g.arboreum_cottongen_reftransV1_0015123, g.arboreum_cottongen_reftransV1_0015123 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0015123
Unique Nameg.arboreum_cottongen_reftransV1_0015123
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1529
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr12chromosomeg.arboreum_cottongen_reftransV1_0015123:3..1529 .
Chr12:55260877..55263082 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: A0A059B4N8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03350 PE=4 SV=1)

HSP 1 Score: 677.937 bits (1748), Expect = 0.000e+0
Identity = 326/427 (76.35%), Postives = 370/427 (86.65%), Query Frame = 1
Query:    1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSRPQVTLLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAKDTFYVTDVTGNLVDPKIIDSIRAQIGHTALQVKRNSSLAPKPPHQETTMGHFFGNLFKARTFQNFKLIR 1278
            PRVVIDN +CEDATVI VDS+NKHGILLEVVQVL DMNLTITKAYISSDGGWFMDVFNV+D DG KI++KEV++YI+ R+E++A   PS R SVG MP+ EHTSIEL+GTDRPGLLSEVCAVL DLHCNVVNAEIWTHNARAAAVVHVTDD+ G AI DPKRL+TI++LLCNVLK   D+ TAK TLS+PGV +R RRLHQIMFADRDYERV+K  +R + + S+RP VT+++  EKDYT++TMRSKDRPKLLFDI+CTLTDMQYVVFHGMVNTGR EAYQEFYIRHVDGLPI SEAER R+ QCLEAAIERRASEGLELELC +DR+GLL+D+TR+FREN LC++RA ISTK GKAKDTFYV+DVTG+ VD KIIDSIR QI  + LQVK NS L PK P QETT G  FGN F+ R FQNFKL+R
Sbjct:   15 PRVVIDNKSCEDATVIQVDSINKHGILLEVVQVLIDMNLTITKAYISSDGGWFMDVFNVIDCDGKKIKEKEVIEYIKRRLESNASISPSFRESVGFMPSNEHTSIELSGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNARAAAVVHVTDDTTGHAIKDPKRLATIRDLLCNVLKADGDVNTAKMTLSSPGVTNRGRRLHQIMFADRDYERVDKEEIRRMHDNSTRPFVTVMDCYEKDYTIVTMRSKDRPKLLFDIICTLTDMQYVVFHGMVNTGRKEAYQEFYIRHVDGLPIGSEAERERITQCLEAAIERRASEGLELELCAEDRVGLLADVTRLFRENGLCVKRAEISTKDGKAKDTFYVSDVTGSPVDLKIIDSIRRQIVPSVLQVKHNSLLLPKKP-QETTGGFLFGNFFRTRNFQNFKLVR 440          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: I1N7U8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0
Identity = 328/429 (76.46%), Postives = 373/429 (86.95%), Query Frame = 1
Query:    1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSR--PQVTLLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAKDTFYVTDVTGNLVDPKIIDSIRAQIGHTALQVKRNSSLAPKPPHQETTMGHFFGNLFKARTFQNFKLIR 1278
            PRVVIDNNACE+ATVI VDSVNKHGILL+VVQV++DMNL ITKAYISSDG WFMDVFNV+D+ GNKIRDKEV+DYIQ R+E +  FVPS R SVGV+P EEHT IEL GTDRPGLLSE+CAVL DLHCNVV AEIWTHN RAAAVVHVTDDS GCAI DP RLSTI++LL NVL+GS+D KTA+TTLS  GV +R+RRLHQIMFADRDYER+E+AG   + +   R  P VT+ + +EKDYTV+TMR++DRPKLLFDIVCTLTDMQYVVFHG+V T R+EA+QEFYIRHVDG PISSEAER R++QCLEAAIERRASEG+ LELCT+DR+GLLSDITR FRENSLCI+RA IST+ GKA+DTFYVTDVTGN VDPKIIDSIR QIG   L+VK NS+L+PKPP Q TT+G   GN FKAR+FQNFKLI+
Sbjct:   15 PRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISSDGVWFMDVFNVIDHKGNKIRDKEVIDYIQRRLENNPSFVPSLRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTIRDLLSNVLRGSNDPKTARTTLSPHGVTNRDRRLHQIMFADRDYERIERAGQEELRDRDKRPLPHVTVGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAFQEFYIRHVDGFPISSEAERERLMQCLEAAIERRASEGMGLELCTEDRVGLLSDITRTFRENSLCIKRAEISTEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPP-QPTTIGFLLGNFFKARSFQNFKLIK 442          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: V7CXR8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G089200g PE=4 SV=1)

HSP 1 Score: 675.241 bits (1741), Expect = 0.000e+0
Identity = 329/429 (76.69%), Postives = 368/429 (85.78%), Query Frame = 1
Query:    1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSR--PQVTLLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAKDTFYVTDVTGNLVDPKIIDSIRAQIGHTALQVKRNSSLAPKPPHQETTMGHFFGNLFKARTFQNFKLIR 1278
            PRVVIDNNACE+ATVI VDSVNKHGILL+VVQV++DMNL ITKAYISSDG WFMDVFNV+D +GNKIRDKEV+DYIQ RIE +  F PS R SVGV+P EEHT IEL GTDRPGLLSE+CAVL DLHCNVV AEIWTHN RAAAVVHVTDDS GCAI DP RLSTI++LL NVL+GS+D KTAKTTLS PGV +R+RRLHQIMFADRDYER+E+ G  A+ +   R  P VT+++ ++KDYTV+TMR+ DRPKLLFDIVCTLTDMQYVVFHG+V T R EA+QEFYIRHVDG PIS EAER R++QCLEAAIERRASEG+ELELCT DR+GLLSDITRIFRENSLCI+RA IST+ G A+DTFYVTDVTGN VDPKIIDSIR QIG   L VK NSSL+PK   Q TT+G   GN FKAR+FQNFKLIR
Sbjct:   15 PRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISSDGVWFMDVFNVIDRNGNKIRDKEVIDYIQRRIENNPSFAPSLRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTIRDLLSNVLRGSNDPKTAKTTLSPPGVTNRDRRLHQIMFADRDYERIEREGRGALRDRGKRPLPHVTVVDCVDKDYTVVTMRATDRPKLLFDIVCTLTDMQYVVFHGVVKTVRTEAFQEFYIRHVDGFPISLEAERERLVQCLEAAIERRASEGMELELCTKDRVGLLSDITRIFRENSLCIKRAEISTEEGMARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLNVKHNSSLSPK-ASQPTTIGFLLGNFFKARSFQNFKLIR 442          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: U5GV64_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s33460g PE=4 SV=1)

HSP 1 Score: 674.085 bits (1738), Expect = 0.000e+0
Identity = 326/390 (83.59%), Postives = 351/390 (90.00%), Query Frame = 1
Query:  109 MNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSRPQVTLLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAKDTFYVTDVTGNLVDPKIIDSIRAQIGHTALQVKRNSSLAPKPPHQETTMGHFFGNLFKARTFQNFKLIR 1278
            MNL ITKAYISSDG WFMDVFNVVD DG KIRDKEVMDYIQ R+E++A F PS RGSVGVMP+EEHT+IEL GTDRPGLLSEVCAVL DLHCNVVNAEIWTHN RAAAVVHVTDDS GCAI DPKRLSTI+ELLCNVLKG+DD KTA TTLS PGV  RERRLHQIMFADRDYERVE+AG+   E+ SSRP VT+LNIE+DYTV++MRSKDRPKLLFDIVCTLTDM+YVVFHGMV+TGR+EAYQEFYIRHVDGLP+SS+AER RV+QCLEAAIERRASEGLELELCT+DR+GLLSDITRIFRENSLCI+RA I TK GKAKDTFYVTDVTGN VDPKIIDSI  QIG T L VKRNS L+PKPP QETTMG+ FGNLFKART   FKLIR
Sbjct:    1 MNLVITKAYISSDGDWFMDVFNVVDQDGKKIRDKEVMDYIQRRLESNASFAPSLRGSVGVMPSEEHTAIELTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTIRELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSSRPHVTVLNIERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRHVDGLPVSSDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIKRAEILTKGGKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPP-QETTMGYIFGNLFKART---FKLIR 386          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Match: A0A0D2Q388_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G043900 PE=4 SV=1)

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 323/357 (90.48%), Postives = 340/357 (95.24%), Query Frame = 1
Query:    1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDNDGNKIRDKEVMDYIQSRIETSAGFVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLSAPGVMHRERRLHQIMFADRDYERVEKAGVRAVEEGSSRPQVTLLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRIEAYQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTDDRLGLLSDITRIFRENSLCIRRALISTKSGKAK 1071
            PRVVIDNNACEDATVI VDSVNKHGILLEVVQVLTDMNLTI KAYI+SDGGWFMDVFNVVDNDGNKIRDKE++DYIQ RIETSAGFVPS+RGSVGVMP+EEHTSIELAGTDRPGLLSEVCAVLADL CNVVNAEIWTHN RAAAVVHVTDDS GCAI+DPKRL  IK+LLCNVLKG+DDLKTAKT LSAPGVMHRERRLHQIMFADRDYERVEK GVRAVEE SS+PQV LLNIEKDYTVITMR+KDRPKLLFDI+CTLTDMQYVVFHGMVNT R++A QEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCT+DRLGLLSDITRIFRENSLCI+RALISTK  + +
Sbjct:   15 PRVVIDNNACEDATVIQVDSVNKHGILLEVVQVLTDMNLTIRKAYIASDGGWFMDVFNVVDNDGNKIRDKEIIDYIQRRIETSAGFVPSQRGSVGVMPSEEHTSIELAGTDRPGLLSEVCAVLADLRCNVVNAEIWTHNTRAAAVVHVTDDSTGCAITDPKRLLMIKDLLCNVLKGNDDLKTAKTMLSAPGVMHRERRLHQIMFADRDYERVEKTGVRAVEERSSKPQVNLLNIEKDYTVITMRAKDRPKLLFDIICTLTDMQYVVFHGMVNTTRMDANQEFYIRHVDGLPISSEAERVRVIQCLEAAIERRASEGLELELCTEDRLGLLSDITRIFRENSLCIKRALISTKGDRPE 371          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_BRADU (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=glnD PE=3 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 1.853e-8
Identity = 32/85 (37.65%), Postives = 51/85 (60.00%), Query Frame = 1
Query:  295 AEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTA 549
            ++ +T IE++G DRPGLL E+   ++ L+ N+ +A + T   RA  V +VT D +G  I+ P R S IK  L +V+ G   ++ A
Sbjct:  845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQINAPTRQSAIKSALTHVMAGDKAVQPA 928          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: ACR11_ARATH (ACT domain-containing protein ACR11 OS=Arabidopsis thaliana GN=ACR11 PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.061e-8
Identity = 48/175 (27.43%), Postives = 79/175 (45.14%), Query Frame = 1
Query:    1 PRVVIDNNACEDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWFMDVFNVVDND-GNKIRDKEVMDYIQ-SRIETSAGFVPSRR------GSVGVMPAEE--------HTSIE----------LAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVT 447
            P V+ID ++  DATV+ V   ++ G LL+ +  L ++ L + KA +  D     + F +   D G K+ D E+++ I+ + I     F P          + GV+P  E        H +IE          +   DRPGLL E+  +++D+   V + E  T    A    HV+
Sbjct:   84 PVVIIDQDSDPDATVLEVTFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAITRADSGRKVEDPELLEAIRLTVINNLLEFHPESSSQLAMGAAFGVLPPTEPIDVDIATHITIEDDGPDRSLLFIESADRPGLLVELVKIISDISVAVESGEFDTEGLLAKVKFHVS 258          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_NITHX (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=glnD PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 9.168e-8
Identity = 30/76 (39.47%), Postives = 48/76 (63.16%), Query Frame = 1
Query:  295 AEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVL 522
            ++ HT IE++G DRPGLL ++ A ++ L+ N+ +A + T   RA  V +VT D +G  I+ P R + IK  L ++L
Sbjct:  846 SDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVT-DLLGARITAPTRQAAIKRALIHLL 920          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_BRASO (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Bradyrhizobium sp. (strain ORS278) GN=glnD PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 9.739e-8
Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = 1
Query:  277 SVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSD 534
            S+    +E +T IE++G DRPGLL E+   ++ L+ N+ +A + T   RA  V +VT D +G  I+ P R + IK  L ++L   D
Sbjct:  840 SINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQINAPTRQAAIKSALLHLLASED 924          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_BRASB (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=glnD PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 9.908e-8
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 1
Query:  277 SVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDD 537
            S+    +E +T IE++G DRPGLL E+   ++ L+ N+ +A + T   RA  V +VT D +G  I+ P R + IK  L ++L  SDD
Sbjct:  840 SINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGAQINAPTRQAAIKSALLHLL-ASDD 924          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_PSEPK (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Pseudomonas putida (strain KT2440) GN=glnD PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.497e-7
Identity = 49/199 (24.62%), Postives = 88/199 (44.22%), Query Frame = 1
Query:   31 EDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWF-MDVFNVVDNDGNKIRD-----KEVMDYIQSRIETSAGF-------VPSRRGSVGVMP-------AEEHTSI-ELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLS 564
            E  T I + + ++H      V  ++ +NL I  A I +    F +D + V+DNDG  I D     K++ D +   +     +       VP +       P       A+   +I E+   DRPGLL+ +  +  +   ++ NA+I T   R   V  +T D+    +SDP+  S ++E +   L+      T++T ++
Sbjct:  702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQPLSDPQLCSRLQEAIVQQLQAGQGSDTSQTRVT 899          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_PSEP1 (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=glnD PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.660e-7
Identity = 49/199 (24.62%), Postives = 88/199 (44.22%), Query Frame = 1
Query:   31 EDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWF-MDVFNVVDNDGNKIRD-----KEVMDYIQSRIETSAGF-------VPSRRGSVGVMP-------AEEHTSI-ELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLS 564
            E  T I + + ++H      V  ++ +NL I  A I +    F +D + V+DNDG  I D     K++ D +   +     +       VP +       P       A+   +I E+   DRPGLL+ +  +  +   ++ NA+I T   R   V  +T D+    +SDP+  S ++E +   L+      T++T ++
Sbjct:  702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQPLSDPQLCSRLQEAIVQQLQAGQGSDTSQTRVT 899          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_NITWN (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=glnD PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.810e-7
Identity = 31/93 (33.33%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  256 FVPSRRGSVGVMPAEEHTSIELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSD 534
            FV   + ++    ++ HT IE++G DRPGLL ++   ++ L+ N+ +A + T   RA  V +VT D +G  I+ P R + IK  L ++L   +
Sbjct:  831 FVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT-DLLGARITAPTRQAAIKRALVHLLASGN 922          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_PSEPG (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Pseudomonas putida (strain GB-1) GN=glnD PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.469e-7
Identity = 49/199 (24.62%), Postives = 87/199 (43.72%), Query Frame = 1
Query:   31 EDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWF-MDVFNVVDNDGNKIRD-----KEVMDYIQSRIETSAGF-------VPSRRGSVGVMP-------AEEHTSI-ELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGSDDLKTAKTTLS 564
            E  T I + + ++H      V  ++ +NL I  A I +    F +D + V+DNDG  I D     K++ D +   +     +       VP +       P       A+   +I E+   DRPGLL+ +  +  +   ++ NA+I T   R   V  +T D+    +SDP+  S ++E +   L+      T+ T ++
Sbjct:  702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT-DADNQPLSDPQLCSRLQEAIVQQLQAGQGSDTSPTRVT 899          
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Match: GLND_PSEE4 (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Pseudomonas entomophila (strain L48) GN=glnD PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.578e-7
Identity = 48/188 (25.53%), Postives = 82/188 (43.62%), Query Frame = 1
Query:   31 EDATVIHVDSVNKHGILLEVVQVLTDMNLTITKAYISSDGGWF-MDVFNVVDNDGNKIRD-----KEVMDYIQSRIETSAGF-------VPSRRGSVGVMP-------AEEHTSI-ELAGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSMGCAISDPKRLSTIKELLCNVLKGS 531
            E  T I + + ++H      V  +  +NL I  A I +    F +D + V+DNDG  I D     K++ D +   + T   +       VP +       P       A+   +I E+   DRPGLL+ +  +  +   ++ NA+I T   R   V  +T D+    +SDP+  S ++E +   L+  
Sbjct:  702 EGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNPQRVKQIRDGLTEALRTPEDYPAIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFIT-DADNQPLSDPQLCSRLQEAIIQQLQAG 888          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A059B4N8_EUCGR0.000e+076.35Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
I1N7U8_SOYBN0.000e+076.46Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
V7CXR8_PHAVU0.000e+076.69Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
U5GV64_POPTR0.000e+083.59Uncharacterized protein OS=Populus trichocarpa GN=... [more]
A0A0D2Q388_GOSRA0.000e+090.48Uncharacterized protein OS=Gossypium raimondii GN=... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0015123 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
GLND_BRADU1.853e-837.65Bifunctional uridylyltransferase/uridylyl-removing... [more]
ACR11_ARATH2.061e-827.43ACT domain-containing protein ACR11 OS=Arabidopsis... [more]
GLND_NITHX9.168e-839.47Bifunctional uridylyltransferase/uridylyl-removing... [more]
GLND_BRASO9.739e-837.21Bifunctional uridylyltransferase/uridylyl-removing... [more]
GLND_BRASB9.908e-839.08Bifunctional uridylyltransferase/uridylyl-removing... [more]
GLND_PSEPK1.497e-724.62Bifunctional uridylyltransferase/uridylyl-removing... [more]
GLND_PSEP11.660e-724.62Bifunctional uridylyltransferase/uridylyl-removing... [more]
GLND_NITWN1.810e-733.33Bifunctional uridylyltransferase/uridylyl-removing... [more]
GLND_PSEPG2.469e-724.62Bifunctional uridylyltransferase/uridylyl-removing... [more]
GLND_PSEE42.578e-725.53Bifunctional uridylyltransferase/uridylyl-removing... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002912ACT domainPFAMPF01842ACTcoord: 77..124
e-value: 1.9E-9
score: 37.0
IPR002912ACT domainPROSITEPS51671ACTcoord: 77..161
score: 11.908
IPR002912ACT domainPROSITEPS51671ACTcoord: 291..370
score: 11.87
IPR002912ACT domainPROSITEPS51671ACTcoord: 1..67
score: 7.074
NoneNo IPR availableGENE3D3.30.70.260coord: 287..357
e-value: 1.0E-9
score: 37.7
coord: 72..145
e-value: 9.1E-19
score: 66.8
NoneNo IPR availablePANTHERPTHR31096FAMILY NOT NAMEDcoord: 1..402
NoneNo IPR availablePANTHERPTHR31096:SF22ACR6coord: 1..402
NoneNo IPR availableSUPERFAMILY55021ACT-likecoord: 2..50
NoneNo IPR availableSUPERFAMILY55021ACT-likecoord: 287..357
NoneNo IPR availableSUPERFAMILY55021ACT-likecoord: 72..146

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0015123 ID=g.arboreum_cottongen_reftransV1_0015123; Name=g.arboreum_cottongen_reftransV1_0015123; organism=Gossypium arboreum; type=contig; length=1529bp
CCCAGAGTTGTGATTGACAACAATGCTTGTGAGGATGCCACTGTTATCCA
TGTTGACAGTGTCAACAAACATGGGATTCTCCTGGAAGTTGTCCAAGTGC
TTACAGATATGAATCTTACAATAACAAAGGCATACATATCATCTGATGGA
GGATGGTTTATGGATGTCTTTAATGTTGTTGACAATGATGGCAACAAAAT
CAGAGATAAGGAAGTTATGGACTATATTCAGAGTAGAATTGAAACTAGTG
CTGGCTTTGTGCCATCACGGAGAGGCTCCGTAGGCGTGATGCCTGCAGAA
GAGCATACATCGATTGAACTTGCTGGCACTGATAGGCCTGGTCTATTATC
TGAAGTATGTGCAGTTCTTGCTGACCTCCATTGCAATGTTGTAAATGCTG
AGATATGGACCCATAATGCTAGGGCAGCTGCCGTAGTTCATGTGACAGAT
GATTCAATGGGCTGCGCAATCAGTGATCCAAAACGTCTCTCAACGATAAA
GGAATTGCTTTGTAATGTTCTCAAAGGAAGTGATGACTTGAAAACTGCAA
AGACAACACTTTCAGCTCCAGGTGTTATGCACAGGGAGAGAAGGTTGCAT
CAAATCATGTTCGCAGACAGGGACTATGAAAGGGTCGAGAAAGCAGGAGT
TAGGGCGGTAGAGGAAGGGAGTTCAAGACCTCAAGTCACTCTGTTGAATA
TCGAGAAAGATTACACTGTTATTACCATGAGGTCAAAAGATAGGCCGAAA
CTATTGTTTGATATAGTCTGCACTCTCACAGATATGCAATATGTTGTTTT
TCATGGAATGGTGAACACAGGAAGGATCGAAGCTTATCAGGAATTCTACA
TCAGACATGTAGATGGGCTCCCCATTAGCTCGGAAGCTGAGCGTGTTCGT
GTTATTCAATGTCTAGAAGCAGCCATTGAGAGGAGGGCATCTGAGGGGCT
GGAACTAGAATTGTGCACAGACGACAGACTTGGACTCCTGTCTGACATCA
CCCGTATATTCCGGGAAAACAGCTTGTGTATCAGGAGAGCATTAATTTCA
ACAAAGAGTGGCAAGGCCAAGGACACCTTCTATGTCACAGACGTGACAGG
AAATCTAGTTGATCCCAAGATCATCGATTCTATCCGTGCACAGATTGGAC
ATACCGCATTACAGGTGAAACGTAACTCAAGTCTTGCACCAAAACCACCT
CATCAGGAGACAACAATGGGTCATTTCTTTGGAAATCTATTCAAAGCTCG
AACTTTTCAGAATTTCAAGTTAATCAGATCTTACTCTTGAGACATCTCCT
CCTCTTTTAAGTAGATATATTTGTACAGGAATATCAGATATTAAACCAAA
AGATATACATAGGGAGAAAACACTGTAAATATTTAGCTTCTCCCTTGCTT
GGTTACCAATGTCCTGATACTGCAAAGGAAAAGAAAAAAAATCAGCCAGT
CACTATACTGTAAAAGTTACTGCTGGTATTTGTATATCTTCACTGTATCT
ATTGTAAGTAACATTTGTATAGTTTAATA
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002912ACT_dom
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016597amino acid binding