g.arboreum_cottongen_reftransV1_0021466, g.arboreum_cottongen_reftransV1_0021466 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy TrEMBL
Match: A0A0B0Q234_GOSAR (Dna-directed rna polymerases i, ii, and iii subunit rpabc1 OS=Gossypium arboreum GN=F383_16361 PE=4 SV=1) HSP 1 Score: 465.692 bits (1197), Expect = 6.202e-163 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = -2 Query: 192 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRMLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW 875 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRMLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW Sbjct: 1 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRMLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW 228
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy TrEMBL
Match: A0A0D2NJ30_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1333002 PE=4 SV=1) HSP 1 Score: 461.84 bits (1187), Expect = 2.412e-161 Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = -2 Query: 192 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRMLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW 875 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRY+LSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKR LVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW Sbjct: 1 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYYLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRTLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW 228
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy TrEMBL
Match: A0A0D2RU93_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1333002 PE=4 SV=1) HSP 1 Score: 457.603 bits (1176), Expect = 1.196e-159 Identity = 226/229 (98.69%), Postives = 227/229 (99.13%), Query Frame = -2 Query: 192 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRM-LVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW 875 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRY+LSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKR LVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW Sbjct: 1 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYYLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRQTLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW 229
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy TrEMBL
Match: A0A061EW60_THECC (Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1 OS=Theobroma cacao GN=TCM_024387 PE=4 SV=1) HSP 1 Score: 421.779 bits (1083), Expect = 1.492e-145 Identity = 201/228 (88.16%), Postives = 220/228 (96.49%), Query Frame = -2 Query: 192 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRMLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW 875 MEG GLEGDGSNGEALGKCLSG+VDDGSTESHRY+LSRRTVLEMLRDRGYAVP +EI+LSL EFRAI+GQSPDFDRL+LS THKTD SKR+LVVFYGPG+VKVSGIRLIAGLIT+KE+LTGLIL++QNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKP+H+VLTE EKQ+LLQKYSIEEKQLPRLLKKDAIARYYG+E+GQV+KV Y GEIT+SHVTYRCVW Sbjct: 1 MEGNGLEGDGSNGEALGKCLSGVVDDGSTESHRYYLSRRTVLEMLRDRGYAVPISEINLSLQEFRAIYGQSPDFDRLRLSATHKTDPSKRILVVFYGPGMVKVSGIRLIAGLITNKESLTGLILVLQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPKHQVLTEQEKQKLLQKYSIEEKQLPRLLKKDAIARYYGYERGQVVKVMYDGEITQSHVTYRCVW 228
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy TrEMBL
Match: A0A0D2SP67_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1333002 PE=4 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 6.827e-130 Identity = 190/204 (93.14%), Postives = 192/204 (94.12%), Query Frame = -2 Query: 264 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRMLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFE 875 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRY+LSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKR LVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQ L A+ YY E Sbjct: 1 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYYLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRTLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQAAILTVGRALVEYYSCE 204
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy TrEMBL
Match: A0A0D2RMD1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1333002 PE=4 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 4.793e-128 Identity = 185/187 (98.93%), Postives = 186/187 (99.47%), Query Frame = -2 Query: 315 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRMLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQ 875 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRY+LSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKR LVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQ Sbjct: 1 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYYLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRTLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQ 187
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy TrEMBL
Match: A0A0D2Q0F3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1333002 PE=4 SV=1) HSP 1 Score: 375.555 bits (963), Expect = 1.200e-127 Identity = 185/188 (98.40%), Postives = 187/188 (99.47%), Query Frame = -2 Query: 312 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRMLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQL 875 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRY+LSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKR LVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQ+ Sbjct: 1 MEGIGLEGDGSNGEALGKCLSGLVDDGSTESHRYYLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRTLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQV 188
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy TrEMBL
Match: B9ST46_RICCO (DNA-directed RNA polymerase II, putative OS=Ricinus communis GN=RCOM_0248850 PE=4 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 1.510e-119 Identity = 165/217 (76.04%), Postives = 191/217 (88.02%), Query Frame = -2 Query: 192 NGEALGKCLSGLVDDGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRMLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW 842 N E LGKC S DDG+ E+HRY+LSRRTVLEMLRDRGY+VP++EIDLSL EFRAIHG +PD DRLK S TH +D SKRMLV+F GPG++KVS IR IAG I +K++LTGLIL++QN ITNQA+KA+DLF FKVE+FQITDLLVNITKHVLKP+H+VLT+ EKQ+LL+ Y IEEKQLPRLL+KDAIARYYG EKGQV+KVTY GEITESHVTYRCVW Sbjct: 22 NMEGLGKCFSSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPDIDRLKFSATHTSDPSKRMLVLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQAMKAVDLFKFKVEMFQITDLLVNITKHVLKPKHQVLTDREKQKLLKDYCIEEKQLPRLLRKDAIARYYGLEKGQVVKVTYSGEITESHVTYRCVW 238
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy TrEMBL
Match: A0A067K1X8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22486 PE=4 SV=1) HSP 1 Score: 353.984 bits (907), Expect = 9.206e-119 Identity = 168/225 (74.67%), Postives = 196/225 (87.11%), Query Frame = -2 Query: 192 GLEGDGS-NGEALGKCLSGLVDDGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRMLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW 863 G E +GS + ALG+CLS D+GS ES RY+LSRRTVLEML+DRGYA+P+ +I++SL EFRAIHGQ PD DRLK+S HK++ +KRMLV+F GPGVVKVS +R+IA I +K+ LTGLILI+QN ITNQALKA+DLF FKVE+FQITDLLVNITKHVLKP+H VLTE EKQ+LL+KYSIEEKQLPRLLKKDAIARYYG EKGQV+KVTY G+ITESHVTYRCVW Sbjct: 14 GAETNGSFDMGALGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDIDRLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQALKAMDLFKFKVEMFQITDLLVNITKHVLKPKHEVLTEREKQKLLKKYSIEEKQLPRLLKKDAIARYYGLEKGQVVKVTYSGDITESHVTYRCVW 238
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy TrEMBL
Match: B9IHS9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s03800g PE=4 SV=2) HSP 1 Score: 343.969 bits (881), Expect = 7.967e-115 Identity = 162/221 (73.30%), Postives = 196/221 (88.69%), Query Frame = -2 Query: 192 DGSNG-EALGKCLSGLVDDGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPDFDRLKLSVTHKTDSSKRMLVVFYGPGVVKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCVW 851 +GS G E+LG+CLS VD+GSTESHRY+LSRRTVLEML+DRGY+VP++EID+SL +FR ++GQ+PD + LK S THK+D SKRMLV+F G GVVKV IRLI IT +++LTGLIL++QN+ITNQA+KALDLF FK+EIFQITDLLVNITKH+LKP+H+VL+E KQRLL+KYSIEEKQLPRLLKKDAI+RYYG E+GQV+KVTY G+IT SHVTYRCVW Sbjct: 23 NGSFGMESLGRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIELLKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMKALDLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRLLKKDAISRYYGLERGQVVKVTYDGDITGSHVTYRCVW 243
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy Swiss-Prot
Match: RP5L1_ARATH (DNA-directed RNA polymerase subunit 5-like protein 1 OS=Arabidopsis thaliana GN=NRPB5L1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.944e-24 Identity = 67/205 (32.68%), Postives = 113/205 (55.12%), Query Frame = -2 Query: 201 DGSTESHRYFLSRRTVLEMLRDRGYAVPNTEIDLSLHEFRAIHGQSPD-FDRLKLSVT-HKTDSSKRMLVVFYGPGV-VKVSGIRLIAGLITSKETLTGLILIVQNHITNQALKALDLFS--FKVEIFQITDLLVNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYR 800 D E R F RRTVL+MLRDRGY + ++++L EF ++ + ++ L V+ +K + + VFY G V V I+ + + + I++V IT A A+ + +E+F+ +L+ NIT+H L ++ VL + K++LL Y++++ QLPR+L D +ARYYG ++GQV+K+ + + TYR Sbjct: 3 DMDDEITRIFKVRRTVLQMLRDRGYTIEESDLNLKREEFVQRFCKTMNKVNKEALFVSANKGPNPADKIYVFYPEGPKVGVPVIKKEVAIKMRDDKVHRGIVVVPMAITAPARMAVSELNKMLTIEVFEEAELVTNITEHKLVNKYYVLDDQAKKKLLNTYTVQDTQLPRILVTDPLARYYGLKRGQVVKIRRSDATSLDYYTYR 207
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy Swiss-Prot
Match: RPOH_PYRHO (DNA-directed RNA polymerase subunit H OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=rpoH PE=3 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 8.248e-9 Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = -2 Query: 243 NITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKV 410 NI KHVL P+HR+L+E EK+ LL+KY I QLP++ D + G + G +I++ Sbjct: 8 NIFKHVLVPEHRILSEEEKKALLEKYKITPAQLPQIRASDPAVKALGAKPGDIIEI 63
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy Swiss-Prot
Match: RPOH_PYRAB (DNA-directed RNA polymerase subunit H OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=rpoH PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.097e-8 Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = -2 Query: 243 NITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKV 410 NI KHVL P+HR+L+E EK+ LL+KY I QLP++ D + G + G +I++ Sbjct: 8 NIFKHVLVPEHRILSEEEKKALLEKYRITPAQLPQIKASDPAVKALGAKPGDIIEI 63
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy Swiss-Prot
Match: RPOH_METTH (DNA-directed RNA polymerase subunit H OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=rpoH PE=1 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 7.441e-8 Identity = 25/72 (34.72%), Postives = 41/72 (56.94%), Query Frame = -2 Query: 195 NITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCV 410 I KH L P+H +L E E +R+L++ +QLP++ D +A+ G ++G ++K+ E VTYR V Sbjct: 4 EILKHQLVPEHVILNESEAKRVLKELDAHPEQLPKIKTTDPVAKAIGAKRGDIVKIIRKSPTAEEFVTYRLV 75
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy Swiss-Prot
Match: RPOH_SULAC (DNA-directed RNA polymerase subunit H OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=rpoH PE=1 SV=2) HSP 1 Score: 51.9878 bits (123), Expect = 2.790e-7 Identity = 25/73 (34.25%), Postives = 42/73 (57.53%), Query Frame = -2 Query: 195 VNITKHVLKPQHRVLTEHEKQRLLQKYSIEEKQLPRLLKKDAIARYYGFEKGQVIKVTYGGEITESHVTYRCV 413 ++I+ H L P+H +L E +L+++ I+ +QLP + D +A+ G + G +IK+T T VTYR V Sbjct: 9 IDISNHELVPKHEILQLEEAYKLVKELGIKPEQLPWIRASDPVAKSIGAKPGDIIKITRKSPFTGESVTYRYV 81 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0021466 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0021466 ID=g.arboreum_cottongen_reftransV1_0021466; Name=g.arboreum_cottongen_reftransV1_0021466; organism=Gossypium arboreum; type=contig; length=960bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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