g.arboreum_cottongen_reftransV1_0010658, g.arboreum_cottongen_reftransV1_0010658 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A067L8T8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24523 PE=4 SV=1) HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0 Identity = 320/406 (78.82%), Postives = 357/406 (87.93%), Query Frame = -2 Query: 392 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVH 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS TIRNVRLSCCVAGHIKVT+AGEDIQETMDILV GLDP+SE YA IKY L YGGNCQRCNEWCRLP+VTPC HLLCLDCVGLDS+ CT GCG LYEMQ+PE L RPENPNPKWPVPKDLIELQPSYKQD+W+PDWQSTSSSKV+YL++RLKALQ+ N+E S++E+D AK+I++ + PS D LL + R ++S K EKV+IFSQFLEHIHVIEQQLTFAGIKFAG+YSPMHS NKMK+LA FQ+D +CMALLMDGSAALGLDLSFV+HVFLMEPIWDRSMEEQVISRAHRMGATRPI VETLAMRGTIEE+M+EFLQD D CR+ +KEE ++ H+G+RP R+LHDFAE NYLARLSFVH Sbjct: 935 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSATIRNVRLSCCVAGHIKVTDAGEDIQETMDILVAKGLDPVSENYALIKYYLQYGGNCQRCNEWCRLPVVTPCGHLLCLDCVGLDSERCTFSGCGELYEMQSPEILTRPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVSYLVQRLKALQDANRECLSSINEND-AKNIEQ-IHPSVMGDSSA-LLQDCCRQSSKSSKSALEKVIIFSQFLEHIHVIEQQLTFAGIKFAGLYSPMHSSNKMKALASFQHDATCMALLMDGSAALGLDLSFVSHVFLMEPIWDRSMEEQVISRAHRMGATRPIQVETLAMRGTIEERMLEFLQDGDDCRRLVKEEFEKLDHQGTRPHRSLHDFAERNYLARLSFVH 1337
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: F6I5R7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g03330 PE=4 SV=1) HSP 1 Score: 659.448 bits (1700), Expect = 0.000e+0 Identity = 311/395 (78.73%), Postives = 348/395 (88.10%), Query Frame = -2 Query: 425 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAE 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFR +TI+NVRLSCCVAGHIKVT+AGEDIQETMDILVENGLD +S+EYAFIKYNLLYGG C RC EWCRLP++TPCRHLLCLDCV LDS+ CT PGCG+LYEMQ+PE L RPENPNPKWPVPKDLIELQPSYKQD W+PDWQSTSSSKV Y+++RLKALQE N++ +MDED + K ID+ + S++++ L +++RL +E+ + PEKVLIFSQFLEHIHVIEQQLT AGIKF+GMYSPMHS NKMKSL+ FQ+D CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPI VETLAMRGTIEEQM+EFLQDAD CR+FLKEE + EG R R+LHDFAE Sbjct: 885 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRISTIKNVRLSCCVAGHIKVTDAGEDIQETMDILVENGLDTISDEYAFIKYNLLYGGACMRCKEWCRLPVITPCRHLLCLDCVALDSEKCTFPGCGNLYEMQSPEILTRPENPNPKWPVPKDLIELQPSYKQDTWDPDWQSTSSSKVTYIVKRLKALQEANRKSGYAMDEDSDIKDIDELVSLSEQNNCNALLQQDYTRLNDETSHISPEKVLIFSQFLEHIHVIEQQLTVAGIKFSGMYSPMHSSNKMKSLSTFQHDADCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIRVETLAMRGTIEEQMLEFLQDADECRRFLKEEFGKPYSEGVRAHRSLHDFAE 1279
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A0A0KTQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623770 PE=4 SV=1) HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0 Identity = 302/406 (74.38%), Postives = 339/406 (83.50%), Query Frame = -2 Query: 395 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLL-LNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFV 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS TI+N+RLSCCVAGHIKV EAGEDIQETMDILV++GLDP+S+EY+++KYNLLYGG+C RC EWCRLP++ PCRHLLCLDCV LDS+ CT PGCG LY MQTPETLARPENPNPKWPVPKDLIELQPSYKQD+W+PDWQSTSSSKVAYL+ERLK L E N E L PS + G L ++HSR +++ +KVLIFSQFLEHIHVIEQQLT AGI+FAGMYSPMH+ NKMKSLAMFQ+D SCM LLMDGSAALGLDLSFVT+VFLMEPIWDRSMEEQVISRAHRMGA RPIHVETL M TIEEQM++FLQD D C++ +KEE + +EG R R+LHDFA SNYL++L FV Sbjct: 962 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSATIKNIRLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSYLKYNLLYGGSCSRCGEWCRLPVIAPCRHLLCLDCVALDSEGCTFPGCGKLYVMQTPETLARPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVAYLIERLKDLSETNNEA--------------ALLPPSSLTKSGALLQEVDHSRAITSDHEIVRDKVLIFSQFLEHIHVIEQQLTIAGIRFAGMYSPMHASNKMKSLAMFQHDASCMVLLMDGSAALGLDLSFVTYVFLMEPIWDRSMEEQVISRAHRMGAIRPIHVETLVMHETIEEQMVQFLQDPDECKRLMKEEFGKPDYEGPRAHRSLHDFAGSNYLSQLKFV 1353
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: K4D4D8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc11g005250.1 PE=4 SV=1) HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0 Identity = 301/416 (72.36%), Postives = 344/416 (82.69%), Query Frame = -2 Query: 383 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDE---DDEAKH----IDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNS 1609 NELV TVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHI+VTEAG+DIQETMDILVE+GLDP SEEY IKY++L+GGNC RC WCRLP++TPC+HLLCLDCV LDS+ CT+ GCG+LYEMQ+PETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYL+ RLK ++E N+ + S ++ + H I+ F S + + P N+ C + P+KV+IFSQFLEHIHVIEQQL AGI FA +YSPM S +K+K+L FQ+D CMALLMDGSAALGLDLSFVTHV+LMEPIWD+SMEEQVISRAHRMGATRPI VETLAM GTIEEQMM+FLQ+AD R+ LKEE + GH+G+R RTLHDFAESNYL RL+FV +S Sbjct: 930 NELVETVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIRVTEAGDDIQETMDILVEDGLDPTSEEYGLIKYHILFGGNCMRCKAWCRLPVITPCKHLLCLDCVSLDSEKCTISGCGNLYEMQSPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLVGRLKEIKEANRMIIISNEDKIVETSVSHVHTRINNFSMFSSQQYLVGP--------ANDFCNINPQKVIIFSQFLEHIHVIEQQLAIAGISFASLYSPMPSISKVKALLTFQHDVDCMALLMDGSAALGLDLSFVTHVYLMEPIWDKSMEEQVISRAHRMGATRPILVETLAMSGTIEEQMMKFLQEADEGRRLLKEEYGKLGHDGARAPRTLHDFAESNYLTRLNFVRTSS 1337
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: W9RB23_9ROSA (F-box protein OS=Morus notabilis GN=L484_023953 PE=4 SV=1) HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0 Identity = 302/418 (72.25%), Postives = 337/418 (80.62%), Query Frame = -2 Query: 386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQ----------DDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609 NEL VTVRRNILMADWND SHVESLLNPKQWKFRSTTI+N+RLSCCVAGHIKVT+AG+DIQETMD LVENGLDP SEEYAFIKYNLL GGNC RC EWCRLP++TPCRHLLCLDCV LDS+ CT PGCG+LYEMQTP+TLARPENPNPKWPVPKDLIELQPSYKQ D+W+PDWQSTSSSKVAYL+ LK LQ+ N EV+ D+ + K+I LC S N + +K L+FSQFLEHIHVIEQQLT AGIKFAGMYSPMHS NKMKSL FQ D++CM LLMDGSAALGLDLSFV+HVFLMEPIWD+SMEEQVISRAHRMGATRPI+VETLAMR TIEEQM+ FLQDA R+ LK+E ++ EG+R R+LHDFA +NYL++L FV N Sbjct: 959 NELAVTVRRNILMADWNDHSHVESLLNPKQWKFRSTTIKNIRLSCCVAGHIKVTDAGQDIQETMDALVENGLDPTSEEYAFIKYNLLDGGNCVRCGEWCRLPVITPCRHLLCLDCVALDSERCTYPGCGNLYEMQTPDTLARPENPNPKWPVPKDLIELQPSYKQARVAYTLCIPDNWDPDWQSTSSSKVAYLIHSLKELQDANNEVQPPKDDGTDVKNIQGLLCQSWTR--------------NSNINTHKDKFLVFSQFLEHIHVIEQQLTIAGIKFAGMYSPMHSSNKMKSLTTFQNDETCMVLLMDGSAALGLDLSFVSHVFLMEPIWDKSMEEQVISRAHRMGATRPIYVETLAMRSTIEEQMVAFLQDATERRRLLKKEFGKTNSEGARTHRSLHDFAVNNYLSQLRFVRTN 1362
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: B9GWX1_POPTR (SNF2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0003s19730g PE=4 SV=2) HSP 1 Score: 622.468 bits (1604), Expect = 0.000e+0 Identity = 305/409 (74.57%), Postives = 334/409 (81.66%), Query Frame = -2 Query: 383 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNS 1609 NELVVTVRRNIL ADWNDPSHVESLLNPKQWKFRST IRNVRLSCCVAGHIKV E GEDIQETMDIL+E GLDP+SEE+A IKY L YGGNC RC EWCRLP +TPCRHLLCLDCV L+S+ CT PGCG+ YEMQ+PE L RPENPNPKWPVPKDLIELQPSYKQ +WQSTSSSKVAYL+++LKALQE ++E S+D+D + L+L M EKV+IFSQFLEHIHVIEQQL FAGIKFAGMYSPM NKMKSLA FQ+D +CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPI+VETLAMRGTIEEQM+EFLQDAD CR+ LKEES ++ H G+R R+LHDFAES+YLA LSFVH S Sbjct: 943 NELVVTVRRNILTADWNDPSHVESLLNPKQWKFRSTLIRNVRLSCCVAGHIKVAEVGEDIQETMDILIEKGLDPISEEHALIKYYLQYGGNCLRCKEWCRLPFITPCRHLLCLDCVALNSEKCTFPGCGYSYEMQSPEVLTRPENPNPKWPVPKDLIELQPSYKQ----ANWQSTSSSKVAYLVQKLKALQEASRESSWSIDKDTQIS--------------VSSLVLQQDCFSVNRAAM--EKVIIFSQFLEHIHVIEQQLAFAGIKFAGMYSPMPQINKMKSLATFQHDATCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLEFLQDADGCRRVLKEESSKTDHAGARLHRSLHDFAESDYLAHLSFVHTGS 1331
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A022RE03_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a000272mg PE=4 SV=1) HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0 Identity = 296/411 (72.02%), Postives = 339/411 (82.48%), Query Frame = -2 Query: 383 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNH-SRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGS-RPCRTLHDFAESNYLARLSFVHRNS 1609 NELV TVRRNILMADWND SHVESLLNPKQWKFR+ TI+NVRLSCCVAGH++VT+AG+DIQETMDILVENGLDP+S+EY +IKY++ YGG+C RC EWCRLP++TPC+HL+CLDCV LDS+ CT PGCG+ YEMQ+PE LARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKV YL+ RLK LQE N+ + D E S RS + L + +L N ++ EKV++FSQFLEHIH+IEQQL+ AGI+FAGMYSPMHS NKMKSLA FQ+D +CM LLMDGSAALGLDLSFV HV+LMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM GTIEEQM++FLQD + CR+ LKEE + +G+ R TLHDFAESNYLA LSFV +S Sbjct: 908 NELVETVRRNILMADWNDSSHVESLLNPKQWKFRANTIKNVRLSCCVAGHVRVTDAGQDIQETMDILVENGLDPMSQEYGWIKYSISYGGDCMRCKEWCRLPVITPCKHLMCLDCVALDSERCTFPGCGNSYEMQSPEELARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVTYLVRRLKELQETNR-MTGYADVSSELNF------SSNRSYFDISLDQDACHKLKNGWSQIPLEKVIVFSQFLEHIHIIEQQLSIAGIQFAGMYSPMHSSNKMKSLATFQHDANCMVLLMDGSAALGLDLSFVNHVYLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMNGTIEEQMLKFLQDGNECRRLLKEEFATNTPDGTQRSFHTLHDFAESNYLAHLSFVRTSS 1311
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: M0RPT3_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0 Identity = 295/408 (72.30%), Postives = 335/408 (82.11%), Query Frame = -2 Query: 386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609 NELV+TVRRNILMADWNDPSHVESLLNPKQWKFRS+TIRNVRLSCCVAGHIKVT+AG+DIQETMDILV++GLDPLSEEY FIK +LL G +C RC WCRLP++TPCRH+LCLDCV LDS+ CTLPGCG+ YEMQ+PET+ARPENPNPKWP DDW+PDWQSTSSSKVAYL+ERLK LQE N++ S+D D+ K + L S+ + S +ESCK+LPEKV++FSQFLEHIHV+EQQLT AGI FA MYSPMHS NKMKSL FQ D +CM LLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPI+VETLAM GTIEEQM++FLQD +ACR+ K+E + +EG+R RTLH+FAESNYLARLSFV N Sbjct: 838 NELVLTVRRNILMADWNDPSHVESLLNPKQWKFRSSTIRNVRLSCCVAGHIKVTDAGQDIQETMDILVQHGLDPLSEEYGFIKNSLLNGCSCFRCENWCRLPVITPCRHMLCLDCVALDSERCTLPGCGYHYEMQSPETIARPENPNPKWP--------------DDWDPDWQSTSSSKVAYLVERLKVLQETNRKFGESVDGIDKTKEL---LYSSKVNCSFFVQRKAWSAQNSESCKVLPEKVIVFSQFLEHIHVVEQQLTVAGIIFAKMYSPMHSSNKMKSLMTFQLDPNCMVLLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMYGTIEEQMLKFLQDVNACRETFKQEVDKDEYEGTRAHRTLHNFAESNYLARLSFVCTN 1228
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: I1LLD5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0 Identity = 289/409 (70.66%), Postives = 336/409 (82.15%), Query Frame = -2 Query: 386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKF-LKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609 NELV+TVRRNILMADWNDPSH+ESLLNPKQWKFRS T++NVRLSCCVAGHIKVT AGEDIQETMD+LV++GLDP S EY ++YNLLYGG+C RC EWCRLP++TPCRHLLCLDCV +D+ CT PGC LYEMQ+ E ARPENP PKWPVPKDLIELQPSYKQD+W+PDWQSTSSSKV+YL++RLKAL+ N+E + + ++ HI+ L RSD + + + + PEKVLIFSQFLEHIH IEQQLT AGIK+ GMYSPMHS NK KSLAMFQ+D +CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGA+RPI+VETLAMRGTIEEQM++FLQDAD R+ +K+ ++ G R R+LHDFAES+YL +L V+ N Sbjct: 914 NELVITVRRNILMADWNDPSHIESLLNPKQWKFRSATLKNVRLSCCVAGHIKVTHAGEDIQETMDMLVQSGLDPTSGEYTSVRYNLLYGGHCVRCKEWCRLPLITPCRHLLCLDCVSIDNTKCTYPGCSKLYEMQSRE--ARPENPKPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVSYLVQRLKALRGTNEETYFNTENSNDDLHIENSL---HRSDDKSS--IQTCSMSSTKTNLNPEKVLIFSQFLEHIHAIEQQLTIAGIKYTGMYSPMHSSNKKKSLAMFQHDSNCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGASRPIYVETLAMRGTIEEQMLDFLQDADNFRRSPIKDATESVDDSGGRGYRSLHDFAESSYLLKLRSVYTN 1315
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A059ACZ7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01185 PE=4 SV=1) HSP 1 Score: 599.356 bits (1544), Expect = 0.000e+0 Identity = 296/407 (72.73%), Postives = 333/407 (81.82%), Query Frame = -2 Query: 395 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDD-EAKHIDKFLCPSQRSDMGVPLLLN-HSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFV 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWK R TIRNVRLSCCVAGH+KV +AG+DIQETMD+LVE GLDPLSEEYA +KY L++GG+C RC EWCRLPI+TPCRHLLCLDCV L S+ CT PGCG+ Y+M+TPE AR ENPNPKWPVPKDLIELQPSYKQDDW+ DWQSTSSSKVAYL+E+L+ LQ C D+ A +I + PS + V L + S +S ++ EKV+IFSQFLEHIHVIEQQL AGI FAGMYSPMH+ NKMK+LA FQ+D SCMALLMDGSAALGLDLSFVTHVFLMEPIWD+SMEEQVISRAHRMGATRPI+VETL M GTIE+QM+EFLQDAD+C +FLKE++ S EG R RTLHDFA SNYL RL V Sbjct: 765 NELVVTVRRNILMADWNDPSHVESLLNPKQWKLRINTIRNVRLSCCVAGHVKVMDAGQDIQETMDLLVEYGLDPLSEEYALLKYYLIHGGDCLRCKEWCRLPIITPCRHLLCLDCVALSSERCTAPGCGYSYDMETPE--ARRENPNPKWPVPKDLIELQPSYKQDDWDSDWQSTSSSKVAYLLEKLRRLQGATGS--CQFASDNLSAVNIQEQATPSISNSSKVSLTQDDQSGSMTDSHRITTEKVIIFSQFLEHIHVIEQQLMLAGISFAGMYSPMHASNKMKALAKFQHDASCMALLMDGSAALGLDLSFVTHVFLMEPIWDKSMEEQVISRAHRMGATRPIYVETLTMCGTIEQQMLEFLQDADSCGRFLKEQACNSDQEGPRAHRTLHDFAGSNYLLRLKCV 1167
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: FB304_ARATH (F-box protein At3g54460 OS=Arabidopsis thaliana GN=At3g54460 PE=2 SV=1) HSP 1 Score: 581.637 bits (1498), Expect = 0.000e+0 Identity = 285/408 (69.85%), Postives = 326/408 (79.90%), Query Frame = -2 Query: 386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609 NELV TVRRNIL+ADWNDPSHVESLLN KQWKFRS TI NVRLSCCVAGHIK+T+AG DI+ETMD L+EN LD +EEY+FI+ +L+ G NC+RC EWCRLP++TPCRHLLCLDCV LDS+ CT+ GCG+LYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKV+YL++RL+ L E NK+ S ++ D D P S+ + L+ G++ + +KVLIFSQFLEHIHVIEQQLT AGIKF MYSPM S NKMK+LAMFQ D CMALLMDGS ALGLDLSFVTHVFLMEPIWD+S+EEQVISRAHRMGA RPI VETL MRGTIEEQMM FL+DA+ + L + + E +R RTLHD ESNYL+ LSFV + Sbjct: 957 NELVETVRRNILLADWNDPSHVESLLNSKQWKFRSITISNVRLSCCVAGHIKMTDAGHDIKETMDALLENDLDLWTEEYSFIQDSLIGGCNCKRCGEWCRLPVITPCRHLLCLDCVALDSERCTISGCGYLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVSYLVDRLRKLHEGNKKSILSFNKTDNDNLEDN---PPGTSEAFLGKELHGQDCGSQ--MVFVDKVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADCMALLMDGSGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQMMRFLEDAEKSDRLLSGDYIEAKQETTRSRRTLHDLVESNYLSHLSFVRSD 1359
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_SCHPO (DNA repair protein rad8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rad8 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.547e-15 Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = -2 Query: 527 PEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAA-LGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEF 886 PEKV+IFSQF + +I L + +A M + +L F+ D L++ A +GL+L+ HVF+M+P W S+E Q I R HR+G +P+ V +R T+EE+M++ Sbjct: 981 PEKVVIFSQFTTFLDIIADVLESEKMGYARFDGTMSQQMRSTALETFRNDPDVNVLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTVEERMLKI 1101
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: YF2C_SCHPO (Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A2.12 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.882e-15 Identity = 41/133 (30.83%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 488 EKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSA-ALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKE 883 EK+L++SQF +++ ++ L I+ M + + KSL F D + +L+ A ++GL+L+ HV L EP ++ S+E+Q I R HR+G +P+ V + TIEE+++ + R+ +KE Sbjct: 742 EKILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNNDKDVLVMLVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITKDTIEERIVSVQRKK---RQLVKE 871
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_CRYNB (DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=RAD5 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.003e-15 Identity = 39/127 (30.71%), Postives = 72/127 (56.69%), Query Frame = -2 Query: 509 KVLIFSQFLEHIHVIEQQLTFAGIK---FAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADA 880 K L+FSQF + +IE LT GI+ F G S N ++ + ++ + L+ + +GL+L+ +VFLM+ W+ ++E+Q I R HR+G +P++V ++GT+E+++M+ + A Sbjct: 1037 KALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFGR-KTNEPLILLISLKAGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMKIQRSKTA 1162
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_CRYNJ (DNA repair protein RAD5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=RAD5 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.637e-15 Identity = 39/127 (30.71%), Postives = 72/127 (56.69%), Query Frame = -2 Query: 509 KVLIFSQFLEHIHVIEQQLTFAGIK---FAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADA 880 K L+FSQF + +IE LT GI+ F G S N ++ + ++ + L+ + +GL+L+ +VFLM+ W+ ++E+Q I R HR+G +P++V ++GT+E+++M+ + A Sbjct: 1037 KALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFGR-KTNEPLILLISLKAGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMKIQRSKTA 1162
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: YG42_SCHPO (Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC23E6.02 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.607e-14 Identity = 39/123 (31.71%), Postives = 71/123 (57.72%), Query Frame = -2 Query: 518 EKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAA-LGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQD 883 +K+LIFSQF+ + + GIK+ + + + ++L F+ D + LL+ A +GL+L+ HV +++P W+ +EEQ + RAHR+G +P+++ + TIEE+++ LQD Sbjct: 884 DKILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEVDPNVRVLLISLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEERVLA-LQD 1005
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_DEBHA (DNA repair protein RAD5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RAD5 PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.707e-14 Identity = 62/265 (23.40%), Postives = 117/265 (44.15%), Query Frame = -2 Query: 527 VTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLT------FAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAA-LGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEF 1300 +TPC H CL+CV H ++ Q + +P PN + P+ K K+ L R +++E+ + M++ + +L ++ + L+NH ++ E E+V++FSQF ++ +IE +L F KF G + +++ + ++++ M LL+ A +GL+L+ + F+M+P W S+E+Q I R HR+G + V M +IE +M++ Sbjct: 931 LTPCGHAYCLNCV-----------LEH-FDFQEKNS-QKPLCPNCREPISK-----------------------YKIFKLRHRDTSVKEIRFHTKQEMEDPSQNFKFQLYLYDPTKTSSKIQCLINHLKILKEQSP--NEQVVVFSQFSSYLDIIENELKIQISNDFVVYKFDGRLNMNERQKILENFSSQKHENKVMILLLSLKAGGVGLNLTTASRAFMMDPWWSPSVEDQAIDRLHRIGQNSNVKVTRFIMADSIETKMLKI 1157
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_YEAST (DNA repair protein RAD5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD5 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.168e-13 Identity = 42/124 (33.87%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 533 EKVLIFSQFLEHIHVIEQQLT------FAGI-KFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMM 883 E+V+IFSQF ++ ++E++LT A I KF G S + + A+ Y + LL + +GL+L+ +H ++M+P W SME+Q I R HR+G T + V ++ +IEE+M+ Sbjct: 1013 EQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKML 1136
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: YBMA_SCHPO (Uncharacterized ATP-dependent helicase C582.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC582.10c PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.446e-13 Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = -2 Query: 527 KVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMD-GSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEF 880 K +IFSQF + +I+ L AGI F M++ + KSL + + D LL ALGL+L+ + V L + W+ ++EEQ I R HR+G R + V L + TIEE+++E Sbjct: 672 KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSDSGTQVLLCSLKCGALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVEL 790
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_CANAL (DNA repair protein RAD5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RAD5 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.970e-13 Identity = 83/355 (23.38%), Postives = 144/355 (40.56%), Query Frame = -2 Query: 527 TTIRNVRLSCC----VAG------HIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYG-----GNCQRCNEWCRLP----IVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSR-LGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAG-----IKFAGMYSPMHSGNKMKSLAMFQ--YDDSCMALLMDG--SAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEF 1504 T I +R CC + G I E ED+++ + + EN + ++ K LYG C C + +P +VTPC H CL C+ HL + Q K++ P+ +S S Y + R++ E+R +D +L RS + L+ H + L ++S KV++FSQF ++ +I+ +L A KF G ++ ++ K L F +D +A+L+ + +GL+L+ + ++M+P W S+E+Q I R HR+G + V M +IE +M++ Sbjct: 745 THILRLRQVCCHVDLIGGAHEMDDEIIEAEQDEDMRKFLTSIKENQIRFANDTDVKEKMYNLYGKIKEENECSICTQ-VPIPYSEMVVTPCAHTFCLSCI-----------LEHL--------------------------DFQKELKKEKLCPNCRSPISK---YQLFRIRNQPTKGNEIRFHTQKDAPDYSFQLYLYDPNRSSSKIQALVRHLKALHSQSPN---SKVIVFSQFSSYLDIIQSELKLASEEFIVFKFDGR---LNMNDRTKLLESFNQPLEDGKVAILLLSLKAGGVGLNLTTASRAYMMDPWWSPSIEDQAIDRIHRIGQNETVKVVRFIMENSIETKMLKI 1052 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010658 ID=g.arboreum_cottongen_reftransV1_0010658; Name=g.arboreum_cottongen_reftransV1_0010658; organism=Gossypium arboreum; type=contig; length=1610bpback to top |