g.arboreum_cottongen_reftransV1_0001270, g.arboreum_cottongen_reftransV1_0001270 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0001270
Unique Nameg.arboreum_cottongen_reftransV1_0001270
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1709
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr7chromosomeg.arboreum_cottongen_reftransV1_0001270:1..1707 .
Chr7:37337523..37341663 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0B0N8L7_GOSAR (Heat shock STI OS=Gossypium arboreum GN=F383_06496 PE=4 SV=1)

HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 2
Query:  269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKEN 1240
            MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKEN
Sbjct:    1 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKEN 324          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0D2PZQ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G024400 PE=4 SV=1)

HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0
Identity = 319/323 (98.76%), Postives = 321/323 (99.38%), Query Frame = 2
Query:  269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFL+LVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAK LETLKSEMSEKYKSEDSWKEMFSFL+ETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEV PRLFKE
Sbjct:    1 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLNLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKCLETLKSEMSEKYKSEDSWKEMFSFLVETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVFPRLFKE 323          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A061ELQ6_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_020683 PE=4 SV=1)

HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0
Identity = 297/330 (90.00%), Postives = 311/330 (94.24%), Query Frame = 2
Query:  269 MAEAEVGSGEGKPQE-------MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEAEVGSG+G P         +SLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFL+LVKLNKAL DAETTITL PQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVD+AKSLETLKSEMSEKY +E+ WK+MF FL+ETME AVKSWHETSKVDPRVYFLLDKEK+Q DKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFS AACLVAPKSIIAYPQVWKGQGSRKW+HGQHDGFFVQFESPLLRKLWFISS+NEMG+TLCR P+VLDIGAHE+LPRLFKE
Sbjct:    1 MAEAEVGSGKGGPAGGNGGEEEISLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLNLVKLNKALTDAETTITLNPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDMAKSLETLKSEMSEKYGAENCWKDMFLFLVETMEAAVKSWHETSKVDPRVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSGAACLVAPKSIIAYPQVWKGQGSRKWRHGQHDGFFVQFESPLLRKLWFISSANEMGQTLCRAPDVLDIGAHELLPRLFKE 330          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A061EL78_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_020683 PE=4 SV=1)

HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0
Identity = 297/336 (88.39%), Postives = 311/336 (92.56%), Query Frame = 2
Query:  269 MAEAEVGSGEGKPQE-------MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEM------SEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEAEVGSG+G P         +SLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFL+LVKLNKAL DAETTITL PQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVD+AKSLETLKSEM      SEKY +E+ WK+MF FL+ETME AVKSWHETSKVDPRVYFLLDKEK+Q DKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFS AACLVAPKSIIAYPQVWKGQGSRKW+HGQHDGFFVQFESPLLRKLWFISS+NEMG+TLCR P+VLDIGAHE+LPRLFKE
Sbjct:    1 MAEAEVGSGKGGPAGGNGGEEEISLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLNLVKLNKALTDAETTITLNPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDMAKSLETLKSEMVLFSLPSEKYGAENCWKDMFLFLVETMEAAVKSWHETSKVDPRVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSGAACLVAPKSIIAYPQVWKGQGSRKWRHGQHDGFFVQFESPLLRKLWFISSANEMGQTLCRAPDVLDIGAHELLPRLFKE 336          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: B9HUR9_POPTR (Tetratricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0010s09300g PE=4 SV=1)

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 273/329 (82.98%), Postives = 300/329 (91.19%), Query Frame = 2
Query:  269 MAEAEVGSG------EGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEAE GS           +E+SLKDKGNEFFKAGNYLKAAALYTQAIK DPSNPTLYSNRAAAFL LVKLNKALADAETTI L PQWEKGYFRKGC+LE MERYDDALA FQIALQ+NPQS EVSRKIKR+SQLA+DKKRAQEVQ++RSNVD+AK LETLKSEM EK  SE+ +K+MFSFL+ETMETAVKSWHE SKVDPRVYFLLDKEK+Q DKYAPVVNIDKAFESPH+HS+CFSFLRQYA+DSFS+AACLV PK+II+YPQVWKGQGSRKWK+GQHDGFFVQ+ES L+RK+WFI+S+NE G+TLCRDPEVLDIGAHEVLPRLFKE
Sbjct:    1 MAEAEKGSATTGSKESNVKEEISLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSNRAAAFLQLVKLNKALADAETTIKLNPQWEKGYFRKGCVLEGMERYDDALATFQIALQHNPQSTEVSRKIKRISQLARDKKRAQEVQSMRSNVDMAKHLETLKSEMFEKLGSEECFKDMFSFLVETMETAVKSWHEASKVDPRVYFLLDKEKTQTDKYAPVVNIDKAFESPHSHSNCFSFLRQYADDSFSKAACLVVPKNIISYPQVWKGQGSRKWKYGQHDGFFVQYESHLMRKIWFIASTNEKGQTLCRDPEVLDIGAHEVLPRLFKE 329          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A067KVT9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02220 PE=4 SV=1)

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 272/324 (83.95%), Postives = 296/324 (91.36%), Query Frame = 2
Query:  269 MAEAEVGSGEGKP-QEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MA A   S EG   +E SLKDKGNEFFKAGN+LKAAALYTQAIK DPSNPTLYSNRAAAFL LVKL+KALADAETTITL PQWEKGYFRKGC+LEAMERYDDALAAFQ ALQYNPQS EVSRKIKR+SQLAK+KKRAQEV++++SNVD+A+ L+ LKSEMSEK +SE+ WKE FSFL+ETME AVKSWHETSKVDPRVYFLLDKEK+Q DKYAP+VNIDKAFESPHTHSSCF+FLRQYAE+SFS+AACLV PKSI++YPQVWKGQGSRKWKHGQHDGFFVQFESP LRKLWFI SSNE G+TLCRDPE LDI  HEVLPRLFKE
Sbjct:    1 MATAAAASTEGNGGEEASLKDKGNEFFKAGNFLKAAALYTQAIKLDPSNPTLYSNRAAAFLQLVKLSKALADAETTITLNPQWEKGYFRKGCVLEAMERYDDALAAFQTALQYNPQSTEVSRKIKRISQLAKEKKRAQEVESIKSNVDMARHLDKLKSEMSEKIESEECWKETFSFLVETMEAAVKSWHETSKVDPRVYFLLDKEKTQTDKYAPMVNIDKAFESPHTHSSCFTFLRQYAEESFSKAACLVVPKSIMSYPQVWKGQGSRKWKHGQHDGFFVQFESPFLRKLWFIPSSNEKGQTLCRDPETLDISVHEVLPRLFKE 324          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: B9HK95_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s15630g PE=4 SV=1)

HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0
Identity = 273/330 (82.73%), Postives = 301/330 (91.21%), Query Frame = 2
Query:  269 MAEAEVGS-------GEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAEAE GS       G GK +E+SLKDKGNEFFKAGNYLKAAALYTQAIK DPSNPTLYSNRAAAFL LVKLNKALADAETTITL PQWEKGYFRKGC+LEAME+YD+ALA FQIALQYNP+S EVSRKIKR+SQLAKDKKRAQEV+++RSNV++ K LETLKSEMSE   SE+ +KEMFSFL+ETMETAVKSWHE SKVDPRVYFLLDKEK+  DKYAPVVNIDKAFESPHTH +CFSFLRQYAEDSFS+AAC+V PK+II+YPQVWKGQGSRKW+HGQHDG FVQ+ESPL+RK+WFI+SSNE G+TLCRDPE+LDI AHEVLPRLFKE
Sbjct:    1 MAEAEKGSATTGSNEGNGK-EEISLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSNRAAAFLQLVKLNKALADAETTITLNPQWEKGYFRKGCVLEAMEQYDNALATFQIALQYNPRSTEVSRKIKRISQLAKDKKRAQEVESMRSNVNMEKHLETLKSEMSEMLGSEECFKEMFSFLVETMETAVKSWHEASKVDPRVYFLLDKEKTLTDKYAPVVNIDKAFESPHTHGNCFSFLRQYAEDSFSKAACVVVPKNIISYPQVWKGQGSRKWRHGQHDGIFVQYESPLMRKIWFIASSNEKGQTLCRDPEILDISAHEVLPRLFKE 329          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: B9RTL2_RICCO (Heat shock protein 70 (HSP70)-interacting protein, putative OS=Ricinus communis GN=RCOM_0911270 PE=4 SV=1)

HSP 1 Score: 570.081 bits (1468), Expect = 0.000e+0
Identity = 271/322 (84.16%), Postives = 295/322 (91.61%), Query Frame = 2
Query:  272 AEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            A A    G G  +E+SLKDKGNEFFKAGNYLKAAALYTQAIK DPSNPTLYSNRAAAFL LVKLNKALADAE TITL PQWEKGYFRKGC+LEAMERYDDA AAFQ AL+YNPQS+EVSRKIKR+SQLAK+KKRAQEV+++RSNVD+AK  + LKSEMSEK  SE+  KE+FSFL+ETME AVKSWHETSKVDPRVYFLLDKEK+Q+DKYAP VNIDKAFESPHTHSSCF+FLRQYAE+SFS+AACLVAPKSII+YPQVWKGQGSRKWKHGQHDGFFVQFESP LRKLWFISS+NE G+TLCRDPE+LDI AHEV PRLFKE
Sbjct:    5 ATAASTDGNGG-EEVSLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSNRAAAFLQLVKLNKALADAEMTITLNPQWEKGYFRKGCVLEAMERYDDASAAFQTALKYNPQSSEVSRKIKRISQLAKEKKRAQEVESMRSNVDLAKHFDKLKSEMSEKIGSEECLKEIFSFLVETMEMAVKSWHETSKVDPRVYFLLDKEKTQSDKYAPAVNIDKAFESPHTHSSCFTFLRQYAEESFSKAACLVAPKSIISYPQVWKGQGSRKWKHGQHDGFFVQFESPCLRKLWFISSTNEKGQTLCRDPEMLDISAHEVFPRLFKE 325          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: V4S3B3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005444mg PE=4 SV=1)

HSP 1 Score: 566.614 bits (1459), Expect = 0.000e+0
Identity = 263/310 (84.84%), Postives = 288/310 (92.90%), Query Frame = 2
Query:  308 QEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            +EMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTL+SNRAAAFLHLVKLNKALADAETTI+L PQWEKGYFRKGCILEAME+YDDAL+AFQ ALQYNPQSAEVSRKIKR+SQLAKDKKRAQEV+N+RSNVD+ + L+  KSEMSEKY +E+ WK +FSF++ETMETAVKSWHETSKVD +VYFLLDKEK+  +KYAP+VN+DKAFESPHTH SCF FLRQYA+DSFS AACLVAPKSII+YPQVW+GQG RKW+H Q DGFFVQFESPLLRKLWFI SSNE GKTLCRDPEVLDI AHEV PRLFKE
Sbjct:    6 EEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQHLDEFKSEMSEKYGAEECWKHVFSFVVETMETAVKSWHETSKVDAKVYFLLDKEKTDTEKYAPIVNVDKAFESPHTHGSCFQFLRQYADDSFSSAACLVAPKSIISYPQVWRGQGLRKWRHSQQDGFFVQFESPLLRKLWFIPSSNEKGKTLCRDPEVLDISAHEVFPRLFKE 315          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: W9QR79_9ROSA (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Morus notabilis GN=L484_009109 PE=4 SV=1)

HSP 1 Score: 556.214 bits (1432), Expect = 0.000e+0
Identity = 263/329 (79.94%), Postives = 293/329 (89.06%), Query Frame = 2
Query:  269 MAEAEVGSGEGKPQEM------SLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237
            MAE+E GS      E       SLK+KGNE+FKAGN+LKAAALYTQAIKQDP+NP  YSNRAAAFL LVKLNKALADAETTI L P+WEKGYFRKGCILEAMERYDDAL AFQ A+Q+NPQS EVS+KIKR++QLAK+KKRAQEV+N+RSNVD+AK L+ LK+EMSEK  SE+ WKEMFSFL+ETMETAVKSWHETS+VDPRVYFLLDKE++Q +KYAP VNIDKAFESPHTHS CFSFLRQYAEDSFSRAACLV+PKSII+YPQVWKGQG RKWKHG  DGFFVQFE+P+LR+LWFI SSNE G+TLCRDPEVLDI AHEVLPRL+KE
Sbjct:    1 MAESEAGSRTAGASEGGGGEEKSLKEKGNEYFKAGNFLKAAALYTQAIKQDPNNPAFYSNRAAAFLQLVKLNKALADAETTIALSPKWEKGYFRKGCILEAMERYDDALTAFQTAVQFNPQSVEVSKKIKRIAQLAKNKKRAQEVENMRSNVDMAKHLDKLKAEMSEKCGSEECWKEMFSFLVETMETAVKSWHETSEVDPRVYFLLDKERTQTEKYAPAVNIDKAFESPHTHSDCFSFLRQYAEDSFSRAACLVSPKSIISYPQVWKGQGLRKWKHGLQDGFFVQFETPVLRRLWFIPSSNEQGQTLCRDPEVLDITAHEVLPRLYKE 329          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: RPAP3_RAT (RNA polymerase II-associated protein 3 OS=Rattus norvegicus GN=Rpap3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.062e-13
Identity = 38/113 (33.63%), Postives = 64/113 (56.64%), Query Frame = 2
Query:  314 MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652
            + LK+KGN++FK G Y +A   YT+ +  DP NP L +NRA+A+  L K   A +D    I L   + K Y R+G    A+++ +DA   +   L+  P + E + +++++ Q
Sbjct:  134 LVLKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAIALSRSYTKAYARRGAARFALQKLEDARKDYVKVLELEPDNFEATNELRKIDQ 246          

HSP 2 Score: 63.5438 bits (153), Expect = 2.766e-9
Identity = 42/141 (29.79%), Postives = 70/141 (49.65%), Query Frame = 2
Query:  272 AEAEVGSGE---GKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEV 685
            AE E  + E   G+ + ++ KD GN FFK G Y +A   YT+ I  D +N  L +NRA A+L + K  +A  D    I L   + K + R+G     + + ++A   F+  L   P + +   ++ R+ +   +K R  +V
Sbjct:  266 AEGERKANEDQRGRQKAIAEKDLGNGFFKEGKYEQAIECYTRGIAADSTNALLPANRAMAYLKVQKYEEAERDCTQAILLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAVTELSRIKKELIEKGRWDDV 406          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: RPAP3_HUMAN (RNA polymerase II-associated protein 3 OS=Homo sapiens GN=RPAP3 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.402e-13
Identity = 37/113 (32.74%), Postives = 66/113 (58.41%), Query Frame = 2
Query:  314 MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652
            + LK+KGN++FK G Y +A   YT+ +  DP NP L +NRA+A+  L K   A +D    + L   + K Y R+G    A+++ ++A   ++  L+  P + E + +++++SQ
Sbjct:  134 LVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELRKISQ 246          

HSP 2 Score: 65.4698 bits (158), Expect = 8.634e-10
Identity = 39/128 (30.47%), Postives = 66/128 (51.56%), Query Frame = 2
Query:  281 EVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKD 664
            ++ + + K Q +S KD+GN FFK G Y +A   YT+ I  D +N  L +NRA A+L + K  +A  D    I L   + K + R+G     + + ++A   F+  L   P + +    +  LS++ K+
Sbjct:  272 QIEAQQNKQQAISEKDRGNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQA---VTELSKIKKE 396          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STI1L_PLAF7 (STI1-like protein OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0324 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.219e-13
Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 2
Query:  323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR----LSQLAKDKKRAQE 682
            K+KGNE+FK  ++  A   Y +AI+++P++  LYSNRAAA   L++   AL D    I L P + K Y RKG +   M+ Y  AL A+   L+ +P + E     +R    + +++K +K  +E
Sbjct:  382 KNKGNEYFKNNDFPNAKKEYDEAIRRNPNDAKLYSNRAAALTKLIEYPSALEDVMKAIELDPTFVKAYSRKGNLHFFMKDYYKALQAYNKGLELDPNNKECLEGYQRCAFKIDEMSKSEKVDEE 505          

HSP 2 Score: 70.8626 bits (172), Expect = 1.468e-11
Identity = 45/153 (29.41%), Postives = 77/153 (50.33%), Query Frame = 2
Query:  299 GKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVS---RKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMS 748
             K +   LK+ GN+ F+ G Y +A   ++ AI  DP +  LYSN + AF  L +  +AL  A   I++K  W KGY RKGC    + +  +A   +   L+ +P +  +     K++  + L    + AQ + +L + ++    L++ K E S
Sbjct:    3 NKEEAQRLKELGNKCFQEGKYEEAVKYFSDAITNDPLDHVLYSNLSGAFASLGRFYEALESANKCISIKKDWPKGYIRKGCAEHGLRQLSNAEKTYLEGLKIDPNNKSLQDALSKVRNENML----ENAQLIAHLNNIIENDPQLKSYKEENS 151          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: PPP5_HUMAN (Serine/threonine-protein phosphatase 5 OS=Homo sapiens GN=PPP5C PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.608e-13
Identity = 48/167 (28.74%), Postives = 82/167 (49.10%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKY---KSEDSWKEMFSFLIETME 811
            LK + N++FKA +Y  A   Y+QAI+ +PSN   Y NR+ A+L       AL DA   I L  ++ KGY+R+     A+ ++  AL  ++  ++  P   +   K +  +++ K K   + +        +  SL+     + ++Y   K ED  K   SF+ E M+
Sbjct:   31 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDG-KVTISFMKELMQ 196          
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: PPP5_SOLLC (Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.407e-13
Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 2
Query:  320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIK 640
            LK   NE FK   Y +A  LYTQAI+ +  N   Y+NRA A   L +   A+ D    I + P++ KGY+R+G    AM ++ DAL  FQ   +  P   + ++K+K
Sbjct:   17 LKQLANEAFKGHKYSQAIDLYTQAIELNGENAVYYANRAFAHTKLEEYGSAIQDGTRAIEIDPRYSKGYYRRGAAYLAMGKFKDALKDFQQVKKLCPNDPDATKKLK 123          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0N8L7_GOSAR0.000e+0100.00Heat shock STI OS=Gossypium arboreum GN=F383_06496... [more]
A0A0D2PZQ8_GOSRA0.000e+098.76Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061ELQ6_THECC0.000e+090.00Tetratricopeptide repeat (TPR)-like superfamily pr... [more]
A0A061EL78_THECC0.000e+088.39Tetratricopeptide repeat (TPR)-like superfamily pr... [more]
B9HUR9_POPTR0.000e+082.98Tetratricopeptide repeat-containing family protein... [more]
A0A067KVT9_JATCU0.000e+083.95Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
B9HK95_POPTR0.000e+082.73Uncharacterized protein OS=Populus trichocarpa GN=... [more]
B9RTL2_RICCO0.000e+084.16Heat shock protein 70 (HSP70)-interacting protein,... [more]
V4S3B3_9ROSI0.000e+084.84Uncharacterized protein OS=Citrus clementina GN=CI... [more]
W9QR79_9ROSA0.000e+079.94Small glutamine-rich tetratricopeptide repeat-cont... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RPAP3_RAT1.062e-1333.63RNA polymerase II-associated protein 3 OS=Rattus n... [more]
RPAP3_HUMAN1.402e-1332.74RNA polymerase II-associated protein 3 OS=Homo sap... [more]
STI1L_PLAF73.219e-1335.48STI1-like protein OS=Plasmodium falciparum (isolat... [more]
PPP5_HUMAN3.608e-1328.74Serine/threonine-protein phosphatase 5 OS=Homo sap... [more]
PPP5_SOLLC5.407e-1337.38Serine/threonine-protein phosphatase 5 OS=Solanum ... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 49..82
e-value: 8.1
score: 15.4
coord: 83..116
e-value: 6.8E-5
score: 32.3
coord: 15..48
e-value: 0.0071
score: 25.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 15..48
score: 9.352
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 49..82
score: 6.018
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 83..116
score: 9.765
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 16..144
e-value: 1.2E-33
score: 115.4
IPR011990Tetratricopeptide-like helical domainPFAMPF13414TPR_11coord: 22..60
e-value: 1.4E-9
score: 37.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 17..126
IPR013105Tetratricopeptide repeat 2PFAMPF07719TPR_2coord: 84..115
e-value: 8.6E-6
score: 25.4
NoneNo IPR availablePANTHERPTHR22904:SF289CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN-RELATEDcoord: 13..193
NoneNo IPR availablePANTHERPTHR22904:SF289CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN-RELATEDcoord: 252..311
NoneNo IPR availablePANTHERPTHR22904TPR REPEAT CONTAINING PROTEINcoord: 252..311
coord: 13..193
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 15..116
score: 21.994

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0001270 ID=g.arboreum_cottongen_reftransV1_0001270; Name=g.arboreum_cottongen_reftransV1_0001270; organism=Gossypium arboreum; type=contig; length=1709bp
GTTTAGTTTACCCATAATTTTTTTAAGGAAAAAACCAGAGCTCACTCTTG
TAATTTTGCTTAGGGTTTTCTTTTAATCAAAACTAATCTGATTCTCCTTT
CTACTCCAAAATCACCAAAAGCCCAGATTTTGTTTAGAAATTAGAAAACT
CCATCGTTTATACCGCTGTTAAATACCTCCATAGACATCATCCCCTCAGA
AAAGTAGAAGCTTCTCTCTCCCATTAACCCTAACTACACAACAAATAAAA
TTACTTCAAAACAATAGGATGGCAGAAGCAGAGGTAGGATCTGGTGAAGG
AAAGCCCCAAGAGATGTCGTTGAAGGATAAAGGGAATGAGTTTTTCAAGG
CTGGGAACTACCTTAAAGCTGCTGCTCTTTACACTCAGGCCATTAAACAA
GACCCTTCAAATCCCACTCTTTATAGCAATCGAGCAGCAGCGTTTCTACA
TTTGGTTAAACTTAACAAAGCGCTGGCTGATGCTGAGACAACAATTACTT
TGAAACCTCAGTGGGAAAAGGGATATTTTCGAAAAGGATGCATTTTAGAG
GCTATGGAACGATATGACGATGCTTTAGCTGCCTTCCAAATAGCTTTGCA
GTACAACCCACAAAGTGCAGAAGTCTCAAGAAAAATTAAGAGACTTTCAC
AGCTTGCAAAAGATAAAAAGCGAGCTCAAGAAGTGCAAAACTTGCGATCC
AATGTAGATATAGCAAAAAGCTTGGAAACATTGAAATCTGAAATGTCTGA
AAAGTACAAATCGGAAGATAGTTGGAAAGAGATGTTTTCTTTTCTTATTG
AGACAATGGAAACAGCTGTAAAATCATGGCATGAGACTTCCAAAGTGGAT
CCTAGAGTCTACTTCCTTCTTGATAAGGAGAAGAGCCAAGCCGATAAATA
TGCTCCAGTTGTCAATATTGACAAGGCTTTTGAATCGCCTCATACGCACA
GCAGTTGTTTTTCATTTCTTAGGCAATATGCTGAAGATTCTTTCTCTAGA
GCAGCTTGTTTAGTTGCTCCTAAAAGTATCATAGCTTATCCACAGGTCTG
GAAAGGTCAGGGTTCAAGGAAGTGGAAGCATGGGCAACATGATGGTTTCT
TTGTTCAATTCGAGTCACCACTCTTGCGAAAACTATGGTTTATTTCGAGT
TCCAATGAGATGGGGAAGACACTGTGCAGGGATCCAGAGGTTCTAGATAT
AGGTGCACATGAAGTACTTCCACGCCTTTTCAAAGAAAATCTATCCAGTT
CCTCATGAGCTTTATCTTAGGCTGAAGGAAATTGCTAGGCATGCCGGTGG
ACTTTGATTGCGAGGTTTACATATGAAAAAAGGTACCAACAACATAGCGT
GCTTGCTTGTTACTTCGAGCTGTATATGAATTTCCTTTTATATGTGAAAA
CTCGCCAACTAGGTACACTTTTTCGAGTCACATAGCACTCATTTTCTTGG
TTTTGAAAAATTTTCTAAAGAAGTTTACAAGCCTTTTTTGAGTGATTACA
TTTTATGGGTGTTTGTTAAAACTGCTTTCTTGCCTTAAGTGATTCGCGGG
TTTCGGTTCTTGAGTTGGTTATATGTTGGAAGAACAGTAAAGCTAGTTGG
TGTAGAACTTATTCTCTTGTTTTCTGTTGTAATTATATGTAGAAAGTTAT
CGATAAGGGCTGATGTAGTTTTGTTTCATTTATGCATGAAGGGTTTCTTT
CTTTTAAAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013105TPR_2
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding