g.arboreum_cottongen_reftransV1_0001270, g.arboreum_cottongen_reftransV1_0001270 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0001270
Unique Nameg.arboreum_cottongen_reftransV1_0001270
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1709
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr7chromosomeg.arboreum_cottongen_reftransV1_0001270:1..1707 .
Chr7:37337523..37341663 -		n/a
Homology
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: D7T726_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03920 PE=4 SV=1)

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 260/324 (80.25%), Postives = 292/324 (90.12%), Query Frame = 2 
Query:  269 MAEAE-VGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            M EA+  G    + +++SLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKL KALADAETTITL P WEKGYFRKGC+LEAMERYDD+L AF+IAL++NPQS+EVSRKIK+L+QLA+DKKR QEV+N RSNVD+AK LETLKSE+SEKY   + WK MFSF +ET+ETA+KSWHETSKVD RVYFLLDKEK+Q DKYAPVVNIDKAFESPHTH SCF+FLR YAE+SFS+AACLVAPKSII+YPQVWKGQGSRKWKHGQ DGFFVQFESP L+KLWF+ SS E G+ LCRDPEVLDIG HE+LPR+FK+
Sbjct:    1 MEEADGKGRAASESEQVSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLTKALADAETTITLNPNWEKGYFRKGCVLEAMERYDDSLVAFRIALEHNPQSSEVSRKIKKLTQLARDKKRVQEVENKRSNVDMAKHLETLKSELSEKYGDAEHWKSMFSFTVETIETAIKSWHETSKVDARVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHKSCFTFLRDYAEESFSKAACLVAPKSIISYPQVWKGQGSRKWKHGQSDGFFVQFESPSLQKLWFVPSSTEKGQLLCRDPEVLDIGVHELLPRIFKQ 324
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BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: M5Y4T5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008502mg PE=4 SV=1)

HSP 1 Score: 551.977 bits (1421), Expect = 0.000e+0
Identity = 263/327 (80.43%), Postives = 292/327 (89.30%), Query Frame = 2 
Query:  269 MAEA----EVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEA    + G+  G   E SLKDKGNE FKAGNYLKAAALYTQAIKQDP+NPTLYSNRAAAFL LVKL+KALADAETTI L PQWEKGYFRKGCILEAME+YDDALAAFQ ALQYN QS EVSRKIKR+SQLA+DKKRAQEV+ +RSNVD+A+ L+ LKSEMS K  SE+ W++MFSFL+ETMETA+KSWHETSKV+ RVYFLLDKEK+  +KYAP VNIDKAFESPHTH SCFSFLRQYAEDSFSRAACLV PKSI++YPQVWKGQGSRKWKHGQHDGFFVQFE+P LRKLWFI SS+E+G+ LCRDPE LDIGAHE++PRLFK+
Sbjct:    1 MAEAGGSDKAGASAGGGVE-SLKDKGNEHFKAGNYLKAAALYTQAIKQDPNNPTLYSNRAAAFLQLVKLSKALADAETTIKLNPQWEKGYFRKGCILEAMEQYDDALAAFQTALQYNSQSTEVSRKIKRISQLARDKKRAQEVEKMRSNVDMARQLDKLKSEMSGKRGSEECWEDMFSFLVETMETAIKSWHETSKVEARVYFLLDKEKTDTEKYAPAVNIDKAFESPHTHGSCFSFLRQYAEDSFSRAACLVTPKSIMSYPQVWKGQGSRKWKHGQHDGFFVQFETPFLRKLWFIPSSSELGQILCRDPEDLDIGAHELIPRLFKQ 326
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BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0A0LNU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G223130 PE=4 SV=1)

HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0
Identity = 259/326 (79.45%), Postives = 286/326 (87.73%), Query Frame = 2 
Query:  269 MAEAEVGSGEGKP---QEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEAE GS  G      E SLKDKGNEFFKAGNYLKAAALYTQAIK DPSN  LYSNRAAAFLHLVKLNKALADAE TI L PQWEKGYFRKGCILEAME+YDDAL+AFQ ALQYNPQSAEVSRKIKR+SQL KDKKRAQEV+  RSN+D+ K L+ LKSE+SEKY SE+ WK++FSFL+ETME AV+SWHETS VD +VY+LLD EK+  +KYAPVVNIDKAFESPHTHS CF FLR+YAEDS SRAACLV PKS+I+YPQVWKGQGSRKWKHGQHDGFFVQ E+P LRKLWF+ SS+E+G+ LCRDPEVLDI AHE+LPR+FKE
Sbjct:    1 MAEAETGSATGNSGGVPEPSLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNHALYSNRAAAFLHLVKLNKALADAEMTIKLSPQWEKGYFRKGCILEAMEKYDDALSAFQTALQYNPQSAEVSRKIKRVSQLVKDKKRAQEVEKKRSNIDMTKHLDKLKSELSEKYGSEECWKDIFSFLVETMEAAVRSWHETSNVDAKVYYLLDNEKTDTEKYAPVVNIDKAFESPHTHSDCFQFLRKYAEDSVSRAACLVTPKSLISYPQVWKGQGSRKWKHGQHDGFFVQLETPSLRKLWFVPSSSELGRPLCRDPEVLDIAAHELLPRIFKE 326
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BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0B2PR45_GLYSO (Heat shock protein STI OS=Glycine soja GN=glysoja_034314 PE=4 SV=1)

HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0
Identity = 256/310 (82.58%), Postives = 281/310 (90.65%), Query Frame = 2 
Query:  311 EMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKEN 1240
            EMSLKD+GNEFFK+G YLKAAALYTQAIKQDPSNPTLYSNRAAA L L KLNKAL DAE TI LKPQWEKGYFRKG ILEAM+RYDDALAAFQIALQYNPQS EV++KIK+++QL KD KRAQEV+N+RSNVD+AK L+T K+EMS KY  E+ WK++FSFL+ETMETAVKSWH+TS VD RVYFLLDKEK+  DKYAPVVNIDKAFESPHTH +CF+FLRQYAE+SFS+AACLV PK+IIAYPQVWKGQG RKWKH Q DGFFVQFESP LRKLWFI SSNE G+TLCRDPEVLDIGAHEVLPRLFKEN
Sbjct:   12 EMSLKDQGNEFFKSGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALAAFQIALQYNPQSQEVTKKIKKINQLMKDSKRAQEVENMRSNVDMAKHLDTFKTEMSGKYGLEEGWKDLFSFLVETMETAVKSWHKTSSVDARVYFLLDKEKTDTDKYAPVVNIDKAFESPHTHGNCFAFLRQYAEESFSKAACLVTPKNIIAYPQVWKGQGPRKWKHAQSDGFFVQFESPSLRKLWFIPSSNEKGQTLCRDPEVLDIGAHEVLPRLFKEN 321
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A068TUS5_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_3 OS=Coffea canephora GN=GSCOC_T00026126001 PE=4 SV=1)

HSP 1 Score: 545.043 bits (1403), Expect = 0.000e+0
Identity = 258/318 (81.13%), Postives = 287/318 (90.25%), Query Frame = 2 
Query:  284 VGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            +G  E K  E SLKD+GNEFFK+GNYLKAAALYTQAIKQDP+N TLYSNRAAAFLHLVKLNKALADAETTITLKP WEKGYFRKGC+LEAMERYDDAL+AF++AL+YNPQS+EVSRKIKRLSQL K+KKRAQEV+++RSNVD+AK L+ LKSE+S KY +E+   E+FSFL+ETME AVKSWHE+SKVD RVYFLLDK+K+   KYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLV PKSII+YPQVWKGQGSRKWKHGQ DGFFVQFE+P +RKLWF+ SS E G+TLCRDP  LDI  HEVLPRLFKE
Sbjct:    1 MGESEAK-MEQSLKDQGNEFFKSGNYLKAAALYTQAIKQDPNNATLYSNRAAAFLHLVKLNKALADAETTITLKPDWEKGYFRKGCVLEAMERYDDALSAFEMALKYNPQSSEVSRKIKRLSQLEKEKKRAQEVESMRSNVDMAKHLDALKSELSGKYGAEEISGEIFSFLVETMEMAVKSWHESSKVDARVYFLLDKDKTDTQKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVTPKSIISYPQVWKGQGSRKWKHGQTDGFFVQFETPSIRKLWFLPSSTEKGQTLCRDPVALDISVHEVLPRLFKE 317
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0B2NXV1_GLYSO (Heat shock protein STI OS=Glycine soja GN=glysoja_022876 PE=4 SV=1)

HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0
Identity = 260/323 (80.50%), Postives = 286/323 (88.54%), Query Frame = 2 
Query:  269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAE + GSG     EMSLKD+GNEFFK+G YLKAAALYTQAIK DPSNPTLYSNRAAA L L KLNKAL DAE TI LKPQWEKGYFRKG ILEAM+RYDDALA+FQIALQYNPQS EVS+KIK+++QL KD KRAQEV+N+RSNVD+AK L+T K+EMS KY SE+  K++FSFL+ETMETAVKSWHETS VD +VYFLLDKEK+  DKYAPVVNIDKAFESPHTH +CF+FLRQYAE+SFS+AACLV PK+IIAYPQVWKGQGSRKWKH Q DGFFVQFESP LRKLWFI SSNE G+T CRDPEVLDIGAHEVLPRLFKE
Sbjct:    1 MAETKEGSG----SEMSLKDQGNEFFKSGKYLKAAALYTQAIKLDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALASFQIALQYNPQSQEVSKKIKKINQLVKDSKRAQEVENMRSNVDMAKHLDTFKTEMSGKYGSEECLKDLFSFLVETMETAVKSWHETSSVDAKVYFLLDKEKTDTDKYAPVVNIDKAFESPHTHGNCFAFLRQYAEESFSKAACLVTPKNIIAYPQVWKGQGSRKWKHAQSDGFFVQFESPSLRKLWFIPSSNEKGQTWCRDPEVLDIGAHEVLPRLFKE 319
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: C6TJ63_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0
Identity = 260/323 (80.50%), Postives = 286/323 (88.54%), Query Frame = 2 
Query:  269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAE + GSG     EMSLKD+GNEFFK+G YLKAAALYTQAIK DPSNPTLYSNRAAA L L KLNKAL DAE TI LKPQWEKGYFRKG ILEAM+RYDDALA+FQIALQYNPQS EVS+KIK+++QL KD KRAQEV+N+RSNVD+AK L+T K+EMS KY SE+  K++FSFL+ETMETAVKSWHETS VD +VYFLLDKEK+  DKYAPVVNIDKAFESPHTH +CF+FLRQYAE+SFS+AACLV PK+IIAYPQVWKGQGSRKWKH Q DGFFVQFESP LRKLWFI SSNE G+T CRDPEVLDIGAHEVLPRLFKE
Sbjct:    1 MAETKEGSG----SEMSLKDQGNEFFKSGKYLKAAALYTQAIKLDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALASFQIALQYNPQSQEVSKKIKKINQLVKDSKRAQEVENMRSNVDMAKHLDTFKTEMSGKYGSEECLKDLFSFLVETMETAVKSWHETSSVDAKVYFLLDKEKTDTDKYAPVVNIDKAFESPHTHGNCFAFLRQYAEESFSKAACLVTPKNIIAYPQVWKGQGSRKWKHAQSDGFFVQFESPSLRKLWFIPSSNEKGQTWCRDPEVLDIGAHEVLPRLFKE 319
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: R0IMB9_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10009715mg PE=4 SV=1)

HSP 1 Score: 542.347 bits (1396), Expect = 0.000e+0
Identity = 254/323 (78.64%), Postives = 292/323 (90.40%), Query Frame = 2 
Query:  269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAE+   +  G+  E SLKDKGNEFFKAGN+LKAAALYTQAIK DPSN TLYSNRAAAFL LVKL+KALADA+TTI L PQWEKGYFRKGC+LEAME+Y+DALAAF++ALQ+NPQS EVSRKIKRL QL KDK+RAQE++NLRSNVD+AK LE+ KSEMS+ Y +E+SWKEMFSF++ETMETAVKSWHETSKVD RVYFLLDKEK+Q DKYAP VNIDKAF+SP THS+CF++LRQYAE+SFS+AACLVAPKS I+YPQVWKGQGSRKWK GQ+DG FVQFESP +RK+WFISSS E G+TLCR+P+ LDIGAHE+LPR+FKE
Sbjct:    2 MAESGKATNGGEA-EKSLKDKGNEFFKAGNFLKAAALYTQAIKLDPSNATLYSNRAAAFLSLVKLSKALADADTTIKLNPQWEKGYFRKGCVLEAMEKYEDALAAFEMALQHNPQSTEVSRKIKRLGQLQKDKQRAQELENLRSNVDMAKHLESFKSEMSDAYGTEESWKEMFSFIVETMETAVKSWHETSKVDTRVYFLLDKEKTQTDKYAPAVNIDKAFQSPDTHSNCFTYLRQYAEESFSKAACLVAPKSSISYPQVWKGQGSRKWKLGQNDGIFVQFESPAIRKVWFISSSKEKGQTLCREPQALDIGAHEILPRIFKE 323
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A072VSG1_MEDTR (RNA polymerase II-associated-like protein OS=Medicago truncatula GN=MTR_1g041435 PE=4 SV=1)

HSP 1 Score: 537.724 bits (1384), Expect = 0.000e+0
Identity = 252/314 (80.25%), Postives = 283/314 (90.13%), Query Frame = 2 
Query:  296 EGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            EG   E+SLKD+GNEFFK+G YLKAAALYTQAIK+DPSNPTL+SNRAAA L L KLNKAL DAE TI LKP+WEKG+FRKGCILEAM+RYDDALA+FQIA QYNPQS EV +KIK+++QL KD KRAQEV+N+RSNVD+AK L+TLK EMSEKY SE+SWK+MFSFL+ETMETAVKSWHETS VD RVYFL DKEK+Q DKY P+VNIDKAFESP THSSCF FLRQYAE+SFSRAACLVA K+II+YPQVWKGQGSRKWKH Q+DGFFVQFESP +RKLWFI SSNE G+ LCRDPE+LD+GAHEV+PRLFKE
Sbjct:    6 EGTSCEISLKDQGNEFFKSGKYLKAAALYTQAIKKDPSNPTLFSNRAAALLQLDKLNKALDDAEMTIKLKPEWEKGHFRKGCILEAMKRYDDALASFQIASQYNPQSQEVLKKIKKINQLVKDSKRAQEVENMRSNVDMAKHLDTLKPEMSEKYGSEESWKDMFSFLVETMETAVKSWHETSSVDARVYFLHDKEKTQTDKYPPIVNIDKAFESPETHSSCFPFLRQYAEESFSRAACLVAAKNIISYPQVWKGQGSRKWKHAQNDGFFVQFESPSVRKLWFIPSSNEKGQILCRDPEILDVGAHEVVPRLFKE 319
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: K4CVN1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc09g082540.2 PE=4 SV=1)

HSP 1 Score: 537.339 bits (1383), Expect = 0.000e+0
Identity = 250/318 (78.62%), Postives = 286/318 (89.94%), Query Frame = 2 
Query:  284 VGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            +G  + K  E SLKD+GNEFFKAGNYLKAAALYTQAIK+DPSN TLYSNRAAAFLHLVKL+KALADAE TI LKP+WEKGYFRKGCILEAMERY+DALAAF+IA +YNPQS+EVS+KIK L+QLAKDKKR +E++N+R+N+D+AK    LKSE+SEKY +ED WKE FSF +ET+E AVKSWHETSKVDPRVYFLL+KEK+  +KYAP VNIDKAFESPHTHS+CF+FLRQYAEDSF++AACLV PKSII+YPQVWKGQGSRKWKHGQ+DG FVQFESPL+RKLWFI SS E GKTLCRDP  LDI AHE+LPR+FK+
Sbjct:    1 MGESDAKA-ETSLKDQGNEFFKAGNYLKAAALYTQAIKKDPSNATLYSNRAAAFLHLVKLSKALADAEMTINLKPEWEKGYFRKGCILEAMERYEDALAAFRIASKYNPQSSEVSKKIKTLTQLAKDKKRTEELENMRTNIDMAKHFHALKSELSEKYGAEDGWKEFFSFHVETVEGAVKSWHETSKVDPRVYFLLNKEKTDTEKYAPAVNIDKAFESPHTHSNCFAFLRQYAEDSFAQAACLVTPKSIISYPQVWKGQGSRKWKHGQNDGIFVQFESPLVRKLWFIPSSTEKGKTLCRDPVALDISAHEILPRVFKQ 317
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: HSOP3_ARATH (Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana GN=HOP3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.778e-17
Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 2 
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            ++KGN FFK   Y +A   Y++AIK++P++   YSNRAA +  L  L + L DAE  I L P + KGY RKG I   M+ YD A+  +Q  L+++P++ E    ++R
Sbjct:  373 REKGNGFFKEQKYPEAVKHYSEAIKRNPNDVRAYSNRAACYTKLGALPEGLKDAEKCIELDPSFTKGYSRKGAIQFFMKEYDKAMETYQEGLKHDPKNQEFLDGVRR 479

HSP 2 Score: 85.1149 bits (209), Expect = 3.942e-16
Identity = 39/96 (40.62%), Postives = 61/96 (63.54%), Query Frame = 2 
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNP 610
            K KGN  F +G+Y  A   +T+AI   P+N  LYSNR+A++  L +  +AL+DA+ TI LKP W KGY R G     + ++D+A+ +++  L+ +P
Sbjct:    6 KSKGNAAFSSGDYATAITHFTEAINLSPTNHILYSNRSASYASLHRYEEALSDAKKTIELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDP 101
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: HSOP_WHEAT (Hsp70-Hsp90 organizing protein OS=Triticum aestivum GN=HOP PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.459e-16
Identity = 42/107 (39.25%), Postives = 65/107 (60.75%), Query Frame = 2 
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            ++KGNE FK   Y +A   Y +AI+++P +  +YSNRAA +  L  + + L DAE  I L P + KGY RKG +   M+ Y+ A+  +Q  L+Y+P + E+   I+R
Sbjct:  396 REKGNEMFKQQKYPEAIKHYNEAIRRNPKDARVYSNRAACYTKLGAMPEGLKDAEKCIELDPTFTKGYTRKGAVQFFMKEYEKAMETYQAGLKYDPNNQELLDGIRR 502

HSP 2 Score: 72.0182 bits (175), Expect = 6.585e-12
Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 2 
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGC 541
            K KGN  F AG + +AA  ++ AI   P+N  LYSNR+AA   + + + ALADAE T+ LKP W KGY R G 
Sbjct:    6 KAKGNAAFSAGRFEEAAGHFSDAIALAPANHVLYSNRSAALASIHRYSDALADAEKTVELKPDWAKGYSRLGA 78
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: SGTB_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus norvegicus GN=Sgtb PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.316e-15
Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 2 
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQS 616
            LKD+GN   K  NY  A   YTQAI+ DP+N   Y NRAAA   L     A+ D E  I +  ++ K Y R G  L AM ++++A+ ++Q AL  +P++
Sbjct:   88 LKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPEN 186
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: SGTB_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus GN=Sgtb PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.347e-15
Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 2 
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQS 616
            LKD+GN   K  NY  A   YTQAI+ DP+N   Y NRAAA   L     A+ D E  I +  ++ K Y R G  L AM ++++A+ ++Q AL  +P++
Sbjct:   88 LKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPEN 186
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: DNJC7_DICDI (DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.566e-15
Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = 2 
Query:  317 SLKDKGNEFFKAGNYLKAAALYTQAIKQDPS----NPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIK 640
            S K +GNE+F++ NY  A   +T+A+  DP     N  LYSNRAAA +HL ++++A+ D  + +T+ P + K Y R+       E Y+DA+  ++ A   +P++ E+ R IK
Sbjct:  237 SKKKEGNEYFQSKNYQAAYDSFTEALSIDPKLETMNSQLYSNRAAALVHLNRISEAINDCTSAVTIDPNYGKAYIRRAQCQMKQENYEDAVRDYEKAQSLDPENGELQRNIK 348
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_DICDI (Protein STIP1 homolog OS=Dictyostelium discoideum GN=sti1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.536e-15
Identity = 48/133 (36.09%), Postives = 77/133 (57.89%), Query Frame = 2 
Query:  308 QEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQY---NPQSAEVSRK----IKRLSQLAKDKKRAQEV 685
            Q +  K+KG E FK G + +A   + +AI+++P + T+YSNR+AA+  L++   A+ DA+  I L+P + KGY RKG  L AM  Y  AL  +   L+    NP+  ++SRK    + +L     D++R Q+ 
Sbjct:  378 QSIIEKNKGVEHFKKGEFPEAIKCFEEAIRRNPKDHTIYSNRSAAYSKLLEYKLAIKDADKCIELEPTFIKGYIRKGTALFAMREYQQALEVYDQGLRIEANNPELLDLSRKTVAALTKLQSTLTDEERLQQA 510

HSP 2 Score: 77.7962 bits (190), Expect = 1.014e-13
Identity = 40/102 (39.22%), Postives = 61/102 (59.80%), Query Frame = 2 
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEV 625
             K++GN  F + +Y  A   + QAI+ DPSN  LYSNR+A+ L L K   AL DA+  I LKP W KGY R+   L  + R+++A  + +  L+ +P + ++
Sbjct:   11 FKNQGNAAFSSKDYNSAVKCFDQAIELDPSNHILYSNRSASLLALDKNEDALTDAKKAIELKPDWSKGYLRETNALYKLGRFEEAEKSAEAGLKIDPTNQQL 112
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: TTC28_HUMAN (Tetratricopeptide repeat protein 28 OS=Homo sapiens GN=TTC28 PE=1 SV=4)

HSP 1 Score: 82.0333 bits (201), Expect = 8.914e-15
Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = 2 
Query:  329 KGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEV 625
            + N+    G++  A  LY +A+  DP N  LYSNR+AA++ + + +KAL DA     L P+W K YFR+G  L+ + R+ DALAAF   L  +P+S ++
Sbjct:   64 QSNQACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQL 162
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: SGTB_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens GN=SGTB PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.396e-14
Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 2 
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIK 640
            LKD+GN   K  NY  A   YTQAI+ DP+N   Y NRAAA   L     A+ D E  I +  ++ K Y R G  L A+ ++++A+ ++Q AL  +P++      +K
Sbjct:   88 LKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKALDLDPENDSYKSNLK 194
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: TTC28_MOUSE (Tetratricopeptide repeat protein 28 OS=Mus musculus GN=Ttc28 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 2.418e-14
Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 2 
Query:  329 KGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEV 625
            + N+    G++  A  LY +A+  DP N  LYSNR+AA++   + +KAL DA     L P+W K YFR+G  L+ + R+ DALAAF   L  +P+S ++
Sbjct:   58 QSNQACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKTQQYHKALDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQL 156
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: RPAP3_MOUSE (RNA polymerase II-associated protein 3 OS=Mus musculus GN=Rpap3 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.006e-14
Identity = 38/113 (33.63%), Postives = 66/113 (58.41%), Query Frame = 2 
Query:  314 MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652
            + LK+KGN++FK G Y +A   YT+ +  DP NP L +NRA+A+  L K   A +D    I L   + K Y R+G    A+++ +DA   ++  L+  P + E + ++++++Q
Sbjct:  135 LVLKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAIALSRTYTKAYARRGAARFALQKLEDARKDYEKVLELEPDNFEATNELRKINQ 247

HSP 2 Score: 65.4698 bits (158), Expect = 8.594e-10
Identity = 35/121 (28.93%), Postives = 62/121 (51.24%), Query Frame = 2 
Query:  284 VGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRL 646
             G  +G+ + ++ KD GN FFK G Y +A   YT+ I  D +N  L +NRA A+L + +  +A  D    I L   + K + R+G     + + ++A   F+  L   P + + + ++ R+
Sbjct:  275 TGGQQGRQKAIAEKDLGNGFFKEGKYEQAIECYTRGIAADRTNALLPANRAMAYLKIQRYEEAERDCTQAIVLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAATELSRI 395
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
D7T726_VITVI0.000e+080.25Putative uncharacterized protein OS=Vitis vinifera... [more]
M5Y4T5_PRUPE0.000e+080.43Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
A0A0A0LNU0_CUCSA0.000e+079.45Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
A0A0B2PR45_GLYSO0.000e+082.58Heat shock protein STI OS=Glycine soja GN=glysoja_... [more]
A0A068TUS5_COFCA0.000e+081.13Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
A0A0B2NXV1_GLYSO0.000e+080.50Heat shock protein STI OS=Glycine soja GN=glysoja_... [more]
C6TJ63_SOYBN0.000e+080.50Uncharacterized protein OS=Glycine max PE=2 SV=1[more]
R0IMB9_9BRAS0.000e+078.64Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
A0A072VSG1_MEDTR0.000e+080.25RNA polymerase II-associated-like protein OS=Medic... [more]
K4CVN1_SOLLC0.000e+078.62Uncharacterized protein OS=Solanum lycopersicum GN... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
HSOP3_ARATH5.778e-1741.12Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis th... [more]
HSOP_WHEAT1.459e-1639.25Hsp70-Hsp90 organizing protein OS=Triticum aestivu... [more]
SGTB_RAT3.316e-1540.40Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGTB_MOUSE3.347e-1540.40Small glutamine-rich tetratricopeptide repeat-cont... [more]
DNJC7_DICDI3.566e-1536.61DnaJ homolog subfamily C member 7 homolog OS=Dicty... [more]
STIP1_DICDI5.536e-1536.09Protein STIP1 homolog OS=Dictyostelium discoideum ... [more]
TTC28_HUMAN8.914e-1540.40Tetratricopeptide repeat protein 28 OS=Homo sapien... [more]
SGTB_HUMAN1.396e-1437.38Small glutamine-rich tetratricopeptide repeat-cont... [more]
TTC28_MOUSE2.418e-1440.40Tetratricopeptide repeat protein 28 OS=Mus musculu... [more]
RPAP3_MOUSE4.006e-1433.63RNA polymerase II-associated protein 3 OS=Mus musc... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 49..82
e-value: 8.1
score: 15.4
coord: 83..116
e-value: 6.8E-5
score: 32.3
coord: 15..48
e-value: 0.0071
score: 25.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 15..48
score: 9.352
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 49..82
score: 6.018
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 83..116
score: 9.765
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 16..144
e-value: 1.2E-33
score: 115.4
IPR011990Tetratricopeptide-like helical domainPFAMPF13414TPR_11coord: 22..60
e-value: 1.4E-9
score: 37.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 17..126
IPR013105Tetratricopeptide repeat 2PFAMPF07719TPR_2coord: 84..115
e-value: 8.6E-6
score: 25.4
NoneNo IPR availablePANTHERPTHR22904:SF289CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN-RELATEDcoord: 13..193
NoneNo IPR availablePANTHERPTHR22904:SF289CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN-RELATEDcoord: 252..311
NoneNo IPR availablePANTHERPTHR22904TPR REPEAT CONTAINING PROTEINcoord: 252..311
coord: 13..193
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 15..116
score: 21.994

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0001270 ID=g.arboreum_cottongen_reftransV1_0001270; Name=g.arboreum_cottongen_reftransV1_0001270; organism=Gossypium arboreum; type=contig; length=1709bp
GTTTAGTTTACCCATAATTTTTTTAAGGAAAAAACCAGAGCTCACTCTTG
TAATTTTGCTTAGGGTTTTCTTTTAATCAAAACTAATCTGATTCTCCTTT
CTACTCCAAAATCACCAAAAGCCCAGATTTTGTTTAGAAATTAGAAAACT
CCATCGTTTATACCGCTGTTAAATACCTCCATAGACATCATCCCCTCAGA
AAAGTAGAAGCTTCTCTCTCCCATTAACCCTAACTACACAACAAATAAAA
TTACTTCAAAACAATAGGATGGCAGAAGCAGAGGTAGGATCTGGTGAAGG
AAAGCCCCAAGAGATGTCGTTGAAGGATAAAGGGAATGAGTTTTTCAAGG
CTGGGAACTACCTTAAAGCTGCTGCTCTTTACACTCAGGCCATTAAACAA
GACCCTTCAAATCCCACTCTTTATAGCAATCGAGCAGCAGCGTTTCTACA
TTTGGTTAAACTTAACAAAGCGCTGGCTGATGCTGAGACAACAATTACTT
TGAAACCTCAGTGGGAAAAGGGATATTTTCGAAAAGGATGCATTTTAGAG
GCTATGGAACGATATGACGATGCTTTAGCTGCCTTCCAAATAGCTTTGCA
GTACAACCCACAAAGTGCAGAAGTCTCAAGAAAAATTAAGAGACTTTCAC
AGCTTGCAAAAGATAAAAAGCGAGCTCAAGAAGTGCAAAACTTGCGATCC
AATGTAGATATAGCAAAAAGCTTGGAAACATTGAAATCTGAAATGTCTGA
AAAGTACAAATCGGAAGATAGTTGGAAAGAGATGTTTTCTTTTCTTATTG
AGACAATGGAAACAGCTGTAAAATCATGGCATGAGACTTCCAAAGTGGAT
CCTAGAGTCTACTTCCTTCTTGATAAGGAGAAGAGCCAAGCCGATAAATA
TGCTCCAGTTGTCAATATTGACAAGGCTTTTGAATCGCCTCATACGCACA
GCAGTTGTTTTTCATTTCTTAGGCAATATGCTGAAGATTCTTTCTCTAGA
GCAGCTTGTTTAGTTGCTCCTAAAAGTATCATAGCTTATCCACAGGTCTG
GAAAGGTCAGGGTTCAAGGAAGTGGAAGCATGGGCAACATGATGGTTTCT
TTGTTCAATTCGAGTCACCACTCTTGCGAAAACTATGGTTTATTTCGAGT
TCCAATGAGATGGGGAAGACACTGTGCAGGGATCCAGAGGTTCTAGATAT
AGGTGCACATGAAGTACTTCCACGCCTTTTCAAAGAAAATCTATCCAGTT
CCTCATGAGCTTTATCTTAGGCTGAAGGAAATTGCTAGGCATGCCGGTGG
ACTTTGATTGCGAGGTTTACATATGAAAAAAGGTACCAACAACATAGCGT
GCTTGCTTGTTACTTCGAGCTGTATATGAATTTCCTTTTATATGTGAAAA
CTCGCCAACTAGGTACACTTTTTCGAGTCACATAGCACTCATTTTCTTGG
TTTTGAAAAATTTTCTAAAGAAGTTTACAAGCCTTTTTTGAGTGATTACA
TTTTATGGGTGTTTGTTAAAACTGCTTTCTTGCCTTAAGTGATTCGCGGG
TTTCGGTTCTTGAGTTGGTTATATGTTGGAAGAACAGTAAAGCTAGTTGG
TGTAGAACTTATTCTCTTGTTTTCTGTTGTAATTATATGTAGAAAGTTAT
CGATAAGGGCTGATGTAGTTTTGTTTCATTTATGCATGAAGGGTTTCTTT
CTTTTAAAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013105TPR_2
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding