g.arboreum_cottongen_reftransV1_0001270, g.arboreum_cottongen_reftransV1_0001270 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0001270
Unique Name	g.arboreum_cottongen_reftransV1_0001270
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	1709

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr7	chromosome	g.arboreum_cottongen_reftransV1_0001270:1..1707 . Chr7:37337523..37341663 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: D7T726_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03920 PE=4 SV=1)

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 260/324 (80.25%), Postives = 292/324 (90.12%), Query Frame = 2

Query:  269 MAEAE-VGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            M EA+  G    + +++SLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKL KALADAETTITL P WEKGYFRKGC+LEAMERYDD+L AF+IAL++NPQS+EVSRKIK+L+QLA+DKKR QEV+N RSNVD+AK LETLKSE+SEKY   + WK MFSF +ET+ETA+KSWHETSKVD RVYFLLDKEK+Q DKYAPVVNIDKAFESPHTH SCF+FLR YAE+SFS+AACLVAPKSII+YPQVWKGQGSRKWKHGQ DGFFVQFESP L+KLWF+ SS E G+ LCRDPEVLDIG HE+LPR+FK+
Sbjct:    1 MEEADGKGRAASESEQVSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLTKALADAETTITLNPNWEKGYFRKGCVLEAMERYDDSLVAFRIALEHNPQSSEVSRKIKKLTQLARDKKRVQEVENKRSNVDMAKHLETLKSELSEKYGDAEHWKSMFSFTVETIETAIKSWHETSKVDARVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHKSCFTFLRDYAEESFSKAACLVAPKSIISYPQVWKGQGSRKWKHGQSDGFFVQFESPSLQKLWFVPSSTEKGQLLCRDPEVLDIGVHELLPRIFKQ 324

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: M5Y4T5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008502mg PE=4 SV=1)

HSP 1 Score: 551.977 bits (1421), Expect = 0.000e+0
Identity = 263/327 (80.43%), Postives = 292/327 (89.30%), Query Frame = 2

Query:  269 MAEA----EVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEA    + G+  G   E SLKDKGNE FKAGNYLKAAALYTQAIKQDP+NPTLYSNRAAAFL LVKL+KALADAETTI L PQWEKGYFRKGCILEAME+YDDALAAFQ ALQYN QS EVSRKIKR+SQLA+DKKRAQEV+ +RSNVD+A+ L+ LKSEMS K  SE+ W++MFSFL+ETMETA+KSWHETSKV+ RVYFLLDKEK+  +KYAP VNIDKAFESPHTH SCFSFLRQYAEDSFSRAACLV PKSI++YPQVWKGQGSRKWKHGQHDGFFVQFE+P LRKLWFI SS+E+G+ LCRDPE LDIGAHE++PRLFK+
Sbjct:    1 MAEAGGSDKAGASAGGGVE-SLKDKGNEHFKAGNYLKAAALYTQAIKQDPNNPTLYSNRAAAFLQLVKLSKALADAETTIKLNPQWEKGYFRKGCILEAMEQYDDALAAFQTALQYNSQSTEVSRKIKRISQLARDKKRAQEVEKMRSNVDMARQLDKLKSEMSGKRGSEECWEDMFSFLVETMETAIKSWHETSKVEARVYFLLDKEKTDTEKYAPAVNIDKAFESPHTHGSCFSFLRQYAEDSFSRAACLVTPKSIMSYPQVWKGQGSRKWKHGQHDGFFVQFETPFLRKLWFIPSSSELGQILCRDPEDLDIGAHELIPRLFKQ 326

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0A0LNU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G223130 PE=4 SV=1)

HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0
Identity = 259/326 (79.45%), Postives = 286/326 (87.73%), Query Frame = 2

Query:  269 MAEAEVGSGEGKP---QEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEAE GS  G      E SLKDKGNEFFKAGNYLKAAALYTQAIK DPSN  LYSNRAAAFLHLVKLNKALADAE TI L PQWEKGYFRKGCILEAME+YDDAL+AFQ ALQYNPQSAEVSRKIKR+SQL KDKKRAQEV+  RSN+D+ K L+ LKSE+SEKY SE+ WK++FSFL+ETME AV+SWHETS VD +VY+LLD EK+  +KYAPVVNIDKAFESPHTHS CF FLR+YAEDS SRAACLV PKS+I+YPQVWKGQGSRKWKHGQHDGFFVQ E+P LRKLWF+ SS+E+G+ LCRDPEVLDI AHE+LPR+FKE
Sbjct:    1 MAEAETGSATGNSGGVPEPSLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNHALYSNRAAAFLHLVKLNKALADAEMTIKLSPQWEKGYFRKGCILEAMEKYDDALSAFQTALQYNPQSAEVSRKIKRVSQLVKDKKRAQEVEKKRSNIDMTKHLDKLKSELSEKYGSEECWKDIFSFLVETMEAAVRSWHETSNVDAKVYYLLDNEKTDTEKYAPVVNIDKAFESPHTHSDCFQFLRKYAEDSVSRAACLVTPKSLISYPQVWKGQGSRKWKHGQHDGFFVQLETPSLRKLWFVPSSSELGRPLCRDPEVLDIAAHELLPRIFKE 326

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0B2PR45_GLYSO (Heat shock protein STI OS=Glycine soja GN=glysoja_034314 PE=4 SV=1)

HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0
Identity = 256/310 (82.58%), Postives = 281/310 (90.65%), Query Frame = 2

Query:  311 EMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKEN 1240
            EMSLKD+GNEFFK+G YLKAAALYTQAIKQDPSNPTLYSNRAAA L L KLNKAL DAE TI LKPQWEKGYFRKG ILEAM+RYDDALAAFQIALQYNPQS EV++KIK+++QL KD KRAQEV+N+RSNVD+AK L+T K+EMS KY  E+ WK++FSFL+ETMETAVKSWH+TS VD RVYFLLDKEK+  DKYAPVVNIDKAFESPHTH +CF+FLRQYAE+SFS+AACLV PK+IIAYPQVWKGQG RKWKH Q DGFFVQFESP LRKLWFI SSNE G+TLCRDPEVLDIGAHEVLPRLFKEN
Sbjct:   12 EMSLKDQGNEFFKSGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALAAFQIALQYNPQSQEVTKKIKKINQLMKDSKRAQEVENMRSNVDMAKHLDTFKTEMSGKYGLEEGWKDLFSFLVETMETAVKSWHKTSSVDARVYFLLDKEKTDTDKYAPVVNIDKAFESPHTHGNCFAFLRQYAEESFSKAACLVTPKNIIAYPQVWKGQGPRKWKHAQSDGFFVQFESPSLRKLWFIPSSNEKGQTLCRDPEVLDIGAHEVLPRLFKEN 321

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A068TUS5_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_3 OS=Coffea canephora GN=GSCOC_T00026126001 PE=4 SV=1)

HSP 1 Score: 545.043 bits (1403), Expect = 0.000e+0
Identity = 258/318 (81.13%), Postives = 287/318 (90.25%), Query Frame = 2

Query:  284 VGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            +G  E K  E SLKD+GNEFFK+GNYLKAAALYTQAIKQDP+N TLYSNRAAAFLHLVKLNKALADAETTITLKP WEKGYFRKGC+LEAMERYDDAL+AF++AL+YNPQS+EVSRKIKRLSQL K+KKRAQEV+++RSNVD+AK L+ LKSE+S KY +E+   E+FSFL+ETME AVKSWHE+SKVD RVYFLLDK+K+   KYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLV PKSII+YPQVWKGQGSRKWKHGQ DGFFVQFE+P +RKLWF+ SS E G+TLCRDP  LDI  HEVLPRLFKE
Sbjct:    1 MGESEAK-MEQSLKDQGNEFFKSGNYLKAAALYTQAIKQDPNNATLYSNRAAAFLHLVKLNKALADAETTITLKPDWEKGYFRKGCVLEAMERYDDALSAFEMALKYNPQSSEVSRKIKRLSQLEKEKKRAQEVESMRSNVDMAKHLDALKSELSGKYGAEEISGEIFSFLVETMEMAVKSWHESSKVDARVYFLLDKDKTDTQKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVTPKSIISYPQVWKGQGSRKWKHGQTDGFFVQFETPSIRKLWFLPSSTEKGQTLCRDPVALDISVHEVLPRLFKE 317

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0B2NXV1_GLYSO (Heat shock protein STI OS=Glycine soja GN=glysoja_022876 PE=4 SV=1)

HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0
Identity = 260/323 (80.50%), Postives = 286/323 (88.54%), Query Frame = 2

Query:  269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAE + GSG     EMSLKD+GNEFFK+G YLKAAALYTQAIK DPSNPTLYSNRAAA L L KLNKAL DAE TI LKPQWEKGYFRKG ILEAM+RYDDALA+FQIALQYNPQS EVS+KIK+++QL KD KRAQEV+N+RSNVD+AK L+T K+EMS KY SE+  K++FSFL+ETMETAVKSWHETS VD +VYFLLDKEK+  DKYAPVVNIDKAFESPHTH +CF+FLRQYAE+SFS+AACLV PK+IIAYPQVWKGQGSRKWKH Q DGFFVQFESP LRKLWFI SSNE G+T CRDPEVLDIGAHEVLPRLFKE
Sbjct:    1 MAETKEGSG----SEMSLKDQGNEFFKSGKYLKAAALYTQAIKLDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALASFQIALQYNPQSQEVSKKIKKINQLVKDSKRAQEVENMRSNVDMAKHLDTFKTEMSGKYGSEECLKDLFSFLVETMETAVKSWHETSSVDAKVYFLLDKEKTDTDKYAPVVNIDKAFESPHTHGNCFAFLRQYAEESFSKAACLVTPKNIIAYPQVWKGQGSRKWKHAQSDGFFVQFESPSLRKLWFIPSSNEKGQTWCRDPEVLDIGAHEVLPRLFKE 319

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: C6TJ63_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0
Identity = 260/323 (80.50%), Postives = 286/323 (88.54%), Query Frame = 2

Query:  269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAE + GSG     EMSLKD+GNEFFK+G YLKAAALYTQAIK DPSNPTLYSNRAAA L L KLNKAL DAE TI LKPQWEKGYFRKG ILEAM+RYDDALA+FQIALQYNPQS EVS+KIK+++QL KD KRAQEV+N+RSNVD+AK L+T K+EMS KY SE+  K++FSFL+ETMETAVKSWHETS VD +VYFLLDKEK+  DKYAPVVNIDKAFESPHTH +CF+FLRQYAE+SFS+AACLV PK+IIAYPQVWKGQGSRKWKH Q DGFFVQFESP LRKLWFI SSNE G+T CRDPEVLDIGAHEVLPRLFKE
Sbjct:    1 MAETKEGSG----SEMSLKDQGNEFFKSGKYLKAAALYTQAIKLDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALASFQIALQYNPQSQEVSKKIKKINQLVKDSKRAQEVENMRSNVDMAKHLDTFKTEMSGKYGSEECLKDLFSFLVETMETAVKSWHETSSVDAKVYFLLDKEKTDTDKYAPVVNIDKAFESPHTHGNCFAFLRQYAEESFSKAACLVTPKNIIAYPQVWKGQGSRKWKHAQSDGFFVQFESPSLRKLWFIPSSNEKGQTWCRDPEVLDIGAHEVLPRLFKE 319

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: R0IMB9_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10009715mg PE=4 SV=1)

HSP 1 Score: 542.347 bits (1396), Expect = 0.000e+0
Identity = 254/323 (78.64%), Postives = 292/323 (90.40%), Query Frame = 2

Query:  269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAE+   +  G+  E SLKDKGNEFFKAGN+LKAAALYTQAIK DPSN TLYSNRAAAFL LVKL+KALADA+TTI L PQWEKGYFRKGC+LEAME+Y+DALAAF++ALQ+NPQS EVSRKIKRL QL KDK+RAQE++NLRSNVD+AK LE+ KSEMS+ Y +E+SWKEMFSF++ETMETAVKSWHETSKVD RVYFLLDKEK+Q DKYAP VNIDKAF+SP THS+CF++LRQYAE+SFS+AACLVAPKS I+YPQVWKGQGSRKWK GQ+DG FVQFESP +RK+WFISSS E G+TLCR+P+ LDIGAHE+LPR+FKE
Sbjct:    2 MAESGKATNGGEA-EKSLKDKGNEFFKAGNFLKAAALYTQAIKLDPSNATLYSNRAAAFLSLVKLSKALADADTTIKLNPQWEKGYFRKGCVLEAMEKYEDALAAFEMALQHNPQSTEVSRKIKRLGQLQKDKQRAQELENLRSNVDMAKHLESFKSEMSDAYGTEESWKEMFSFIVETMETAVKSWHETSKVDTRVYFLLDKEKTQTDKYAPAVNIDKAFQSPDTHSNCFTYLRQYAEESFSKAACLVAPKSSISYPQVWKGQGSRKWKLGQNDGIFVQFESPAIRKVWFISSSKEKGQTLCREPQALDIGAHEILPRIFKE 323

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A072VSG1_MEDTR (RNA polymerase II-associated-like protein OS=Medicago truncatula GN=MTR_1g041435 PE=4 SV=1)

HSP 1 Score: 537.724 bits (1384), Expect = 0.000e+0
Identity = 252/314 (80.25%), Postives = 283/314 (90.13%), Query Frame = 2

Query:  296 EGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            EG   E+SLKD+GNEFFK+G YLKAAALYTQAIK+DPSNPTL+SNRAAA L L KLNKAL DAE TI LKP+WEKG+FRKGCILEAM+RYDDALA+FQIA QYNPQS EV +KIK+++QL KD KRAQEV+N+RSNVD+AK L+TLK EMSEKY SE+SWK+MFSFL+ETMETAVKSWHETS VD RVYFL DKEK+Q DKY P+VNIDKAFESP THSSCF FLRQYAE+SFSRAACLVA K+II+YPQVWKGQGSRKWKH Q+DGFFVQFESP +RKLWFI SSNE G+ LCRDPE+LD+GAHEV+PRLFKE
Sbjct:    6 EGTSCEISLKDQGNEFFKSGKYLKAAALYTQAIKKDPSNPTLFSNRAAALLQLDKLNKALDDAEMTIKLKPEWEKGHFRKGCILEAMKRYDDALASFQIASQYNPQSQEVLKKIKKINQLVKDSKRAQEVENMRSNVDMAKHLDTLKPEMSEKYGSEESWKDMFSFLVETMETAVKSWHETSSVDARVYFLHDKEKTQTDKYPPIVNIDKAFESPETHSSCFPFLRQYAEESFSRAACLVAAKNIISYPQVWKGQGSRKWKHAQNDGFFVQFESPSVRKLWFIPSSNEKGQILCRDPEILDVGAHEVVPRLFKE 319

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: K4CVN1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc09g082540.2 PE=4 SV=1)

HSP 1 Score: 537.339 bits (1383), Expect = 0.000e+0
Identity = 250/318 (78.62%), Postives = 286/318 (89.94%), Query Frame = 2

Query:  284 VGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            +G  + K  E SLKD+GNEFFKAGNYLKAAALYTQAIK+DPSN TLYSNRAAAFLHLVKL+KALADAE TI LKP+WEKGYFRKGCILEAMERY+DALAAF+IA +YNPQS+EVS+KIK L+QLAKDKKR +E++N+R+N+D+AK    LKSE+SEKY +ED WKE FSF +ET+E AVKSWHETSKVDPRVYFLL+KEK+  +KYAP VNIDKAFESPHTHS+CF+FLRQYAEDSF++AACLV PKSII+YPQVWKGQGSRKWKHGQ+DG FVQFESPL+RKLWFI SS E GKTLCRDP  LDI AHE+LPR+FK+
Sbjct:    1 MGESDAKA-ETSLKDQGNEFFKAGNYLKAAALYTQAIKKDPSNATLYSNRAAAFLHLVKLSKALADAEMTINLKPEWEKGYFRKGCILEAMERYEDALAAFRIASKYNPQSSEVSKKIKTLTQLAKDKKRTEELENMRTNIDMAKHFHALKSELSEKYGAEDGWKEFFSFHVETVEGAVKSWHETSKVDPRVYFLLNKEKTDTEKYAPAVNIDKAFESPHTHSNCFAFLRQYAEDSFAQAACLVTPKSIISYPQVWKGQGSRKWKHGQNDGIFVQFESPLVRKLWFIPSSTEKGKTLCRDPVALDISAHEILPRVFKQ 317

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: HSOP2_ARATH (Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis thaliana GN=HOP2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.651e-19
Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652
            ++KGN+FFK   Y  A   YT+AIK++P +P  YSNRAA +  L  + + L DAE  I L P + KGY RKG +   M+ YD+A+  +Q  L+++P + E+   +KR  Q
Sbjct:  386 REKGNDFFKEQKYPDAVRHYTEAIKRNPKDPRAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFLKGYSRKGAVQFFMKEYDNAMETYQKGLEHDPNNQELLDGVKRCVQ 495

HSP 2 Score: 77.0258 bits (188), Expect = 1.737e-13
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNP 610
            K KGN  F +G++  A   +T AI   P+N  L+SNR+AA   L   ++AL+DA+ T+ LKP W KGY R G     + ++D+A+ A+   L+ +P
Sbjct:    6 KAKGNAAFSSGDFNSAVNHFTDAINLTPTNHVLFSNRSAAHASLNHYDEALSDAKKTVELKPDWGKGYSRLGAAHLGLNQFDEAVEAYSKGLEIDP 101

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_CAEEL (Stress-induced-phosphoprotein 1 OS=Caenorhabditis elegans GN=sti-1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.215e-19
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIK 640
            K+KGNE+FK G+Y  A   Y +A+K+DP N  LYSNRAA    L++  +AL D +T I L  ++ KGY RK   L AM  +  A  A++ ALQ +P + E    ++
Sbjct:  144 KNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVR 249

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_CRIGR (Stress-induced-phosphoprotein 1 OS=Cricetulus griseus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.124e-17
Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL+ +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALELDSSCKEAADGYQR 470

HSP 2 Score: 79.7221 bits (195), Expect = 1.887e-14
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2

Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRL 646
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   + ++   ++ +
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNLQLKEGLQNM 115

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: HSOP1_SOYBN (Hsp70-Hsp90 organizing protein 1 OS=Glycine max GN=HOP1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.437e-17
Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            ++KGNE FK   Y +A   YT+AIK++P +   YSNRAA +  L  + + L DAE  I L P + KGY RKG +  +M+ YD AL  ++  L+++P + E+   I+R
Sbjct:  387 REKGNELFKQQKYPEATKHYTEAIKRNPKDAKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFSKGYTRKGAVQFSMKEYDKALETYREGLKHDPNNQELLDGIRR 493

HSP 2 Score: 83.1889 bits (204), Expect = 1.680e-15
Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSA 619
            K KGN  F AG++  A   ++ AI   PSN  LYSNR+AA   L    +ALADA+ T+ LKP W K Y R G     + R+ DA +A++  LQ +P +A
Sbjct:    6 KAKGNAAFSAGDFAAAVRHFSDAIALSPSNHVLYSNRSAAHASLQNYAEALADAQKTVDLKPDWPKAYSRLGAAHLGLRRHRDAFSAYKTGLQLDPDNA 104

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: HSOP1_ARATH (Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis thaliana GN=HOP1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.115e-17
Identity = 43/110 (39.09%), Postives = 69/110 (62.73%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652
            ++KGN+FFK   Y +A   YT+AIK++P++   YSNRAA++  L  + + L DAE  I L P + KGY RK  +   ++ YD+A+  +Q  L+++P + E+   +KR  Q
Sbjct:  387 REKGNDFFKEQKYPEAIKHYTEAIKRNPNDHKAYSNRAASYTKLGAMPEGLKDAEKCIELDPTFSKGYSRKAAVQFFLKEYDNAMETYQAGLEHDPSNQELLDGVKRCVQ 496

HSP 2 Score: 73.1738 bits (178), Expect = 2.856e-12
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNP 610
            K KGN  F +G++  A   +T+AI   P+N  L+SNR+AA   L +  +AL+DA+ TI LKP W KGY R G     + +++ A+ A++  L  +P
Sbjct:    6 KAKGNAAFSSGDFTTAINHFTEAIALAPTNHVLFSNRSAAHASLHQYAEALSDAKETIKLKPYWPKGYSRLGAAHLGLNQFELAVTAYKKGLDVDP 101

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_BOVIN (Stress-induced-phosphoprotein 1 OS=Bos taurus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.153e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSNCKEAADGYQR 470

HSP 2 Score: 81.6481 bits (200), Expect = 4.806e-15
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 2

Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQY---NPQSAE 622
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   NPQ  E
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKQTYEEGLKHEANNPQLKE 110

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_HUMAN (Stress-induced-phosphoprotein 1 OS=Homo sapiens GN=STIP1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.927e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 470

HSP 2 Score: 79.7221 bits (195), Expect = 1.971e-14
Identity = 44/104 (42.31%), Postives = 59/104 (56.73%), Query Frame = 2

Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQY---NPQSAE 622
            LK+KGN+    GN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   NPQ  E
Sbjct:    7 LKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKE 110

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_RAT (Stress-induced-phosphoprotein 1 OS=Rattus norvegicus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.996e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 470

HSP 2 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2

Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRL 646
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   + ++   ++ +
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNLQLKEGLQNM 115

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_MOUSE (Stress-induced-phosphoprotein 1 OS=Mus musculus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.558e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 470

HSP 2 Score: 79.7221 bits (195), Expect = 2.096e-14
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2

Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRL 646
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   + ++   ++ +
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPQNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNLQLKEGLQNM 115

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STIP1_MACFA (Stress-induced-phosphoprotein 1 OS=Macaca fascicularis GN=STIP1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.558e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2

Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR 643
            K+KGNE F+ G+Y +A   YT+AIK++P +  LYSNRAA +  L++   AL D E  I L+P + KGY RK   LEAM+ Y  A+  +Q AL  +    E +   +R
Sbjct:  364 KNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSRKEAADGYQR 470

HSP 2 Score: 81.2629 bits (199), Expect = 6.307e-15
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 2

Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQY---NPQSAE 622
            LK+KGN+   AGN   A   Y++AIK DP N  LYSNR+AA+       KA  D   T+ LKP W KGY RK   LE + R+++A   ++  L++   NPQ  E
Sbjct:    7 LKEKGNKALSAGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVELKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKE 110

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
D7T726_VITVI	0.000e+0	80.25	Putative uncharacterized protein OS=Vitis vinifera...	[more]
M5Y4T5_PRUPE	0.000e+0	80.43	Uncharacterized protein OS=Prunus persica GN=PRUPE...	[more]
A0A0A0LNU0_CUCSA	0.000e+0	79.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_...	[more]
A0A0B2PR45_GLYSO	0.000e+0	82.58	Heat shock protein STI OS=Glycine soja GN=glysoja_...	[more]
A0A068TUS5_COFCA	0.000e+0	81.13	Coffea canephora DH200=94 genomic scaffold, scaffo...	[more]
A0A0B2NXV1_GLYSO	0.000e+0	80.50	Heat shock protein STI OS=Glycine soja GN=glysoja_...	[more]
C6TJ63_SOYBN	0.000e+0	80.50	Uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
R0IMB9_9BRAS	0.000e+0	78.64	Uncharacterized protein OS=Capsella rubella GN=CAR...	[more]
A0A072VSG1_MEDTR	0.000e+0	80.25	RNA polymerase II-associated-like protein OS=Medic...	[more]
K4CVN1_SOLLC	0.000e+0	78.62	Uncharacterized protein OS=Solanum lycopersicum GN...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
HSOP2_ARATH	4.651e-19	41.82	Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis th...	[more]
STIP1_CAEEL	5.215e-19	42.45	Stress-induced-phosphoprotein 1 OS=Caenorhabditis ...	[more]
STIP1_CRIGR	2.124e-17	42.99	Stress-induced-phosphoprotein 1 OS=Cricetulus gris...	[more]
HSOP1_SOYBN	2.437e-17	41.12	Hsp70-Hsp90 organizing protein 1 OS=Glycine max GN...	[more]
HSOP1_ARATH	3.115e-17	39.09	Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis th...	[more]
STIP1_BOVIN	3.153e-17	42.99	Stress-induced-phosphoprotein 1 OS=Bos taurus GN=S...	[more]
STIP1_HUMAN	3.927e-17	42.99	Stress-induced-phosphoprotein 1 OS=Homo sapiens GN...	[more]
STIP1_RAT	3.996e-17	42.99	Stress-induced-phosphoprotein 1 OS=Rattus norvegic...	[more]
STIP1_MOUSE	4.558e-17	42.99	Stress-induced-phosphoprotein 1 OS=Mus musculus GN...	[more]
STIP1_MACFA	4.558e-17	42.99	Stress-induced-phosphoprotein 1 OS=Macaca fascicul...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 49..82 e-value: 8.1 score: 15.4 coord: 83..116 e-value: 6.8E-5 score: 32.3 coord: 15..48 e-value: 0.0071 score: 25.6
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 15..48 score: 9.352
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 49..82 score: 6.018
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 83..116 score: 9.765
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 16..144 e-value: 1.2E-33 score: 115.4
IPR011990	Tetratricopeptide-like helical domain	PFAM	PF13414	TPR_11	coord: 22..60 e-value: 1.4E-9 score: 37.3
IPR011990	Tetratricopeptide-like helical domain	SUPERFAMILY	48452	TPR-like	coord: 17..126
IPR013105	Tetratricopeptide repeat 2	PFAM	PF07719	TPR_2	coord: 84..115 e-value: 8.6E-6 score: 25.4
None	No IPR available	PANTHER	PTHR22904:SF289	CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN-RELATED	coord: 13..193
None	No IPR available	PANTHER	PTHR22904:SF289	CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN-RELATED	coord: 252..311
None	No IPR available	PANTHER	PTHR22904	TPR REPEAT CONTAINING PROTEIN	coord: 252..311 coord: 13..193
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 15..116 score: 21.994

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0001270 ID=g.arboreum_cottongen_reftransV1_0001270; Name=g.arboreum_cottongen_reftransV1_0001270; organism=Gossypium arboreum; type=contig; length=1709bp
GTTTAGTTTACCCATAATTTTTTTAAGGAAAAAACCAGAGCTCACTCTTG
TAATTTTGCTTAGGGTTTTCTTTTAATCAAAACTAATCTGATTCTCCTTT
CTACTCCAAAATCACCAAAAGCCCAGATTTTGTTTAGAAATTAGAAAACT
CCATCGTTTATACCGCTGTTAAATACCTCCATAGACATCATCCCCTCAGA
AAAGTAGAAGCTTCTCTCTCCCATTAACCCTAACTACACAACAAATAAAA
TTACTTCAAAACAATAGGATGGCAGAAGCAGAGGTAGGATCTGGTGAAGG
AAAGCCCCAAGAGATGTCGTTGAAGGATAAAGGGAATGAGTTTTTCAAGG
CTGGGAACTACCTTAAAGCTGCTGCTCTTTACACTCAGGCCATTAAACAA
GACCCTTCAAATCCCACTCTTTATAGCAATCGAGCAGCAGCGTTTCTACA
TTTGGTTAAACTTAACAAAGCGCTGGCTGATGCTGAGACAACAATTACTT
TGAAACCTCAGTGGGAAAAGGGATATTTTCGAAAAGGATGCATTTTAGAG
GCTATGGAACGATATGACGATGCTTTAGCTGCCTTCCAAATAGCTTTGCA
GTACAACCCACAAAGTGCAGAAGTCTCAAGAAAAATTAAGAGACTTTCAC
AGCTTGCAAAAGATAAAAAGCGAGCTCAAGAAGTGCAAAACTTGCGATCC
AATGTAGATATAGCAAAAAGCTTGGAAACATTGAAATCTGAAATGTCTGA
AAAGTACAAATCGGAAGATAGTTGGAAAGAGATGTTTTCTTTTCTTATTG
AGACAATGGAAACAGCTGTAAAATCATGGCATGAGACTTCCAAAGTGGAT
CCTAGAGTCTACTTCCTTCTTGATAAGGAGAAGAGCCAAGCCGATAAATA
TGCTCCAGTTGTCAATATTGACAAGGCTTTTGAATCGCCTCATACGCACA
GCAGTTGTTTTTCATTTCTTAGGCAATATGCTGAAGATTCTTTCTCTAGA
GCAGCTTGTTTAGTTGCTCCTAAAAGTATCATAGCTTATCCACAGGTCTG
GAAAGGTCAGGGTTCAAGGAAGTGGAAGCATGGGCAACATGATGGTTTCT
TTGTTCAATTCGAGTCACCACTCTTGCGAAAACTATGGTTTATTTCGAGT
TCCAATGAGATGGGGAAGACACTGTGCAGGGATCCAGAGGTTCTAGATAT
AGGTGCACATGAAGTACTTCCACGCCTTTTCAAAGAAAATCTATCCAGTT
CCTCATGAGCTTTATCTTAGGCTGAAGGAAATTGCTAGGCATGCCGGTGG
ACTTTGATTGCGAGGTTTACATATGAAAAAAGGTACCAACAACATAGCGT
GCTTGCTTGTTACTTCGAGCTGTATATGAATTTCCTTTTATATGTGAAAA
CTCGCCAACTAGGTACACTTTTTCGAGTCACATAGCACTCATTTTCTTGG
TTTTGAAAAATTTTCTAAAGAAGTTTACAAGCCTTTTTTGAGTGATTACA
TTTTATGGGTGTTTGTTAAAACTGCTTTCTTGCCTTAAGTGATTCGCGGG
TTTCGGTTCTTGAGTTGGTTATATGTTGGAAGAACAGTAAAGCTAGTTGG
TGTAGAACTTATTCTCTTGTTTTCTGTTGTAATTATATGTAGAAAGTTAT
CGATAAGGGCTGATGTAGTTTTGTTTCATTTATGCATGAAGGGTTTCTTT
CTTTTAAAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR013105	TPR_2
IPR013026	TPR-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

g.arboreum_cottongen_reftransV1_0001270, g.arboreum_cottongen_reftransV1_0001270 (contig) Gossypium arboreum

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