g.arboreum_cottongen_reftransV1_0001270, g.arboreum_cottongen_reftransV1_0001270 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0B0N8L7_GOSAR (Heat shock STI OS=Gossypium arboreum GN=F383_06496 PE=4 SV=1) HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 2 Query: 269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKEN 1240 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKEN Sbjct: 1 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKEN 324
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A0D2PZQ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G024400 PE=4 SV=1) HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0 Identity = 319/323 (98.76%), Postives = 321/323 (99.38%), Query Frame = 2 Query: 269 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFL+LVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAK LETLKSEMSEKYKSEDSWKEMFSFL+ETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEV PRLFKE Sbjct: 1 MAEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLNLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKCLETLKSEMSEKYKSEDSWKEMFSFLVETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVFPRLFKE 323
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A061ELQ6_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_020683 PE=4 SV=1) HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0 Identity = 297/330 (90.00%), Postives = 311/330 (94.24%), Query Frame = 2 Query: 269 MAEAEVGSGEGKPQE-------MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 MAEAEVGSG+G P +SLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFL+LVKLNKAL DAETTITL PQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVD+AKSLETLKSEMSEKY +E+ WK+MF FL+ETME AVKSWHETSKVDPRVYFLLDKEK+Q DKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFS AACLVAPKSIIAYPQVWKGQGSRKW+HGQHDGFFVQFESPLLRKLWFISS+NEMG+TLCR P+VLDIGAHE+LPRLFKE Sbjct: 1 MAEAEVGSGKGGPAGGNGGEEEISLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLNLVKLNKALTDAETTITLNPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDMAKSLETLKSEMSEKYGAENCWKDMFLFLVETMEAAVKSWHETSKVDPRVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSGAACLVAPKSIIAYPQVWKGQGSRKWRHGQHDGFFVQFESPLLRKLWFISSANEMGQTLCRAPDVLDIGAHELLPRLFKE 330
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A061EL78_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_020683 PE=4 SV=1) HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0 Identity = 297/336 (88.39%), Postives = 311/336 (92.56%), Query Frame = 2 Query: 269 MAEAEVGSGEGKPQE-------MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEM------SEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 MAEAEVGSG+G P +SLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFL+LVKLNKAL DAETTITL PQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVD+AKSLETLKSEM SEKY +E+ WK+MF FL+ETME AVKSWHETSKVDPRVYFLLDKEK+Q DKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFS AACLVAPKSIIAYPQVWKGQGSRKW+HGQHDGFFVQFESPLLRKLWFISS+NEMG+TLCR P+VLDIGAHE+LPRLFKE Sbjct: 1 MAEAEVGSGKGGPAGGNGGEEEISLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLNLVKLNKALTDAETTITLNPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDMAKSLETLKSEMVLFSLPSEKYGAENCWKDMFLFLVETMEAAVKSWHETSKVDPRVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSGAACLVAPKSIIAYPQVWKGQGSRKWRHGQHDGFFVQFESPLLRKLWFISSANEMGQTLCRAPDVLDIGAHELLPRLFKE 336
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: B9HUR9_POPTR (Tetratricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0010s09300g PE=4 SV=1) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 273/329 (82.98%), Postives = 300/329 (91.19%), Query Frame = 2 Query: 269 MAEAEVGSG------EGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 MAEAE GS +E+SLKDKGNEFFKAGNYLKAAALYTQAIK DPSNPTLYSNRAAAFL LVKLNKALADAETTI L PQWEKGYFRKGC+LE MERYDDALA FQIALQ+NPQS EVSRKIKR+SQLA+DKKRAQEVQ++RSNVD+AK LETLKSEM EK SE+ +K+MFSFL+ETMETAVKSWHE SKVDPRVYFLLDKEK+Q DKYAPVVNIDKAFESPH+HS+CFSFLRQYA+DSFS+AACLV PK+II+YPQVWKGQGSRKWK+GQHDGFFVQ+ES L+RK+WFI+S+NE G+TLCRDPEVLDIGAHEVLPRLFKE Sbjct: 1 MAEAEKGSATTGSKESNVKEEISLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSNRAAAFLQLVKLNKALADAETTIKLNPQWEKGYFRKGCVLEGMERYDDALATFQIALQHNPQSTEVSRKIKRISQLARDKKRAQEVQSMRSNVDMAKHLETLKSEMFEKLGSEECFKDMFSFLVETMETAVKSWHEASKVDPRVYFLLDKEKTQTDKYAPVVNIDKAFESPHSHSNCFSFLRQYADDSFSKAACLVVPKNIISYPQVWKGQGSRKWKYGQHDGFFVQYESHLMRKIWFIASTNEKGQTLCRDPEVLDIGAHEVLPRLFKE 329
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: A0A067KVT9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02220 PE=4 SV=1) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 272/324 (83.95%), Postives = 296/324 (91.36%), Query Frame = 2 Query: 269 MAEAEVGSGEGKP-QEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 MA A S EG +E SLKDKGNEFFKAGN+LKAAALYTQAIK DPSNPTLYSNRAAAFL LVKL+KALADAETTITL PQWEKGYFRKGC+LEAMERYDDALAAFQ ALQYNPQS EVSRKIKR+SQLAK+KKRAQEV++++SNVD+A+ L+ LKSEMSEK +SE+ WKE FSFL+ETME AVKSWHETSKVDPRVYFLLDKEK+Q DKYAP+VNIDKAFESPHTHSSCF+FLRQYAE+SFS+AACLV PKSI++YPQVWKGQGSRKWKHGQHDGFFVQFESP LRKLWFI SSNE G+TLCRDPE LDI HEVLPRLFKE Sbjct: 1 MATAAAASTEGNGGEEASLKDKGNEFFKAGNFLKAAALYTQAIKLDPSNPTLYSNRAAAFLQLVKLSKALADAETTITLNPQWEKGYFRKGCVLEAMERYDDALAAFQTALQYNPQSTEVSRKIKRISQLAKEKKRAQEVESIKSNVDMARHLDKLKSEMSEKIESEECWKETFSFLVETMEAAVKSWHETSKVDPRVYFLLDKEKTQTDKYAPMVNIDKAFESPHTHSSCFTFLRQYAEESFSKAACLVVPKSIMSYPQVWKGQGSRKWKHGQHDGFFVQFESPFLRKLWFIPSSNEKGQTLCRDPETLDISVHEVLPRLFKE 324
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: B9HK95_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s15630g PE=4 SV=1) HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0 Identity = 273/330 (82.73%), Postives = 301/330 (91.21%), Query Frame = 2 Query: 269 MAEAEVGS-------GEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 MAEAE GS G GK +E+SLKDKGNEFFKAGNYLKAAALYTQAIK DPSNPTLYSNRAAAFL LVKLNKALADAETTITL PQWEKGYFRKGC+LEAME+YD+ALA FQIALQYNP+S EVSRKIKR+SQLAKDKKRAQEV+++RSNV++ K LETLKSEMSE SE+ +KEMFSFL+ETMETAVKSWHE SKVDPRVYFLLDKEK+ DKYAPVVNIDKAFESPHTH +CFSFLRQYAEDSFS+AAC+V PK+II+YPQVWKGQGSRKW+HGQHDG FVQ+ESPL+RK+WFI+SSNE G+TLCRDPE+LDI AHEVLPRLFKE Sbjct: 1 MAEAEKGSATTGSNEGNGK-EEISLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSNRAAAFLQLVKLNKALADAETTITLNPQWEKGYFRKGCVLEAMEQYDNALATFQIALQYNPRSTEVSRKIKRISQLAKDKKRAQEVESMRSNVNMEKHLETLKSEMSEMLGSEECFKEMFSFLVETMETAVKSWHEASKVDPRVYFLLDKEKTLTDKYAPVVNIDKAFESPHTHGNCFSFLRQYAEDSFSKAACVVVPKNIISYPQVWKGQGSRKWRHGQHDGIFVQYESPLMRKIWFIASSNEKGQTLCRDPEILDISAHEVLPRLFKE 329
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: B9RTL2_RICCO (Heat shock protein 70 (HSP70)-interacting protein, putative OS=Ricinus communis GN=RCOM_0911270 PE=4 SV=1) HSP 1 Score: 570.081 bits (1468), Expect = 0.000e+0 Identity = 271/322 (84.16%), Postives = 295/322 (91.61%), Query Frame = 2 Query: 272 AEAEVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 A A G G +E+SLKDKGNEFFKAGNYLKAAALYTQAIK DPSNPTLYSNRAAAFL LVKLNKALADAE TITL PQWEKGYFRKGC+LEAMERYDDA AAFQ AL+YNPQS+EVSRKIKR+SQLAK+KKRAQEV+++RSNVD+AK + LKSEMSEK SE+ KE+FSFL+ETME AVKSWHETSKVDPRVYFLLDKEK+Q+DKYAP VNIDKAFESPHTHSSCF+FLRQYAE+SFS+AACLVAPKSII+YPQVWKGQGSRKWKHGQHDGFFVQFESP LRKLWFISS+NE G+TLCRDPE+LDI AHEV PRLFKE Sbjct: 5 ATAASTDGNGG-EEVSLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNPTLYSNRAAAFLQLVKLNKALADAEMTITLNPQWEKGYFRKGCVLEAMERYDDASAAFQTALKYNPQSSEVSRKIKRISQLAKEKKRAQEVESMRSNVDLAKHFDKLKSEMSEKIGSEECLKEIFSFLVETMEMAVKSWHETSKVDPRVYFLLDKEKTQSDKYAPAVNIDKAFESPHTHSSCFTFLRQYAEESFSKAACLVAPKSIISYPQVWKGQGSRKWKHGQHDGFFVQFESPCLRKLWFISSTNEKGQTLCRDPEMLDISAHEVFPRLFKE 325
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: V4S3B3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005444mg PE=4 SV=1) HSP 1 Score: 566.614 bits (1459), Expect = 0.000e+0 Identity = 263/310 (84.84%), Postives = 288/310 (92.90%), Query Frame = 2 Query: 308 QEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 +EMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTL+SNRAAAFLHLVKLNKALADAETTI+L PQWEKGYFRKGCILEAME+YDDAL+AFQ ALQYNPQSAEVSRKIKR+SQLAKDKKRAQEV+N+RSNVD+ + L+ KSEMSEKY +E+ WK +FSF++ETMETAVKSWHETSKVD +VYFLLDKEK+ +KYAP+VN+DKAFESPHTH SCF FLRQYA+DSFS AACLVAPKSII+YPQVW+GQG RKW+H Q DGFFVQFESPLLRKLWFI SSNE GKTLCRDPEVLDI AHEV PRLFKE Sbjct: 6 EEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLFSNRAAAFLHLVKLNKALADAETTISLNPQWEKGYFRKGCILEAMEQYDDALSAFQTALQYNPQSAEVSRKIKRVSQLAKDKKRAQEVENIRSNVDMVQHLDEFKSEMSEKYGAEECWKHVFSFVVETMETAVKSWHETSKVDAKVYFLLDKEKTDTEKYAPIVNVDKAFESPHTHGSCFQFLRQYADDSFSSAACLVAPKSIISYPQVWRGQGLRKWRHSQQDGFFVQFESPLLRKLWFIPSSNEKGKTLCRDPEVLDISAHEVFPRLFKE 315
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Match: W9QR79_9ROSA (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Morus notabilis GN=L484_009109 PE=4 SV=1) HSP 1 Score: 556.214 bits (1432), Expect = 0.000e+0 Identity = 263/329 (79.94%), Postives = 293/329 (89.06%), Query Frame = 2 Query: 269 MAEAEVGSGEGKPQEM------SLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKYKSEDSWKEMFSFLIETMETAVKSWHETSKVDPRVYFLLDKEKSQADKYAPVVNIDKAFESPHTHSSCFSFLRQYAEDSFSRAACLVAPKSIIAYPQVWKGQGSRKWKHGQHDGFFVQFESPLLRKLWFISSSNEMGKTLCRDPEVLDIGAHEVLPRLFKE 1237 MAE+E GS E SLK+KGNE+FKAGN+LKAAALYTQAIKQDP+NP YSNRAAAFL LVKLNKALADAETTI L P+WEKGYFRKGCILEAMERYDDAL AFQ A+Q+NPQS EVS+KIKR++QLAK+KKRAQEV+N+RSNVD+AK L+ LK+EMSEK SE+ WKEMFSFL+ETMETAVKSWHETS+VDPRVYFLLDKE++Q +KYAP VNIDKAFESPHTHS CFSFLRQYAEDSFSRAACLV+PKSII+YPQVWKGQG RKWKHG DGFFVQFE+P+LR+LWFI SSNE G+TLCRDPEVLDI AHEVLPRL+KE Sbjct: 1 MAESEAGSRTAGASEGGGGEEKSLKEKGNEYFKAGNFLKAAALYTQAIKQDPNNPAFYSNRAAAFLQLVKLNKALADAETTIALSPKWEKGYFRKGCILEAMERYDDALTAFQTAVQFNPQSVEVSKKIKRIAQLAKNKKRAQEVENMRSNVDMAKHLDKLKAEMSEKCGSEECWKEMFSFLVETMETAVKSWHETSEVDPRVYFLLDKERTQTEKYAPAVNIDKAFESPHTHSDCFSFLRQYAEDSFSRAACLVSPKSIISYPQVWKGQGLRKWKHGLQDGFFVQFETPVLRRLWFIPSSNEQGQTLCRDPEVLDITAHEVLPRLYKE 329
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: RPAP3_RAT (RNA polymerase II-associated protein 3 OS=Rattus norvegicus GN=Rpap3 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.062e-13 Identity = 38/113 (33.63%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 314 MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652 + LK+KGN++FK G Y +A YT+ + DP NP L +NRA+A+ L K A +D I L + K Y R+G A+++ +DA + L+ P + E + +++++ Q Sbjct: 134 LVLKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAIALSRSYTKAYARRGAARFALQKLEDARKDYVKVLELEPDNFEATNELRKIDQ 246 HSP 2 Score: 63.5438 bits (153), Expect = 2.766e-9 Identity = 42/141 (29.79%), Postives = 70/141 (49.65%), Query Frame = 2 Query: 272 AEAEVGSGE---GKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEV 685 AE E + E G+ + ++ KD GN FFK G Y +A YT+ I D +N L +NRA A+L + K +A D I L + K + R+G + + ++A F+ L P + + ++ R+ + +K R +V Sbjct: 266 AEGERKANEDQRGRQKAIAEKDLGNGFFKEGKYEQAIECYTRGIAADSTNALLPANRAMAYLKVQKYEEAERDCTQAILLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAVTELSRIKKELIEKGRWDDV 406
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: RPAP3_HUMAN (RNA polymerase II-associated protein 3 OS=Homo sapiens GN=RPAP3 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.402e-13 Identity = 37/113 (32.74%), Postives = 66/113 (58.41%), Query Frame = 2 Query: 314 MSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQ 652 + LK+KGN++FK G Y +A YT+ + DP NP L +NRA+A+ L K A +D + L + K Y R+G A+++ ++A ++ L+ P + E + +++++SQ Sbjct: 134 LVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELRKISQ 246 HSP 2 Score: 65.4698 bits (158), Expect = 8.634e-10 Identity = 39/128 (30.47%), Postives = 66/128 (51.56%), Query Frame = 2 Query: 281 EVGSGEGKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKD 664 ++ + + K Q +S KD+GN FFK G Y +A YT+ I D +N L +NRA A+L + K +A D I L + K + R+G + + ++A F+ L P + + + LS++ K+ Sbjct: 272 QIEAQQNKQQAISEKDRGNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQA---VTELSKIKKE 396
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: STI1L_PLAF7 (STI1-like protein OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0324 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.219e-13 Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 2 Query: 323 KDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKR----LSQLAKDKKRAQE 682 K+KGNE+FK ++ A Y +AI+++P++ LYSNRAAA L++ AL D I L P + K Y RKG + M+ Y AL A+ L+ +P + E +R + +++K +K +E Sbjct: 382 KNKGNEYFKNNDFPNAKKEYDEAIRRNPNDAKLYSNRAAALTKLIEYPSALEDVMKAIELDPTFVKAYSRKGNLHFFMKDYYKALQAYNKGLELDPNNKECLEGYQRCAFKIDEMSKSEKVDEE 505 HSP 2 Score: 70.8626 bits (172), Expect = 1.468e-11 Identity = 45/153 (29.41%), Postives = 77/153 (50.33%), Query Frame = 2 Query: 299 GKPQEMSLKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVS---RKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMS 748 K + LK+ GN+ F+ G Y +A ++ AI DP + LYSN + AF L + +AL A I++K W KGY RKGC + + +A + L+ +P + + K++ + L + AQ + +L + ++ L++ K E S Sbjct: 3 NKEEAQRLKELGNKCFQEGKYEEAVKYFSDAITNDPLDHVLYSNLSGAFASLGRFYEALESANKCISIKKDWPKGYIRKGCAEHGLRQLSNAEKTYLEGLKIDPNNKSLQDALSKVRNENML----ENAQLIAHLNNIIENDPQLKSYKEENS 151
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: PPP5_HUMAN (Serine/threonine-protein phosphatase 5 OS=Homo sapiens GN=PPP5C PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.608e-13 Identity = 48/167 (28.74%), Postives = 82/167 (49.10%), Query Frame = 2 Query: 320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIKRLSQLAKDKKRAQEVQNLRSNVDIAKSLETLKSEMSEKY---KSEDSWKEMFSFLIETME 811 LK + N++FKA +Y A Y+QAI+ +PSN Y NR+ A+L AL DA I L ++ KGY+R+ A+ ++ AL ++ ++ P + K + +++ K K + + + SL+ + ++Y K ED K SF+ E M+ Sbjct: 31 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDG-KVTISFMKELMQ 196
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Match: PPP5_SOLLC (Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.407e-13 Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 320 LKDKGNEFFKAGNYLKAAALYTQAIKQDPSNPTLYSNRAAAFLHLVKLNKALADAETTITLKPQWEKGYFRKGCILEAMERYDDALAAFQIALQYNPQSAEVSRKIK 640 LK NE FK Y +A LYTQAI+ + N Y+NRA A L + A+ D I + P++ KGY+R+G AM ++ DAL FQ + P + ++K+K Sbjct: 17 LKQLANEAFKGHKYSQAIDLYTQAIELNGENAVYYANRAFAHTKLEEYGSAIQDGTRAIEIDPRYSKGYYRRGAAYLAMGKFKDALKDFQQVKKLCPNDPDATKKLK 123 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0001270 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0001270 ID=g.arboreum_cottongen_reftransV1_0001270; Name=g.arboreum_cottongen_reftransV1_0001270; organism=Gossypium arboreum; type=contig; length=1709bpback to top |