g.arboreum_cottongen_reftransV1_0015123, g.arboreum_cottongen_reftransV1_0015123 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: A0A059B4N8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03350 PE=4 SV=1) HSP 1 Score: 677.937 bits (1748), Expect = 0.000e+0 Identity = 326/427 (76.35%), Postives = 370/427 (86.65%), Query Frame = 1 Query: 1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSRPQVTLLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAKDTFYVTDVTGNLVDPKIIDSIRAQIGHTALQVKRNSSLAPKPPHQETTMGHFFGNLFKARTFQNFKLIR 1278 PRVVIDN +CEDATVI VDS+NKHGILLEVVQVL DMNLTITKAYISSDGGWFMDVFNV+D DG KI++KEV++YI+ R+E++A PS R SVG MP+ EHTSIEL+GTDRPGLLSEVCAVL DLHCNVVNAEIWTHNARAAAVVHVTDD+ G AI DPKRL+TI++LLCNVLK D+ TAK TLS+PGV +R RRLHQIMFADRDYERV+K +R + + S+RP VT+++ EKDYT++TMRSKDRPKLLFDI+CTLTDMQYVVFHGMVNTGR EAYQEFYIRHVDGLPI SEAER R+ QCLEAAIERRASEGLELELC +DR+GLL+D+TR+FREN LC++RA ISTK GKAKDTFYV+DVTG+ VD KIIDSIR QI + LQVK NS L PK P QETT G FGN F+ R FQNFKL+R Sbjct: 15 PRVVIDNKSCEDATVIQVDSINKHGILLEVVQVLIDMNLTITKAYISSDGGWFMDVFNVIDCDGKKIKEKEVIEYIKRRLESNASISPSFRESVGFMPSNEHTSIELSGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNARAAAVVHVTDDTTGHAIKDPKRLATIRDLLCNVLKADGDVNTAKMTLSSPGVTNRGRRLHQIMFADRDYERVDKEEIRRMHDNSTRPFVTVMDCYEKDYTIVTMRSKDRPKLLFDIICTLTDMQYVVFHGMVNTGRKEAYQEFYIRHVDGLPIGSEAERERITQCLEAAIERRASEGLELELCAEDRVGLLADVTRLFRENGLCVKRAEISTKDGKAKDTFYVSDVTGSPVDLKIIDSIRRQIVPSVLQVKHNSLLLPKKP-QETTGGFLFGNFFRTRNFQNFKLVR 440
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: I1N7U8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0 Identity = 328/429 (76.46%), Postives = 373/429 (86.95%), Query Frame = 1 Query: 1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSR--PQVTLLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAKDTFYVTDVTGNLVDPKIIDSIRAQIGHTALQVKRNSSLAPKPPHQETTMGHFFGNLFKARTFQNFKLIR 1278 PRVVIDNNACE+ATVI VDSVNKHGILL+VVQV++DMNL ITKAYISSDG WFMDVFNV+D+ GNKIRDKEV+DYIQ R+E + FVPS R SVGV+P EEHT IEL GTDRPGLLSE+CAVL DLHCNVV AEIWTHN RAAAVVHVTDDS GCAI DP RLSTI++LL NVL+GS+D KTA+TTLS GV +R+RRLHQIMFADRDYER+E+AG + + R P VT+ + +EKDYTV+TMR++DRPKLLFDIVCTLTDMQYVVFHG+V T R+EA+QEFYIRHVDG PISSEAER R++QCLEAAIERRASEG+ LELCT+DR+GLLSDITR FRENSLCI+RA IST+ GKA+DTFYVTDVTGN VDPKIIDSIR QIG L+VK NS+L+PKPP Q TT+G GN FKAR+FQNFKLI+ Sbjct: 15 PRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISSDGVWFMDVFNVIDHKGNKIRDKEVIDYIQRRLENNPSFVPSLRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTIRDLLSNVLRGSNDPKTARTTLSPHGVTNRDRRLHQIMFADRDYERIERAGQEELRDRDKRPLPHVTVGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAFQEFYIRHVDGFPISSEAERERLMQCLEAAIERRASEGMGLELCTEDRVGLLSDITRTFRENSLCIKRAEISTEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPP-QPTTIGFLLGNFFKARSFQNFKLIK 442
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: V7CXR8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G089200g PE=4 SV=1) HSP 1 Score: 675.241 bits (1741), Expect = 0.000e+0 Identity = 329/429 (76.69%), Postives = 368/429 (85.78%), Query Frame = 1 Query: 1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSR--PQVTLLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAKDTFYVTDVTGNLVDPKIIDSIRAQIGHTALQVKRNSSLAPKPPHQETTMGHFFGNLFKARTFQNFKLIR 1278 PRVVIDNNACE+ATVI VDSVNKHGILL+VVQV++DMNL ITKAYISSDG WFMDVFNV+D +GNKIRDKEV+DYIQ RIE + F PS R SVGV+P EEHT IEL GTDRPGLLSE+CAVL DLHCNVV AEIWTHN RAAAVVHVTDDS GCAI DP RLSTI++LL NVL+GS+D KTAKTTLS PGV +R+RRLHQIMFADRDYER+E+ G A+ + R P VT+++ ++KDYTV+TMR+ DRPKLLFDIVCTLTDMQYVVFHG+V T R EA+QEFYIRHVDG PIS EAER R++QCLEAAIERRASEG+ELELCT DR+GLLSDITRIFRENSLCI+RA IST+ G A+DTFYVTDVTGN VDPKIIDSIR QIG L VK NSSL+PK Q TT+G GN FKAR+FQNFKLIR Sbjct: 15 PRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISSDGVWFMDVFNVIDRNGNKIRDKEVIDYIQRRIENNPSFAPSLRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTIRDLLSNVLRGSNDPKTAKTTLSPPGVTNRDRRLHQIMFADRDYERIEREGRGALRDRGKRPLPHVTVVDCVDKDYTVVTMRATDRPKLLFDIVCTLTDMQYVVFHGVVKTVRTEAFQEFYIRHVDGFPISLEAERERLVQCLEAAIERRASEGMELELCTKDRVGLLSDITRIFRENSLCIKRAEISTEEGMARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLNVKHNSSLSPK-ASQPTTIGFLLGNFFKARSFQNFKLIR 442
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: U5GV64_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s33460g PE=4 SV=1) HSP 1 Score: 674.085 bits (1738), Expect = 0.000e+0 Identity = 326/390 (83.59%), Postives = 351/390 (90.00%), Query Frame = 1 Query: 109 MNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSRPQVTLLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAKDTFYVTDVTGNLVDPKIIDSIRAQIGHTALQVKRNSSLAPKPPHQETTMGHFFGNLFKARTFQNFKLIR 1278 MNL ITKAYISSDG WFMDVFNVVD DG KIRDKEVMDYIQ R+E++A F PS RGSVGVMP+EEHT+IEL GTDRPGLLSEVCAVL DLHCNVVNAEIWTHN RAAAVVHVTDDS GCAI DPKRLSTI+ELLCNVLKG+DD KTA TTLS PGV RERRLHQIMFADRDYERVE+AG+ E+ SSRP VT+LNIE+DYTV++MRSKDRPKLLFDIVCTLTDM+YVVFHGMV+TGR+EAYQEFYIRHVDGLP+SS+AER RV+QCLEAAIERRASEGLELELCT+DR+GLLSDITRIFRENSLCI+RA I TK GKAKDTFYVTDVTGN VDPKIIDSI QIG T L VKRNS L+PKPP QETTMG+ FGNLFKART FKLIR Sbjct: 1 MNLVITKAYISSDGDWFMDVFNVVDQDGKKIRDKEVMDYIQRRLESNASFAPSLRGSVGVMPSEEHTAIELTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTIRELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSSRPHVTVLNIERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRHVDGLPVSSDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIKRAEILTKGGKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPP-QETTMGYIFGNLFKART---FKLIR 386
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: A0A0D2Q388_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G043900 PE=4 SV=1) HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0 Identity = 323/357 (90.48%), Postives = 340/357 (95.24%), Query Frame = 1 Query: 1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSRPQVTLLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAK 1071 PRVVIDNNACEDATVI VDSVNKHGILLEVVQVLTDMNLTI KAYI+SDGGWFMDVFNVVDNDGNKIRDKE++DYIQ RIETSAGFVPS+RGSVGVMP+EEHTSIELAGTDRPGLLSEVCAVLADL CNVVNAEIWTHN RAAAVVHVTDDS GCAI+DPKRL IK+LLCNVLKG+DDLKTAKT LSAPGVMHRERRLHQIMFADRDYERVEK GVRAVEE SS+PQV LLNIEKDYTVITMR+KDRPKLLFDI+CTLTDMQYVVFHGMVNT R++A QEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCT+DRLGLLSDITRIFRENSLCI+RALISTK + + Sbjct: 15 PRVVIDNNACEDATVIQVDSVNKHGILLEVVQVLTDMNLTIRKAYIASDGGWFMDVFNVVDNDGNKIRDKEIIDYIQRRIETSAGFVPSQRGSVGVMPSEEHTSIELAGTDRPGLLSEVCAVLADLRCNVVNAEIWTHNTRAAAVVHVTDDSTGCAITDPKRLLMIKDLLCNVLKGNDDLKTAKTMLSAPGVMHRERRLHQIMFADRDYERVEKTGVRAVEERSSKPQVNLLNIEKDYTVITMRAKDRPKLLFDIICTLTDMQYVVFHGMVNTTRMDANQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTEDRLGLLSDITRIFRENSLCIKRALISTKGDRPE 371
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_RHOPA (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=glnD PE=3 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 3.094e-7 Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 295 AEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSD 534 ++ +T IE++G DRPGLL ++ ++ L+ N+ +A + T RA V +VT D +G I+ P R + IK L ++L D Sbjct: 844 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQITAPTRQAAIKRALVHLLANGD 922
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_VIBVY (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Vibrio vulnificus (strain YJ016) GN=glnD PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 3.898e-7 Identity = 49/199 (24.62%), Postives = 88/199 (44.22%), Query Frame = 1 Query: 1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYI-SSDGGWFMDVFNVVDNDGNKI---RDKEVMDYI----------------------QSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNV 519 P V++ A T + V + ++H + VV L N + A I SS G+ +D F V+D G I K V+ ++ +++T F+P++ +++ T +EL D PGLL+ A AD+ N+ A+I T RA + +T ++ G +S+ + L ++L+ N+ Sbjct: 679 PLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKDGYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVLTDGRPTKVKTRRTPYKLQHFKVKTKVDFLPTK--------SKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSEN-GGRLSEEQELQLREKLIHNI 868
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_VIBVU (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Vibrio vulnificus (strain CMCP6) GN=glnD PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 3.932e-7 Identity = 49/199 (24.62%), Postives = 88/199 (44.22%), Query Frame = 1 Query: 1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYI-SSDGGWFMDVFNVVDNDGNKI---RDKEVMDYI----------------------QSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNV 519 P V++ A T + V + ++H + VV L N + A I SS G+ +D F V+D G I K V+ ++ +++T F+P++ +++ T +EL D PGLL+ A AD+ N+ A+I T RA + +T ++ G +S+ + L ++L+ N+ Sbjct: 679 PLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKDGYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVLADGRPTKVKTRRTPYKLQHFKVKTKVDFLPTK--------SKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSEN-GGRLSEEQELQLREKLIHNI 868
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_AZOBR (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Azospirillum brasilense GN=glnD PE=1 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 4.048e-7 Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRI 240 PRV+IDNNA TVI V+ ++ G+L ++ + LT++ L I+ A IS+ G +DVF V D G K+ + + I+ R+ Sbjct: 845 PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFGLKVTHENKLAQIRERL 924
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_GLUOX (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Gluconobacter oxydans (strain 621H) GN=glnD PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 4.473e-7 Identity = 47/174 (27.01%), Postives = 79/174 (45.40%), Query Frame = 1 Query: 73 GILLEVVQVLTDMNLTITKAYISS-DGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETS-AGFVPSRRG--------------SVGVMP--------AEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVL 522 G+ ++ L +I A I + G +D F V D +G + + + +E + +G + R+G ++ V P ++ HT IE+ G DRPGLL +V + L+ + +A I T+ RA V +V D +G I+DP RL+ ++E L L Sbjct: 767 GLFSQIAGALAVSGASIVDARIHTLSDGMALDTFWVQDGEGCSFEEPHQLGRLNHLVEQALSGRLDIRKGIEDASHHSTSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYVR-DLLGMKITDPVRLARLRETLLASL 939 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pages
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0015123 ID=g.arboreum_cottongen_reftransV1_0015123; Name=g.arboreum_cottongen_reftransV1_0015123; organism=Gossypium arboreum; type=contig; length=1529bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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