g.arboreum_cottongen_reftransV1_0001270, g.arboreum_cottongen_reftransV1_0001270 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0001270
Unique Nameg.arboreum_cottongen_reftransV1_0001270
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1709
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr7chromosomeg.arboreum_cottongen_reftransV1_0001270:1..1707 .
Chr7:37337523..37341663 -
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: M1ACQ6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402007686 PE=4 SV=1)

HSP 1 Score: 537.339 bits (1383), Expect = 0.000e+0
Identity = 252/317 (79.50%), Postives = 286/317 (90.22%), Query Frame = 2
Query:  284 VGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFK 1234
            +G  E K  E SLKD+GNEFFKAGNYLKAAALYTQAIK+DPSN TLYSNRAAAFLHLVKL+KA+ADAE TI LKP+WEKGYFRKGCILEAMERY+DALAAFQIA +YNPQS+EVS+KIK L+QLAKDKKR +E++N+RSNVD+AK  + LKSE+SEKY +EDSWKE FSF +ET+E AVKSWHETSKVDPRVYFLL+KEK+  +KYAP VNIDKAFESP TH++CFSFLRQYAEDSF++AACLV PKSII+YPQVWKGQGSRKWKHGQ+DG FVQFESPL+R+LWFI SS E GKTLCRDP  LDI AHE+LPR+FK
Sbjct:    1 MGESEAK-SETSLKDQGNEFFKAGNYLKAAALYTQAIKKDPSNATLYSNRAAAFLHLVKLSKAIADAEMTINLKPEWEKGYFRKGCILEAMERYEDALAAFQIASKYNPQSSEVSKKIKILTQLAKDKKRTEELENMRSNVDMAKHFDALKSELSEKYGAEDSWKEFFSFHVETVENAVKSWHETSKVDPRVYFLLNKEKTDTEKYAPAVNIDKAFESPQTHNNCFSFLRQYAEDSFAQAACLVTPKSIISYPQVWKGQGSRKWKHGQNDGIFVQFESPLVRRLWFIPSSTEKGKTLCRDPVPLDISAHEILPRVFK 316          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: Q8RXN1_ARATH (Carboxylate clamp-tetratricopeptide repeat protein OS=Arabidopsis thaliana GN=At1g04190 PE=2 SV=1)

HSP 1 Score: 536.954 bits (1382), Expect = 0.000e+0
Identity = 252/323 (78.02%), Postives = 286/323 (88.54%), Query Frame = 2
Query:  269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAE    +  G   E SLK+KGNEFFKAGN+LKAAALYTQAIK DPSN TLYSNRAAAFL LVKL+KALADAETTI L PQWEKGYFRKGC+LEAME+Y+DALAAF++ALQYNPQS EVSRKIKRL QL K+K+RAQE++NLRSNVD+AK LE+ KSEMSE Y +E+ WKEMFSF++ETMETAVKSWHETSKVD RVYFLLDKEK+Q DKYAP VNIDKAF+SP THS+CF++LRQYAE+SFS+AACLV PKS I+YPQVWKG GSRKWK G +DG FVQFESP LRK+WFISSS E G+TLCR+P+ LDIGAHE+LPR+FKE
Sbjct:    1 MAEKAGKATNGGEAEKSLKEKGNEFFKAGNFLKAAALYTQAIKLDPSNATLYSNRAAAFLSLVKLSKALADAETTIKLNPQWEKGYFRKGCVLEAMEKYEDALAAFEMALQYNPQSTEVSRKIKRLGQLQKEKQRAQELENLRSNVDMAKHLESFKSEMSENYGTEECWKEMFSFIVETMETAVKSWHETSKVDTRVYFLLDKEKTQTDKYAPAVNIDKAFQSPDTHSNCFTYLRQYAEESFSKAACLVTPKSSISYPQVWKGVGSRKWKLGPNDGIFVQFESPSLRKVWFISSSKEKGQTLCREPQALDIGAHEILPRIFKE 323          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: V7BLJ3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G277400g PE=4 SV=1)

HSP 1 Score: 534.643 bits (1376), Expect = 0.000e+0
Identity = 257/323 (79.57%), Postives = 282/323 (87.31%), Query Frame = 2
Query:  269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAE + GSG     EMSLKD+GNEFFK+G YLKAAALYTQAIKQDPSNPTLYSNRAAA L L KLNKAL DAE TI LKPQWEKGYFRKG ILEAM+RYDDALAAFQIALQYN QS EVS+KIKR++QL KD KRAQEV+N+RSNVD+AK L+T KSEM EKY SE+ WK +FSF++ET+ETAVKSW ETS VD RVYFLLD EK+Q DKYAPVVNIDKAFESPHTH++CFSFLRQYAE+SFS+AACLV PK+IIAYPQVWKGQGSRKWKH   DGFFVQFESP LRKL+FI SS + G+ LCRDPE LDIG HEVLPRLFKE
Sbjct:    1 MAETKEGSG----SEMSLKDQGNEFFKSGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALAAFQIALQYNSQSQEVSKKIKRMNQLVKDSKRAQEVENMRSNVDVAKHLDTFKSEMVEKYGSEECWKHLFSFVVETIETAVKSWLETSTVDARVYFLLDTEKTQTDKYAPVVNIDKAFESPHTHANCFSFLRQYAEESFSKAACLVTPKNIIAYPQVWKGQGSRKWKHAHSDGFFVQFESPSLRKLFFIPSSIDKGQILCRDPEGLDIGVHEVLPRLFKE 319          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A087HKV9_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G036100 PE=4 SV=1)

HSP 1 Score: 533.487 bits (1373), Expect = 0.000e+0
Identity = 248/313 (79.23%), Postives = 282/313 (90.10%), Query Frame = 2
Query:  299 GKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            G   E SLKDKGNEFFKAGN+LKAAALYTQAIK DP+N TLYSNRAAAFL LVKL+KALADAETTI L PQWEKGYFRKG +LEAME+Y+DALAAF++ALQYNPQSAEVSRKIKRL QL ++K+RAQE++NLR+NV++AK LE+ KSEMS  Y +E+ WKEMF+FL+ETMETAVKSWHETSKVD RVYFLLDKEK+Q DKYAP VNIDKAFESPHTHS+CFS+LRQYAE+SFS+AACLVA KS I+YPQVWKGQGSRKWK GQ+DG FVQFESP +R +WFI SS E G+TLCRDP+ LDIGAHE+LPR+FKE
Sbjct:   18 GGEAEKSLKDKGNEFFKAGNFLKAAALYTQAIKLDPTNATLYSNRAAAFLSLVKLSKALADAETTIKLNPQWEKGYFRKGSVLEAMEKYEDALAAFEMALQYNPQSAEVSRKIKRLGQLLQEKQRAQELENLRTNVNMAKHLESFKSEMSASYGTEECWKEMFAFLVETMETAVKSWHETSKVDTRVYFLLDKEKTQTDKYAPAVNIDKAFESPHTHSNCFSYLRQYAEESFSKAACLVASKSSISYPQVWKGQGSRKWKLGQNDGIFVQFESPSIRNVWFIPSSKEKGQTLCRDPQALDIGAHEILPRIFKE 330          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: I3S8B3_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 533.487 bits (1373), Expect = 0.000e+0
Identity = 250/314 (79.62%), Postives = 281/314 (89.49%), Query Frame = 2
Query:  296 EGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            EG   E+SLKD+GNEFFK+G YLKAAALYTQAIK+DPSNPTL+SNRAAA L L KLNKAL DAE TI LKP+WEKG+FRKGCILEAM+RYDDALA+FQIA QYNPQS EV ++IK+++QL KD KRAQEV+N+RSNVD+AK L+TLK EMSEKY SE+SWK+MFSFL+ETMETAVKSWHETS VD RVYFL DKEK+Q DKY P+VNIDKAFESP THSSCF F RQYAE+SFSRAACLVA K+II YPQVWKGQGSRKWKH Q+DGFFVQFESP +RKLWFI SSNE G+ LCRDPE+LD+GAHEV+PRLFKE
Sbjct:    6 EGTSCEISLKDQGNEFFKSGKYLKAAALYTQAIKKDPSNPTLFSNRAAALLQLDKLNKALDDAEMTIKLKPEWEKGHFRKGCILEAMKRYDDALASFQIASQYNPQSQEVLKRIKKINQLVKDSKRAQEVENMRSNVDMAKHLDTLKPEMSEKYGSEESWKDMFSFLVETMETAVKSWHETSSVDARVYFLHDKEKTQTDKYPPIVNIDKAFESPETHSSCFPFFRQYAEESFSRAACLVAAKNIIFYPQVWKGQGSRKWKHAQNDGFFVQFESPSVRKLWFIPSSNEKGQILCRDPEILDVGAHEVVPRLFKE 319          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: HSOP2_ARATH (Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis thaliana GN=HOP2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.651e-19
Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652
            ++KGN+FFK   Y  A   YT+AIK++P +P  YSNRAA +  L  + + L DAE  I L P + KGY RKG +   M+ YD+A+  +Q  L+++P + E+   +KR  Q
Sbjct:  386 REKGNDFFKEQKYPDAVRHYTEAIKRNPKDPRAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFLKGYSRKGAVQFFMKEYDNAMETYQKGLEHDPNNQELLDGVKRCVQ 495          

HSP 2 Score: 77.0258 bits (188), Expect = 1.737e-13
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNP 610
            K KGN  F +G++  A   +T AI   P+N  L+SNR+AA   L   ++AL+DA+ T+ LKP W KGY R G     + ++D+A+ A+   L+ +P
Sbjct:    6 KAKGNAAFSSGDFNSAVNHFTDAINLTPTNHVLFSNRSAAHASLNHYDEALSDAKKTVELKPDWGKGYSRLGAAHLGLNQFDEAVEAYSKGLEIDP 101          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_CAEEL (Stress-induced-phosphoprotein 1 OS=Caenorhabditis elegans GN=sti-1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.215e-19
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIK 640
            K+KGNE+FK G+Y  A   Y +A+K+DP N  LYSNRAA    L++  +AL D +T I L  ++ KGY RK   L AM  +  A  A++ ALQ +P + E    ++
Sbjct:  144 KNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVR 249          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_CRIGR (Stress-induced-phosphoprotein 1 OS=Cricetulus griseus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.124e-17
Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL+ +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALELDSSCKEAADGYQR 470          

HSP 2 Score: 79.7221 bits (195), Expect = 1.887e-14
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRL 646
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   + ++   ++ +
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNLQLKEGLQNM 115          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: HSOP1_SOYBN (Hsp70-Hsp90 organizing protein 1 OS=Glycine max GN=HOP1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.437e-17
Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            ++KGNE FK   Y +A   YT+AIK++P +   YSNRAA +  L  + + L DAE  I L P + KGY RKG +  +M+ YD AL  ++  L+++P + E+   I+R
Sbjct:  387 REKGNELFKQQKYPEATKHYTEAIKRNPKDAKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFSKGYTRKGAVQFSMKEYDKALETYREGLKHDPNNQELLDGIRR 493          

HSP 2 Score: 83.1889 bits (204), Expect = 1.680e-15
Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSA 619
            K KGN  F AG++  A   ++ AI   PSN  LYSNR+AA   L    +ALADA+ T+ LKP W K Y R G     + R+ DA +A++  LQ +P +A
Sbjct:    6 KAKGNAAFSAGDFAAAVRHFSDAIALSPSNHVLYSNRSAAHASLQNYAEALADAQKTVDLKPDWPKAYSRLGAAHLGLRRHRDAFSAYKTGLQLDPDNA 104          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: HSOP1_ARATH (Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis thaliana GN=HOP1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.115e-17
Identity = 43/110 (39.09%), Postives = 69/110 (62.73%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652
            ++KGN+FFK   Y +A   YT+AIK++P++   YSNRAA++  L  + + L DAE  I L P + KGY RK  +   ++ YD+A+  +Q  L+++P + E+   +KR  Q
Sbjct:  387 REKGNDFFKEQKYPEAIKHYTEAIKRNPNDHKAYSNRAASYTKLGAMPEGLKDAEKCIELDPTFSKGYSRKAAVQFFLKEYDNAMETYQAGLEHDPSNQELLDGVKRCVQ 496          

HSP 2 Score: 73.1738 bits (178), Expect = 2.856e-12
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNP 610
            K KGN  F +G++  A   +T+AI   P+N  L+SNR+AA   L +  +AL+DA+ TI LKP W KGY R G     + +++ A+ A++  L  +P
Sbjct:    6 KAKGNAAFSSGDFTTAINHFTEAIALAPTNHVLFSNRSAAHASLHQYAEALSDAKETIKLKPYWPKGYSRLGAAHLGLNQFELAVTAYKKGLDVDP 101          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_BOVIN (Stress-induced-phosphoprotein 1 OS=Bos taurus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.153e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSNCKEAADGYQR 470          

HSP 2 Score: 81.6481 bits (200), Expect = 4.806e-15
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQY---NPQSAE 622
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   NPQ  E
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKQTYEEGLKHEANNPQLKE 110          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_HUMAN (Stress-induced-phosphoprotein 1 OS=Homo sapiens GN=STIP1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.927e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 470          

HSP 2 Score: 79.7221 bits (195), Expect = 1.971e-14
Identity = 44/104 (42.31%), Postives = 59/104 (56.73%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQY---NPQSAE 622
            LK+KGN+    GN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   NPQ  E
Sbjct:    7 LKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKE 110          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_RAT (Stress-induced-phosphoprotein 1 OS=Rattus norvegicus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.996e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 470          

HSP 2 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRL 646
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   + ++   ++ +
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNLQLKEGLQNM 115          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_MOUSE (Stress-induced-phosphoprotein 1 OS=Mus musculus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.558e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 470          

HSP 2 Score: 79.7221 bits (195), Expect = 2.096e-14
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRL 646
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   + ++   ++ +
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNLQLKEGLQNM 115          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_MACFA (Stress-induced-phosphoprotein 1 OS=Macaca fascicularis GN=STIP1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.558e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSRKEAADGYQR 470          

HSP 2 Score: 81.2629 bits (199), Expect = 6.307e-15
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQY---NPQSAE 622
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   NPQ  E
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVELKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKE 110          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
M1ACQ6_SOLTU0.000e+079.50Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
Q8RXN1_ARATH0.000e+078.02Carboxylate clamp-tetratricopeptide repeat protein... [more]
V7BLJ3_PHAVU0.000e+079.57Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A0A087HKV9_ARAAL0.000e+079.23Uncharacterized protein OS=Arabis alpina GN=AALP_A... [more]
I3S8B3_MEDTR0.000e+079.62Uncharacterized protein OS=Medicago truncatula PE=... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
HSOP2_ARATH4.651e-1941.82Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis th... [more]
STIP1_CAEEL5.215e-1942.45Stress-induced-phosphoprotein 1 OS=Caenorhabditis ... [more]
STIP1_CRIGR2.124e-1742.99Stress-induced-phosphoprotein 1 OS=Cricetulus gris... [more]
HSOP1_SOYBN2.437e-1741.12Hsp70-Hsp90 organizing protein 1 OS=Glycine max GN... [more]
HSOP1_ARATH3.115e-1739.09Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis th... [more]
STIP1_BOVIN3.153e-1742.99Stress-induced-phosphoprotein 1 OS=Bos taurus GN=S... [more]
STIP1_HUMAN3.927e-1742.99Stress-induced-phosphoprotein 1 OS=Homo sapiens GN... [more]
STIP1_RAT3.996e-1742.99Stress-induced-phosphoprotein 1 OS=Rattus norvegic... [more]
STIP1_MOUSE4.558e-1742.99Stress-induced-phosphoprotein 1 OS=Mus musculus GN... [more]
STIP1_MACFA4.558e-1742.99Stress-induced-phosphoprotein 1 OS=Macaca fascicul... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 49..82
e-value: 8.1
score: 15.4
coord: 83..116
e-value: 6.8E-5
score: 32.3
coord: 15..48
e-value: 0.0071
score: 25.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 15..48
score: 9.352
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 49..82
score: 6.018
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 83..116
score: 9.765
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 16..144
e-value: 1.2E-33
score: 115.4
IPR011990Tetratricopeptide-like helical domainPFAMPF13414TPR_11coord: 22..60
e-value: 1.4E-9
score: 37.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 17..126
IPR013105Tetratricopeptide repeat 2PFAMPF07719TPR_2coord: 84..115
e-value: 8.6E-6
score: 25.4
NoneNo IPR availablePANTHERPTHR22904:SF289CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN-RELATEDcoord: 13..193
NoneNo IPR availablePANTHERPTHR22904:SF289CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN-RELATEDcoord: 252..311
NoneNo IPR availablePANTHERPTHR22904TPR REPEAT CONTAINING PROTEINcoord: 252..311
coord: 13..193
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 15..116
score: 21.994

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0001270 ID=g.arboreum_cottongen_reftransV1_0001270; Name=g.arboreum_cottongen_reftransV1_0001270; organism=Gossypium arboreum; type=contig; length=1709bp
GTTTAGTTTACCCATAATTTTTTTAAGGAAAAAACCAGAGCTCACTCTTG
TAATTTTGCTTAGGGTTTTCTTTTAATCAAAACTAATCTGATTCTCCTTT
CTACTCCAAAATCACCAAAAGCCCAGATTTTGTTTAGAAATTAGAAAACT
CCATCGTTTATACCGCTGTTAAATACCTCCATAGACATCATCCCCTCAGA
AAAGTAGAAGCTTCTCTCTCCCATTAACCCTAACTACACAACAAATAAAA
TTACTTCAAAACAATAGGATGGCAGAAGCAGAGGTAGGATCTGGTGAAGG
AAAGCCCCAAGAGATGTCGTTGAAGGATAAAGGGAATGAGTTTTTCAAGG
CTGGGAACTACCTTAAAGCTGCTGCTCTTTACACTCAGGCCATTAAACAA
GACCCTTCAAATCCCACTCTTTATAGCAATCGAGCAGCAGCGTTTCTACA
TTTGGTTAAACTTAACAAAGCGCTGGCTGATGCTGAGACAACAATTACTT
TGAAACCTCAGTGGGAAAAGGGATATTTTCGAAAAGGATGCATTTTAGAG
GCTATGGAACGATATGACGATGCTTTAGCTGCCTTCCAAATAGCTTTGCA
GTACAACCCACAAAGTGCAGAAGTCTCAAGAAAAATTAAGAGACTTTCAC
AGCTTGCAAAAGATAAAAAGCGAGCTCAAGAAGTGCAAAACTTGCGATCC
AATGTAGATATAGCAAAAAGCTTGGAAACATTGAAATCTGAAATGTCTGA
AAAGTACAAATCGGAAGATAGTTGGAAAGAGATGTTTTCTTTTCTTATTG
AGACAATGGAAACAGCTGTAAAATCATGGCATGAGACTTCCAAAGTGGAT
CCTAGAGTCTACTTCCTTCTTGATAAGGAGAAGAGCCAAGCCGATAAATA
TGCTCCAGTTGTCAATATTGACAAGGCTTTTGAATCGCCTCATACGCACA
GCAGTTGTTTTTCATTTCTTAGGCAATATGCTGAAGATTCTTTCTCTAGA
GCAGCTTGTTTAGTTGCTCCTAAAAGTATCATAGCTTATCCACAGGTCTG
GAAAGGTCAGGGTTCAAGGAAGTGGAAGCATGGGCAACATGATGGTTTCT
TTGTTCAATTCGAGTCACCACTCTTGCGAAAACTATGGTTTATTTCGAGT
TCCAATGAGATGGGGAAGACACTGTGCAGGGATCCAGAGGTTCTAGATAT
AGGTGCACATGAAGTACTTCCACGCCTTTTCAAAGAAAATCTATCCAGTT
CCTCATGAGCTTTATCTTAGGCTGAAGGAAATTGCTAGGCATGCCGGTGG
ACTTTGATTGCGAGGTTTACATATGAAAAAAGGTACCAACAACATAGCGT
GCTTGCTTGTTACTTCGAGCTGTATATGAATTTCCTTTTATATGTGAAAA
CTCGCCAACTAGGTACACTTTTTCGAGTCACATAGCACTCATTTTCTTGG
TTTTGAAAAATTTTCTAAAGAAGTTTACAAGCCTTTTTTGAGTGATTACA
TTTTATGGGTGTTTGTTAAAACTGCTTTCTTGCCTTAAGTGATTCGCGGG
TTTCGGTTCTTGAGTTGGTTATATGTTGGAAGAACAGTAAAGCTAGTTGG
TGTAGAACTTATTCTCTTGTTTTCTGTTGTAATTATATGTAGAAAGTTAT
CGATAAGGGCTGATGTAGTTTTGTTTCATTTATGCATGAAGGGTTTCTTT
CTTTTAAAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013105TPR_2
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding