g.arboreum_cottongen_reftransV1_0016082, g.arboreum_cottongen_reftransV1_0016082 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0016082
Unique Nameg.arboreum_cottongen_reftransV1_0016082
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length845
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr12chromosomeg.arboreum_cottongen_reftransV1_0016082:1..845 .
Chr12:1516130..1517423 -		n/a
Homology
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: B9SH40_RICCO (Receptor protein kinase, putative OS=Ricinus communis GN=RCOM_1115620 PE=3 SV=1)

HSP 1 Score: 445.277 bits (1144), Expect = 5.519e-150
Identity = 210/250 (84.00%), Postives = 228/250 (91.20%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752
            HLNLVRLIGYCVEGSLFLVYE+IENGNLSQHL    RDPLPW  RVQI LDSARGLEYIHEHTVP+YIHRDIKSANILIDKNFR KVADFGLTKLTE G+ SL TRLVGTFGYMPPEYAQYG+VSPKVDVYA GVVLYELISA+EA++K N    ES GLVALFEDVLNQPDP++D++KLVDPRLGDNY  D+V KMA+LAKACTQENPQLRPSMR+IVVALMTLSSST+DWDVGS YEN+AL++LMSGR
Sbjct:  354 HLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLHGSGRDPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYALGVVLYELISAKEAIIKGNSSSAESRGLVALFEDVLNQPDPKEDVRKLVDPRLGDNYPLDSVRKMAQLAKACTQENPQLRPSMRSIVVALMTLSSSTEDWDVGSFYENQALVNLMSGR 603
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: W1PL12_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00028p00239040 PE=3 SV=1)

HSP 1 Score: 435.647 bits (1119), Expect = 1.599e-149
Identity = 208/251 (82.87%), Postives = 229/251 (91.24%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQD-RDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752
            HLNLVRLIG+C E  LFLVYEFIENGN+SQHLR  D R+PLPW AR+QI LDSARGLEYIHEHTVP+YIHRDIKSANILIDKNFR KVADFGLTKLTE G++SL TRLVGTFGYMPPEYAQ+G+VSPKVDVYAFGVVLYELISA+EAVVKT   VTES GLVALFE +LN+PD R+ L +LVDPRLGDNY  D V+KMA+LAKACTQENPQLRPSMR+IVVALMTLSSST+DWDVGSLYEN+AL++LMSGR
Sbjct:  123 HLNLVRLIGFCTETCLFLVYEFIENGNISQHLRGSDGREPLPWSARLQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTRLVGTFGYMPPEYAQFGDVSPKVDVYAFGVVLYELISAKEAVVKTGGSVTESKGLVALFESILNEPDAREKLYELVDPRLGDNYPLDPVYKMAQLAKACTQENPQLRPSMRSIVVALMTLSSSTEDWDVGSLYENQALVNLMSGR 373
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: M0ZJ41_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402000674 PE=3 SV=1)

HSP 1 Score: 432.565 bits (1111), Expect = 1.076e-148
Identity = 201/250 (80.40%), Postives = 228/250 (91.20%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752
            HLNLVRLIGYCVEGSLFLVYE++ENG++ QHLR   RDPLPW  RVQI LDSARGLEYIHEHTVP+YIHRDIK+ANILIDKNF AKVADFGLTKLTE G++SLQTRLVGTFGYMPPEYAQYG+VSPKVDVYAFGVVLYELISA+EA+VK N  VTES GLVALFE+VLNQP+P +DL++L+DPRLGD+Y  D+V KMA+LAKACT ENP +RPSMR+IVVALMTLSSST+DWDVGS Y N+ +++LMSGR
Sbjct:   91 HLNLVRLIGYCVEGSLFLVYEYVENGHIGQHLRGAGRDPLPWSKRVQIALDSARGLEYIHEHTVPVYIHRDIKTANILIDKNFHAKVADFGLTKLTEVGSSSLQTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKPNGSVTESKGLVALFEEVLNQPEPDEDLRQLIDPRLGDDYPLDSVRKMAQLAKACTHENPLIRPSMRSIVVALMTLSSSTEDWDVGSFYGNQGMINLMSGR 340
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: A0A0B0PXP3_GOSAR (Proline-rich receptor-like protein kinase PERK13 OS=Gossypium arboreum GN=F383_16135 PE=4 SV=1)

HSP 1 Score: 441.039 bits (1133), Expect = 2.826e-148
Identity = 206/250 (82.40%), Postives = 228/250 (91.20%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752
            HLNLVRLIGYCVEGSLFLVYE+IENGNLSQHLR   R+PLPW  RVQI LDSARGLEYIHEHTVP+YIHRDIKSANILIDK FRAKVADFGLTKLTE G+ SL TRLVGTFGYMPPEYAQYG+VSPK+DVYAFGVVLYELISA+EA+VK N  + ES GLVALFED L++PDP++ L +L+D RLGDNY  DAVFKMA+LAKACT+ENPQLRPSMR+IVVALMTLSSST+DWDVGS YEN+AL++LMSGR
Sbjct:  359 HLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSSREPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKKFRAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAIVKANGSLAESKGLVALFEDALDEPDPKKGLCRLIDGRLGDNYPLDAVFKMAQLAKACTKENPQLRPSMRSIVVALMTLSSSTEDWDVGSFYENQALVNLMSGR 608
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: V4W9Q1_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10017678mg PE=3 SV=1)

HSP 1 Score: 439.884 bits (1130), Expect = 3.308e-148
Identity = 208/250 (83.20%), Postives = 226/250 (90.40%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752
            HLNLVRLIGYCVEGSLFLVYE+IENGNL+QHLR   +D L W AR+QI LDSARGLEYIHEHTVP+YIHRDIK ANILIDKNFRAKVADFGL KLTE G+ S+ TRLVGTFGYMPPEYAQYGEVSPK+DVYAFGVVLYELISA EAVVKTNE +TES GLVALFE+VL QPDPR+DLQ+LVDPRLGD+Y  D+V KMARLA+ACTQENPQLRPSMR IVVALMTLSSST+DWD+GS YEN+ L  LMSGR
Sbjct:  333 HLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSTEDWDIGSFYENQGLDSLMSGR 582
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: A0A0D2SLN6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G171300 PE=4 SV=1)

HSP 1 Score: 439.884 bits (1130), Expect = 9.668e-148
Identity = 204/250 (81.60%), Postives = 228/250 (91.20%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752
            HLNLVRLIGYCVEGSLFLVYE+IENGNLSQHLR   R+PLPW  RVQI LDSARGLEYIHEHTVP+YIHRDIKSANILIDK FRAKVADFGLTKLTE GN+SL TRLVGTFGYMPPEYAQYG+VSPK+DV+AFGVVLYELISA+EA+VK N  + ES GLVALFED L++PDP+  L KL+DP LGDNY  D+VFKMA+LAKACTQENPQLRPSMR+IVVALMTLSS+T+DWDVG+ YEN+A+++LMSGR
Sbjct:  371 HLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGREPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKKFRAKVADFGLTKLTEVGNSSLPTRLVGTFGYMPPEYAQYGDVSPKIDVFAFGVVLYELISAKEAIVKANSSLAESKGLVALFEDGLDEPDPKAGLCKLIDPTLGDNYPLDSVFKMAQLAKACTQENPQLRPSMRSIVVALMTLSSTTEDWDVGTFYENQAVVNLMSGR 620
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: A0A059DE53_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01104 PE=3 SV=1)

HSP 1 Score: 439.113 bits (1128), Expect = 1.473e-147
Identity = 210/250 (84.00%), Postives = 231/250 (92.40%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752
            HLNLVRLIGYCVEGSLFLVYE+IENGNLS+HLR  D++PLPW  RVQI LDSARGLEYIHEHTVP+YIHRDIKSANILIDKNF  KVADFGLTKLTE G TS+ T LVGTFGYMPPEYA+YGEVSPKVDVYAFGVVLYELISA+EA+VK N  + ES GLVALFE+VL+QPDPR+DL+KLVDPRLGDNY FD+V+KMA+LAKACTQENPQLRPSMR+IVVALMTLSSST+DWDVGS YEN AL++LMSGR
Sbjct:  364 HLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRRSDKEPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHGKVADFGLTKLTEVG-TSIPTLLVGTFGYMPPEYARYGEVSPKVDVYAFGVVLYELISAKEAIVKANGSIAESRGLVALFEEVLDQPDPREDLRKLVDPRLGDNYPFDSVWKMAQLAKACTQENPQLRPSMRSIVVALMTLSSSTEDWDVGS-YENHALVNLMSGR 611
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: A0A0D2QMZ5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G096000 PE=4 SV=1)

HSP 1 Score: 439.113 bits (1128), Expect = 1.519e-147
Identity = 204/250 (81.60%), Postives = 228/250 (91.20%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752
            HLNLVRLIGYCVEGSLFLVYE+IENGNLSQHLR   R+PLPW  RVQI LDSARGLEYIHEHTVP+YIHRDIKSANILIDK FRAKVADFGLTKLTE G+ SL TRLVGTFGYMPPEYAQYG+VSPK+DVYAFGVVLYELISA+EA+VK N  + ES GLVALF+D L++PDP++ L +L+D RLGDNY  DAVFKMA+LAKACT+ENPQLRPSMR+IVVALMTLSSST+DWDVGS YEN+A+++LMSGR
Sbjct:  358 HLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSSREPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKKFRAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAIVKANGSLAESKGLVALFDDALDEPDPKEGLCRLIDARLGDNYPLDAVFKMAQLAKACTKENPQLRPSMRSIVVALMTLSSSTEDWDVGSFYENQAVVNLMSGR 607
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: V7BNY2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G146400g PE=3 SV=1)

HSP 1 Score: 439.113 bits (1128), Expect = 2.089e-147
Identity = 206/250 (82.40%), Postives = 231/250 (92.40%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752
            HLNLVRLIGYCVEGSLFLVYE+IENGNLSQHLR   RDPL W ARVQIGLD+ARGLEYIHEHTVP+YIHRDIKSANILIDKNFRAKVADFGLTKLTEYG++SL TRLVGTFGYMPPEYAQYG+VS KVDVYAFGVVLYELIS +EA+VKTN+  +ES GLVALFE+VL   DP+++L++LVDPRLGDNY  D+VFK+++LAKACT ENPQLRPSMR+IVVALMTLSS+T+DWDVGS YEN+AL+ LMSGR
Sbjct:  375 HLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGRDPLTWGARVQIGLDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGSSSLHTRLVGTFGYMPPEYAQYGDVSSKVDVYAFGVVLYELISGKEAIVKTNDPESESKGLVALFEEVLGLSDPKENLRQLVDPRLGDNYPLDSVFKVSQLAKACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVHLMSGR 624
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Match: B9HZA3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s01470g PE=3 SV=2)

HSP 1 Score: 437.573 bits (1124), Expect = 5.822e-147
Identity = 207/251 (82.47%), Postives = 230/251 (91.63%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRWQD-RDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDDWDVGSLYENKALMDLMSGR 752
            HLNLVRLIGYCVEGSLFLVYEFIENGNL QHLR    +DPLPW  RVQ+ LDSARGLEYIHEHTVP+YIHRD+KSANILIDKNFR KVADFGLT+LTE G+ SL TRLVGTFGYMPPEYAQYG+VS K+DVYAFGVVLYELISA+EAVVKTNE +TESMGLVALFE+VL QPDPR++L KLVD RLGD+Y  D+V KMA+LA+ACTQENP +RPSMR+IVVALMTLSSST+DWDVGSLYEN+A++DLMSGR
Sbjct:  357 HLNLVRLIGYCVEGSLFLVYEFIENGNLGQHLRSNSGKDPLPWSTRVQVALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTRLTEVGSASLHTRLVGTFGYMPPEYAQYGDVSSKIDVYAFGVVLYELISAKEAVVKTNEFITESMGLVALFEEVLGQPDPRENLPKLVDARLGDDYPLDSVCKMAQLARACTQENPHVRPSMRSIVVALMTLSSSTEDWDVGSLYENQAIVDLMSGR 607
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: PEK11_ARATH (Putative proline-rich receptor-like protein kinase PERK11 OS=Arabidopsis thaliana GN=PERK11 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 1.352e-51
Identity = 102/239 (42.68%), Postives = 146/239 (61.09%), Query Frame = 3 
Query:    3 HLNLVRLIGYCV-EGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMT---LSSSTDDWDVG 707
            H +LV L+GYC+ E   FL+YEF+ N  L  HL  ++   L W  RV+I + +A+GL Y+HE   P  IHRDIKS+NIL+D  F A+VADFGL +L +   + + TR++GTFGY+ PEYA  G+++ + DV++FGVVL ELI+ R+ V  +     ES  LV      L +   + D+ ++VDPRL ++Y    V+KM   A +C + +   RP M  +V AL T   LS  T+   VG
Sbjct:  423 HRHLVSLVGYCISEQHRFLIYEFVPNNTLDYHLHGKNLPVLEWSRRVRIAIGAAKGLAYLHEDCHPKIIHRDIKSSNILLDDEFEAQVADFGLARLNDTAQSHISTRVMGTFGYLAPEYASSGKLTDRSDVFSFGVVLLELITGRKPVDTSQPLGEES--LVEWARPRLIEAIEKGDISEVVDPRLENDYVESEVYKMIETAASCVRHSALKRPRMVQVVRALDTRDDLSDLTNGVKVG 659
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: TMK4_ARATH (Receptor-like kinase TMK4 OS=Arabidopsis thaliana GN=TMK4 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.775e-51
Identity = 104/230 (45.22%), Postives = 141/230 (61.30%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGS-LFLVYEFIENGNLSQHL-RWQD--RDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRL-GDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTL 677
            H +LV L+GYCV G+   LVYE++  GNL QHL  W +    PL W  RV I LD ARG+EY+H      +IHRD+K +NIL+  + RAKVADFGL K    G  S++TRL GTFGY+ PEYA  G V+ KVDVYAFGVVL E+++ R+A+  +  +  E   LV  F  +L     ++++ K +D  L  D  + ++++++A LA  CT   PQ RP M   V  L  L
Sbjct:  633 HRHLVALLGYCVNGNERLLVYEYMPQGNLGQHLFEWSELGYSPLTWKQRVSIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMEILTGRKALDDSLPD--ERSHLVTWFRRILIN---KENIPKALDQTLEADEETMESIYRVAELAGHCTAREPQQRPDMGHAVNVLGPL 857
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.590e-50
Identity = 95/239 (39.75%), Postives = 147/239 (61.51%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEG-SLFLVYEFIENGNLSQHLRW--QDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGN-TSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVA----LFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDD 695
            H NLV+LIG+C EG    LVYE++  G+L  HL      + PL W  R++I   +ARGLEY+H+   P  I+RD+K +NIL+ ++++ K++DFGL K+   G+ T + TR++GT+GY  P+YA  G+++ K D+Y+FGVVL ELI+ R+A+   N +  +   LV     LF+D       R++  K+VDP L   Y    +++   ++  C QE P +RP +  +V+AL  L+SS  D
Sbjct:  157 HPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAI--DNTKTRKDQNLVGWARPLFKD-------RRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLALNFLASSKYD 386
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: PERK2_ARATH (Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana GN=PERK2 PE=2 SV=3)

HSP 1 Score: 181.415 bits (459), Expect = 1.998e-50
Identity = 96/231 (41.56%), Postives = 136/231 (58.87%), Query Frame = 3 
Query:    3 HLNLVRLIGYCV-EGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTD 692
            H +LV L+GYC+ +    LVYEF+ N  L  HL  + R  + W +R++I + SA+GL Y+HE+  P  IHRDIK++NILID  F AKVADFGL K+    NT + TR++GTFGY+ PEYA  G+++ K DV++FGVVL ELI+ R  +   N     S  LV     +LNQ     + + +VD +L + Y  + + +M   A AC +     RP M  +   L    S +D
Sbjct:  407 HRHLVALVGYCIADAQRLLVYEFVPNNTLEFHLHGKGRPTMEWSSRLKIAVGSAKGLSYLHENCNPKIIHRDIKASNILIDFKFEAKVADFGLAKIASDTNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVVLLELITGRRPIDVNNVHADNS--LVDWARPLLNQVSELGNFEVVVDKKLNNEYDKEEMARMVACAAACVRSTAPRRPRMDQVARVLEGNISPSD 635
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: PERK9_ARATH (Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.305e-50
Identity = 95/228 (41.67%), Postives = 139/228 (60.96%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGSL-FLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSS 683
            H +LV ++G+C+ G    L+Y+++ N +L  HL  + +  L W  RV+I   +ARGL Y+HE   P  IHRDIKS+NIL++ NF A+V+DFGL +L    NT + TR++GTFGYM PEYA  G+++ K DV++FGVVL ELI+ R+ V  +     ES  LV     +++     ++   L DP+LG NY    +F+M   A AC +     RP M  IV A  +L++
Sbjct:  430 HRHLVSIVGHCISGDRRLLIYDYVSNNDLYFHLHGE-KSVLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLEDNFDARVSDFGLARLALDCNTHITTRVIGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDTSQPLGDES--LVEWARPLISHAIETEEFDSLADPKLGGNYVESEMFRMIEAAGACVRHLATKRPRMGQIVRAFESLAA 654
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: CDL1_ARATH (Serine/threonine-protein kinase CDL1 OS=Arabidopsis thaliana GN=CDL1 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.435e-50
Identity = 98/239 (41.00%), Postives = 143/239 (59.83%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEG-SLFLVYEFIENGNLSQHLR--WQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTS-LQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVA----LFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDD 695
            H NLV LIGYC +G    LVYE++  G+L  HL      + PL W  R++I   +A+GLEY+H+ T+P  I+RD+K +NIL+D ++  K++DFGL KL   G+ S + TR++GT+GY  PEYA  G+++ K DVY+FGVVL E+I+ R+A+   +   T    LVA    LF+D       R+   ++ DP L   Y    +++   +A  C QE P LRP +  +V AL  L+S   D
Sbjct:  127 HPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDISPGKQPLDWNTRMKIAAGAAKGLEYLHDKTMPPVIYRDLKCSNILLDDDYFPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAI--DSSRSTGEQNLVAWARPLFKD-------RRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQPNLRPLIADVVTALSYLASQKFD 356
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: TMK3_ARATH (Receptor-like kinase TMK3 OS=Arabidopsis thaliana GN=TMK3 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.046e-49
Identity = 99/231 (42.86%), Postives = 143/231 (61.90%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGS-LFLVYEFIENGNLSQHL-RWQD--RDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLG-DNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLS 680
            H +LV L+GYC++G+   LVYE++  G LSQHL  W++  R PL W  R+ I LD ARG+EY+H      +IHRD+K +NIL+  + RAKV+DFGL +L   G  S++TR+ GTFGY+ PEYA  G V+ KVD+++ GV+L ELI+ R+A+ +T  E  +S+ LV  F  V    D     +  +DP +  D+ +  ++ K+  LA  C    P  RP M  IV  L +L+
Sbjct:  640 HRHLVALLGYCLDGNERLLVYEYMPQGTLSQHLFHWKEEGRKPLDWTRRLAIALDVARGVEYLHTLAHQSFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPDGKYSIETRVAGTFGYLAPEYAVTGRVTTKVDIFSLGVILMELITGRKALDETQPE--DSVHLVTWFRRVAASKD-ENAFKNAIDPNISLDDDTVASIEKVWELAGHCCAREPYQRPDMAHIVNVLSSLT 867
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: PEK12_ARATH (Proline-rich receptor-like protein kinase PERK12 OS=Arabidopsis thaliana GN=PERK12 PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 5.244e-49
Identity = 98/231 (42.42%), Postives = 137/231 (59.31%), Query Frame = 3 
Query:    3 HLNLVRLIGYCV-EGSLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTD 692
            H +LV L+GYC+ +    L+YE++ N  L  HL  +    L W  RV+I + SA+GL Y+HE   P  IHRDIKSANIL+D  + A+VADFGL +L +   T + TR++GTFGY+ PEYA  G+++ + DV++FGVVL EL++ R+ V +T     ES  LV     +L +     DL +L+D RL   Y    VF+M   A AC + +   RP M  +V AL     S D
Sbjct:  424 HRHLVSLVGYCISDQHRLLIYEYVSNQTLEHHLHGKGLPVLEWSKRVRIAIGSAKGLAYLHEDCHPKIIHRDIKSANILLDDEYEAQVADFGLARLNDTTQTHVSTRVMGTFGYLAPEYASSGKLTDRSDVFSFGVVLLELVTGRKPVDQTQPLGEES--LVEWARPLLLKAIETGDLSELIDTRLEKRYVEHEVFRMIETAAACVRHSGPKRPRMVQVVRALDCDGDSGD 652
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: PEK15_ARATH (Proline-rich receptor-like protein kinase PERK15 OS=Arabidopsis thaliana GN=PERK15 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 9.424e-49
Identity = 90/223 (40.36%), Postives = 138/223 (61.88%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEGSL-FLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVAL 668
            H +LV L+GYC+ G+   LVYEF+ N  L  HL  ++R  + W  R++I L +A+GL Y+HE   P  IHRD+K+ANILID ++ AK+ADFGL + +   +T + TR++GTFGY+ PEYA  G+++ K DV++ GVVL ELI+ R  V K+ +   +   +V   + ++ Q     +   LVDPRL +++  + + +M   A A  + + + RP M  IV A 
Sbjct:  196 HRHLVSLLGYCITGAQRLLVYEFVPNKTLEFHLHEKERPVMEWSKRMKIALGAAKGLAYLHEDCNPKTIHRDVKAANILIDDSYEAKLADFGLARSSLDTDTHVSTRIMGTFGYLAPEYASSGKLTEKSDVFSIGVVLLELITGRRPVDKS-QPFADDDSIVDWAKPLMIQALNDGNFDGLVDPRLENDFDINEMTRMVACAAASVRHSAKRRPKMSQIVRAF 417
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Match: ALE2_ARATH (Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.184e-48
Identity = 95/232 (40.95%), Postives = 140/232 (60.34%), Query Frame = 3 
Query:    3 HLNLVRLIGYCVEG-SLFLVYEFIENGNLSQHLRWQDRDPLPWLARVQIGLDSARGLEYIHEHTVPLYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGNTSLQTRLVGTFGYMPPEYAQYGEVSPKVDVYAFGVVLYELISAREAVVKTNEEVTESMGLVALFEDVLNQPDPRQDLQKLVDPRLGDNYSFDAVFKMARLAKACTQENPQLRPSMRTIVVALMTLSSSTDD 695
            H NLV+LIG C+EG +  L+YE + NG++  HL     D   W AR++I L +ARGL Y+HE + P  IHRD K++N+L++ +F  KV+DFGL +    G+  + TR++GTFGY+ PEYA  G +  K DVY++GVVL EL++ R  V  +     E+  LV     +L     R+ L++LVDP L   Y+FD + K+A +A  C  +    RP M  +V AL  + +  D+
Sbjct:  402 HRNLVKLIGICIEGRTRCLIYELVHNGSVESHLHEGTLD---WDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPSGEEN--LVTWARPLLAN---REGLEQLVDPALAGTYNFDDMAKVAAIASMCVHQEVSHRPFMGEVVQALKLIYNDADE 625
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9SH40_RICCO5.519e-15084.00Receptor protein kinase, putative OS=Ricinus commu... [more]
W1PL12_AMBTC1.599e-14982.87Uncharacterized protein OS=Amborella trichopoda GN... [more]
M0ZJ41_SOLTU1.076e-14880.40Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
A0A0B0PXP3_GOSAR2.826e-14882.40Proline-rich receptor-like protein kinase PERK13 O... [more]
V4W9Q1_9ROSI3.308e-14883.20Uncharacterized protein (Fragment) OS=Citrus cleme... [more]
A0A0D2SLN6_GOSRA9.668e-14881.60Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A059DE53_EUCGR1.473e-14784.00Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A0D2QMZ5_GOSRA1.519e-14781.60Uncharacterized protein OS=Gossypium raimondii GN=... [more]
V7BNY2_PHAVU2.089e-14782.40Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
B9HZA3_POPTR5.822e-14782.47Uncharacterized protein OS=Populus trichocarpa GN=... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0016082 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
PEK11_ARATH1.352e-5142.68Putative proline-rich receptor-like protein kinase... [more]
TMK4_ARATH6.775e-5145.22Receptor-like kinase TMK4 OS=Arabidopsis thaliana ... [more]
RLCK7_ARATH1.590e-5039.75Probable serine/threonine-protein kinase RLCKVII O... [more]
PERK2_ARATH1.998e-5041.56Proline-rich receptor-like protein kinase PERK2 OS... [more]
PERK9_ARATH2.305e-5041.67Proline-rich receptor-like protein kinase PERK9 OS... [more]
CDL1_ARATH8.435e-5041.00Serine/threonine-protein kinase CDL1 OS=Arabidopsi... [more]
TMK3_ARATH2.046e-4942.86Receptor-like kinase TMK3 OS=Arabidopsis thaliana ... [more]
PEK12_ARATH5.244e-4942.42Proline-rich receptor-like protein kinase PERK12 O... [more]
PEK15_ARATH9.424e-4940.36Proline-rich receptor-like protein kinase PERK15 O... [more]
ALE2_ARATH1.184e-4840.95Receptor-like serine/threonine-protein kinase ALE2... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000719Protein kinase domainSMARTSM00220serkin_6coord: 2..223
e-value: 1.0E-10
score: 18.8
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 1..224
score: 29.248
NoneNo IPR availableGENE3D1.10.510.10coord: 30..220
e-value: 4.1E-42
score: 143.4
NoneNo IPR availableGENE3D3.30.200.20coord: 2..29
e-value: 3.7E-4
score: 19.7
NoneNo IPR availablePIRSFPIRSF000654ILKcoord: 1..236
e-value: 5.9E-29
score: 98.6
NoneNo IPR availablePANTHERPTHR27001:SF12CHITIN ELICITOR RECEPTOR KINASE 1coord: 1..249
NoneNo IPR availablePANTHERPTHR27001FAMILY NOT NAMEDcoord: 1..249
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domainPFAMPF07714Pkinase_Tyrcoord: 2..220
e-value: 6.3E-34
score: 117.3
IPR008271Serine/threonine-protein kinase, active sitePROSITEPS00108PROTEIN_KINASE_STcoord: 66..78
IPR011009Protein kinase-like domainSUPERFAMILY56112Protein kinase-like (PK-like)coord: 2..227

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0016082 ID=g.arboreum_cottongen_reftransV1_0016082; Name=g.arboreum_cottongen_reftransV1_0016082; organism=Gossypium arboreum; type=contig; length=845bp
ATCATTTGAACCTGGTTCGTTTAATTGGATATTGTGTCGAAGGTTCCTTA
TTCTTAGTCTACGAGTTCATCGAGAACGGTAATTTAAGCCAACATTTACG
CTGGCAAGATAGAGATCCGTTGCCATGGTTAGCAAGGGTGCAAATCGGTT
TAGACTCGGCCAGAGGACTCGAATACATCCATGAACATACTGTCCCTCTC
TACATTCATCGTGATATAAAATCGGCAAATATTTTAATCGACAAGAACTT
TCGAGCTAAGGTGGCTGATTTTGGGTTGACGAAACTAACTGAATACGGAA
ACACTTCGTTGCAAACACGTCTCGTTGGTACTTTCGGATACATGCCACCA
GAATATGCTCAATATGGTGAGGTTTCCCCTAAGGTTGATGTGTATGCTTT
TGGAGTTGTTCTCTACGAACTGATATCCGCCAGGGAAGCTGTCGTCAAGA
CGAACGAAGAAGTAACTGAATCAATGGGACTCGTCGCATTGTTCGAAGAT
GTTCTAAACCAACCCGATCCAAGACAAGATCTGCAAAAACTAGTTGACCC
CAGACTCGGCGATAACTACTCTTTTGATGCCGTCTTCAAGATGGCACGTC
TCGCCAAGGCTTGTACGCAAGAAAATCCTCAGCTGAGACCGAGCATGAGA
ACTATTGTCGTCGCACTTATGACACTGTCGTCTTCAACCGATGATTGGGA
TGTTGGCTCGTTATACGAAAATAAAGCTCTAATGGACCTCATGTCGGGAA
GGTAGCTTAGCCAGAGTCATTAAAGGGGTTAATCAATGAATAGGCTGTGA
ATACTTTAAATTTTAATAGGCTATGTACAGTTTCTTTCACCAAGT
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR001245Ser-Thr/Tyr_kinase_cat_dom
IPR008271Ser/Thr_kinase_AS
IPR011009Kinase-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation