g.arboreum_cottongen_reftransV1_0010658, g.arboreum_cottongen_reftransV1_0010658 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A067L8T8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24523 PE=4 SV=1) HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0 Identity = 320/406 (78.82%), Postives = 357/406 (87.93%), Query Frame = -2 Query: 392 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVH 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS TIRNVRLSCCVAGHIKVT+AGEDIQETMDILV GLDP+SE YA IKY L YGGNCQRCNEWCRLP+VTPC HLLCLDCVGLDS+ CT GCG LYEMQ+PE L RPENPNPKWPVPKDLIELQPSYKQD+W+PDWQSTSSSKV+YL++RLKALQ+ N+E S++E+D AK+I++ + PS D LL + R ++S K EKV+IFSQFLEHIHVIEQQLTFAGIKFAG+YSPMHS NKMK+LA FQ+D +CMALLMDGSAALGLDLSFV+HVFLMEPIWDRSMEEQVISRAHRMGATRPI VETLAMRGTIEE+M+EFLQD D CR+ +KEE ++ H+G+RP R+LHDFAE NYLARLSFVH Sbjct: 935 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSATIRNVRLSCCVAGHIKVTDAGEDIQETMDILVAKGLDPVSENYALIKYYLQYGGNCQRCNEWCRLPVVTPCGHLLCLDCVGLDSERCTFSGCGELYEMQSPEILTRPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVSYLVQRLKALQDANRECLSSINEND-AKNIEQ-IHPSVMGDSSA-LLQDCCRQSSKSSKSALEKVIIFSQFLEHIHVIEQQLTFAGIKFAGLYSPMHSSNKMKALASFQHDATCMALLMDGSAALGLDLSFVSHVFLMEPIWDRSMEEQVISRAHRMGATRPIQVETLAMRGTIEERMLEFLQDGDDCRRLVKEEFEKLDHQGTRPHRSLHDFAERNYLARLSFVH 1337
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: F6I5R7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g03330 PE=4 SV=1) HSP 1 Score: 659.448 bits (1700), Expect = 0.000e+0 Identity = 311/395 (78.73%), Postives = 348/395 (88.10%), Query Frame = -2 Query: 425 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAE 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFR +TI+NVRLSCCVAGHIKVT+AGEDIQETMDILVENGLD +S+EYAFIKYNLLYGG C RC EWCRLP++TPCRHLLCLDCV LDS+ CT PGCG+LYEMQ+PE L RPENPNPKWPVPKDLIELQPSYKQD W+PDWQSTSSSKV Y+++RLKALQE N++ +MDED + K ID+ + S++++ L +++RL +E+ + PEKVLIFSQFLEHIHVIEQQLT AGIKF+GMYSPMHS NKMKSL+ FQ+D CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPI VETLAMRGTIEEQM+EFLQDAD CR+FLKEE + EG R R+LHDFAE Sbjct: 885 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRISTIKNVRLSCCVAGHIKVTDAGEDIQETMDILVENGLDTISDEYAFIKYNLLYGGACMRCKEWCRLPVITPCRHLLCLDCVALDSEKCTFPGCGNLYEMQSPEILTRPENPNPKWPVPKDLIELQPSYKQDTWDPDWQSTSSSKVTYIVKRLKALQEANRKSGYAMDEDSDIKDIDELVSLSEQNNCNALLQQDYTRLNDETSHISPEKVLIFSQFLEHIHVIEQQLTVAGIKFSGMYSPMHSSNKMKSLSTFQHDADCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIRVETLAMRGTIEEQMLEFLQDADECRRFLKEEFGKPYSEGVRAHRSLHDFAE 1279
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A0A0KTQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623770 PE=4 SV=1) HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0 Identity = 302/406 (74.38%), Postives = 339/406 (83.50%), Query Frame = -2 Query: 395 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLL-LNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFV 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS TI+N+RLSCCVAGHIKV EAGEDIQETMDILV++GLDP+S+EY+++KYNLLYGG+C RC EWCRLP++ PCRHLLCLDCV LDS+ CT PGCG LY MQTPETLARPENPNPKWPVPKDLIELQPSYKQD+W+PDWQSTSSSKVAYL+ERLK L E N E L PS + G L ++HSR +++ +KVLIFSQFLEHIHVIEQQLT AGI+FAGMYSPMH+ NKMKSLAMFQ+D SCM LLMDGSAALGLDLSFVT+VFLMEPIWDRSMEEQVISRAHRMGA RPIHVETL M TIEEQM++FLQD D C++ +KEE + +EG R R+LHDFA SNYL++L FV Sbjct: 962 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSATIKNIRLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSYLKYNLLYGGSCSRCGEWCRLPVIAPCRHLLCLDCVALDSEGCTFPGCGKLYVMQTPETLARPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVAYLIERLKDLSETNNEA--------------ALLPPSSLTKSGALLQEVDHSRAITSDHEIVRDKVLIFSQFLEHIHVIEQQLTIAGIRFAGMYSPMHASNKMKSLAMFQHDASCMVLLMDGSAALGLDLSFVTYVFLMEPIWDRSMEEQVISRAHRMGAIRPIHVETLVMHETIEEQMVQFLQDPDECKRLMKEEFGKPDYEGPRAHRSLHDFAGSNYLSQLKFV 1353
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: K4D4D8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc11g005250.1 PE=4 SV=1) HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0 Identity = 301/416 (72.36%), Postives = 344/416 (82.69%), Query Frame = -2 Query: 383 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDE---DDEAKH----IDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNS 1609 NELV TVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHI+VTEAG+DIQETMDILVE+GLDP SEEY IKY++L+GGNC RC WCRLP++TPC+HLLCLDCV LDS+ CT+ GCG+LYEMQ+PETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYL+ RLK ++E N+ + S ++ + H I+ F S + + P N+ C + P+KV+IFSQFLEHIHVIEQQL AGI FA +YSPM S +K+K+L FQ+D CMALLMDGSAALGLDLSFVTHV+LMEPIWD+SMEEQVISRAHRMGATRPI VETLAM GTIEEQMM+FLQ+AD R+ LKEE + GH+G+R RTLHDFAESNYL RL+FV +S Sbjct: 930 NELVETVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIRVTEAGDDIQETMDILVEDGLDPTSEEYGLIKYHILFGGNCMRCKAWCRLPVITPCKHLLCLDCVSLDSEKCTISGCGNLYEMQSPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLVGRLKEIKEANRMIIISNEDKIVETSVSHVHTRINNFSMFSSQQYLVGP--------ANDFCNINPQKVIIFSQFLEHIHVIEQQLAIAGISFASLYSPMPSISKVKALLTFQHDVDCMALLMDGSAALGLDLSFVTHVYLMEPIWDKSMEEQVISRAHRMGATRPILVETLAMSGTIEEQMMKFLQEADEGRRLLKEEYGKLGHDGARAPRTLHDFAESNYLTRLNFVRTSS 1337
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: W9RB23_9ROSA (F-box protein OS=Morus notabilis GN=L484_023953 PE=4 SV=1) HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0 Identity = 302/418 (72.25%), Postives = 337/418 (80.62%), Query Frame = -2 Query: 386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQ----------DDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609 NEL VTVRRNILMADWND SHVESLLNPKQWKFRSTTI+N+RLSCCVAGHIKVT+AG+DIQETMD LVENGLDP SEEYAFIKYNLL GGNC RC EWCRLP++TPCRHLLCLDCV LDS+ CT PGCG+LYEMQTP+TLARPENPNPKWPVPKDLIELQPSYKQ D+W+PDWQSTSSSKVAYL+ LK LQ+ N EV+ D+ + K+I LC S N + +K L+FSQFLEHIHVIEQQLT AGIKFAGMYSPMHS NKMKSL FQ D++CM LLMDGSAALGLDLSFV+HVFLMEPIWD+SMEEQVISRAHRMGATRPI+VETLAMR TIEEQM+ FLQDA R+ LK+E ++ EG+R R+LHDFA +NYL++L FV N Sbjct: 959 NELAVTVRRNILMADWNDHSHVESLLNPKQWKFRSTTIKNIRLSCCVAGHIKVTDAGQDIQETMDALVENGLDPTSEEYAFIKYNLLDGGNCVRCGEWCRLPVITPCRHLLCLDCVALDSERCTYPGCGNLYEMQTPDTLARPENPNPKWPVPKDLIELQPSYKQARVAYTLCIPDNWDPDWQSTSSSKVAYLIHSLKELQDANNEVQPPKDDGTDVKNIQGLLCQSWTR--------------NSNINTHKDKFLVFSQFLEHIHVIEQQLTIAGIKFAGMYSPMHSSNKMKSLTTFQNDETCMVLLMDGSAALGLDLSFVSHVFLMEPIWDKSMEEQVISRAHRMGATRPIYVETLAMRSTIEEQMVAFLQDATERRRLLKKEFGKTNSEGARTHRSLHDFAVNNYLSQLRFVRTN 1362
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: B9GWX1_POPTR (SNF2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0003s19730g PE=4 SV=2) HSP 1 Score: 622.468 bits (1604), Expect = 0.000e+0 Identity = 305/409 (74.57%), Postives = 334/409 (81.66%), Query Frame = -2 Query: 383 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNS 1609 NELVVTVRRNIL ADWNDPSHVESLLNPKQWKFRST IRNVRLSCCVAGHIKV E GEDIQETMDIL+E GLDP+SEE+A IKY L YGGNC RC EWCRLP +TPCRHLLCLDCV L+S+ CT PGCG+ YEMQ+PE L RPENPNPKWPVPKDLIELQPSYKQ +WQSTSSSKVAYL+++LKALQE ++E S+D+D + L+L M EKV+IFSQFLEHIHVIEQQL FAGIKFAGMYSPM NKMKSLA FQ+D +CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPI+VETLAMRGTIEEQM+EFLQDAD CR+ LKEES ++ H G+R R+LHDFAES+YLA LSFVH S Sbjct: 943 NELVVTVRRNILTADWNDPSHVESLLNPKQWKFRSTLIRNVRLSCCVAGHIKVAEVGEDIQETMDILIEKGLDPISEEHALIKYYLQYGGNCLRCKEWCRLPFITPCRHLLCLDCVALNSEKCTFPGCGYSYEMQSPEVLTRPENPNPKWPVPKDLIELQPSYKQ----ANWQSTSSSKVAYLVQKLKALQEASRESSWSIDKDTQIS--------------VSSLVLQQDCFSVNRAAM--EKVIIFSQFLEHIHVIEQQLAFAGIKFAGMYSPMPQINKMKSLATFQHDATCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLEFLQDADGCRRVLKEESSKTDHAGARLHRSLHDFAESDYLAHLSFVHTGS 1331
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A022RE03_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a000272mg PE=4 SV=1) HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0 Identity = 296/411 (72.02%), Postives = 339/411 (82.48%), Query Frame = -2 Query: 383 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNH-SRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGS-RPCRTLHDFAESNYLARLSFVHRNS 1609 NELV TVRRNILMADWND SHVESLLNPKQWKFR+ TI+NVRLSCCVAGH++VT+AG+DIQETMDILVENGLDP+S+EY +IKY++ YGG+C RC EWCRLP++TPC+HL+CLDCV LDS+ CT PGCG+ YEMQ+PE LARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKV YL+ RLK LQE N+ + D E S RS + L + +L N ++ EKV++FSQFLEHIH+IEQQL+ AGI+FAGMYSPMHS NKMKSLA FQ+D +CM LLMDGSAALGLDLSFV HV+LMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM GTIEEQM++FLQD + CR+ LKEE + +G+ R TLHDFAESNYLA LSFV +S Sbjct: 908 NELVETVRRNILMADWNDSSHVESLLNPKQWKFRANTIKNVRLSCCVAGHVRVTDAGQDIQETMDILVENGLDPMSQEYGWIKYSISYGGDCMRCKEWCRLPVITPCKHLMCLDCVALDSERCTFPGCGNSYEMQSPEELARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVTYLVRRLKELQETNR-MTGYADVSSELNF------SSNRSYFDISLDQDACHKLKNGWSQIPLEKVIVFSQFLEHIHIIEQQLSIAGIQFAGMYSPMHSSNKMKSLATFQHDANCMVLLMDGSAALGLDLSFVNHVYLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMNGTIEEQMLKFLQDGNECRRLLKEEFATNTPDGTQRSFHTLHDFAESNYLAHLSFVRTSS 1311
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: M0RPT3_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0 Identity = 295/408 (72.30%), Postives = 335/408 (82.11%), Query Frame = -2 Query: 386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609 NELV+TVRRNILMADWNDPSHVESLLNPKQWKFRS+TIRNVRLSCCVAGHIKVT+AG+DIQETMDILV++GLDPLSEEY FIK +LL G +C RC WCRLP++TPCRH+LCLDCV LDS+ CTLPGCG+ YEMQ+PET+ARPENPNPKWP DDW+PDWQSTSSSKVAYL+ERLK LQE N++ S+D D+ K + L S+ + S +ESCK+LPEKV++FSQFLEHIHV+EQQLT AGI FA MYSPMHS NKMKSL FQ D +CM LLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPI+VETLAM GTIEEQM++FLQD +ACR+ K+E + +EG+R RTLH+FAESNYLARLSFV N Sbjct: 838 NELVLTVRRNILMADWNDPSHVESLLNPKQWKFRSSTIRNVRLSCCVAGHIKVTDAGQDIQETMDILVQHGLDPLSEEYGFIKNSLLNGCSCFRCENWCRLPVITPCRHMLCLDCVALDSERCTLPGCGYHYEMQSPETIARPENPNPKWP--------------DDWDPDWQSTSSSKVAYLVERLKVLQETNRKFGESVDGIDKTKEL---LYSSKVNCSFFVQRKAWSAQNSESCKVLPEKVIVFSQFLEHIHVVEQQLTVAGIIFAKMYSPMHSSNKMKSLMTFQLDPNCMVLLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMYGTIEEQMLKFLQDVNACRETFKQEVDKDEYEGTRAHRTLHNFAESNYLARLSFVCTN 1228
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: I1LLD5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0 Identity = 289/409 (70.66%), Postives = 336/409 (82.15%), Query Frame = -2 Query: 386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKF-LKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609 NELV+TVRRNILMADWNDPSH+ESLLNPKQWKFRS T++NVRLSCCVAGHIKVT AGEDIQETMD+LV++GLDP S EY ++YNLLYGG+C RC EWCRLP++TPCRHLLCLDCV +D+ CT PGC LYEMQ+ E ARPENP PKWPVPKDLIELQPSYKQD+W+PDWQSTSSSKV+YL++RLKAL+ N+E + + ++ HI+ L RSD + + + + PEKVLIFSQFLEHIH IEQQLT AGIK+ GMYSPMHS NK KSLAMFQ+D +CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGA+RPI+VETLAMRGTIEEQM++FLQDAD R+ +K+ ++ G R R+LHDFAES+YL +L V+ N Sbjct: 914 NELVITVRRNILMADWNDPSHIESLLNPKQWKFRSATLKNVRLSCCVAGHIKVTHAGEDIQETMDMLVQSGLDPTSGEYTSVRYNLLYGGHCVRCKEWCRLPLITPCRHLLCLDCVSIDNTKCTYPGCSKLYEMQSRE--ARPENPKPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVSYLVQRLKALRGTNEETYFNTENSNDDLHIENSL---HRSDDKSS--IQTCSMSSTKTNLNPEKVLIFSQFLEHIHAIEQQLTIAGIKYTGMYSPMHSSNKKKSLAMFQHDSNCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGASRPIYVETLAMRGTIEEQMLDFLQDADNFRRSPIKDATESVDDSGGRGYRSLHDFAESSYLLKLRSVYTN 1315
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A059ACZ7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01185 PE=4 SV=1) HSP 1 Score: 599.356 bits (1544), Expect = 0.000e+0 Identity = 296/407 (72.73%), Postives = 333/407 (81.82%), Query Frame = -2 Query: 395 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDD-EAKHIDKFLCPSQRSDMGVPLLLN-HSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFV 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWK R TIRNVRLSCCVAGH+KV +AG+DIQETMD+LVE GLDPLSEEYA +KY L++GG+C RC EWCRLPI+TPCRHLLCLDCV L S+ CT PGCG+ Y+M+TPE AR ENPNPKWPVPKDLIELQPSYKQDDW+ DWQSTSSSKVAYL+E+L+ LQ C D+ A +I + PS + V L + S +S ++ EKV+IFSQFLEHIHVIEQQL AGI FAGMYSPMH+ NKMK+LA FQ+D SCMALLMDGSAALGLDLSFVTHVFLMEPIWD+SMEEQVISRAHRMGATRPI+VETL M GTIE+QM+EFLQDAD+C +FLKE++ S EG R RTLHDFA SNYL RL V Sbjct: 765 NELVVTVRRNILMADWNDPSHVESLLNPKQWKLRINTIRNVRLSCCVAGHVKVMDAGQDIQETMDLLVEYGLDPLSEEYALLKYYLIHGGDCLRCKEWCRLPIITPCRHLLCLDCVALSSERCTAPGCGYSYDMETPE--ARRENPNPKWPVPKDLIELQPSYKQDDWDSDWQSTSSSKVAYLLEKLRRLQGATGS--CQFASDNLSAVNIQEQATPSISNSSKVSLTQDDQSGSMTDSHRITTEKVIIFSQFLEHIHVIEQQLMLAGISFAGMYSPMHASNKMKALAKFQHDASCMALLMDGSAALGLDLSFVTHVFLMEPIWDKSMEEQVISRAHRMGATRPIYVETLTMCGTIEQQMLEFLQDADSCGRFLKEQACNSDQEGPRAHRTLHDFAGSNYLLRLKCV 1167
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: SM3L2_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arabidopsis thaliana GN=At5g22750 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.171e-12 Identity = 61/275 (22.18%), Postives = 108/275 (39.27%), Query Frame = -2 Query: 536 GNCQRCNEWCRLPIVTPCRHLLCLDCV-----GLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMD-GSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQM 1342 G C C E ++TPC H LC +C+ S +C P C + Q E + P + V K+ +E SSK+ L+E L+ L+ K ++FSQ+ + +++ L+ F + + + K L F D S + LLM + +G++L+ ++ F+M+P W+ ++EEQ + R HR+G T+ + + ++GT+EE+M Sbjct: 792 GECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLC--PVCRNTVSKQ--ELITAPTESRFQVDVEKNWVE------------------SSKITALLEELEGLRSSGS------------------------------------------------KSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERM 996
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_YARLI (DNA repair protein RAD5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RAD5 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.179e-12 Identity = 39/130 (30.00%), Postives = 67/130 (51.54%), Query Frame = -2 Query: 521 KMLPE--KVLIFSQFLEHIHVIEQQL---TFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQ 895 K LP+ K ++FSQF ++ +I+ +L +F G S + +K+ F + L+ + +GL+L H F+M+P W + E Q I R HRMG T+ +HV + ++EE+M++ Q Sbjct: 869 KQLPKDAKSVVFSQFTSYLDIIQTELRREKIQAFRFDGTLSRQQRTDVLKA---FGLSKGSVLLISLKTGGVGLNLVTANHAFIMDPWWTFAQEAQAIDRIHRMGQTKDVHVTRFIVENSVEEKMLKIQQ 995
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_CANGA (DNA repair protein RAD5 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RAD5 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.332e-12 Identity = 41/129 (31.78%), Postives = 68/129 (52.71%), Query Frame = -2 Query: 518 EKVLIFSQFLEHIHVIEQQLT-------FAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQD 883 E+V++FSQF ++ ++E QL KF G S ++ + Y + LL + +GL+L+ ++ F+M+P W SME+Q I R HR+G T + V + G+IEE+M+ +QD Sbjct: 994 EQVVVFSQFSSYLDILESQLNEVYSSNKLKVYKFDGRLSLKERTAVLEDFKVKDYAVQKVLLLSLKAGGVGLNLTCASYAFMMDPWWSPSMEDQAIDRIHRIGQTNSVKVIRFVIDGSIEEKMLR-IQD 1121
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RAD5_GIBZE (DNA repair protein RAD5 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RAD5 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.061e-12 Identity = 38/118 (32.20%), Postives = 62/118 (52.54%), Query Frame = -2 Query: 530 KVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMD-GSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMME 880 K ++FSQF + +IE LT A IKF + M + L F LL+ + +GL+L+ VF+M+P W ++E Q I R HRMG + V+ ++ ++EE+M++ Sbjct: 1004 KSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEFTEKKGFTILLLSLRAGGVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRMGQEAEVQVKRFVVKESVEERMLK 1121
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: SM3L3_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS=Arabidopsis thaliana GN=At5g43530 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.891e-12 Identity = 39/119 (32.77%), Postives = 63/119 (52.94%), Query Frame = -2 Query: 530 EKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAA-LGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMME 883 EK ++FSQ+ + ++E L G +F + + K L F LLM A +GL+L+ + VFLM+P W+ ++EEQ I R HR+G R + V ++ T+EE+M + Sbjct: 1128 EKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQ 1246
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: SHPRH_MOUSE (E3 ubiquitin-protein ligase SHPRH OS=Mus musculus GN=Shprh PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.629e-11 Identity = 57/195 (29.23%), Postives = 92/195 (47.18%), Query Frame = -2 Query: 512 QSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMD-GSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDAD 1093 Q+TS +V+Y+ KA QE + V+ S EA + + L Q D G K L+FS + + + +I + LT ++F + ++L+ F+YD LL+ + + GL + THV L+EPI + + E Q I R HR+G T+P V ++ TIEE+M L+ A+ Sbjct: 1471 QTTSHKEVSYVFTSEKANQEDDIPVKGSHSTKVEA--VVRTLMKIQLRDPGA-------------------KALVFSTWQDVLDIISKALTDNNMEFTQI---SRIKTFQENLSAFKYDPHINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAE 1641
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: HLTF_HUMAN (Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 2.601e-11 Identity = 62/281 (22.06%), Postives = 112/281 (39.86%), Query Frame = -2 Query: 527 CQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKD------LIELQPS--YKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDS---CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEF 1336 C C + +P++T C H+ C C+ C + + E P+ K P+ ++ L+E P + + D + TSSSK+ LM L L++ N + K L+ SQF + +IE L +G F + M +++S+ FQ ++ + LL + +GL+LS + VFLM+P W+ + E+Q R HR+G + + + ++ ++EE M++ Sbjct: 760 CAICLDSLTVPVITHCAHVFCKPCI-----------C----------QVIQNEQPHAKCPLCRNDIHEDNLLECPPEELARDSEKKSDMEWTSSSKINALMHALTDLRKKNPNI----------------------------------------------KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKI 973
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: SHPRH_HUMAN (E3 ubiquitin-protein ligase SHPRH OS=Homo sapiens GN=SHPRH PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.929e-11 Identity = 56/195 (28.72%), Postives = 92/195 (47.18%), Query Frame = -2 Query: 512 QSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMD-GSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDAD 1093 Q+TS +++Y+ KA QE + V+ S EA + + L Q D G K L+FS + + + +I + LT ++FA + ++L+ F+ D LL+ + + GL + THV L+EPI + + E Q I R HR+G T+P V ++ TIEE+M L+ A+ Sbjct: 1480 QTTSHKEISYVFTSEKANQEEDIPVKGSHSTKVEA--VVRTLMKIQLRDPGA-------------------KALVFSTWQDVLDIISKALTDNNMEFAQI---SRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAE 1650
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: HLTF_MOUSE (Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.149e-10 Identity = 34/121 (28.10%), Postives = 64/121 (52.89%), Query Frame = -2 Query: 527 KVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDS---CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEF 880 K L+ SQF + +IE L +G F + M +++S+ FQ ++ + LL + +GL+L + VFLM+P W+ + E+Q R HR+G + + + ++ ++EE M++ Sbjct: 847 KSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQNTEAGSPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKI 967
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: HLTF_RABIT (Helicase-like transcription factor OS=Oryctolagus cuniculus GN=HLTF PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.652e-10 Identity = 34/121 (28.10%), Postives = 64/121 (52.89%), Query Frame = -2 Query: 527 KVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDS---CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEF 880 K L+ SQF + +IE L +G F + M +++S+ FQ ++ + LL + +GL+L + VFLM+P W+ + E+Q R HR+G + + + ++ ++EE M++ Sbjct: 850 KSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQRFDRCHRLGQKQEVIITKFIVKDSVEENMLKI 970 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010658 ID=g.arboreum_cottongen_reftransV1_0010658; Name=g.arboreum_cottongen_reftransV1_0010658; organism=Gossypium arboreum; type=contig; length=1610bpback to top |