g.arboreum_cottongen_reftransV1_0001270, g.arboreum_cottongen_reftransV1_0001270 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: D7T726_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03920 PE=4 SV=1) HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0 Identity = 260/324 (80.25%), Postives = 292/324 (90.12%), Query Frame = 2 Query: 269 MAEAE-VGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 M EA+ G + +++SLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKL KALADAETTITL P WEKGYFRKGC+LEAMERYDD+L AF+IAL++NPQS+EVSRKIK+L+QLA+DKKR QEV+N RSNVD+AK LETLKSE+SEKY + WK MFSF +ET+ETA+KSWHETSKVD RVYFLLDKEK+Q DKYAPVVNIDKAFESPHTH SCF+FLR YAE+SFS+AACLVAPKSII+YPQVWKGQGSRKWKHGQ DGFFVQFESP L+KLWF+ SS E G+ LCRDPEVLDIG HE+LPR+FK+ Sbjct: 1 MEEADGKGRAASESEQVSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLTKALADAETTITLNPNWEKGYFRKGCVLEAMERYDDSLVAFRIALEHNPQSSEVSRKIKKLTQLARDKKRVQEVENKRSNVDMAKHLETLKSELSEKYGDAEHWKSMFSFTVETIETAIKSWHETSKVDARVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHKSCFTFLRDYAEESFSKAACLVAPKSIISYPQVWKGQGSRKWKHGQSDGFFVQFESPSLQKLWFVPSSTEKGQLLCRDPEVLDIGVHELLPRIFKQ 324
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: M5Y4T5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008502mg PE=4 SV=1) HSP 1 Score: 551.977 bits (1421), Expect = 0.000e+0 Identity = 263/327 (80.43%), Postives = 292/327 (89.30%), Query Frame = 2 Query: 269 MAEA----EVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 MAEA + G+ G E SLKDKGNE FKAGNYLKAAALYTQAIKQDP+NPTLYSNRAAAFL LVKL+KALADAETTI L PQWEKGYFRKGCILEAME+YDDALAAFQ ALQYN QS EVSRKIKR+SQLA+DKKRAQEV+ +RSNVD+A+ L+ LKSEMS K SE+ W++MFSFL+ETMETA+KSWHETSKV+ RVYFLLDKEK+ +KYAP VNIDKAFESPHTH SCFSFLRQYAEDSFSRAACLV PKSI++YPQVWKGQGSRKWKHGQHDGFFVQFE+P LRKLWFI SS+E+G+ LCRDPE LDIGAHE++PRLFK+ Sbjct: 1 MAEAGGSDKAGASAGGGVE-SLKDKGNEHFKAGNYLKAAALYTQAIKQDPNNPTLYSNRAAAFLQLVKLSKALADAETTIKLNPQWEKGYFRKGCILEAMEQYDDALAAFQTALQYNSQSTEVSRKIKRISQLARDKKRAQEVEKMRSNVDMARQLDKLKSEMSGKRGSEECWEDMFSFLVETMETAIKSWHETSKVEARVYFLLDKEKTDTEKYAPAVNIDKAFESPHTHGSCFSFLRQYAEDSFSRAACLVTPKSIMSYPQVWKGQGSRKWKHGQHDGFFVQFETPFLRKLWFIPSSSELGQILCRDPEDLDIGAHELIPRLFKQ 326
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0A0LNU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G223130 PE=4 SV=1) HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0 Identity = 259/326 (79.45%), Postives = 286/326 (87.73%), Query Frame = 2 Query: 269 MAEAEVGSGEGKP---QEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 MAEAE GS G E SLKDKGNEFFKAGNYLKAAALYTQAIK DPSN LYSNRAAAFLHLVKLNKALADAE TI L PQWEKGYFRKGCILEAME+YDDAL+AFQ ALQYNPQSAEVSRKIKR+SQL KDKKRAQEV+ RSN+D+ K L+ LKSE+SEKY SE+ WK++FSFL+ETME AV+SWHETS VD +VY+LLD EK+ +KYAPVVNIDKAFESPHTHS CF FLR+YAEDS SRAACLV PKS+I+YPQVWKGQGSRKWKHGQHDGFFVQ E+P LRKLWF+ SS+E+G+ LCRDPEVLDI AHE+LPR+FKE Sbjct: 1 MAEAETGSATGNSGGVPEPSLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNHALYSNRAAAFLHLVKLNKALADAEMTIKLSPQWEKGYFRKGCILEAMEKYDDALSAFQTALQYNPQSAEVSRKIKRVSQLVKDKKRAQEVEKKRSNIDMTKHLDKLKSELSEKYGSEECWKDIFSFLVETMEAAVRSWHETSNVDAKVYYLLDNEKTDTEKYAPVVNIDKAFESPHTHSDCFQFLRKYAEDSVSRAACLVTPKSLISYPQVWKGQGSRKWKHGQHDGFFVQLETPSLRKLWFVPSSSELGRPLCRDPEVLDIAAHELLPRIFKE 326
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0B2PR45_GLYSO (Heat shock protein STI OS=Glycine soja GN=glysoja_034314 PE=4 SV=1) HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0 Identity = 256/310 (82.58%), Postives = 281/310 (90.65%), Query Frame = 2 Query: 311 EMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKEN 1240 EMSLKD+GNEFFK+G YLKAAALYTQAIKQDPSNPTLYSNRAAA L L KLNKAL DAE TI LKPQWEKGYFRKG ILEAM+RYDDALAAFQIALQYNPQS EV++KIK+++QL KD KRAQEV+N+RSNVD+AK L+T K+EMS KY E+ WK++FSFL+ETMETAVKSWH+TS VD RVYFLLDKEK+ DKYAPVVNIDKAFESPHTH +CF+FLRQYAE+SFS+AACLV PK+IIAYPQVWKGQG RKWKH Q DGFFVQFESP LRKLWFI SSNE G+TLCRDPEVLDIGAHEVLPRLFKEN Sbjct: 12 EMSLKDQGNEFFKSGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALAAFQIALQYNPQSQEVTKKIKKINQLMKDSKRAQEVENMRSNVDMAKHLDTFKTEMSGKYGLEEGWKDLFSFLVETMETAVKSWHKTSSVDARVYFLLDKEKTDTDKYAPVVNIDKAFESPHTHGNCFAFLRQYAEESFSKAACLVTPKNIIAYPQVWKGQGPRKWKHAQSDGFFVQFESPSLRKLWFIPSSNEKGQTLCRDPEVLDIGAHEVLPRLFKEN 321
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A068TUS5_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_3 OS=Coffea canephora GN=GSCOC_T00026126001 PE=4 SV=1) HSP 1 Score: 545.043 bits (1403), Expect = 0.000e+0 Identity = 258/318 (81.13%), Postives = 287/318 (90.25%), Query Frame = 2 Query: 284 VGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 +G E K E SLKD+GNEFFK+GNYLKAAALYTQAIKQDP+N TLYSNRAAAFLHLVKLNKALADAETTITLKP WEKGYFRKGC+LEAMERYDDAL+AF++AL+YNPQS+EVSRKIKRLSQL K+KKRAQEV+++RSNVD+AK L+ LKSE+S KY +E+ E+FSFL+ETME AVKSWHE+SKVD RVYFLLDK+K+ KYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLV PKSII+YPQVWKGQGSRKWKHGQ DGFFVQFE+P +RKLWF+ SS E G+TLCRDP LDI HEVLPRLFKE Sbjct: 1 MGESEAK-MEQSLKDQGNEFFKSGNYLKAAALYTQAIKQDPNNATLYSNRAAAFLHLVKLNKALADAETTITLKPDWEKGYFRKGCVLEAMERYDDALSAFEMALKYNPQSSEVSRKIKRLSQLEKEKKRAQEVESMRSNVDMAKHLDALKSELSGKYGAEEISGEIFSFLVETMEMAVKSWHESSKVDARVYFLLDKDKTDTQKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVTPKSIISYPQVWKGQGSRKWKHGQTDGFFVQFETPSIRKLWFLPSSTEKGQTLCRDPVALDISVHEVLPRLFKE 317
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0B2NXV1_GLYSO (Heat shock protein STI OS=Glycine soja GN=glysoja_022876 PE=4 SV=1) HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0 Identity = 260/323 (80.50%), Postives = 286/323 (88.54%), Query Frame = 2 Query: 269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 MAE + GSG EMSLKD+GNEFFK+G YLKAAALYTQAIK DPSNPTLYSNRAAA L L KLNKAL DAE TI LKPQWEKGYFRKG ILEAM+RYDDALA+FQIALQYNPQS EVS+KIK+++QL KD KRAQEV+N+RSNVD+AK L+T K+EMS KY SE+ K++FSFL+ETMETAVKSWHETS VD +VYFLLDKEK+ DKYAPVVNIDKAFESPHTH +CF+FLRQYAE+SFS+AACLV PK+IIAYPQVWKGQGSRKWKH Q DGFFVQFESP LRKLWFI SSNE G+T CRDPEVLDIGAHEVLPRLFKE Sbjct: 1 MAETKEGSG----SEMSLKDQGNEFFKSGKYLKAAALYTQAIKLDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALASFQIALQYNPQSQEVSKKIKKINQLVKDSKRAQEVENMRSNVDMAKHLDTFKTEMSGKYGSEECLKDLFSFLVETMETAVKSWHETSSVDAKVYFLLDKEKTDTDKYAPVVNIDKAFESPHTHGNCFAFLRQYAEESFSKAACLVTPKNIIAYPQVWKGQGSRKWKHAQSDGFFVQFESPSLRKLWFIPSSNEKGQTWCRDPEVLDIGAHEVLPRLFKE 319
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: C6TJ63_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0 Identity = 260/323 (80.50%), Postives = 286/323 (88.54%), Query Frame = 2 Query: 269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 MAE + GSG EMSLKD+GNEFFK+G YLKAAALYTQAIK DPSNPTLYSNRAAA L L KLNKAL DAE TI LKPQWEKGYFRKG ILEAM+RYDDALA+FQIALQYNPQS EVS+KIK+++QL KD KRAQEV+N+RSNVD+AK L+T K+EMS KY SE+ K++FSFL+ETMETAVKSWHETS VD +VYFLLDKEK+ DKYAPVVNIDKAFESPHTH +CF+FLRQYAE+SFS+AACLV PK+IIAYPQVWKGQGSRKWKH Q DGFFVQFESP LRKLWFI SSNE G+T CRDPEVLDIGAHEVLPRLFKE Sbjct: 1 MAETKEGSG----SEMSLKDQGNEFFKSGKYLKAAALYTQAIKLDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALASFQIALQYNPQSQEVSKKIKKINQLVKDSKRAQEVENMRSNVDMAKHLDTFKTEMSGKYGSEECLKDLFSFLVETMETAVKSWHETSSVDAKVYFLLDKEKTDTDKYAPVVNIDKAFESPHTHGNCFAFLRQYAEESFSKAACLVTPKNIIAYPQVWKGQGSRKWKHAQSDGFFVQFESPSLRKLWFIPSSNEKGQTWCRDPEVLDIGAHEVLPRLFKE 319
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: R0IMB9_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10009715mg PE=4 SV=1) HSP 1 Score: 542.347 bits (1396), Expect = 0.000e+0 Identity = 254/323 (78.64%), Postives = 292/323 (90.40%), Query Frame = 2 Query: 269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 MAE+ + G+ E SLKDKGNEFFKAGN+LKAAALYTQAIK DPSN TLYSNRAAAFL LVKL+KALADA+TTI L PQWEKGYFRKGC+LEAME+Y+DALAAF++ALQ+NPQS EVSRKIKRL QL KDK+RAQE++NLRSNVD+AK LE+ KSEMS+ Y +E+SWKEMFSF++ETMETAVKSWHETSKVD RVYFLLDKEK+Q DKYAP VNIDKAF+SP THS+CF++LRQYAE+SFS+AACLVAPKS I+YPQVWKGQGSRKWK GQ+DG FVQFESP +RK+WFISSS E G+TLCR+P+ LDIGAHE+LPR+FKE Sbjct: 2 MAESGKATNGGEA-EKSLKDKGNEFFKAGNFLKAAALYTQAIKLDPSNATLYSNRAAAFLSLVKLSKALADADTTIKLNPQWEKGYFRKGCVLEAMEKYEDALAAFEMALQHNPQSTEVSRKIKRLGQLQKDKQRAQELENLRSNVDMAKHLESFKSEMSDAYGTEESWKEMFSFIVETMETAVKSWHETSKVDTRVYFLLDKEKTQTDKYAPAVNIDKAFQSPDTHSNCFTYLRQYAEESFSKAACLVAPKSSISYPQVWKGQGSRKWKLGQNDGIFVQFESPAIRKVWFISSSKEKGQTLCREPQALDIGAHEILPRIFKE 323
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A072VSG1_MEDTR (RNA polymerase II-associated-like protein OS=Medicago truncatula GN=MTR_1g041435 PE=4 SV=1) HSP 1 Score: 537.724 bits (1384), Expect = 0.000e+0 Identity = 252/314 (80.25%), Postives = 283/314 (90.13%), Query Frame = 2 Query: 296 EGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 EG E+SLKD+GNEFFK+G YLKAAALYTQAIK+DPSNPTL+SNRAAA L L KLNKAL DAE TI LKP+WEKG+FRKGCILEAM+RYDDALA+FQIA QYNPQS EV +KIK+++QL KD KRAQEV+N+RSNVD+AK L+TLK EMSEKY SE+SWK+MFSFL+ETMETAVKSWHETS VD RVYFL DKEK+Q DKY P+VNIDKAFESP THSSCF FLRQYAE+SFSRAACLVA K+II+YPQVWKGQGSRKWKH Q+DGFFVQFESP +RKLWFI SSNE G+ LCRDPE+LD+GAHEV+PRLFKE Sbjct: 6 EGTSCEISLKDQGNEFFKSGKYLKAAALYTQAIKKDPSNPTLFSNRAAALLQLDKLNKALDDAEMTIKLKPEWEKGHFRKGCILEAMKRYDDALASFQIASQYNPQSQEVLKKIKKINQLVKDSKRAQEVENMRSNVDMAKHLDTLKPEMSEKYGSEESWKDMFSFLVETMETAVKSWHETSSVDARVYFLHDKEKTQTDKYPPIVNIDKAFESPETHSSCFPFLRQYAEESFSRAACLVAAKNIISYPQVWKGQGSRKWKHAQNDGFFVQFESPSVRKLWFIPSSNEKGQILCRDPEILDVGAHEVVPRLFKE 319
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: K4CVN1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc09g082540.2 PE=4 SV=1) HSP 1 Score: 537.339 bits (1383), Expect = 0.000e+0 Identity = 250/318 (78.62%), Postives = 286/318 (89.94%), Query Frame = 2 Query: 284 VGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 +G + K E SLKD+GNEFFKAGNYLKAAALYTQAIK+DPSN TLYSNRAAAFLHLVKL+KALADAE TI LKP+WEKGYFRKGCILEAMERY+DALAAF+IA +YNPQS+EVS+KIK L+QLAKDKKR +E++N+R+N+D+AK LKSE+SEKY +ED WKE FSF +ET+E AVKSWHETSKVDPRVYFLL+KEK+ +KYAP VNIDKAFESPHTHS+CF+FLRQYAEDSF++AACLV PKSII+YPQVWKGQGSRKWKHGQ+DG FVQFESPL+RKLWFI SS E GKTLCRDP LDI AHE+LPR+FK+ Sbjct: 1 MGESDAKA-ETSLKDQGNEFFKAGNYLKAAALYTQAIKKDPSNATLYSNRAAAFLHLVKLSKALADAEMTINLKPEWEKGYFRKGCILEAMERYEDALAAFRIASKYNPQSSEVSKKIKTLTQLAKDKKRTEELENMRTNIDMAKHFHALKSELSEKYGAEDGWKEFFSFHVETVEGAVKSWHETSKVDPRVYFLLNKEKTDTEKYAPAVNIDKAFESPHTHSNCFAFLRQYAEDSFAQAACLVTPKSIISYPQVWKGQGSRKWKHGQNDGIFVQFESPLVRKLWFIPSSTEKGKTLCRDPVALDISAHEILPRVFKQ 317
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: RPAP3_RAT (RNA polymerase II-associated protein 3 OS=Rattus norvegicus GN=Rpap3 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.062e-13 Identity = 38/113 (33.63%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 314 MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652 + LK+KGN++FK G Y +A YT+ + DP NP L +NRA+A+ L K A +D I L + K Y R+G A+++ +DA + L+ P + E + +++++ Q Sbjct: 134 LVLKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAIALSRSYTKAYARRGAARFALQKLEDARKDYVKVLELEPDNFEATNELRKIDQ 246 HSP 2 Score: 63.5438 bits (153), Expect = 2.766e-9 Identity = 42/141 (29.79%), Postives = 70/141 (49.65%), Query Frame = 2 Query: 272 AEAEVGSGE---GKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEV 685 AE E + E G+ + ++ KD GN FFK G Y +A YT+ I D +N L +NRA A+L + K +A D I L + K + R+G + + ++A F+ L P + + ++ R+ + +K R +V Sbjct: 266 AEGERKANEDQRGRQKAIAEKDLGNGFFKEGKYEQAIECYTRGIAADSTNALLPANRAMAYLKVQKYEEAERDCTQAILLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAVTELSRIKKELIEKGRWDDV 406
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: RPAP3_HUMAN (RNA polymerase II-associated protein 3 OS=Homo sapiens GN=RPAP3 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.402e-13 Identity = 37/113 (32.74%), Postives = 66/113 (58.41%), Query Frame = 2 Query: 314 MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652 + LK+KGN++FK G Y +A YT+ + DP NP L +NRA+A+ L K A +D + L + K Y R+G A+++ ++A ++ L+ P + E + +++++SQ Sbjct: 134 LVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELRKISQ 246 HSP 2 Score: 65.4698 bits (158), Expect = 8.634e-10 Identity = 39/128 (30.47%), Postives = 66/128 (51.56%), Query Frame = 2 Query: 281 EVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKD 664 ++ + + K Q +S KD+GN FFK G Y +A YT+ I D +N L +NRA A+L + K +A D I L + K + R+G + + ++A F+ L P + + + LS++ K+ Sbjct: 272 QIEAQQNKQQAISEKDRGNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQA---VTELSKIKKE 396
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STI1L_PLAF7 (STI1-like protein OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0324 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.219e-13 Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 2 Query: 323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR----LSQLAKDKKRAQE 682 K+KGNE+FK ++ A Y +AI+++P++ LYSNRAAA L++ AL D I L P + K Y RKG + M+ Y AL A+ L+ +P + E +R + +++K +K +E Sbjct: 382 KNKGNEYFKNNDFPNAKKEYDEAIRRNPNDAKLYSNRAAALTKLIEYPSALEDVMKAIELDPTFVKAYSRKGNLHFFMKDYYKALQAYNKGLELDPNNKECLEGYQRCAFKIDEMSKSEKVDEE 505 HSP 2 Score: 70.8626 bits (172), Expect = 1.468e-11 Identity = 45/153 (29.41%), Postives = 77/153 (50.33%), Query Frame = 2 Query: 299 GKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVS---RKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMS 748 K + LK+ GN+ F+ G Y +A ++ AI DP + LYSN + AF L + +AL A I++K W KGY RKGC + + +A + L+ +P + + K++ + L + AQ + +L + ++ L++ K E S Sbjct: 3 NKEEAQRLKELGNKCFQEGKYEEAVKYFSDAITNDPLDHVLYSNLSGAFASLGRFYEALESANKCISIKKDWPKGYIRKGCAEHGLRQLSNAEKTYLEGLKIDPNNKSLQDALSKVRNENML----ENAQLIAHLNNIIENDPQLKSYKEENS 151
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: PPP5_HUMAN (Serine/threonine-protein phosphatase 5 OS=Homo sapiens GN=PPP5C PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.608e-13 Identity = 48/167 (28.74%), Postives = 82/167 (49.10%), Query Frame = 2 Query: 320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKY---KSEDSWKEMFSFLIETME 811 LK + N++FKA +Y A Y+QAI+ +PSN Y NR+ A+L AL DA I L ++ KGY+R+ A+ ++ AL ++ ++ P + K + +++ K K + + + SL+ + ++Y K ED K SF+ E M+ Sbjct: 31 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDG-KVTISFMKELMQ 196
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: PPP5_SOLLC (Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.407e-13 Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIK 640 LK NE FK Y +A LYTQAI+ + N Y+NRA A L + A+ D I + P++ KGY+R+G AM ++ DAL FQ + P + ++K+K Sbjct: 17 LKQLANEAFKGHKYSQAIDLYTQAIELNGENAVYYANRAFAHTKLEEYGSAIQDGTRAIEIDPRYSKGYYRRGAAYLAMGKFKDALKDFQQVKKLCPNDPDATKKLK 123 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0001270 ID=g.arboreum_cottongen_reftransV1_0001270; Name=g.arboreum_cottongen_reftransV1_0001270; organism=Gossypium arboreum; type=contig; length=1709bpback to top |