g.arboreum_cottongen_reftransV1_0010658, g.arboreum_cottongen_reftransV1_0010658 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A0B0PRQ1_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_07457 PE=4 SV=1) HSP 1 Score: 863.988 bits (2231), Expect = 0.000e+0 Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = -2 Query: 377 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNSVS 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNSVS Sbjct: 933 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNSVS 1343
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A0D2VUD8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G017400 PE=4 SV=1) HSP 1 Score: 848.581 bits (2191), Expect = 0.000e+0 Identity = 403/411 (98.05%), Postives = 406/411 (98.78%), Query Frame = -2 Query: 377 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNSVS 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAG IKVTEAGEDIQETMDILVE GLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYL+ERLKALQEVNKEVRCSMDEDD+AKHIDKFLCPSQRSDMGVPLLLN SRLGNESC MLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGH+GSRPCRTLHDFAESNYLARLSF HRNSVS Sbjct: 935 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGQIKVTEAGEDIQETMDILVETGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLVERLKALQEVNKEVRCSMDEDDKAKHIDKFLCPSQRSDMGVPLLLNLSRLGNESCNMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHDGSRPCRTLHDFAESNYLARLSFAHRNSVS 1345
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A061FRB8_THECC (SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_045253 PE=4 SV=1) HSP 1 Score: 805.438 bits (2079), Expect = 0.000e+0 Identity = 385/411 (93.67%), Postives = 395/411 (96.11%), Query Frame = -2 Query: 377 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNSVS 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLP+VTPCRHLLCLDCVGLDSK+CTLPGCG LYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQST+SSKVAYL+ERLKALQEVNKE+RCSMDED++AKHIDK L PSQRS+MGVPLL N SR G ES K LP+KVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHS NKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM GTIEEQM+EFLQDADACRKFLKEESQR EGSR RTLHDFAESNYLARLSFVHRNSVS Sbjct: 937 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPVVTPCRHLLCLDCVGLDSKVCTLPGCGRLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTTSSKVAYLVERLKALQEVNKEIRCSMDEDNDAKHIDKLLWPSQRSNMGVPLLQNCSRHGKESYKTLPQKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSSNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMSGTIEEQMLEFLQDADACRKFLKEESQRPDREGSRTRRTLHDFAESNYLARLSFVHRNSVS 1347
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A061FS07_THECC (SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein isoform 3 OS=Theobroma cacao GN=TCM_045253 PE=4 SV=1) HSP 1 Score: 804.668 bits (2077), Expect = 0.000e+0 Identity = 385/411 (93.67%), Postives = 395/411 (96.11%), Query Frame = -2 Query: 377 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNSVS 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLP+VTPCRHLLCLDCVGLDSK+CTLPGCG LYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQST+SSKVAYL+ERLKALQEVNKE+RCSMDED++AKHIDK L PSQRS+MGVPLL N SR G ES K LP+KVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHS NKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM GTIEEQM+EFLQDADACRKFLKEESQR EGSR RTLHDFAESNYLARLSFVHRNSVS Sbjct: 772 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPVVTPCRHLLCLDCVGLDSKVCTLPGCGRLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTTSSKVAYLVERLKALQEVNKEIRCSMDEDNDAKHIDKLLWPSQRSNMGVPLLQNCSRHGKESYKTLPQKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSSNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMSGTIEEQMLEFLQDADACRKFLKEESQRPDREGSRTRRTLHDFAESNYLARLSFVHRNSVS 1182
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A0D2V0N4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G017400 PE=4 SV=1) HSP 1 Score: 793.882 bits (2049), Expect = 0.000e+0 Identity = 383/411 (93.19%), Postives = 386/411 (93.92%), Query Frame = -2 Query: 377 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNSVS 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAG IKVTEAGEDIQETMDILVE GLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYL+ERLKALQEVNKEVRCSMDEDD+AKHIDKFLCPSQRSDMGVPLLLN SRLGNESC MLPEKVLIFSQFLEHIHVIEQQ MKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGH+GSRPCRTLHDFAESNYLARLSF HRNSVS Sbjct: 935 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGQIKVTEAGEDIQETMDILVETGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLVERLKALQEVNKEVRCSMDEDDKAKHIDKFLCPSQRSDMGVPLLLNLSRLGNESCNMLPEKVLIFSQFLEHIHVIEQQ--------------------MKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHDGSRPCRTLHDFAESNYLARLSFAHRNSVS 1325
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: B9RGB4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1452670 PE=4 SV=1) HSP 1 Score: 684.871 bits (1766), Expect = 0.000e+0 Identity = 328/408 (80.39%), Postives = 360/408 (88.24%), Query Frame = -2 Query: 386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS +IRNVRLSCCVAGHIKVT+AGEDIQETMD L E GLDP+SEEYA IKY L YGGNC RC EWCRLP+VTPCRHLLCLDCVGLDS+ CTLPGCG+LYEMQTP++L RPENPNPKWPVPKDLIELQPSYKQDDW+PDWQSTSSSKV+YL++R+K L E N E D++ +AK+I + L PSQ + LL + SR +ES K PEKVLIFSQFLEHIHVIEQQLTFAGIKFAG+YSPMHS NKMKSLA FQ+D +C+ALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRP+ VETLAMRGTIEEQM+EFLQDAD CRK LKEE ++ HEG+RP R+LHDFAE NYLARLSFVH+N Sbjct: 914 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSASIRNVRLSCCVAGHIKVTDAGEDIQETMDDLAEKGLDPISEEYALIKYYLQYGGNCLRCQEWCRLPVVTPCRHLLCLDCVGLDSEKCTLPGCGYLYEMQTPDSLTRPENPNPKWPVPKDLIELQPSYKQDDWDPDWQSTSSSKVSYLVQRMKVLLEANSE-SGHYDKEADAKNIKEHLYPSQIGESNA-LLQDCSRQSSESYKKAPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGLYSPMHSSNKMKSLATFQHDATCLALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPVQVETLAMRGTIEEQMLEFLQDADECRKLLKEEFRKPDHEGARPRRSLHDFAERNYLARLSFVHKN 1319
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A5BGE7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032626 PE=4 SV=1) HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0 Identity = 323/409 (78.97%), Postives = 360/409 (88.02%), Query Frame = -2 Query: 383 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNS 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFR +TI+NVRLSCCVAGHIKVT+AGEDIQETMDILVENGLDP+S+EYAFIKYNLLYGG C RC EWCRLP++TPCRHLLCLDCV LDS+ CT PGCG+LYEMQ+PE L RPENPNPKWPVPKDLIELQPSYKQD W+PDWQSTSSSKV Y+++RLKALQE N++ +MDED + K ID+ + S++++ L +++RL +E+ + PEKVLIFSQFLEHIHVIEQQLT AGIKF+GMYSPMHS NKMKSL+ FQ+D CMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPI VETLAMRGTIEEQM+EFLQDAD CR+FLKEE + EG R R+LHDFAESNYLA LSFV NS Sbjct: 798 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRISTIKNVRLSCCVAGHIKVTDAGEDIQETMDILVENGLDPISDEYAFIKYNLLYGGACMRCKEWCRLPVITPCRHLLCLDCVALDSEKCTFPGCGNLYEMQSPEILTRPENPNPKWPVPKDLIELQPSYKQDTWDPDWQSTSSSKVTYIVKRLKALQEANRKSGYAMDEDSDIKDIDELVSLSEQNNCNALLQQDYTRLNDETSHISPEKVLIFSQFLEHIHVIEQQLTVAGIKFSGMYSPMHSSNKMKSLSTFQHDADCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIRVETLAMRGTIEEQMLEFLQDADECRRFLKEEFGKPYSEGVRAHRSLHDFAESNYLAHLSFVRTNS 1206
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: V4U415_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004162mg PE=4 SV=1) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 322/409 (78.73%), Postives = 356/409 (87.04%), Query Frame = -2 Query: 383 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRNS 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRN+RLSCCVAGHIKVT+AGEDIQETMD+LVENGLDPLS+EYAFIKYNLL GGNC RCNEWCRLP++TPCRH+LCLDCV +DS+ C+LPGCG LYEMQ+PE L RPENPNPKWPVPKDLIELQPSY+QDDWNPDWQSTSSSKVAYL+E+LK LQE N E+ + +ED KHI++ Q S+ L + R ES K LP+KV+IFSQFLEHIHVIEQQLT AGIKFAGMYSPMHS NK+KSL MF++D SC+ALLMDGSA+LGLDLSFVT VFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT+EEQM+EFLQD D CR+ LKEE + EG+R RTLHDFAESNYL+ LSFV NS Sbjct: 931 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRCNEWCRLPVITPCRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPKDLIELQPSYRQDDWNPDWQSTSSSKVAYLVEKLKVLQEANWEICYAFNEDSSVKHIEELPFTPQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLSHLSFVRTNS 1339
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: M5XQS9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015535mg PE=4 SV=1) HSP 1 Score: 674.085 bits (1738), Expect = 0.000e+0 Identity = 318/411 (77.37%), Postives = 357/411 (86.86%), Query Frame = -2 Query: 386 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYK---QDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRPCRTLHDFAESNYLARLSFVHRN 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTI NVRLSCCVAGHIKVT+AGEDIQETMDIL E+GLDP SEEYAFIKYNLLYGGNC RC EWCRLP++TPCRHLLCLDCVGLDS+ CT PGCGHLYEM+TP+ L RPENPNPKWPVPKDLIELQPSYK QD+W+PDWQSTSSSKVAY++++LKALQE N V C +D+++ A D +C S+ S+ ++ + ++ + EKVL+FSQFLEHIHVIEQQLT AGIK+AGMYSPMHS NKMKSLAMFQ+D SC LLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQV+SRAHRMGATRPIHVETLAMRGTIEEQM+EFLQDAD CR+FLKEE +S +G+R R+LHDFAESNYL+++SFV N Sbjct: 918 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIGNVRLSCCVAGHIKVTDAGEDIQETMDILAEDGLDPTSEEYAFIKYNLLYGGNCIRCKEWCRLPVITPCRHLLCLDCVGLDSERCTYPGCGHLYEMETPDALTRPENPNPKWPVPKDLIELQPSYKQARQDNWDPDWQSTSSSKVAYVVQKLKALQEANSNVDCPLDDNNNAMRTDNLVCLSEMSNSKGLRQVHDFKRTTKTHETNLEKVLVFSQFLEHIHVIEQQLTIAGIKYAGMYSPMHSSNKMKSLAMFQHDASCTVLLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVVSRAHRMGATRPIHVETLAMRGTIEEQMLEFLQDADECRRFLKEEVGKSDPKGARTRRSLHDFAESNYLSQISFVRTN 1328
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Match: A0A0D2RW69_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G017400 PE=4 SV=1) HSP 1 Score: 672.544 bits (1734), Expect = 0.000e+0 Identity = 318/324 (98.15%), Postives = 320/324 (98.77%), Query Frame = -2 Query: 638 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDEAKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDR 1609 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAG IKVTEAGEDIQETMDILVE GLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYL+ERLKALQEVNKEVRCSMDEDD+AKHIDKFLCPSQRSDMGVPLLLN SRLGNESC MLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDR Sbjct: 935 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNVRLSCCVAGQIKVTEAGEDIQETMDILVETGLDPLSEEYAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLVERLKALQEVNKEVRCSMDEDDKAKHIDKFLCPSQRSDMGVPLLLNLSRLGNESCNMLPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDR 1258
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: INO80_PHANO (Putative DNA helicase INO80 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=INO80 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.669e-10 Identity = 40/136 (29.41%), Postives = 69/136 (50.74%), Query Frame = -2 Query: 476 KVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAA-LGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQR 880 +VL++ Q I ++E+ LT+ K+ + ++ ++A FQ D + L+ A LG++L+ V + W+ +++ Q + RAHR+G TR + V L GTIEE++ + R KEE QR Sbjct: 1417 RVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQSDPTIFVFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITSGTIEERIRK--------RALQKEEVQR 1544
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: RHP16_SCHPO (ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rhp16 PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 1.915e-10 Identity = 38/125 (30.40%), Postives = 67/125 (53.60%), Query Frame = -2 Query: 509 KVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAA-LGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADA 880 K ++FSQF + +I +L AG + M + ++ F D + L+ A + L+L+ + VF+M+P W+ +++ Q + R HR+G RPI V TL + +IE +++E LQ+ A Sbjct: 710 KSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSNDINITIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIENSIESKIIE-LQEKKA 833
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: INO80_ASPCL (Putative DNA helicase ino80 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ino80 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.510e-10 Identity = 40/136 (29.41%), Postives = 68/136 (50.00%), Query Frame = -2 Query: 476 KVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAA-LGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQR 880 +VL++ Q I ++E+ LT+ K+ + ++ ++A FQ L+ A LG++L+ V + W+ +++ Q + RAHR+G TR + V L RGTIEE++ + R KEE QR Sbjct: 1437 RVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRK--------RALQKEEVQR 1564
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: INO80_ASPFU (Putative DNA helicase ino80 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ino80 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.223e-10 Identity = 40/136 (29.41%), Postives = 68/136 (50.00%), Query Frame = -2 Query: 476 KVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAA-LGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQR 880 +VL++ Q I ++E+ LT+ K+ + ++ ++A FQ L+ A LG++L+ V + W+ +++ Q + RAHR+G TR + V L RGTIEE++ + R KEE QR Sbjct: 1436 RVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRK--------RALQKEEVQR 1563
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Match: INO80_NEOFI (Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.279e-10 Identity = 40/136 (29.41%), Postives = 68/136 (50.00%), Query Frame = -2 Query: 476 KVLIFSQFLEHIHVIEQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAA-LGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQR 880 +VL++ Q I ++E+ LT+ K+ + ++ ++A FQ L+ A LG++L+ V + W+ +++ Q + RAHR+G TR + V L RGTIEE++ + R KEE QR Sbjct: 1436 RVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRK--------RALQKEEVQR 1563 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010658 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010658 ID=g.arboreum_cottongen_reftransV1_0010658; Name=g.arboreum_cottongen_reftransV1_0010658; organism=Gossypium arboreum; type=contig; length=1610bpback to top |