V  D +G  I+DP RL+ ++E L   L
Sbjct:  767 GLFSQIAGALAVSGASIVDARIHTLSDGMALDTFWVQDGEGCSFEEPHQLGRLNHLVEQALSGRLDIRKGIEDASHHSTSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYVR-DLLGMKITDPVRLARLRETLLASL 939          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A059B4N8_EUCGR0.000e+076.35Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
I1N7U8_SOYBN0.000e+076.46Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
V7CXR8_PHAVU0.000e+076.69Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
U5GV64_POPTR0.000e+083.59Uncharacterized protein OS=Populus trichocarpa GN=... [more]
A0A0D2Q388_GOSRA0.000e+090.48Uncharacterized protein OS=Gossypium raimondii GN=... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
GLND_RHOPA3.094e-736.25Bifunctional uridylyltransferase/uridylyl-removing... [more]
GLND_VIBVY3.898e-724.62Bifunctional uridylyltransferase/uridylyl-removing... [more]
GLND_VIBVU3.932e-724.62Bifunctional uridylyltransferase/uridylyl-removing... [more]
GLND_AZOBR4.048e-738.75Bifunctional uridylyltransferase/uridylyl-removing... [more]
GLND_GLUOX4.473e-727.01Bifunctional uridylyltransferase/uridylyl-removing... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002912ACT domainPFAMPF01842ACTcoord: 77..124
e-value: 1.9E-9
score: 37.0
IPR002912ACT domainPROSITEPS51671ACTcoord: 77..161
score: 11.908
IPR002912ACT domainPROSITEPS51671ACTcoord: 291..370
score: 11.87
IPR002912ACT domainPROSITEPS51671ACTcoord: 1..67
score: 7.074
NoneNo IPR availableGENE3D3.30.70.260coord: 287..357
e-value: 1.0E-9
score: 37.7
coord: 72..145
e-value: 9.1E-19
score: 66.8
NoneNo IPR availablePANTHERPTHR31096FAMILY NOT NAMEDcoord: 1..402
NoneNo IPR availablePANTHERPTHR31096:SF22ACR6coord: 1..402
NoneNo IPR availableSUPERFAMILY55021ACT-likecoord: 2..50
NoneNo IPR availableSUPERFAMILY55021ACT-likecoord: 287..357
NoneNo IPR availableSUPERFAMILY55021ACT-likecoord: 72..146

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0015123 ID=g.arboreum_cottongen_reftransV1_0015123; Name=g.arboreum_cottongen_reftransV1_0015123; organism=Gossypium arboreum; type=contig; length=1529bp
CCCAGAGTTGTGATTGACAACAATGCTTGTGAGGATGCCACTGTTATCCA
TGTTGACAGTGTCAACAAACATGGGATTCTCCTGGAAGTTGTCCAAGTGC
TTACAGATATGAATCTTACAATAACAAAGGCATACATATCATCTGATGGA
GGATGGTTTATGGATGTCTTTAATGTTGTTGACAATGATGGCAACAAAAT
CAGAGATAAGGAAGTTATGGACTATATTCAGAGTAGAATTGAAACTAGTG
CTGGCTTTGTGCCATCACGGAGAGGCTCCGTAGGCGTGATGCCTGCAGAA
GAGCATACATCGATTGAACTTGCTGGCACTGATAGGCCTGGTCTATTATC
TGAAGTATGTGCAGTTCTTGCTGACCTCCATTGCAATGTTGTAAATGCTG
AGATATGGACCCATAATGCTAGGGCAGCTGCCGTAGTTCATGTGACAGAT
GATTCAATGGGCTGCGCAATCAGTGATCCAAAACGTCTCTCAACGATAAA
GGAATTGCTTTGTAATGTTCTCAAAGGAAGTGATGACTTGAAAACTGCAA
AGACAACACTTTCAGCTCCAGGTGTTATGCACAGGGAGAGAAGGTTGCAT
CAAATCATGTTCGCAGACAGGGACTATGAAAGGGTCGAGAAAGCAGGAGT
TAGGGCGGTAGAGGAAGGGAGTTCAAGACCTCAAGTCACTCTGTTGAATA
TCGAGAAAGATTACACTGTTATTACCATGAGGTCAAAAGATAGGCCGAAA
CTATTGTTTGATATAGTCTGCACTCTCACAGATATGCAATATGTTGTTTT
TCATGGAATGGTGAACACAGGAAGGATCGAAGCTTATCAGGAATTCTACA
TCAGACATGTAGATGGGCTCCCCATTAGCTCGGAAGCTGAGCGTGTTCGT
GTTATTCAATGTCTAGAAGCAGCCATTGAGAGGAGGGCATCTGAGGGGCT
GGAACTAGAATTGTGCACAGACGACAGACTTGGACTCCTGTCTGACATCA
CCCGTATATTCCGGGAAAACAGCTTGTGTATCAGGAGAGCATTAATTTCA
ACAAAGAGTGGCAAGGCCAAGGACACCTTCTATGTCACAGACGTGACAGG
AAATCTAGTTGATCCCAAGATCATCGATTCTATCCGTGCACAGATTGGAC
ATACCGCATTACAGGTGAAACGTAACTCAAGTCTTGCACCAAAACCACCT
CATCAGGAGACAACAATGGGTCATTTCTTTGGAAATCTATTCAAAGCTCG
AACTTTTCAGAATTTCAAGTTAATCAGATCTTACTCTTGAGACATCTCCT
CCTCTTTTAAGTAGATATATTTGTACAGGAATATCAGATATTAAACCAAA
AGATATACATAGGGAGAAAACACTGTAAATATTTAGCTTCTCCCTTGCTT
GGTTACCAATGTCCTGATACTGCAAAGGAAAAGAAAAAAAATCAGCCAGT
CACTATACTGTAAAAGTTACTGCTGGTATTTGTATATCTTCACTGTATCT
ATTGTAAGTAACATTTGTATAGTTTAATA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002912ACT_dom
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016597amino acid binding