g.arboreum_cottongen_reftransV1_0014616, g.arboreum_cottongen_reftransV1_0014616 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0D2RE32_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G000800 PE=4 SV=1) HSP 1 Score: 644.81 bits (1662), Expect = 0.000e+0 Identity = 336/354 (94.92%), Postives = 338/354 (95.48%), Query Frame = -2 Query: 868 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQA 1929 MEFEITDTKENENKERELVVPVLGASNLN GD PVSPPLQQHPSSPSP P M ANSIT HTGHANA NIQPHSTPAHHSTCLL VSNDQSSLKPD+ETTSNVKSESS IFHFKTHTDSTSDHI AAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG ELNIPISSQ+EAMNVDNQ Sbjct: 1 MEFEITDTKENENKERELVVPVLGASNLNGGDHPVSPPLQQHPSSPSPVP----MEANSITSHTGHANAGRNIQPHSTPAHHSTCLLPVSNDQSSLKPDVETTSNVKSESSSIFHFKTHTDSTSDHIQAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGAELNIPISSQAEAMNVDNQV 350
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0D2MHA0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G000800 PE=4 SV=1) HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0 Identity = 327/343 (95.34%), Postives = 328/343 (95.63%), Query Frame = -2 Query: 901 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISS 1929 MEFEITDTKENENKERELVVPVLGASNLN GD PVSPPLQQHPSSPSP P M ANSIT HTGHANA NIQPHSTPAHHSTCLL VSNDQSSLKPD+ETTSNVKSESS IFHFKTHTDSTSDHI AAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG ELNIPISS Sbjct: 1 MEFEITDTKENENKERELVVPVLGASNLNGGDHPVSPPLQQHPSSPSPVP----MEANSITSHTGHANAGRNIQPHSTPAHHSTCLLPVSNDQSSLKPDVETTSNVKSESSSIFHFKTHTDSTSDHIQAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGAELNIPISS 339
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: M5VTY4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003469mg PE=4 SV=1) HSP 1 Score: 538.88 bits (1387), Expect = 1.004e-180 Identity = 296/449 (65.92%), Postives = 334/449 (74.39%), Query Frame = -2 Query: 331 NDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSD-----HILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1659 +D +KP E T++ K+E+ + H D H AE T VKTE S V + E+SSA+ + T + E +TP SD + E+LK+ N+ ++ T NGN NS+ F LDD H SDGN+SGTEEEQS FM +E FF+ER MEFKPPKFYGEGLNCLKLWRAVT+LGGYDKVTS KLWRQVGE+FKPPKTCTTVSWTFRGFYEKALLDYERHK G E ++PISSQ E MN+DNQASGSGRARRDAAARAM+GWHS R NGEV +PI KDKN S QKREKQLKS+GLLKRKKP Y+D VKA+ TK K+ ++ VVD+G PADWVKINVQ+TKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVV LPSRIDPHQTSAVVTLHGQLFVRVPFEQS Sbjct: 144 DDHQLVKPYTEPTADAKTEAQDLPQSNNHGCKDGDPVSTSHPETAEPTVGVKTEASQV--------PEGESSSAVGDTVT----------VSHNEDVTPHAGSSDRKADTGSGEELKH--NEKDITTPKNNGNPNSKCLFLLDDSHMSDGNDSGTEEEQSAFMAVVENFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSSKLWRQVGETFKPPKTCTTVSWTFRGFYEKALLDYERHKF-GTEPSVPISSQPEPMNIDNQASGSGRARRDAAARAMQGWHSQRILGNGEVSDPIIKDKNSASLQKREKQLKSIGLLKRKKPPYVDHVVKAARTKASKSQLDADVVDLGPPADWVKINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVTLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 571
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A067JQ21_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24296 PE=4 SV=1) HSP 1 Score: 538.88 bits (1387), Expect = 1.260e-179 Identity = 292/448 (65.18%), Postives = 335/448 (74.78%), Query Frame = -2 Query: 334 VSNDQSSLKPDIETTSNVKSESSFIFHFKTHT---DSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1665 V + +S LKP+ E T ++ ++ K+ T D T++ I E K +AKTE S ++D T E EP TP + S ++ E +LKN NK E T NG ++S+ +F LDD H DG+E+GTEEEQ FM +LE FF+ER MEFKPPKFYGEGLNCLKLWRAV +LGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKT GGELN+P++S SE MNV+NQ GSGRARRDAAARAM+GWHS R NGEV +PI KDKN IS QKREKQLKSLGLLKRKKPS+++ AVK + TK K ++ VVD+G PA+WVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPE+PDNPWGVTPF+KVV+LPSRIDPHQTSAVVTLHGQLFVRVPFEQ Sbjct: 217 VDDKKSLLKPETEPTIEKRTTANEFSDCKSKTCGIDGTANSICHLETA-------------KPAADAKTEPSEVPENKSGHHDG----THPKEDEPTTPHAVSSIIKTELENKRELKNAKNKAEEATLKSNGTSSSKNTFLLDDDH--DGDETGTEEEQCAFMMELENFFRERSMEFKPPKFYGEGLNCLKLWRAVMRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTCGGELNVPLASNSEPMNVENQTPGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSISLQKREKQLKSLGLLKRKKPSFMEHAVKVARTKTSKPQLDVEVVDLGPPAEWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEYPDNPWGVTPFRKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 645
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: I1LID7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 531.176 bits (1367), Expect = 2.169e-178 Identity = 267/378 (70.63%), Postives = 312/378 (82.54%), Query Frame = -2 Query: 331 ALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPS--YLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1455 + SK + +P+ +EP P+P ++ E++ V +++N ++ ++ NGN+NS+ FLD H DGNESGTEEEQS FMK+LE FF+ER MEFKPPKFYGEGLNCLKLWRAVT+LGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHK +GGELN+P++S E +N++NQAS SGRARRDAAARAM+GWHS R NGEV +PI KD+N +S QKREKQLKS+ + KRKKPS Y+D AVKA+ +K K ++T V+DIG PADWVK+NVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHP+NPWGVTPFKKVV+LPSRIDPHQTSAVVTLHGQLFVRVPFE + Sbjct: 152 GMADSKACDNGDPVLASHNEPATPQPAPADTNTEIMN--VLEVENKVDEKQVAEPADNGNSNSKHMLFLDADHSYDGNESGTEEEQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIQGGELNVPVASHPEPINIENQASASGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDRNSVSVQKREKQLKSINIHKRKKPSSPYMDNAVKAARSKPSKPQLDTTVIDIGPPADWVKVNVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEHA 527
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: V7CL72_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G119200g PE=4 SV=1) HSP 1 Score: 531.176 bits (1367), Expect = 3.157e-178 Identity = 272/378 (71.96%), Postives = 313/378 (82.80%), Query Frame = -2 Query: 331 ALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPS--YLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1455 + SKT + +P+P +EP P+P ++ E + V +++N ++ + NGN+NS+ FFLD H DGNESGTEE+QS FMK+LE FF+ER +EFK PKFYGEGLNCLKLWRAVT+LGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHK +GGELN+PISS E +N++NQAS SGRARRDAAARAM+GWHS R NGEV +PI KD+N +S QKREKQLKS+ L KRKKPS Y+D AVKA+ +K K ++T V+DIG PADWVK+NVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHP+NPWGVTPFKKVV+LPSRIDPHQTSAVVTLHGQLFVRVPFEQS Sbjct: 158 GVVDSKTCDNGDPMPASHNEPAISQPAPTDTNTEFVN--VLEVENKADEKQATDPADNGNSNSKHLFFLDADHSYDGNESGTEEDQSAFMKELENFFRERSLEFKHPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIKGGELNVPISSLPEPINIENQASASGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDRNSVSVQKREKQLKSINLHKRKKPSSPYMDNAVKAARSKPSKPQLDTTVIDIGPPADWVKVNVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 533
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0A0L619_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G000100 PE=4 SV=1) HSP 1 Score: 525.398 bits (1352), Expect = 2.271e-176 Identity = 296/462 (64.07%), Postives = 350/462 (75.76%), Query Frame = -2 Query: 334 TCLLRVSNDQSSL-KPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKT---ETSSVSPPKLTENAKTETSSALTQSKTNYDCNP-IPTC-LDEP------EPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1680 TC+ + + +L KP I SN S S + D + AE +DVK+ E S ++ ET + +K+ P I TC LD+ EP+TP P+ S ++ E +LK ++ + TTP NG++N SF LD+ H ++G+ESGTEEEQS FMK+LE FF+ER +EFKPPKFYGEGLNCLKLWRAVT+LGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKT GGEL++PI+S SE M+++NQ SGSGRARRDAAARAM+GWHS R NGEV +PI KDKN +S QKREKQLKS+GLLKRKKPSY++ ++K++ TK K ++ AVVDIG PADWVK+NVQKTKDC+EVYALVPGLLREEVRVQSDPAGRLVISG+PEHPDNPWGVTPFKKVV+LPSRIDPHQTSAVVTLHGQLFVRVPFEQ Sbjct: 55 TCVQEIVPLEDNLEKPTILQQSNQISGHSLPMDYDQELDKS-----VAEPASDVKSGPVELPSRDLDAAVSSSPLETVQSSIDAKSEASKMPEIKTCSLDDASTVSHDEPVTPHPVSSCVKAETENAIELKVNED---IVTTPHNGDSNMNHSFLLDENHIAEGSESGTEEEQSAFMKELENFFRERSLEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTNGGELSVPIASNSEPMSIENQGSGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSLSMQKREKQLKSIGLLKRKKPSYMEHSMKSARTKSPKPQLDVAVVDIGQPADWVKVNVQKTKDCYEVYALVPGLLREEVRVQSDPAGRLVISGDPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 508
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: F6I0B5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01840 PE=4 SV=1) HSP 1 Score: 527.324 bits (1357), Expect = 4.545e-176 Identity = 268/345 (77.68%), Postives = 297/345 (86.09%), Query Frame = -2 Query: 331 DMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1362 DM++ + +N E+ T NGN N FL + + +GNESGTEEEQ FMK+LE FF+ER MEFKPPKFYGEGLNCLKLWRAVT+LGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGEL++P+SS +E MNV+NQASGSGRARRDAAARAM+GWHS R NGEV +PI KDK+ IS QKREKQLK++GLLKRKKPS L+ AVKA+ TK K ++TAVVDIG PADWVKINV++TKDCFEVYALVPGLLREEVRVQSDPAGRLVI+GEPEHPDNPWGVTPFKKVV+LPSRIDPHQTSAVVTLHGQLFVRVPFEQS Sbjct: 236 DMDMPVAEAHSQENEVTAMEVHTPRENGNLNQS---FLLETNLYEGNESGTEEEQVAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELSVPVSSLAEPMNVENQASGSGRARRDAAARAMQGWHSQRLLGNGEVGDPIIKDKSSISLQKREKQLKNIGLLKRKKPSNLEHAVKAARTKAAKPQLDTAVVDIGPPADWVKINVRRTKDCFEVYALVPGLLREEVRVQSDPAGRLVITGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 577
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: B9SRA7_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0613120 PE=4 SV=1) HSP 1 Score: 529.635 bits (1363), Expect = 5.639e-176 Identity = 276/396 (69.70%), Postives = 319/396 (80.56%), Query Frame = -2 Query: 331 TSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTP-VNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1512 TS++ KLT ++K+E S + QSK+ + + EP P S ++ E ++LKNG+ +E+ P NGN+ S+ SF L++ H DG+ESG+EEEQ FMK+LE FF+ER EFKPPKFYGEGLNCLKLWRAV +LGGYDKVT+CKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKT GGELN+P++S E + VDNQ GSGRARRDAAARAM+GWHS R NGEV + I KDKN + QKREKQLK+LG++KRKKPSY++ AVKA+ K K ++ VVD+GSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVV+LPSRIDPHQTSAVVTLHGQLFVRVPFEQS Sbjct: 268 TSNMETAKLTADSKSEPSE-VPQSKSGHADT---VTKEHSEPAIPHAETSSIKTEHENKQELKNGN--SEMDVAPKSNGNSASKSSFLLENYH--DGSESGSEEEQLAFMKELENFFRERSTEFKPPKFYGEGLNCLKLWRAVMRLGGYDKVTTCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTNGGELNLPLTSNPEPVIVDNQTPGSGRARRDAAARAMQGWHSQRLLGNGEVSDAIIKDKNSVPMQKREKQLKNLGIVKRKKPSYMEHAVKAARAKTSKPQLDVEVVDLGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 655
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A067FW85_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009744mg PE=4 SV=1) HSP 1 Score: 520.39 bits (1339), Expect = 4.364e-174 Identity = 289/480 (60.21%), Postives = 352/480 (73.33%), Query Frame = -2 Query: 331 NIQPHSTPAHHSTCL-LRVSNDQSSLKPDIETTS--NVKSESSFIFHFKTHTDSTSDHILAA--EATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEP------LTPS--PLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEE----QSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRH-FRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1716 N++ HSTP + L V D SS PDI+ ++ +VK+++ + + T + +D IL++ E K E SP + + + + ++ + D E +P TP+ SD EL ++K+ NK+ELPT P+N +NS F LD GN+ G+E QS FM++LE FF++R MEFKPPKFYGEGLNCLKLWRAVT+LGGY+KVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKT GGEL++P++SQS+ MN+DNQASGSGRARRDAAARAM+GWHS+H + E+ +PI KDKN +S QK EKQLKS GL+KRKKPSY++ AVKA+ TK K+ ++ AVVD+G PADWVKINVQ+TKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVV+LP+RIDPH TSAVVTLHGQLFVRVPFEQ+ Sbjct: 53 NLESHSTPLQEPPSISLDVLGDTSSADPDIQPSAYASVKAKTLEVPNTIEDTTAETDTILSSNSELPESSKVEAPDNSPVESKAGHAAASKAEASTAEPHADSIAELPAESEAKPSFKVQAATPNRNAAPSDTELKNVNDTEIKDKVNKSELPTLPMNEKSNSAQLFLLD------GNDEGSESGTEEEQSSFMEELENFFRDRSMEFKPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTSGGELSLPVASQSQPMNIDNQASGSGRARRDAAARAMQGWHSQHVLGSDEISDPIIKDKNHLSLQKCEKQLKSRGLIKRKKPSYMELAVKAARTKTSKSQLDVAVVDLGPPADWVKINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLHGQLFVRVPFEQT 526
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy Swiss-Prot
Match: ARID3_ARATH (AT-rich interactive domain-containing protein 3 OS=Arabidopsis thaliana GN=ARID3 PE=1 SV=1) HSP 1 Score: 470.315 bits (1209), Expect = 3.841e-153 Identity = 260/444 (58.56%), Postives = 314/444 (70.72%), Query Frame = -2 Query: 334 DQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPV-NGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRHFR-NGEVCEPITKDKNFISQQKREKQLKSL-GLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1656 D+ + D E T ++K + + K TD+T D +A + TE + + SSAL + N + P+ P P S S+++ DL NG +K + T PV +G ++ SF LDD SDGNESGTEE+QS FMK+L+ FF+ER M+FKPPKFYGEGLNCLKLWRAVT+LGGYDKVT KLWRQVGESF+PPKTCTTVSWTFRGFYEKALL+YERHK GEL IP+ + E MN+DNQASGSGRARRDAA+RAM+GWHS+ NGEV +P KDKN + QKREKQ+ + GLLKRK+ + + V K+ ++ VVD+G PADWVKINVQ+T+DCFEVYALVPGL+REEVRVQSDPAGRLVISGEPE+P NPWG TPFKKVV+LP+RIDPH TSAVVTL+GQLFVRVP EQ Sbjct: 369 DEGMITVDAEPTEDMKLD---VPDSKLVTDTTVDSTNNKDAHVEANTE-------------RQDNSSALVLNDANNESAPVKRV---PGPYVAS---SNIKSEARGSGDLNNGVHKI-VRTPPVFDGTMRAKRSFLLDDA--SDGNESGTEEDQSAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKLWRQVGESFRPPKTCTTVSWTFRGFYEKALLEYERHKVSEGELQIPLPLELEPMNIDNQASGSGRARRDAASRAMQGWHSQRLNGNGEVSDPAIKDKNLVLHQKREKQIGTTPGLLKRKRAAEHGA---KNAIHVSKSMLDVTVVDVGPPADWVKINVQRTQDCFEVYALVPGLVREEVRVQSDPAGRLVISGEPENPMNPWGATPFKKVVSLPTRIDPHHTSAVVTLNGQLFVRVPLEQ 784
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy Swiss-Prot
Match: ARID5_ARATH (AT-rich interactive domain-containing protein 5 OS=Arabidopsis thaliana GN=ARID5 PE=1 SV=1) HSP 1 Score: 372.859 bits (956), Expect = 4.550e-120 Identity = 195/315 (61.90%), Postives = 239/315 (75.87%), Query Frame = -2 Query: 334 SFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVD-----NQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1260 ++ L D + +E+G ++Q F+K++E F KE +EFK PKFYG+ LNCLKLWRAV KLGGYD VT+ KLWRQVGESF PPKTCTTVSWTFR FYEKALL+YE+H + GELN+P S+ + ++ +QASGSGR RRDAAARAM+GWHS R +GEV EPI K+K S K +K LK++G+ K+K + +D K A V +D+G PADWVKINV++TKDCFE++ALVPGLLREEVRVQSDPAGRLVI+G+PE DNPWG+TPFKKVVN P+RIDP TSAVV+LHG+LFVRVPFEQ Sbjct: 125 TWLLSDAEAREVDEAGAPQDQEAFIKEVEAFNKENFLEFKAPKFYGQPLNCLKLWRAVIKLGGYDVVTTSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHLRQNGELNLPGSASLPSSGIEKEASSHQASGSGRTRRDAAARAMQGWHSQRLLGSGEVTEPIVKEKGLNSTPK-QKNLKNIGVQKQKTTTGMDLVFSHESEKQSTAEV----IDVGPPADWVKINVRETKDCFEIFALVPGLLREEVRVQSDPAGRLVIAGQPEQLDNPWGITPFKKVVNFPARIDPLHTSAVVSLHGRLFVRVPFEQ 434
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy Swiss-Prot
Match: ARID6_ARATH (AT-rich interactive domain-containing protein 6 OS=Arabidopsis thaliana GN=ARID6 PE=2 SV=1) HSP 1 Score: 349.362 bits (895), Expect = 1.556e-111 Identity = 187/332 (56.33%), Postives = 240/332 (72.29%), Query Frame = -2 Query: 334 KTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIP-----ISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1311 + ++ + G N + +L D +E+GT EQ F++++E F+KE +EFKPPKFYG+ LN LKLWRAV LGGY+ VT+ KLWRQVGESF PPKTCTTVS+TFR FYEKALL+YE+ GELN+P +SS E +Q SGSGRARRD+AARAM+GWH+ R +GEV P KDK IS K K+LKS+GL K K+ + +D V K L A VVD+G ADWVKINV+++KD FE++ALVPGLLR+EVR+QSDPAG++VI+G+PE DNPWG+TPFKK+V+L +RIDP TSAV+++HG+LF+RVPFEQ Sbjct: 72 RVQMLSPKTEGENAKKRKTWLLDSEAQGTDEAGTPVEQVAFLREVEAFYKESFLEFKPPKFYGQPLNILKLWRAVVNLGGYEVVTTNKLWRQVGESFNPPKTCTTVSYTFRNFYEKALLEYEKCLRNNGELNLPGSTLILSSSVEKEPSSHQGSGSGRARRDSAARAMQGWHAQRLVGSGEVTAPAVKDKGLISTPKH-KKLKSIGLQKHKQQTSMDHVVTNEADKQLAAE----VVDVGPVADWVKINVKESKDSFEIFALVPGLLRKEVRIQSDPAGKVVITGQPEQLDNPWGITPFKKIVDLSARIDPLHTSAVMSMHGRLFIRVPFEQ 398 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0014616 ID=g.arboreum_cottongen_reftransV1_0014616; Name=g.arboreum_cottongen_reftransV1_0014616; organism=Gossypium arboreum; type=contig; length=2068bpback to top |