g.arboreum_cottongen_reftransV1_0011991, g.arboreum_cottongen_reftransV1_0011991 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A0A067JL69_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09856 PE=4 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 2.765e-114 Identity = 187/251 (74.50%), Postives = 213/251 (84.86%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRES 755 FCL+LYEHLQ+T+KSLG+ +I+VGIITPYKLQLKCLQ EF ++L++EEGK DIYINTVDAFQGQERDVIIMSCVRAS+HGVGFVADIRRMNVALTRARRALWVMGNAS+L+QSDDWAALI DAKARNCYMDMDSLPK+F GP+G S SN RG R +GPRHR++D HMESRSGTPSED+D SG VISRNG+YRPFK LD LDDF +GDKSR+AWQYGI KKQ+S+G +GKR+S Sbjct: 1100 FCLQLYEHLQKTLKSLGLGRISVGIITPYKLQLKCLQHEFSAILKSEEGK-DIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNASSLIQSDDWAALITDAKARNCYMDMDSLPKEFFVS------KGPQGKGS------SNTRGSRLSGPRHRAMDKHMESRSGTPSEDDDSSGPPVISRNGHYRPFKPLLDNSLDDFDQAGDKSRDAWQYGIQKKQSSSGIVGKRDS 1337
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: B9H754_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16630g PE=4 SV=2) HSP 1 Score: 379.407 bits (973), Expect = 5.575e-113 Identity = 183/252 (72.62%), Postives = 214/252 (84.92%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGK-ASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRES 755 FCL+LYEHLQ+++KSLG+ +ITVGIITPYKLQLKCLQ+EF +VL++EEGK DIYINTVDAFQGQERDVIIMSCVRAS+HGVGFVADIRRMNVALTRA+RALWVMGNA++LVQSDDW+AL+ADAKARNCYM+MDSLPKDF + + GK +SN+RGLR GPRHRS DMHMESRSGTPSED++ SG +VISRNG++ PFK P+D LDDF SGD+SR+AWQYGI KKQ S+ +GKR S Sbjct: 1115 FCLQLYEHLQKSLKSLGMGRITVGIITPYKLQLKCLQQEFSAVLKSEEGK-DIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRAKRALWVMGNATSLVQSDDWSALVADAKARNCYMNMDSLPKDFF-------------VLKGTLGKGSSNVRGLRLGGPRHRSFDMHMESRSGTPSEDDENSGASVISRNGSFGPFKPPMDNSLDDFDQSGDRSRDAWQYGIQKKQGSSAVVGKRGS 1352
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: V7AP63_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G130800g PE=4 SV=1) HSP 1 Score: 379.793 bits (974), Expect = 6.635e-113 Identity = 186/250 (74.40%), Postives = 212/250 (84.80%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRE 752 FCLRLYEH+Q+T+KSLGV KITVGIITPYKLQLKCLQREFE VL +EEGK D+YINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNA+ALVQS+DWAALI DAK+R CYMDMDSLPKDF L+ K GP +Y+ +SNMRG+RSAGPR+RS+DMHMESRSG PSED++ G + SRNGN+R + ++ DDF GDKSR++WQYGI KKQNS+G MGKR+ Sbjct: 1158 FCLRLYEHVQKTVKSLGVGKITVGIITPYKLQLKCLQREFEEVLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSEDWAALINDAKSRKCYMDMDSLPKDF---LVSK---GP--VYTSLPKPSSNMRGMRSAGPRYRSMDMHMESRSGAPSEDDENMGAPIGSRNGNHRQSRFSMENSFDDFDHGGDKSRDSWQYGIQKKQNSSGPMGKRD 1398
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: B9RJG9_RICCO (Splicing endonuclease positive effector sen1, putative OS=Ricinus communis GN=RCOM_1034260 PE=4 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 1.127e-112 Identity = 184/252 (73.02%), Postives = 212/252 (84.13%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGK-ASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRES 755 FC +LYEHLQ+T+KSLG+ +I+VGIITPYKLQLKCLQ EF ++L++EEGK DIYINTVDAFQGQERDVIIMSCVRAS+H VGFVADIRRMNVALTRARRALWVMGNA++LV+SDDWAALI DAKARNCYMDM+SLPK+F + +QGK +SN RG R GPRHRS+D+HME+RSGTPSED+D SG VISRNGNYRPFK +D LDDF SGDKSR+AWQYGI KKQ+S+G +GKRES Sbjct: 1115 FCFQLYEHLQKTLKSLGLGRISVGIITPYKLQLKCLQHEFAAILKSEEGK-DIYINTVDAFQGQERDVIIMSCVRASNHSVGFVADIRRMNVALTRARRALWVMGNANSLVKSDDWAALIDDAKARNCYMDMESLPKEFF-------------VSKGNQGKGSSNTRGSRLGGPRHRSMDLHMEARSGTPSEDDDSSGAPVISRNGNYRPFKPLMDNSLDDFDQSGDKSRDAWQYGIQKKQSSSGFVGKRES 1352
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A0A068TXP0_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_6 OS=Coffea canephora GN=GSCOC_T00034514001 PE=4 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 1.537e-112 Identity = 189/250 (75.60%), Postives = 210/250 (84.00%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRE 752 FCLRLYEHLQ+T KSLGV K+TVGIITPYKLQLKCLQREFE +L +EEGK DIYINTVDAFQGQERDVIIMSCVRAS+HGVGFVADIRRMNVALTRARRALWVMGNA+ALV+SDDWAALI DAKARNCYMDMDSLPKDF +LPK S P Y Q K + RG+R+ G RHR D+HMESRSGTPSED++KS T+ I RNG+YR K P++ LDDF S DKSR+AWQYG+ KK +SAG MGKRE Sbjct: 1130 FCLRLYEHLQKTAKSLGVAKVTVGIITPYKLQLKCLQREFEDILNSEEGK-DIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNANALVKSDDWAALIKDAKARNCYMDMDSLPKDF---VLPK--SSP---YPSYQAKNPSNRGMRT-GLRHRPYDVHMESRSGTPSEDDEKSNTSSILRNGSYRSLKLPVENSLDDFDQSTDKSRDAWQYGVQKKHHSAGAMGKRE 1369
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: K7MEG5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 377.481 bits (968), Expect = 3.747e-112 Identity = 183/251 (72.91%), Postives = 209/251 (83.27%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGK-ASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRE 752 FCLRLYEH+Q+T+KSLG+ KITVGIITPYKLQLKCLQREF+ VL +EEGK D+YINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNA+AL+QS+DWAALI DAK+RNCYMDMDSLPKDF P +Y+ GK +SNMRG+RS GPR+RS+DMHMESR G PSED++ G V SRNGN+R + ++ LDD GDKSR+AWQYGI KK NS+GTMGKR+ Sbjct: 1145 FCLRLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALLQSEDWAALINDAKSRNCYMDMDSLPKDFLVSKAP--------VYTSLPGKPSSNMRGMRSGGPRYRSMDMHMESRLGPPSEDDENMGAPVSSRNGNHRQLRYSMENSLDDVEHGGDKSRDAWQYGIQKKHNSSGTMGKRD 1386
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: K7KZI7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 377.481 bits (968), Expect = 4.572e-112 Identity = 185/251 (73.71%), Postives = 209/251 (83.27%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGK-ASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRE 752 FCLRLYEH+Q+T+KSLGV KITVGIITPYKLQLKCLQREF+ VL +EEGK D+YINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNA+AL+QS+DWAALI DAK+RNCYMDMDSLPKDF P S P GK +SNMRG+RS GPR+RS+DMHMESR G PSE+++ G V SRNGN R + ++ LDDF GDKSR+AWQYGI KKQNS+G+MGKR+ Sbjct: 1146 FCLRLYEHVQKTVKSLGVGKITVGIITPYKLQLKCLQREFDEVLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALLQSEDWAALINDAKSRNCYMDMDSLPKDFLVSKAPSYTSLP--------GKPSSNMRGMRSGGPRYRSMDMHMESRLGPPSEEDENMGAPVSSRNGNLRQSRYSMENSLDDFEHGGDKSRDAWQYGIQKKQNSSGSMGKRD 1387
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A0A0B2S4L8_GLYSO (Putative ATP-dependent helicase C29A10.10c OS=Glycine soja GN=glysoja_020716 PE=4 SV=1) HSP 1 Score: 377.481 bits (968), Expect = 5.581e-112 Identity = 183/251 (72.91%), Postives = 209/251 (83.27%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGK-ASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRE 752 FCLRLYEH+Q+T+KSLG+ KITVGIITPYKLQLKCLQREF+ VL +EEGK D+YINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNA+AL+QS+DWAALI DAK+RNCYMDMDSLPKDF P +Y+ GK +SNMRG+RS GPR+RS+DMHMESR G PSED++ G V SRNGN+R + ++ LDD GDKSR+AWQYGI KK NS+GTMGKR+ Sbjct: 1194 FCLRLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALLQSEDWAALINDAKSRNCYMDMDSLPKDFLVSKAP--------VYTSLPGKPSSNMRGMRSGGPRYRSMDMHMESRLGPPSEDDENMGAPVSSRNGNHRQLRYSMENSLDDVEHGGDKSRDAWQYGIQKKHNSSGTMGKRD 1435
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A0A0B2P1B1_GLYSO (Putative ATP-dependent helicase C29A10.10c OS=Glycine soja GN=glysoja_009604 PE=4 SV=1) HSP 1 Score: 375.941 bits (964), Expect = 1.485e-111 Identity = 184/251 (73.31%), Postives = 209/251 (83.27%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDFTKDLLPKEFSGPRGLYSPSQGK-ASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRE 752 FCLRLYEH+Q+T+KSLG+ KITVGIITPYKLQLKCLQREF+ VL +EEGK D+YINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNA+AL+QS+DWAALI DAK+RNCYMDMDSLPKDF P S P GK +SNMRG+RS GPR+RS+DMHMESR G PSE+++ G V SRNGN R + ++ LDDF GDKSR+AWQYGI KKQNS+G+MGKR+ Sbjct: 1147 FCLRLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALLQSEDWAALINDAKSRNCYMDMDSLPKDFLVSKAPSYTSLP--------GKPSSNMRGMRSGGPRYRSMDMHMESRLGPPSEEDENMGAPVSSRNGNLRQSRYSMENSLDDFEHGGDKSRDAWQYGIQKKQNSSGSMGKRD 1388
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Match: A0A0A0L3B2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G378760 PE=4 SV=1) HSP 1 Score: 372.474 bits (955), Expect = 1.357e-110 Identity = 180/256 (70.31%), Postives = 210/256 (82.03%), Query Frame = 3 Query: 3 FCLRLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLPKDF------TKDLLPKEFSGPRGLYSPSQGKASNMRGLRSAGPRHRSLDMHMESRSGTPSEDEDKSGTTVISRNGNYRPFKSPLDTFLDDFHPSGDKSREAWQYGILKKQNSAGTMGKRE 752 FCLR+YEHLQ+T+KS G+ K++VGIITPYKLQLKCLQREFE VL +EEGK D+YINTVDAFQGQERDVIIMSCVRAS+HGVGFVADIRRMNVALTRARRALWVMGNA+AL+QSDDWAALI DAKARNCYMDM+SLPKDF T+ LP + S SN RGLRSA PRHR+LD+H+ESRSGTPSED++KS + VI+RNGNYRP K+ ++ +D SGDK R+ WQYG+ K+Q S GT+GKR+ Sbjct: 1088 FCLRMYEHLQKTVKSSGIGKVSVGIITPYKLQLKCLQREFEEVLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNANALIQSDDWAALITDAKARNCYMDMESLPKDFLGQKGSTQSTLPGKNS-------------SNTRGLRSALPRHRTLDIHVESRSGTPSEDDEKSNSAVITRNGNYRPSKAAVENSSEDLDQSGDKLRDTWQYGMQKRQGSTGTVGKRD 1329
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy Swiss-Prot
Match: RENT1_CAEEL (Regulator of nonsense transcripts 1 OS=Caenorhabditis elegans GN=smg-2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.124e-14 Identity = 48/127 (37.80%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 21 EHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGK------RDIYINTVDAFQGQERDVIIMSCVRASS-HGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKAR 380 E L + GV +G+IT Y+ Q R F +G ++ I +VDAFQG+E+D II++CVR++ G+GF++D RR+NVA+TRA+ L ++GNA L + D W LI K++ Sbjct: 748 EKLVSKLIKAGVQPHQIGVITSYEGQ-----RSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGLVLVGNAKVLARHDLWHELINHYKSK 869
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy Swiss-Prot
Match: SDE3_ARATH (Probable RNA helicase SDE3 OS=Arabidopsis thaliana GN=SDE3 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.448e-12 Identity = 50/179 (27.93%), Postives = 94/179 (52.51%), Query Frame = 3 Query: 12 RLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRAS--------SHGVGFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDMDSLP--KDFTKDLLPKEFSGPRGLYSPSQGKASNMRGLRSAG 518 ++ E ++R + V + +G+ITPY+ Q+ ++ + + TE + + +V+ FQGQE+ VII+S VR++ ++ +GF+++ RR NVA+TRA L ++GN + + +W L+ N Y LP ++F ++ +E S G P + + +N L + G Sbjct: 690 KVIETIKRLTANDCVQEEDIGVITPYRQQVMKIKEVLDRLDMTE-----VKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGC-GLPEQEEFVEEPFKQEGSS-NGPQYPPEAEWNNSGELNNGG 861
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy Swiss-Prot
Match: MOV10_CHICK (Putative helicase MOV-10 OS=Gallus gallus GN=MOV10 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.799e-12 Identity = 47/142 (33.10%), Postives = 79/142 (55.63%), Query Frame = 3 Query: 15 LYEHLQRTIKSLG---VPKIT---VGIITPYKLQLKCLQREFES---VLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGV--------GFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCY 389 + ++LQ+ ++S G P I+ +GII+PY+ Q++ ++ S VLR + + +V+ FQGQER VI++S VR+ S + GF+ + +R+NVALTRA+ L V+GNA+ L + W + + Y Sbjct: 800 VVQYLQKLLQSQGRRGCPTISPKEIGIISPYRKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQTFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKDPHWHRFLRYCRDEGAY 941
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy Swiss-Prot
Match: MOV10_BOVIN (Putative helicase MOV-10 OS=Bos taurus GN=MOV10 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.009e-12 Identity = 42/120 (35.00%), Postives = 67/120 (55.83%), Query Frame = 3 Query: 66 TVGIITPYKLQLK----CLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHGV--------GFVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCY 389 +VG+I+PY+ Q++ C+ + + LR + +D+ + +V+ FQGQER VI++S VR+S V GF+ + +R NVA+TRA+ L V+GN L DW + K Y Sbjct: 826 SVGVISPYRKQVEKIRYCITK-LDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPDWKVFLEFCKENGGY 944
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy Swiss-Prot
Match: DNA2_XENLA (DNA replication ATP-dependent helicase/nuclease DNA2 OS=Xenopus laevis GN=dna2 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.066e-12 Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 12 RLYEHLQRTIKSLGVPKITVGIITPYKLQLKCLQREFESVLRTEEGKRDIYINTVDAFQGQERDVIIMSCVRASSHG-VG-FVADIRRMNVALTRARRALWVMGNASALVQSDDWAALIADAKARNCYMDM 398 +L HL + G +GII PY+ QLK + F S+ + +NTVD +QG+++ VII+S VR++ G +G + D RR+NVALTRA+ L ++G L + D LI + K N D+ Sbjct: 918 KLVFHLTKLYLKAGCRPSDIGIIAPYRQQLKMISNYFNSL-----SASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTLNRFDCLEQLICNLKTENQIYDL 1043 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0011991 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0011991 ID=g.arboreum_cottongen_reftransV1_0011991; Name=g.arboreum_cottongen_reftransV1_0011991; organism=Gossypium arboreum; type=contig; length=1854bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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