g.arboreum_cottongen_reftransV1_0016082, g.arboreum_cottongen_reftransV1_0016082 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: A0A0A0K3I6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G041930 PE=4 SV=1) HSP 1 Score: 437.187 bits (1123), Expect = 1.255e-146 Identity = 209/252 (82.94%), Postives = 229/252 (90.87%), Query Frame = 3 Query: 3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTN--EEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752 HLNLVRLIGYCVE SLFLVYE+IENGNLSQHLR RDPLPW +RVQI LDSARGLEYIHEHTVP+YIHRDIKSANILIDKNF KVADFGLTKLTE GN+SL TRLVGTFGYMPPEYAQYG+VSPK+DVYAFGVVLYELISA+EAVVKTN + ES GLVALFEDVLNQPD +++L KLVDPRL +NY D+VFKMA+LAKACT ENPQLRPSMR+IVVALMTLSS+T+DWDVGS YEN+AL++LMSGR Sbjct: 366 HLNLVRLIGYCVENSLFLVYEYIENGNLSQHLRGTGRDPLPWPSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHGKVADFGLTKLTEVGNSSLPTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAVVKTNRMSAINESKGLVALFEDVLNQPDAKENLYKLVDPRLEENYPLDSVFKMAQLAKACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVNLMSGR 617
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: W9RHE6_9ROSA (Proline-rich receptor-like protein kinase PERK8 OS=Morus notabilis GN=L484_014163 PE=3 SV=1) HSP 1 Score: 436.032 bits (1120), Expect = 2.428e-146 Identity = 210/255 (82.35%), Postives = 229/255 (89.80%), Query Frame = 3 Query: 3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRA----KVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVT-ESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752 HLNLVRLIGYCVEGSLFLVYE+IENGNL QHLR DP PW RVQI LDSARGLEYIHEHTVP+YIHRDIKSANILIDKNFR KVADFGLTKLTEYG+ SL TRLVGTFGYMPPEYAQYG+VSPKVDVYAFGVVLYELISA EAVVKTN VT ES GLVALFEDVL QPDPR+DL K+VDPRLG +Y ++V+KMA+LAKACTQE+PQLRPSMR+IVVALMTLSS+T+DWDVGSLY+N+AL++LMSGR Sbjct: 354 HLNLVRLIGYCVEGSLFLVYEYIENGNLGQHLRGSGMDPFPWPTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVVKKVADFGLTKLTEYGSNSLHTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAMEAVVKTNTSVTSESKGLVALFEDVLGQPDPREDLAKIVDPRLGKDYPVESVYKMAQLAKACTQESPQLRPSMRSIVVALMTLSSTTEDWDVGSLYDNQALVNLMSGR 608
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: G3KGB5_NICBE (Bti9 OS=Nicotiana benthamiana PE=2 SV=1) HSP 1 Score: 436.417 bits (1121), Expect = 2.942e-146 Identity = 203/250 (81.20%), Postives = 229/250 (91.60%), Query Frame = 3 Query: 3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752 HLNLVRLIGYCVEGSLFLVYE++ENGN+ QHLR RDPLPW +RVQI LDSARGLEYIHEHTVP+YIHRDIK+ANILIDKNF AKVADFGLTKLTE G++SLQTRLVGTFGYMPPEYAQYG+VSPKVDVYAFGVVLYELISA+EA+VK NE VTES GLV LFE+VLNQP+P +DL+K+VDPRLG++Y D+V KMA+LAKACT ENP +RPSMR+IVVALMTLSSST+DWDVGS Y N+ L++LMSGR Sbjct: 374 HLNLVRLIGYCVEGSLFLVYEYVENGNIGQHLRGTGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKTANILIDKNFHAKVADFGLTKLTEVGSSSLQTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKPNESVTESKGLVGLFEEVLNQPEPDEDLRKVVDPRLGNDYPLDSVRKMAQLAKACTHENPLIRPSMRSIVVALMTLSSSTEDWDVGSFYGNQGLINLMSGR 623
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: A0A0B0NAE1_GOSAR (Proline-rich receptor-like protein kinase PERK1 OS=Gossypium arboreum GN=F383_11779 PE=4 SV=1) HSP 1 Score: 437.573 bits (1124), Expect = 3.582e-146 Identity = 203/250 (81.20%), Postives = 227/250 (90.80%), Query Frame = 3 Query: 3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752 HLNLVRLIGYCVEGSLFLVYE+IENGNLSQHLR R+PLPW RVQI LDSARGLEYIHEHTVP+YIHRDIKSANILIDK FRAKVADFGLTKLTE GN+SL TRLVGTFGYMPPEYAQYG+VSPK+DV+AFGVVLYELISA+EA+VK N E+ GLVALFE L++PDP+ L KL+DPRLGDNY D+VFKMA+LAKACTQENPQLRPSMR+IVVALMTLSS+T+DWDVG+ YEN+A+++LMSGR Sbjct: 415 HLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGREPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKKFRAKVADFGLTKLTEVGNSSLPTRLVGTFGYMPPEYAQYGDVSPKIDVFAFGVVLYELISAKEAIVKANSSPAETKGLVALFEGGLDEPDPKAGLCKLIDPRLGDNYPLDSVFKMAQLAKACTQENPQLRPSMRSIVVALMTLSSTTEDWDVGTFYENQAVVNLMSGR 664
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: A0A072VFK5_MEDTR (LysM receptor kinase K1B OS=Medicago truncatula GN=MTR_2g024290 PE=4 SV=1) HSP 1 Score: 435.261 bits (1118), Expect = 6.250e-146 Identity = 203/250 (81.20%), Postives = 228/250 (91.20%), Query Frame = 3 Query: 3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752 HLNLVRLIGYCVEGSLFLVYE+IENGNLSQHLR +DPL W ARVQI LDSARGLEYIHEHTVP+YIHRD+KSANILIDKNFR KVADFGLTKLTEYG++SLQTRLVGTFGYMPPEYAQYGEVSPK+DVYAFGVVL+ELIS ++A+VKT+E ES GLVALFE+VL +P++DL KLVDPRLG+NY D+VFKM++LAKACT ENPQLRPSMR+IVVALMTLSS+ +DWDVGS YEN+AL+ LMSGR Sbjct: 367 HLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGTGKDPLSWPARVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLTEYGSSSLQTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLFELISGKQAIVKTDEAKNESKGLVALFEEVLGLSEPKEDLGKLVDPRLGENYPIDSVFKMSQLAKACTHENPQLRPSMRSIVVALMTLSSAAEDWDVGSFYENQALVHLMSGR 616
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: Y5102_ARATH (Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.708e-48 Identity = 98/232 (42.24%), Postives = 140/232 (60.34%), Query Frame = 3 Query: 3 HLNLVRLIGYCVEGS-LFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGN-TSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTD 692 H NLV+LIGYC E LVYEF+ G+L HL + PL W R+ I L +A+GL ++H P+ I+RD K++NIL+D ++ AK++DFGL K G+ T + TR++GT+GY PEY G ++ + DVY+FGVVL E+++ R++V KT ++ LV LN D R+ LQ ++DPRL + YS A K LA C +NP+ RP M +V L L + D Sbjct: 129 HPNLVKLIGYCCEDDHRLLVYEFMLRGSLENHLFRKTTAPLSWSRRMMIALGAAKGLAFLHNAERPV-IYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLEMLTGRKSVDKTRP--SKEQNLVDWARPKLN--DKRKLLQ-IIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCTGD 354
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 2.301e-48 Identity = 92/224 (41.07%), Postives = 139/224 (62.05%), Query Frame = 3 Query: 3 HLNLVRLIGYCVEGSL-FLVYEFIENGNLSQHLRWQ-DRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVAL 668 H NLV LIGYC E LVYE++ NG+L HL D PL WL R+QI D+A+GLEY+H P IHRD+KS+NIL+D N RAKV+DFGL++ TE T + + GT GY+ PEY +++ K DVY+FGVVL+EL+S ++ V + E+ + +V ++ + D+ ++DP + N ++V+++A +A C ++ RP M+ ++VA+ Sbjct: 659 HRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPV--SAEDFGPELNIVHWARSLIR----KGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAI 876
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.631e-48 Identity = 99/223 (44.39%), Postives = 137/223 (61.43%), Query Frame = 3 Query: 3 HLNLVRLIGYCVEGS-LFLVYEFIENGNLSQHLRWQD---RDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIV 659 H NLV+L G CVEG+ L LVYE++EN LS+ L +D R L W R +I L A+GL ++HE + +HRDIK++N+L+DK+ AK++DFGL KL + GNT + TR+ GT GYM PEYA G ++ K DVY+FGVV E++S + TN TE + + VL + R L +LVDP L +YS + M +A CT +P LRP+M +V Sbjct: 731 HPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKS---NTNFRPTEDFVYLLDWAYVLQE---RGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVV 947
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.584e-47 Identity = 97/235 (41.28%), Postives = 139/235 (59.15%), Query Frame = 3 Query: 3 HLNLVRLIGYCVEG-SLFLVYEFIENGNLSQHLR--WQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTS-LQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDD 695 H NLV LIGYC +G LVYEF+ G+L HL D++ L W R++I +A+GLE++H+ P I+RD KS+NIL+D+ F K++DFGL KL G+ S + TR++GT+GY PEYA G+++ K DVY+FGVV ELI+ R+A+ +E LVA + N R+ KL DPRL + A+++ +A C QE RP + +V AL L++ D Sbjct: 140 HPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAI--DSEMPHGEQNLVAWARPLFND---RRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSYLANQAYD 369
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: Y5158_ARATH (Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.683e-47 Identity = 90/227 (39.65%), Postives = 137/227 (60.35%), Query Frame = 3 Query: 3 HLNLVRLIGYCVEG-SLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTK-LTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTL 677 H NLV+L+GYC+E LVYEF+ G+L HL ++ PLPW R++I L +A+GL ++HE + I+RD K++NIL+D ++ AK++DFGL K + G T + TR++GT+GY PEY G ++ K DVY+FGVVL E+++ R ++ K G L E ++ +L+DPRL ++S K+ +LA C +P++RP M +V AL L Sbjct: 205 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPDEGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPN-----GEHNLVEWARPHLLDKRRFYRLLDPRLEGHFSIKGAQKVTQLAAQCLSRDPKIRPKMSDVVEALKPL 425 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0016082 ID=g.arboreum_cottongen_reftransV1_0016082; Name=g.arboreum_cottongen_reftransV1_0016082; organism=Gossypium arboreum; type=contig; length=845bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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