g.arboreum_cottongen_reftransV1_0014616, g.arboreum_cottongen_reftransV1_0014616 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0D2NU36_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G000800 PE=4 SV=1) HSP 1 Score: 980.319 bits (2533), Expect = 0.000e+0 Identity = 512/533 (96.06%), Postives = 514/533 (96.44%), Query Frame = -2 Query: 331 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1929 MEFEITDTKENENKERELVVPVLGASNLN GD PVSPPLQQHPSSPSP P M ANSIT HTGHANA NIQPHSTPAHHSTCLL VSNDQSSLKPD+ETTSNVKSESS IFHFKTHTDSTSDHI AAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG ELNIPISSQ+EAMNVDNQASGSGRARRDAAARAMRGWHSRHFRN EV EPI KDKN ISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS Sbjct: 1 MEFEITDTKENENKERELVVPVLGASNLNGGDHPVSPPLQQHPSSPSPVP----MEANSITSHTGHANAGRNIQPHSTPAHHSTCLLPVSNDQSSLKPDVETTSNVKSESSSIFHFKTHTDSTSDHIQAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGAELNIPISSQAEAMNVDNQASGSGRARRDAAARAMRGWHSRHFRNCEVSEPIIKDKNSISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 529
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0B0MJU6_GOSAR (AT-rich interactive domain-containing 3-like protein OS=Gossypium arboreum GN=F383_24040 PE=4 SV=1) HSP 1 Score: 978.778 bits (2529), Expect = 0.000e+0 Identity = 515/533 (96.62%), Postives = 516/533 (96.81%), Query Frame = -2 Query: 331 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1929 MEFEITDTKENENKERELVVPVLGASNLNDGDRPVSPPLQQHPSSPSPSPSPVPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLD+IHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGRARRDAAARAMRGWHSRHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKT VRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS Sbjct: 1 MEFEITDTKENENKERELVVPVLGASNLNDGDRPVSPPLQQHPSSPSPSPSPVPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDEIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGRARRDAAARAMRGWHSRHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKT-----------------VRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 516
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0D2QKM9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G000800 PE=4 SV=1) HSP 1 Score: 971.844 bits (2511), Expect = 0.000e+0 Identity = 512/541 (94.64%), Postives = 514/541 (95.01%), Query Frame = -2 Query: 331 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRHFRNGEVCEPITKDKNFISQQKREKQLKSL--------GLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 1929 MEFEITDTKENENKERELVVPVLGASNLN GD PVSPPLQQHPSSPSP P M ANSIT HTGHANA NIQPHSTPAHHSTCLL VSNDQSSLKPD+ETTSNVKSESS IFHFKTHTDSTSDHI AAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG ELNIPISSQ+EAMNVDNQASGSGRARRDAAARAMRGWHSRHFRN EV EPI KDKN ISQQKREKQLKSL GLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS Sbjct: 1 MEFEITDTKENENKERELVVPVLGASNLNGGDHPVSPPLQQHPSSPSPVP----MEANSITSHTGHANAGRNIQPHSTPAHHSTCLLPVSNDQSSLKPDVETTSNVKSESSSIFHFKTHTDSTSDHIQAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGAELNIPISSQAEAMNVDNQASGSGRARRDAAARAMRGWHSRHFRNCEVSEPIIKDKNSISQQKREKQLKSLAGFLHINAGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQS 537
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0D2NU39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G000800 PE=4 SV=1) HSP 1 Score: 914.835 bits (2363), Expect = 0.000e+0 Identity = 482/508 (94.88%), Postives = 486/508 (95.67%), Query Frame = -2 Query: 406 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSR 1929 MEFEITDTKENENKERELVVPVLGASNLN GD PVSPPLQQHPSSPSP P M ANSIT HTGHANA NIQPHSTPAHHSTCLL VSNDQSSLKPD+ETTSNVKSESS IFHFKTHTDSTSDHI AAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG ELNIPISSQ+EAMNVDNQASGSGRARRDAAARAMRGWHSRHFRN EV EPI KDKN ISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKV++ R Sbjct: 1 MEFEITDTKENENKERELVVPVLGASNLNGGDHPVSPPLQQHPSSPSPVP----MEANSITSHTGHANAGRNIQPHSTPAHHSTCLLPVSNDQSSLKPDVETTSNVKSESSSIFHFKTHTDSTSDHIQAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGAELNIPISSQAEAMNVDNQASGSGRARRDAAARAMRGWHSRHFRNCEVSEPIIKDKNSISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVLSTCPR 504
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0D2QKM1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G000800 PE=4 SV=1) HSP 1 Score: 850.892 bits (2197), Expect = 0.000e+0 Identity = 451/475 (94.95%), Postives = 454/475 (95.58%), Query Frame = -2 Query: 505 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQS 1929 MEFEITDTKENENKERELVVPVLGASNLN GD PVSPPLQQHPSSPSP P M ANSIT HTGHANA NIQPHSTPAHHSTCLL VSNDQSSLKPD+ETTSNVKSESS IFHFKTHTDSTSDHI AAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG ELNIPISSQ+EAMNVDNQASGSGRARRDAAARAMRGWHSRHFRN EV EPI KDKN ISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEV Q+ Sbjct: 1 MEFEITDTKENENKERELVVPVLGASNLNGGDHPVSPPLQQHPSSPSPVP----MEANSITSHTGHANAGRNIQPHSTPAHHSTCLLPVSNDQSSLKPDVETTSNVKSESSSIFHFKTHTDSTSDHIQAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGAELNIPISSQAEAMNVDNQASGSGRARRDAAARAMRGWHSRHFRNCEVSEPIIKDKNSISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVSEQT 471
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0D2QDF0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G000800 PE=4 SV=1) HSP 1 Score: 847.425 bits (2188), Expect = 0.000e+0 Identity = 449/471 (95.33%), Postives = 452/471 (95.97%), Query Frame = -2 Query: 517 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEV 1929 MEFEITDTKENENKERELVVPVLGASNLN GD PVSPPLQQHPSSPSP P M ANSIT HTGHANA NIQPHSTPAHHSTCLL VSNDQSSLKPD+ETTSNVKSESS IFHFKTHTDSTSDHI AAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG ELNIPISSQ+EAMNVDNQASGSGRARRDAAARAMRGWHSRHFRN EV EPI KDKN ISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREE+ Sbjct: 1 MEFEITDTKENENKERELVVPVLGASNLNGGDHPVSPPLQQHPSSPSPVP----MEANSITSHTGHANAGRNIQPHSTPAHHSTCLLPVSNDQSSLKPDVETTSNVKSESSSIFHFKTHTDSTSDHIQAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGAELNIPISSQAEAMNVDNQASGSGRARRDAAARAMRGWHSRHFRNCEVSEPIIKDKNSISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEL 467
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0D2RE39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G000800 PE=4 SV=1) HSP 1 Score: 845.884 bits (2184), Expect = 0.000e+0 Identity = 449/470 (95.53%), Postives = 451/470 (95.96%), Query Frame = -2 Query: 520 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREE 1929 MEFEITDTKENENKERELVVPVLGASNLN GD PVSPPLQQHPSSPSP P M ANSIT HTGHANA NIQPHSTPAHHSTCLL VSNDQSSLKPD+ETTSNVKSESS IFHFKTHTDSTSDHI AAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG ELNIPISSQ+EAMNVDNQASGSGRARRDAAARAMRGWHSRHFRN EV EPI KDKN ISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREE Sbjct: 1 MEFEITDTKENENKERELVVPVLGASNLNGGDHPVSPPLQQHPSSPSPVP----MEANSITSHTGHANAGRNIQPHSTPAHHSTCLLPVSNDQSSLKPDVETTSNVKSESSSIFHFKTHTDSTSDHIQAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGAELNIPISSQAEAMNVDNQASGSGRARRDAAARAMRGWHSRHFRNCEVSEPIIKDKNSISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREE 466
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0D2MH95_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G000800 PE=4 SV=1) HSP 1 Score: 808.905 bits (2088), Expect = 0.000e+0 Identity = 432/453 (95.36%), Postives = 434/453 (95.81%), Query Frame = -2 Query: 571 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKT 1929 MEFEITDTKENENKERELVVPVLGASNLN GD PVSPPLQQHPSSPSP P M ANSIT HTGHANA NIQPHSTPAHHSTCLL VSNDQSSLKPD+ETTSNVKSESS IFHFKTHTDSTSDHI AAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG ELNIPISSQ+EAMNVDNQASGSGRARRDAAARAMRGWHSRHFRN EV EPI KDKN ISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKT Sbjct: 1 MEFEITDTKENENKERELVVPVLGASNLNGGDHPVSPPLQQHPSSPSPVP----MEANSITSHTGHANAGRNIQPHSTPAHHSTCLLPVSNDQSSLKPDVETTSNVKSESSSIFHFKTHTDSTSDHIQAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGAELNIPISSQAEAMNVDNQASGSGRARRDAAARAMRGWHSRHFRNCEVSEPIIKDKNSISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKT 449
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A0D2QDF3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G000800 PE=4 SV=1) HSP 1 Score: 709.909 bits (1831), Expect = 0.000e+0 Identity = 389/430 (90.47%), Postives = 398/430 (92.56%), Query Frame = -2 Query: 649 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLD---CAVKASCTKV 1929 MEFEITDTKENENKERELVVPVLGASNLN GD PVSPPLQQHPSSPSP P M ANSIT HTGHANA NIQPHSTPAHHSTCLL VSNDQSSLKPD+ETTSNVKSESS IFHFKTHTDSTSDHI AAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG ELNIPISSQ+EAMNVDNQASGSGRARRDAAARAMRGWHSRHFRN EV EPI KDKN ISQQKREKQLKS L+ R++ LD +++ C K+ Sbjct: 1 MEFEITDTKENENKERELVVPVLGASNLNGGDHPVSPPLQQHPSSPSPVP----MEANSITSHTGHANAGRNIQPHSTPAHHSTCLLPVSNDQSSLKPDVETTSNVKSESSSIFHFKTHTDSTSDHIQAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGAELNIPISSQAEAMNVDNQASGSGRARRDAAARAMRGWHSRHFRNCEVSEPIIKDKNSISQQKREKQLKS--LVWRQQWLILDPQQIGLRSMCRKL 424 HSP 2 Score: 66.6254 bits (161), Expect = 2.819e-8 Identity = 33/51 (64.71%), Postives = 34/51 (66.67%), Query Frame = -3 Query: 486 MWRQQWLILDPQQIGLRSMCRKLKIVLRSML*FQAFFVRRCVFNLILQDAW 638 +WRQQWLILDPQQIGLRSMCRKL CVFNLILQDAW Sbjct: 402 VWRQQWLILDPQQIGLRSMCRKL-----------------CVFNLILQDAW 435
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Match: A0A061DFY7_THECC (ARID/BRIGHT DNA-binding domain-containing protein, putative OS=Theobroma cacao GN=TCM_000019 PE=4 SV=1) HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0 Identity = 394/538 (73.23%), Postives = 431/538 (80.11%), Query Frame = -2 Query: 334 MEFEITDTKENENKERELVVPVLGASNLNDGDRXXXXXXXXXXXXXXXXXXXXPMAANSITYHTGHANADSNIQPHSTPAHHSTCLLRVSNDQSSLKPDIETTSNVKSESSFI---FHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAH--VETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1929 M+ I+DTKENEN E EL VP GAS++N GD P +P LQ+ SSPS P + ANSI T + NAD+NI+PHSTP HS + + NDQ+SLKP E SNVKSESS + + S+S+HI AE TTDVKTETSS SPPK NAKTET SAL SKTN D +P+PT +EPE LTP P SD++L+KEK +DLKNG NK +LPT PVNGN+NSELSF DD+HFSDGNESGTEEEQS FMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVT+LGGYDKVTSCKLWRQVGESFKPPKT + + + HKT GGELNIPI+SQSE MNVDNQA+GSGRARRDAAARAMRGWHS RH NGEV +PI KDKN IS QKREKQLKSLGLLKRKKPSYLD AVKA+ TKV KA VET VVDIG PADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVV+LP+RIDPHQTSAVVTLHGQLFVRVPFEQ Sbjct: 4 MDSMISDTKENEN-EAELAVP--GASDMNQGDHPGTPQLQEQSSSPSSVP----VEANSIPSQTENTNADNNIEPHSTPPQHSLSSVPIHNDQASLKPATEIPSNVKSESSDLKAPMDATIDSPSSSNHIQIAEPTTDVKTETSSGSPPKPAANAKTETCSALPLSKTNCDIDPVPTSPNEPEQLTPCPSSSDIKLVKEKGDDLKNGVNKVDLPTAPVNGNSNSELSFRFDDVHFSDGNESGTEEEQSAFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTQMLL-----------IHKMKMHKTCGGELNIPIASQSEPMNVDNQAAGSGRARRDAAARAMRGWHSQRHLSNGEVSDPIIKDKNSISLQKREKQLKSLGLLKRKKPSYLDHAVKAARTKVSKAQLSVETTVVDIGPPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHQTSAVVTLHGQLFVRVPFEQ 523
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy Swiss-Prot
Match: ARID3_ARATH (AT-rich interactive domain-containing protein 3 OS=Arabidopsis thaliana GN=ARID3 PE=1 SV=1) HSP 1 Score: 470.315 bits (1209), Expect = 3.841e-153 Identity = 260/444 (58.56%), Postives = 314/444 (70.72%), Query Frame = -2 Query: 334 DQSSLKPDIETTSNVKSESSFIFHFKTHTDSTSDHILAAEATTDVKTETSSVSPPKLTENAKTETSSALTQSKTNYDCNPIPTCLDEPEPLTPSPLFSDMELLKEKVEDLKNGDNKTELPTTPV-NGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHSRHFR-NGEVCEPITKDKNFISQQKREKQLKSL-GLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1656 D+ + D E T ++K + + K TD+T D +A + TE + + SSAL + N + P+ P P S S+++ DL NG +K + T PV +G ++ SF LDD SDGNESGTEE+QS FMK+L+ FF+ER M+FKPPKFYGEGLNCLKLWRAVT+LGGYDKVT KLWRQVGESF+PPKTCTTVSWTFRGFYEKALL+YERHK GEL IP+ + E MN+DNQASGSGRARRDAA+RAM+GWHS+ NGEV +P KDKN + QKREKQ+ + GLLKRK+ + + V K+ ++ VVD+G PADWVKINVQ+T+DCFEVYALVPGL+REEVRVQSDPAGRLVISGEPE+P NPWG TPFKKVV+LP+RIDPH TSAVVTL+GQLFVRVP EQ Sbjct: 369 DEGMITVDAEPTEDMKLD---VPDSKLVTDTTVDSTNNKDAHVEANTE-------------RQDNSSALVLNDANNESAPVKRV---PGPYVAS---SNIKSEARGSGDLNNGVHKI-VRTPPVFDGTMRAKRSFLLDDA--SDGNESGTEEDQSAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKLWRQVGESFRPPKTCTTVSWTFRGFYEKALLEYERHKVSEGELQIPLPLELEPMNIDNQASGSGRARRDAASRAMQGWHSQRLNGNGEVSDPAIKDKNLVLHQKREKQIGTTPGLLKRKRAAEHGA---KNAIHVSKSMLDVTVVDVGPPADWVKINVQRTQDCFEVYALVPGLVREEVRVQSDPAGRLVISGEPENPMNPWGATPFKKVVSLPTRIDPHHTSAVVTLNGQLFVRVPLEQ 784
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy Swiss-Prot
Match: ARID5_ARATH (AT-rich interactive domain-containing protein 5 OS=Arabidopsis thaliana GN=ARID5 PE=1 SV=1) HSP 1 Score: 372.859 bits (956), Expect = 4.550e-120 Identity = 195/315 (61.90%), Postives = 239/315 (75.87%), Query Frame = -2 Query: 334 SFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIPISSQSEAMNVD-----NQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1260 ++ L D + +E+G ++Q F+K++E F KE +EFK PKFYG+ LNCLKLWRAV KLGGYD VT+ KLWRQVGESF PPKTCTTVSWTFR FYEKALL+YE+H + GELN+P S+ + ++ +QASGSGR RRDAAARAM+GWHS R +GEV EPI K+K S K +K LK++G+ K+K + +D K A V +D+G PADWVKINV++TKDCFE++ALVPGLLREEVRVQSDPAGRLVI+G+PE DNPWG+TPFKKVVN P+RIDP TSAVV+LHG+LFVRVPFEQ Sbjct: 125 TWLLSDAEAREVDEAGAPQDQEAFIKEVEAFNKENFLEFKAPKFYGQPLNCLKLWRAVIKLGGYDVVTTSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHLRQNGELNLPGSASLPSSGIEKEASSHQASGSGRTRRDAAARAMQGWHSQRLLGSGEVTEPIVKEKGLNSTPK-QKNLKNIGVQKQKTTTGMDLVFSHESEKQSTAEV----IDVGPPADWVKINVRETKDCFEIFALVPGLLREEVRVQSDPAGRLVIAGQPEQLDNPWGITPFKKVVNFPARIDPLHTSAVVSLHGRLFVRVPFEQ 434
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy Swiss-Prot
Match: ARID6_ARATH (AT-rich interactive domain-containing protein 6 OS=Arabidopsis thaliana GN=ARID6 PE=2 SV=1) HSP 1 Score: 349.362 bits (895), Expect = 1.556e-111 Identity = 187/332 (56.33%), Postives = 240/332 (72.29%), Query Frame = -2 Query: 334 KTELPTTPVNGNNNSELSFFLDDIHFSDGNESGTEEEQSVFMKQLEIFFKERGMEFKPPKFYGEGLNCLKLWRAVTKLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRGGELNIP-----ISSQSEAMNVDNQASGSGXXXXXXXXXXXRGWHS-RHFRNGEVCEPITKDKNFISQQKREKQLKSLGLLKRKKPSYLDCAVKASCTKVLKAHVETAVVDIGSPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVNLPSRIDPHQTSAVVTLHGQLFVRVPFEQ 1311 + ++ + G N + +L D +E+GT EQ F++++E F+KE +EFKPPKFYG+ LN LKLWRAV LGGY+ VT+ KLWRQVGESF PPKTCTTVS+TFR FYEKALL+YE+ GELN+P +SS E +Q SGSGRARRD+AARAM+GWH+ R +GEV P KDK IS K K+LKS+GL K K+ + +D V K L A VVD+G ADWVKINV+++KD FE++ALVPGLLR+EVR+QSDPAG++VI+G+PE DNPWG+TPFKK+V+L +RIDP TSAV+++HG+LF+RVPFEQ Sbjct: 72 RVQMLSPKTEGENAKKRKTWLLDSEAQGTDEAGTPVEQVAFLREVEAFYKESFLEFKPPKFYGQPLNILKLWRAVVNLGGYEVVTTNKLWRQVGESFNPPKTCTTVSYTFRNFYEKALLEYEKCLRNNGELNLPGSTLILSSSVEKEPSSHQGSGSGRARRDSAARAMQGWHAQRLVGSGEVTAPAVKDKGLISTPKH-KKLKSIGLQKHKQQTSMDHVVTNEADKQLAAE----VVDVGPVADWVKINVKESKDSFEIFALVPGLLRKEVRIQSDPAGKVVITGQPEQLDNPWGITPFKKIVDLSARIDPLHTSAVMSMHGRLFIRVPFEQ 398 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0014616 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0014616 ID=g.arboreum_cottongen_reftransV1_0014616; Name=g.arboreum_cottongen_reftransV1_0014616; organism=Gossypium arboreum; type=contig; length=2068bpback to top |