g.arboreum_cottongen_reftransV1_0014616, g.arboreum_cottongen_reftransV1_0014616 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0014616
Unique Nameg.arboreum_cottongen_reftransV1_0014616
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length2068
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr1chromosomeg.arboreum_cottongen_reftransV1_0014616:1..2068 .
Chr1:137483326..137489164 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0D2RE32_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G000800 PE=4 SV=1)

HSP 1 Score: 644.81 bits (1662), Expect = 0.000e+0
Identity = 336/354 (94.92%), Postives = 338/354 (95.48%), Query Frame = -2
Query:  868 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQA 1929
            MEFEITDTKENENKERELVVPVLGASNLN GD PVSPPLQQHPSSPSP P    M ANSIT HTGHANA  NIQPHSTPAHHSTCLL VSNDQSSLKPD+ETTSNVKSESS IFHFKTHTDSTSDHI AAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG ELNIPISSQ+EAMNVDNQ 
Sbjct:    1 MEFEITDTKENENKERELVVPVLGASNLNGGDHPVSPPLQQHPSSPSPVP----MEANSITSHTGHANAGRNIQPHSTPAHHSTCLLPVSNDQSSLKPDVETTSNVKSESSSIFHFKTHTDSTSDHIQAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGAELNIPISSQAEAMNVDNQV 350          
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0D2MHA0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G000800 PE=4 SV=1)

HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0
Identity = 327/343 (95.34%), Postives = 328/343 (95.63%), Query Frame = -2
Query:  901 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISS 1929
            MEFEITDTKENENKERELVVPVLGASNLN GD PVSPPLQQHPSSPSP P    M ANSIT HTGHANA  NIQPHSTPAHHSTCLL VSNDQSSLKPD+ETTSNVKSESS IFHFKTHTDSTSDHI AAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG ELNIPISS
Sbjct:    1 MEFEITDTKENENKERELVVPVLGASNLNGGDHPVSPPLQQHPSSPSPVP----MEANSITSHTGHANAGRNIQPHSTPAHHSTCLLPVSNDQSSLKPDVETTSNVKSESSSIFHFKTHTDSTSDHIQAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGAELNIPISS 339          
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: M5VTY4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003469mg PE=4 SV=1)

HSP 1 Score: 538.88 bits (1387), Expect = 1.004e-180
Identity = 296/449 (65.92%), Postives = 334/449 (74.39%), Query Frame = -2
Query:  331 NDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSD-----HILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1659
            +D   +KP  E T++ K+E+  +     H     D     H   AE T  VKTE S V         + E+SSA+  + T          +   E +TP    SD +      E+LK+  N+ ++ T   NGN NS+  F LDD H SDGN+SGTEEEQS FM  +E FF+ER MEFKPPKFYGEGLNCLKLWRAVT+LGGYDKVTS KLWRQVGE+FKPPKTCTTVSWTFRGFYEKALLDYERHK  G E ++PISSQ E MN+DNQASGSGRARRDAAARAM+GWHS R   NGEV +PI KDKN  S QKREKQLKS+GLLKRKKP Y+D  VKA+ TK  K+ ++  VVD+G PADWVKINVQ+TKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVV LPSRIDPHQTSAVVTLHGQLFVRVPFEQS
Sbjct:  144 DDHQLVKPYTEPTADAKTEAQDLPQSNNHGCKDGDPVSTSHPETAEPTVGVKTEASQV--------PEGESSSAVGDTVT----------VSHNEDVTPHAGSSDRKADTGSGEELKH--NEKDITTPKNNGNPNSKCLFLLDDSHMSDGNDSGTEEEQSAFMAVVENFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSSKLWRQVGETFKPPKTCTTVSWTFRGFYEKALLDYERHKF-GTEPSVPISSQPEPMNIDNQASGSGRARRDAAARAMQGWHSQRILGNGEVSDPIIKDKNSASLQKREKQLKSIGLLKRKKPPYVDHVVKAARTKASKSQLDADVVDLGPPADWVKINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVTLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 571          
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A067JQ21_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24296 PE=4 SV=1)

HSP 1 Score: 538.88 bits (1387), Expect = 1.260e-179
Identity = 292/448 (65.18%), Postives = 335/448 (74.78%), Query Frame = -2
Query:  334 VSNDQSSLKPDIETTSNVKSESSFIFHFKTHT---DSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1665
            V + +S LKP+ E T   ++ ++     K+ T   D T++ I   E               K   +AKTE S        ++D     T   E EP TP  + S ++   E   +LKN  NK E  T   NG ++S+ +F LDD H  DG+E+GTEEEQ  FM +LE FF+ER MEFKPPKFYGEGLNCLKLWRAV +LGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKT GGELN+P++S SE MNV+NQ  GSGRARRDAAARAM+GWHS R   NGEV +PI KDKN IS QKREKQLKSLGLLKRKKPS+++ AVK + TK  K  ++  VVD+G PA+WVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPE+PDNPWGVTPF+KVV+LPSRIDPHQTSAVVTLHGQLFVRVPFEQ
Sbjct:  217 VDDKKSLLKPETEPTIEKRTTANEFSDCKSKTCGIDGTANSICHLETA-------------KPAADAKTEPSEVPENKSGHHDG----THPKEDEPTTPHAVSSIIKTELENKRELKNAKNKAEEATLKSNGTSSSKNTFLLDDDH--DGDETGTEEEQCAFMMELENFFRERSMEFKPPKFYGEGLNCLKLWRAVMRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTCGGELNVPLASNSEPMNVENQTPGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSISLQKREKQLKSLGLLKRKKPSFMEHAVKVARTKTSKPQLDVEVVDLGPPAEWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEYPDNPWGVTPFRKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 645          
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: I1LID7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 531.176 bits (1367), Expect = 2.169e-178
Identity = 267/378 (70.63%), Postives = 312/378 (82.54%), Query Frame = -2
Query:  331 ALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPS--YLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1455
             +  SK   + +P+    +EP    P+P  ++ E++   V +++N  ++ ++     NGN+NS+   FLD  H  DGNESGTEEEQS FMK+LE FF+ER MEFKPPKFYGEGLNCLKLWRAVT+LGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHK +GGELN+P++S  E +N++NQAS SGRARRDAAARAM+GWHS R   NGEV +PI KD+N +S QKREKQLKS+ + KRKKPS  Y+D AVKA+ +K  K  ++T V+DIG PADWVK+NVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHP+NPWGVTPFKKVV+LPSRIDPHQTSAVVTLHGQLFVRVPFE +
Sbjct:  152 GMADSKACDNGDPVLASHNEPATPQPAPADTNTEIMN--VLEVENKVDEKQVAEPADNGNSNSKHMLFLDADHSYDGNESGTEEEQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIQGGELNVPVASHPEPINIENQASASGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDRNSVSVQKREKQLKSINIHKRKKPSSPYMDNAVKAARSKPSKPQLDTTVIDIGPPADWVKVNVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEHA 527          
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: V7CL72_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G119200g PE=4 SV=1)

HSP 1 Score: 531.176 bits (1367), Expect = 3.157e-178
Identity = 272/378 (71.96%), Postives = 313/378 (82.80%), Query Frame = -2
Query:  331 ALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPS--YLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1455
             +  SKT  + +P+P   +EP    P+P  ++ E +   V +++N  ++ +      NGN+NS+  FFLD  H  DGNESGTEE+QS FMK+LE FF+ER +EFK PKFYGEGLNCLKLWRAVT+LGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHK +GGELN+PISS  E +N++NQAS SGRARRDAAARAM+GWHS R   NGEV +PI KD+N +S QKREKQLKS+ L KRKKPS  Y+D AVKA+ +K  K  ++T V+DIG PADWVK+NVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHP+NPWGVTPFKKVV+LPSRIDPHQTSAVVTLHGQLFVRVPFEQS
Sbjct:  158 GVVDSKTCDNGDPMPASHNEPAISQPAPTDTNTEFVN--VLEVENKADEKQATDPADNGNSNSKHLFFLDADHSYDGNESGTEEDQSAFMKELENFFRERSLEFKHPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIKGGELNVPISSLPEPINIENQASASGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDRNSVSVQKREKQLKSINLHKRKKPSSPYMDNAVKAARSKPSKPQLDTTVIDIGPPADWVKVNVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 533          
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0A0L619_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G000100 PE=4 SV=1)

HSP 1 Score: 525.398 bits (1352), Expect = 2.271e-176
Identity = 296/462 (64.07%), Postives = 350/462 (75.76%), Query Frame = -2
Query:  334 TCLLRVSNDQSSL-KPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKT---ETSSVSPPKLTENAKTETSSALTQSKTNYDCNP-IPTC-LDEP------EPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1680
            TC+  +   + +L KP I   SN  S  S    +    D +      AE  +DVK+   E  S        ++  ET  +   +K+     P I TC LD+       EP+TP P+ S ++   E   +LK  ++   + TTP NG++N   SF LD+ H ++G+ESGTEEEQS FMK+LE FF+ER +EFKPPKFYGEGLNCLKLWRAVT+LGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKT GGEL++PI+S SE M+++NQ SGSGRARRDAAARAM+GWHS R   NGEV +PI KDKN +S QKREKQLKS+GLLKRKKPSY++ ++K++ TK  K  ++ AVVDIG PADWVK+NVQKTKDC+EVYALVPGLLREEVRVQSDPAGRLVISG+PEHPDNPWGVTPFKKVV+LPSRIDPHQTSAVVTLHGQLFVRVPFEQ
Sbjct:   55 TCVQEIVPLEDNLEKPTILQQSNQISGHSLPMDYDQELDKS-----VAEPASDVKSGPVELPSRDLDAAVSSSPLETVQSSIDAKSEASKMPEIKTCSLDDASTVSHDEPVTPHPVSSCVKAETENAIELKVNED---IVTTPHNGDSNMNHSFLLDENHIAEGSESGTEEEQSAFMKELENFFRERSLEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTNGGELSVPIASNSEPMSIENQGSGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSLSMQKREKQLKSIGLLKRKKPSYMEHSMKSARTKSPKPQLDVAVVDIGQPADWVKVNVQKTKDCYEVYALVPGLLREEVRVQSDPAGRLVISGDPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 508          
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: F6I0B5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01840 PE=4 SV=1)

HSP 1 Score: 527.324 bits (1357), Expect = 4.545e-176
Identity = 268/345 (77.68%), Postives = 297/345 (86.09%), Query Frame = -2
Query:  331 DMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1362
            DM++   +    +N     E+ T   NGN N     FL + +  +GNESGTEEEQ  FMK+LE FF+ER MEFKPPKFYGEGLNCLKLWRAVT+LGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGEL++P+SS +E MNV+NQASGSGRARRDAAARAM+GWHS R   NGEV +PI KDK+ IS QKREKQLK++GLLKRKKPS L+ AVKA+ TK  K  ++TAVVDIG PADWVKINV++TKDCFEVYALVPGLLREEVRVQSDPAGRLVI+GEPEHPDNPWGVTPFKKVV+LPSRIDPHQTSAVVTLHGQLFVRVPFEQS
Sbjct:  236 DMDMPVAEAHSQENEVTAMEVHTPRENGNLNQS---FLLETNLYEGNESGTEEEQVAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELSVPVSSLAEPMNVENQASGSGRARRDAAARAMQGWHSQRLLGNGEVGDPIIKDKSSISLQKREKQLKNIGLLKRKKPSNLEHAVKAARTKAAKPQLDTAVVDIGPPADWVKINVRRTKDCFEVYALVPGLLREEVRVQSDPAGRLVITGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 577          
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: B9SRA7_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0613120 PE=4 SV=1)

HSP 1 Score: 529.635 bits (1363), Expect = 5.639e-176
Identity = 276/396 (69.70%), Postives = 319/396 (80.56%), Query Frame = -2
Query:  331 TSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTP-VNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1512
            TS++   KLT ++K+E S  + QSK+ +         +  EP  P    S ++   E  ++LKNG+  +E+   P  NGN+ S+ SF L++ H  DG+ESG+EEEQ  FMK+LE FF+ER  EFKPPKFYGEGLNCLKLWRAV +LGGYDKVT+CKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKT GGELN+P++S  E + VDNQ  GSGRARRDAAARAM+GWHS R   NGEV + I KDKN +  QKREKQLK+LG++KRKKPSY++ AVKA+  K  K  ++  VVD+GSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVV+LPSRIDPHQTSAVVTLHGQLFVRVPFEQS
Sbjct:  268 TSNMETAKLTADSKSEPSE-VPQSKSGHADT---VTKEHSEPAIPHAETSSIKTEHENKQELKNGN--SEMDVAPKSNGNSASKSSFLLENYH--DGSESGSEEEQLAFMKELENFFRERSTEFKPPKFYGEGLNCLKLWRAVMRLGGYDKVTTCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTNGGELNLPLTSNPEPVIVDNQTPGSGRARRDAAARAMQGWHSQRLLGNGEVSDAIIKDKNSVPMQKREKQLKNLGIVKRKKPSYMEHAVKAARAKTSKPQLDVEVVDLGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 655          
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A067FW85_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009744mg PE=4 SV=1)

HSP 1 Score: 520.39 bits (1339), Expect = 4.364e-174
Identity = 289/480 (60.21%), Postives = 352/480 (73.33%), Query Frame = -2
Query:  331 NIQPHSTPAHHSTCL-LRVSNDQSSLKPDIETTS--NVKSESSFIFHFKTHTDSTSDHILAA--EATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEP------LTPS--PLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEE----QSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRH-FRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1716
            N++ HSTP      + L V  D SS  PDI+ ++  +VK+++  + +    T + +D IL++  E     K E    SP +        + +  + ++ + D         E +P       TP+     SD EL      ++K+  NK+ELPT P+N  +NS   F LD      GN+ G+E      QS FM++LE FF++R MEFKPPKFYGEGLNCLKLWRAVT+LGGY+KVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKT GGEL++P++SQS+ MN+DNQASGSGRARRDAAARAM+GWHS+H   + E+ +PI KDKN +S QK EKQLKS GL+KRKKPSY++ AVKA+ TK  K+ ++ AVVD+G PADWVKINVQ+TKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVV+LP+RIDPH TSAVVTLHGQLFVRVPFEQ+
Sbjct:   53 NLESHSTPLQEPPSISLDVLGDTSSADPDIQPSAYASVKAKTLEVPNTIEDTTAETDTILSSNSELPESSKVEAPDNSPVESKAGHAAASKAEASTAEPHADSIAELPAESEAKPSFKVQAATPNRNAAPSDTELKNVNDTEIKDKVNKSELPTLPMNEKSNSAQLFLLD------GNDEGSESGTEEEQSSFMEELENFFRDRSMEFKPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTSGGELSLPVASQSQPMNIDNQASGSGRARRDAAARAMQGWHSQHVLGSDEISDPIIKDKNHLSLQKCEKQLKSRGLIKRKKPSYMELAVKAARTKTSKSQLDVAVVDLGPPADWVKINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLHGQLFVRVPFEQT 526          
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy Swiss-Prot
Match: ARID3_ARATH (AT-rich interactive domain-containing protein 3 OS=Arabidopsis thaliana GN=ARID3 PE=1 SV=1)

HSP 1 Score: 470.315 bits (1209), Expect = 3.841e-153
Identity = 260/444 (58.56%), Postives = 314/444 (70.72%), Query Frame = -2
Query:  334 DQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPV-NGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRHFR-NGEVCEPITKDKNFISQQKREKQLKSL-GLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1656
            D+  +  D E T ++K +   +   K  TD+T D     +A  +  TE             + + SSAL  +  N +  P+      P P   S   S+++       DL NG +K  + T PV +G   ++ SF LDD   SDGNESGTEE+QS FMK+L+ FF+ER M+FKPPKFYGEGLNCLKLWRAVT+LGGYDKVT  KLWRQVGESF+PPKTCTTVSWTFRGFYEKALL+YERHK   GEL IP+  + E MN+DNQASGSGRARRDAA+RAM+GWHS+    NGEV +P  KDKN +  QKREKQ+ +  GLLKRK+ +        +   V K+ ++  VVD+G PADWVKINVQ+T+DCFEVYALVPGL+REEVRVQSDPAGRLVISGEPE+P NPWG TPFKKVV+LP+RIDPH TSAVVTL+GQLFVRVP EQ
Sbjct:  369 DEGMITVDAEPTEDMKLD---VPDSKLVTDTTVDSTNNKDAHVEANTE-------------RQDNSSALVLNDANNESAPVKRV---PGPYVAS---SNIKSEARGSGDLNNGVHKI-VRTPPVFDGTMRAKRSFLLDDA--SDGNESGTEEDQSAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKLWRQVGESFRPPKTCTTVSWTFRGFYEKALLEYERHKVSEGELQIPLPLELEPMNIDNQASGSGRARRDAASRAMQGWHSQRLNGNGEVSDPAIKDKNLVLHQKREKQIGTTPGLLKRKRAAEHGA---KNAIHVSKSMLDVTVVDVGPPADWVKINVQRTQDCFEVYALVPGLVREEVRVQSDPAGRLVISGEPENPMNPWGATPFKKVVSLPTRIDPHHTSAVVTLNGQLFVRVPLEQ 784          
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy Swiss-Prot
Match: ARID5_ARATH (AT-rich interactive domain-containing protein 5 OS=Arabidopsis thaliana GN=ARID5 PE=1 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 4.550e-120
Identity = 195/315 (61.90%), Postives = 239/315 (75.87%), Query Frame = -2
Query:  334 SFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVD-----NQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1260
            ++ L D    + +E+G  ++Q  F+K++E F KE  +EFK PKFYG+ LNCLKLWRAV KLGGYD VT+ KLWRQVGESF PPKTCTTVSWTFR FYEKALL+YE+H  + GELN+P S+   +  ++     +QASGSGR RRDAAARAM+GWHS R   +GEV EPI K+K   S  K +K LK++G+ K+K  + +D        K   A V    +D+G PADWVKINV++TKDCFE++ALVPGLLREEVRVQSDPAGRLVI+G+PE  DNPWG+TPFKKVVN P+RIDP  TSAVV+LHG+LFVRVPFEQ
Sbjct:  125 TWLLSDAEAREVDEAGAPQDQEAFIKEVEAFNKENFLEFKAPKFYGQPLNCLKLWRAVIKLGGYDVVTTSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHLRQNGELNLPGSASLPSSGIEKEASSHQASGSGRTRRDAAARAMQGWHSQRLLGSGEVTEPIVKEKGLNSTPK-QKNLKNIGVQKQKTTTGMDLVFSHESEKQSTAEV----IDVGPPADWVKINVRETKDCFEIFALVPGLLREEVRVQSDPAGRLVIAGQPEQLDNPWGITPFKKVVNFPARIDPLHTSAVVSLHGRLFVRVPFEQ 434          
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy Swiss-Prot
Match: ARID6_ARATH (AT-rich interactive domain-containing protein 6 OS=Arabidopsis thaliana GN=ARID6 PE=2 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.556e-111
Identity = 187/332 (56.33%), Postives = 240/332 (72.29%), Query Frame = -2
Query:  334 KTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIP-----ISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1311
            + ++ +    G N  +   +L D      +E+GT  EQ  F++++E F+KE  +EFKPPKFYG+ LN LKLWRAV  LGGY+ VT+ KLWRQVGESF PPKTCTTVS+TFR FYEKALL+YE+     GELN+P     +SS  E     +Q SGSGRARRD+AARAM+GWH+ R   +GEV  P  KDK  IS  K  K+LKS+GL K K+ + +D  V     K L A     VVD+G  ADWVKINV+++KD FE++ALVPGLLR+EVR+QSDPAG++VI+G+PE  DNPWG+TPFKK+V+L +RIDP  TSAV+++HG+LF+RVPFEQ
Sbjct:   72 RVQMLSPKTEGENAKKRKTWLLDSEAQGTDEAGTPVEQVAFLREVEAFYKESFLEFKPPKFYGQPLNILKLWRAVVNLGGYEVVTTNKLWRQVGESFNPPKTCTTVSYTFRNFYEKALLEYEKCLRNNGELNLPGSTLILSSSVEKEPSSHQGSGSGRARRDSAARAMQGWHAQRLVGSGEVTAPAVKDKGLISTPKH-KKLKSIGLQKHKQQTSMDHVVTNEADKQLAAE----VVDVGPVADWVKINVKESKDSFEIFALVPGLLRKEVRIQSDPAGKVVITGQPEQLDNPWGITPFKKIVDLSARIDPLHTSAVMSMHGRLFIRVPFEQ 398          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2RE32_GOSRA0.000e+094.92Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2MHA0_GOSRA0.000e+095.34Uncharacterized protein OS=Gossypium raimondii GN=... [more]
M5VTY4_PRUPE1.004e-18065.92Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
A0A067JQ21_JATCU1.260e-17965.18Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
I1LID7_SOYBN2.169e-17870.63Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
V7CL72_PHAVU3.157e-17871.96Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A0A0A0L619_CUCSA2.271e-17664.07Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
F6I0B5_VITVI4.545e-17677.68Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SRA7_RICCO5.639e-17669.70Transcription factor, putative OS=Ricinus communis... [more]
A0A067FW85_CITSI4.364e-17460.21Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ARID3_ARATH3.841e-15358.56AT-rich interactive domain-containing protein 3 OS... [more]
ARID5_ARATH4.550e-12061.90AT-rich interactive domain-containing protein 5 OS... [more]
ARID6_ARATH1.556e-11156.33AT-rich interactive domain-containing protein 6 OS... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01014ARID_2coord: 238..328
e-value: 2.6E-25
score: 100.1
NoneNo IPR availablePANTHERPTHR15348:SF6AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5-RELATEDcoord: 212..532
NoneNo IPR availablePANTHERPTHR15348AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHTcoord: 212..532
IPR001606ARID DNA-binding domainSMARTSM00501bright_3coord: 242..333
e-value: 7.1E-33
score: 125.2
IPR001606ARID DNA-binding domainGENE3D1.10.150.60coord: 237..345
e-value: 3.4E-30
score: 103.7
IPR001606ARID DNA-binding domainPFAMPF01388ARIDcoord: 244..328
e-value: 1.3E-17
score: 64.0
IPR001606ARID DNA-binding domainPROSITEPS51011ARIDcoord: 241..332
score: 24.813
IPR001606ARID DNA-binding domainSUPERFAMILY46774ARID-likecoord: 236..338
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 446..530
e-value: 5.4E-7
score: 28.9
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 443..530
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 451..530
e-value: 1.5E-5
score: 24.9
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031HSP20coord: 449..530
score: 11.269

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0014616 ID=g.arboreum_cottongen_reftransV1_0014616; Name=g.arboreum_cottongen_reftransV1_0014616; organism=Gossypium arboreum; type=contig; length=2068bp
TTTTTATATAGATTACCTCTTGTTATAGATATACCGTGGTTACTTGTCCA
TTACAATCAAACACATAGGAGCGTCATGTCAATTTGACAATGGAATTTTG
TCAATGAGGGGTTAATCCTATTCTCAACAGACGTCTCAAATTCCGTGACT
CAGAGGCACCTAAGATCATAATATCTGTATCTCATATAATGTAAACTATA
AAGAGGGCTTCAACTAAATGACGACATAAGTGAAACTACACTACTTTGAA
AACGAGAATAAACACTACATGGACGGACGCACAAATAAGCCACTGGCTTT
CAATCATCCACACCTTACCCCCACTACTCAGCTTTGCTCAAATGGAACAC
GTACAAACAACTGTCCATGAAGGGTTACAACCGCTGATGTCTGATGTGGA
TCAATCCTCGAGGGCAAGTTGACAACCTTTTTGAATGGTGTGACACCCCA
AGGATTATCTGGATGCTCAGGTTCACCGCTTATTACCAGGCGTCCTGCAG
GATCAGATTGAACACGCACCTCCTCACGAAGAAGGCCTGGAACTAAAGCA
TAGACCTCAAAACAATCTTTAGTTTTCTGCACATTGATCTTAACCCAATC
TGCTGGGGATCCAATATCAACCACTGCTGTCTCCACATGTGCCTTCAATA
CTTTAGTACATGAAGCCTTGACAGCACAGTCCAAATACGACGGTTTCTTG
CGTTTAAGCAGGCCCAGGCTTTTAAGCTGTTTCTCACGCTTTTGTTGAGA
AATAAAATTCTTATCCTTAGTTATTGGTTCACAGACTTCACCATTACGAA
AATGACGTGAGTGCCAACCCCTCATAGCACGTGCTGCTGCATCCCTTCGT
GCTCTACCAGATCCTGAAGCCTGATTATCAACATTCATAGCCTCTGATTG
CGATGAAATAGGTATATTAAGCTCACCCCCACGAGTCTTATGCCTTTCAT
AATCAAGGAGTGCCTTCTCATAGAAACCACGAAATGTCCATGAAACAGTA
GTACAGGTCTTTGGGGGCTTGAAAGATTCTCCAACTTGCCGCCACAATTT
ACATGAAGTTACCTTGTCATAGCCACCCAATTTAGTAACAGCTCTCCACA
ACTTAAGGCAATTCAGCCCTTCCCCATAAAATTTAGGAGGCTTAAATTCC
ATGCCTCTCTCTTTGAAGAAAATTTCCAGTTGCTTCATGAAGACTGATTG
CTCCTCTTCTGTTCCTGACTCATTGCCATCGGAAAAATGAATGTCATCCA
AAAAAAATGAGAGCTCAGAATTGTTGTTCCCATTAACAGGGGTTGTAGGC
AACTCCGTTTTATTATCCCCATTCTTCAAATCTTCCACTTTCTCCTTCAG
TAGTTCCATATCAGAAAATAATGGAGAAGGGGTAAGTGGCTCAGGTTCAT
CAAGGCAAGTTGGTATGGGGTTACAATCATAATTCGTTTTGCTTTGAGTT
AATGCAGAAGAAGTTTCAGTTTTGGCATTTTCTGTGAGTTTAGGAGGTGA
GACAGAAGAGGTTTCGGTTTTGACATCAGTTGTAGCTTCAGCAGCCAGAA
TATGATCGGAGGTAGAATCAGTGTGGGTCTTGAAATGAAAAATAAAAGAC
GATTCAGATTTCACATTGCTTGTGGTTTCTATATCAGGCTTCAGTGACGA
TTGATCATTGGATACACGAAGTAAGCACGTTGAGTGGTGAGCTGGAGTAG
AATGTGGTTGTATGTTGCTATCAGCATTGGCATGCCCTGTGTGATAGGTT
ATGGAGTTAGCCGCCATGGGCACGGGGGAAGGGGAGGGGGAAGGAGAGGA
AGGATGTTGCTGAAGCGGTGGACTAACAGGACGATCTCCATCGTTCAAGT
TAGAAGCACCTAATACTGGAACAACTAGTTCGCGCTCCTTGTTTTCATTT
TCCTTGGTGTCAGTTATCTCGAATTCCATTAATGAAAGGTTGAAAACTCC
TCCTGCTCCGTAGCTTGCTTAGGAAAATGACGATGAAGAAGGAATCTTGA
ATCCAAATCTAATTAAACCCTAATTATCTTGTGTATCCACAGAGAGCAAC
ACAACAAAACAGAATCTG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001606ARID_dom
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding