g.arboreum_cottongen_reftransV1_0001670, g.arboreum_cottongen_reftransV1_0001670 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0001670
Unique Nameg.arboreum_cottongen_reftransV1_0001670
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1129
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr7chromosomeg.arboreum_cottongen_reftransV1_0001670:1..1129 .
Chr7:14098541..14100197 +
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy TrEMBL
Match: V7C6Z8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G080000g PE=4 SV=1)

HSP 1 Score: 423.32 bits (1087), Expect = 4.829e-142
Identity = 200/296 (67.57%), Postives = 237/296 (80.07%), Query Frame = -1 
Query:  194 RGIKASNKAVQIEGSNS---GSIKASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYFCIQLSKFPVKSFRREPFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKPNVIFGGDMNWDDKLDGQFPLTDGWIDAWNELRPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCAVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTISSQ 1072
            + +K  NKA++  G  +   G   ++ KILSYNVWFREDLE+HKRM+AIGDL+QLHSP+ ICFQEVTP IYDIF+ S WW  YRCS+S + A  R YFC+ LSK PVKSFR  PF NS+MGRELC  EVE + G++ LV+AT+HLESPCPAPPKWDQM+SKERV QA  A+N+L  +PNVIFGGDMNWDDK DGQ+PL DGW DAW +L+P E GWTYDTK+NQML+ NRTL+KRLDRF+C L  FK+ +V+MIG+E IPGLSY KEK VR   K L LPVLPSDHYGLLLTISS+
Sbjct:  150 KKVKPFNKAIRTSGEENVELGKACSTFKILSYNVWFREDLELHKRMEAIGDLVQLHSPNFICFQEVTPNIYDIFKQSTWWSVYRCSVSSEMAYSRPYFCMVLSKLPVKSFRNIPFSNSVMGRELCTAEVEAASGKS-LVIATSHLESPCPAPPKWDQMFSKERVVQANEAVNLLNEQPNVIFGGDMNWDDKGDGQYPLQDGWTDAWAQLKPNESGWTYDTKANQMLTGNRTLQKRLDRFICHLTDFKITSVDMIGMEVIPGLSYNKEKKVRNGIKQLVLPVLPSDHYGLLLTISSK 444
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy TrEMBL
Match: E5GC61_CUCME (Endonuclease/exonuclease/phosphatase family protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 422.165 bits (1084), Expect = 4.229e-141
Identity = 209/301 (69.44%), Postives = 244/301 (81.06%), Query Frame = -1 
Query:  197 DCIELGGFRGIKASNKAV-QIEGSNSGSIKASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYFCIQLSKFPVKSFRREPFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKPNVIFGGDMNWDDKLDGQFPLTDGWIDAWNELRPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCAVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTISS 1096
            D  EL  F+G KAS  AV ++ GS+S +    +KI++YNVWFREDLE+  RM+A+G LIQ HSPD+ICFQEVTP IYDIF+ +NWWK YRCS+  D+ S R YFC+ LSK PVKSF  +PF NSIMGRELC+  +E+  G  +L VAT+HLESPCPAPPKW+QMYSKERV QAK A++ L+  PNVIFGGDMNWDDKLDGQFP  DGWIDAW ELRP E+GWTYDTKSN+MLS NRTL+KRLDRF+CKL  FKV ++EMIG + IPGL+YTKEK V KE K LELPVLPSDHYGLLLTISS
Sbjct:  182 DFAELSAFQGTKASMNAVAEMGGSSSRANLKPVKIMTYNVWFREDLELRNRMRALGQLIQRHSPDVICFQEVTPAIYDIFQITNWWKVYRCSVIKDSHS-RGYFCMLLSKLPVKSFSCQPFPNSIMGRELCIGNLEVQNG-ISLTVATSHLESPCPAPPKWNQMYSKERVVQAKQAVDFLKETPNVIFGGDMNWDDKLDGQFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKRLDRFICKLQDFKVNSIEMIGTDSIPGLTYTKEKKVGKEMKTLELPVLPSDHYGLLLTISS 480
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy TrEMBL
Match: V4UKW6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014440mg PE=3 SV=1)

HSP 1 Score: 429.483 bits (1103), Expect = 5.889e-141
Identity = 205/281 (72.95%), Postives = 233/281 (82.92%), Query Frame = -1 
Query:  194 EGSNSGSIKASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYFCIQLSKFPVKSFRREPFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKPNVIFGGDMNWDDKLDGQFPLTDGWIDAWNELRPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCAVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTISSQ 1036
            + S SG++  SLKILSYNVWFREDLE+H RMK IGDLIQLHSPDIICFQE+TP IYDI   S+WWKGYRCS+ ++ A  R YFC+QLSK PVKSF  EPF NSIMGRELC+ EVE+   +  LVVAT+HLESPCP PP WDQM+SKERVEQAK AIN+L+  PNVIF GDMNWDDKLD +FPL DGW+DAW ELRP E+GWTYDTKSN+MLS NRTL+KRLDRF+C L  FK+  ++MIGVE IPGL Y KEK VRKE + LELPVLPSDHYGLLLTIS+ 
Sbjct:  430 DNSESGAVSGSLKILSYNVWFREDLEMHPRMKTIGDLIQLHSPDIICFQEITPNIYDILCKSSWWKGYRCSVPNEMADSRGYFCMQLSKLPVKSFTCEPFKNSIMGRELCVAEVEVQE-KKPLVVATSHLESPCPGPPTWDQMFSKERVEQAKEAINLLKKNPNVIFCGDMNWDDKLDSKFPLPDGWVDAWTELRPGENGWTYDTKSNKMLSGNRTLQKRLDRFICSLRDFKIVRIDMIGVEAIPGLLYVKEKKVRKEMQKLELPVLPSDHYGLLLTISNN 709
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy TrEMBL
Match: A0A067JML7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21205 PE=4 SV=1)

HSP 1 Score: 418.313 bits (1074), Expect = 2.890e-140
Identity = 209/306 (68.30%), Postives = 248/306 (81.05%), Query Frame = -1 
Query:  194 GNEDCIELGGFRGIKASNKAVQI--EGSNSGSIKASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYFCIQLSKFPVKSFRREPFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKPNVIFGGDMNWDDKLDGQFPLTDGWIDAWNELRPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCAVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTISSQ 1105
             +ED ++LGGF+G  ASNKAV +    ++S ++ +S KILSYNVWFREDLE+ KRMKA+GDLIQLHSPD+ICFQEVT  IY IFR S+WW+GY CS+ ++ A  R YFC+QLSK PVKSF   PF+NSIMGRELC+ E+E+      LVVAT+HLESPCPAPP WDQM+SKERV QAK AIN+L+  PNVIF GDMNWDDKLDGQFPL DGW+DAW EL+P  +GWTYDT+SNQMLS NR L+KRLDRF+C L  FK+  ++MIG + IPGLS+ KEK VRKE K LELPVLPSDHYGLLLTIS +
Sbjct:  132 ADEDRVKLGGFQGFGASNKAVTVVKRDTSSPAVLSSFKILSYNVWFREDLELDKRMKALGDLIQLHSPDVICFQEVTSSIYHIFRQSSWWRGYHCSVKNEMAIQRPYFCMQLSKLPVKSFSCRPFNNSIMGRELCIAELEVQPN-NPLVVATSHLESPCPAPPTWDQMFSKERVYQAKEAINLLKTNPNVIFAGDMNWDDKLDGQFPLPDGWVDAWTELKPGCNGWTYDTRSNQMLSGNRMLQKRLDRFICNLRDFKLSEIDMIGKDAIPGLSHVKEKKVRKEVKKLELPVLPSDHYGLLLTISGR 436
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy TrEMBL
Match: A0A059CFI9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01342 PE=4 SV=1)

HSP 1 Score: 412.149 bits (1058), Expect = 4.059e-138
Identity = 201/303 (66.34%), Postives = 241/303 (79.54%), Query Frame = -1 
Query:  194 EDCIELGGFRGIKASNKAVQI-EGSNSGSIKASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYFCIQLSKFPVKSFRREPFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKPNVIFGGDMNWDDKLDGQFPLTDGWIDAWNELRPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCAVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTISSQ 1099
            ED +E+G   G +  ++ V   E   S +  +S KILSYNVWFREDLE+HKR+KAIG+ +Q+HSP +ICFQEVTP IYDIF+ S+WWK Y CS+S D A+LR YFC+ LSK PV+SF  +PF NS+MGRELC+ EVE+ G +  LV+AT+HLESPCP PPKWDQMYSKERV QAK A++ L   PNVI GGDMNWDDKLDG+FPL D W+DAW ELRP+E+GWTYDTKSN MLSANRTL+KRLDRFLC L+ FK+  ++MIG E IPGL+Y KEK VRKE   L LPVLPSDH+GLLLTI S+
Sbjct:  116 EDRVEVGRIGGAEDGSERVDAKEDGKSSAAPSSWKILSYNVWFREDLEMHKRIKAIGEFVQIHSPHVICFQEVTPDIYDIFQLSSWWKLYHCSVSSDAANLRPYFCMMLSKLPVRSFICKPFGNSVMGRELCIVEVEVEG-KKPLVIATSHLESPCPGPPKWDQMYSKERVVQAKEAMDHLSKYPNVILGGDMNWDDKLDGRFPLRDEWVDAWEELRPSENGWTYDTKSNPMLSANRTLQKRLDRFLCSLHDFKITGIDMIGREAIPGLTYCKEKKVRKELTNLVLPVLPSDHFGLLLTIGSK 417
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy TrEMBL
Match: A0A0A0LRJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062360 PE=4 SV=1)

HSP 1 Score: 411.379 bits (1056), Expect = 8.767e-138
Identity = 204/298 (68.46%), Postives = 240/298 (80.54%), Query Frame = -1 
Query:  197 ELGGFRGIKASNKAVQIEG-SNSGSIKASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYFCIQLSKFPVKSFRREPFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKPNVIFGGDMNWDDKLDGQFPLTDGWIDAWNELRPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCAVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTISS 1087
            EL  FRG KAS  AV   G S+S +   ++KI++YNVWFREDLE+  RM+A+G LIQ HSPD+ICFQEVTP IYDIF+ +NWWK YRCS+  D+ S   YFC+ LSK PVKSF  +PF NSIMGRELC+  +E+  G  +L VAT+HLESPCPAPP W+QM+SKERV QAK ++  L+  PNVIFGGDMNWDDKLDG+FP  DGWIDAW ELRP E+GWTYDTKSN+MLS NRTL+KRLDRF+CKL  FKV ++EMIG + IPGLSYTKEK V K++K LELPVLPSDHYGLLLTISS
Sbjct:  119 ELSTFRGTKASMNAVAEMGDSSSRACLKTVKIMTYNVWFREDLELRNRMRALGQLIQRHSPDVICFQEVTPDIYDIFQITNWWKVYRCSVIKDSHS-SGYFCMLLSKLPVKSFSCQPFPNSIMGRELCIGNLEVQKG-ISLTVATSHLESPCPAPPTWNQMFSKERVVQAKQSVGFLKETPNVIFGGDMNWDDKLDGRFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKRLDRFICKLQDFKVNSIEMIGTDSIPGLSYTKEKKVGKDRKTLELPVLPSDHYGLLLTISS 414
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy TrEMBL
Match: G7JJ90_MEDTR (Endonuclease/exonuclease/phosphatase family protein OS=Medicago truncatula GN=MTR_4g132300 PE=4 SV=1)

HSP 1 Score: 407.912 bits (1047), Expect = 4.795e-136
Identity = 195/285 (68.42%), Postives = 231/285 (81.05%), Query Frame = -1 
Query:  194 AVQIEGSNSGSIKASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYFCIQLSKFPVKSFRREPFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKPNVIFGGDMNWDDKLDGQFPLTDGWIDAWNELRPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCAVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTISSQ 1048
            A  +E  +SG   +SLKILSYNVWFREDLE+ KRMKAIGDL+ +HSPD ICFQEVT  IYDIF+ S WW  Y CS+S + A  +AY+C+ LSK PVKSF  + F NSIMGRELC+ EVE  GG++  VVAT+HLESPCPAPPKWDQM+SKERVEQA  A+NIL+  PNV+FGGDMNWDDK DGQ+PL DGW+DAW+ LRP E GWTYDTKSNQML+ NRTL+KRLDRF+C+L  FK+  ++MIG++ IPG+SY KEK VR E K L  PVLPSDHYGLLLT+SS+
Sbjct:  154 AKPLERVDSGKGVSSLKILSYNVWFREDLELEKRMKAIGDLVLMHSPDFICFQEVTRDIYDIFKLSTWWNVYHCSVSSEKAYSKAYYCMLLSKLPVKSFSAKSFSNSIMGRELCIAEVEDVGGKS-FVVATSHLESPCPAPPKWDQMFSKERVEQANEALNILKRHPNVVFGGDMNWDDKKDGQYPLQDGWLDAWSVLRPNEAGWTYDTKSNQMLTGNRTLQKRLDRFVCRLRDFKISNIDMIGMDEIPGVSYNKEKKVRGEIKQLVCPVLPSDHYGLLLTLSSK 437
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy TrEMBL
Match: M5WJQ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006713mg PE=4 SV=1)

HSP 1 Score: 405.986 bits (1042), Expect = 6.918e-136
Identity = 203/287 (70.73%), Postives = 229/287 (79.79%), Query Frame = -1 
Query:  194 VQIEGSNSGSIK---ASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYFCIQLSKFPVKSFRREPFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKPNVIFGGDMNWDDKLDGQFPLTDGWIDAWNELRPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCAVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTISSQ 1045
            V  EG++ GS      +LKILSYNVWFREDLEVHKRMKA+GDLIQ H PD+ICFQEVTP IYDIFR S+WWK Y+ S+S+  A  R YFC+QLSK  VKSF  +PF  S MGRELC+ EVE+ G +  LVVAT+HLESPCP PP WDQMYSKERV+QAK A+N+L    NVIF GDMNWDDKLDGQFPL + WIDAW ELRP E+GWTYDTKSN MLS NR L+KRLDRFLC L+ F+V  +EMIG++ IPGLSY KEK VR E K LELPVLPSDHYGLLLTI SQ
Sbjct:  114 VNQEGTSFGSSGVGLTTLKILSYNVWFREDLEVHKRMKALGDLIQQHCPDLICFQEVTPNIYDIFRQSSWWKMYQSSVSNQMADSRPYFCMQLSKLRVKSFSCKPFGYSAMGRELCVAEVEVPG-DKHLVVATSHLESPCPGPPNWDQMYSKERVDQAKEALNLLNKNQNVIFCGDMNWDDKLDGQFPLPNKWIDAWEELRPEENGWTYDTKSNMMLSGNRKLQKRLDRFLCSLHDFRVSKIEMIGMDAIPGLSYIKEKKVRTEIKKLELPVLPSDHYGLLLTICSQ 399
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy TrEMBL
Match: C6TAL8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 404.831 bits (1039), Expect = 1.490e-135
Identity = 189/281 (67.26%), Postives = 229/281 (81.49%), Query Frame = -1 
Query:  224 IKASNKAVQIEGSNSGSIKASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYFCIQLSKFPVKSFRREPFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKPNVIFGGDMNWDDKLDGQFPLTDGWIDAWNELRPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCAVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDH 1066
            +K S+KA  I G  +     + KILSYNVWFREDLE+HKRMKAIGDL+Q HSPD ICFQEVTP IYDIF+ S WW GYRCS+S +    R YFC+ LSK PVKSF ++PF NSIMGRELC+ EVE + G T+LV+AT+HLESP P PPKWDQM+SKERV QA  AIN+L+ +PNV+FGGDMNW+D LDGQ+PL DGW+DAW++LRP ++GWTYDTK+NQML+ NRT++KRLDRF+C+L  FK+  V+MIG+E IPG+SY KEK VRKE K L LP+LPSDH
Sbjct:  114 VKPSDKATDITGDENIDSGKAFKILSYNVWFREDLELHKRMKAIGDLVQFHSPDFICFQEVTPNIYDIFKRSTWWSGYRCSVSSEMDYSRPYFCMVLSKLPVKSFSKKPFSNSIMGRELCIAEVEAARG-TSLVIATSHLESPSPGPPKWDQMFSKERVVQANEAINLLKKQPNVVFGGDMNWNDNLDGQYPLQDGWVDAWSQLRPNKNGWTYDTKANQMLTGNRTVQKRLDRFICRLTDFKITGVDMIGMEAIPGVSYNKEKKVRKEIKQLVLPILPSDH 393
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy TrEMBL
Match: W9R361_9ROSA (Tyrosyl-DNA phosphodiesterase 2 OS=Morus notabilis GN=L484_018044 PE=4 SV=1)

HSP 1 Score: 404.445 bits (1038), Expect = 6.548e-135
Identity = 210/319 (65.83%), Postives = 246/319 (77.12%), Query Frame = -1 
Query:  194 KIREPNLGNEDCIELGGFRGIK--ASNKAVQIEGS----NSGSIKA--SLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYFCIQLSKFPVKSFRREPFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKPNVIFGGDMNWDDKLDGQFPLTDGWIDAWNELRPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCAVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTISSQ 1126
            K   P+LG       GGF+ +K  AS+K   + G      SGS K    LKILSYNVWFREDLE+ KRMKA+GDLI+LHSP++ICFQEVTP IY IF+ S+WW+ Y CS+    A  R YFC+QLSK PVKSF   PF NSIMGRELC+ E+E+  G+  L+VAT+HLESPCP PP WDQM+SKERVEQA  A++ L+   NV+FGGDMNWDDKLDGQFPL DGW DAW  LRP E+GWTYDTKSNQMLSANRTL+KRLDRF+CKL+ FK+  +EMIG++ IPGLSY KEK V+KE K LELPVLPSDHYGLLLTI S+
Sbjct:  115 KPSSPDLG-------GGFQAVKLKASDKPATVSGGLELEESGSAKGLNKLKILSYNVWFREDLELQKRMKALGDLIELHSPEVICFQEVTPNIYKIFQQSSWWRAYDCSVPMQMALSRPYFCMQLSKLPVKSFSCRPFGNSIMGRELCVAEIEVQKGKP-LLVATSHLESPCPGPPTWDQMFSKERVEQATEALSFLKKNQNVVFGGDMNWDDKLDGQFPLPDGWSDAWANLRPGENGWTYDTKSNQMLSANRTLQKRLDRFVCKLHEFKISGIEMIGMDAIPGLSYIKEKKVKKEIKNLELPVLPSDHYGLLLTICSE 425
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy Swiss-Prot
Match: TYDP2_XENTR (Tyrosyl-DNA phosphodiesterase 2 OS=Xenopus tropicalis GN=tdp2 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.113e-18
Identity = 86/310 (27.74%), Postives = 144/310 (46.45%), Query Frame = -1 
Query:  212 GNEDCIELGGFRGIKASNKAVQIEGSNSGSIK----ASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYF-CIQLSKFPVKSFRRE--PFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKP---NVIFGGDMNWDDKLDGQF-PLTDGWIDAWNEL-RPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCAVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLL 1105
             ++ CI+L G   +   ++A     SNS ++K    +    L++N+   ++  V +R + +   + L+SPD++  QEV P  Y+      + K    S +  T +   YF  + L K  VK   +E  P+ +++M R L +  V +SG    L+  T+HLES         + +SKER++Q  + +  + + P    VIFGGD N  D+   +   + +  +D W+ L +P    +T+DTK N+ L A    R R DR   +            G + IP   Y          + L+    PSDH+GLL
Sbjct:   90 ASDSCIDLTGDDLVVTKSEATT---SNSSTVKQEDESHFSFLTWNIDGLDESNVAERARGVCSYLALYSPDVVFLQEVIPPYYE------YLKKRAVSYTIITGNEDEYFTAMMLKKSRVKLISQEIVPYPSTVMMRNLLVANVNISGNSICLM--TSHLEST--------KDHSKERLKQLDIVLKKMMDAPPLATVIFGGDTNLRDQEVAKIGGMPNNILDVWDFLGKPEHCRYTWDTKVNKNLRAPYICRLRFDRIFFR--------ASQEGSQVIPQSLYL------AGTEKLDCGRFPSDHWGLL 366
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy Swiss-Prot
Match: TYDP2_XENLA (Tyrosyl-DNA phosphodiesterase 2 OS=Xenopus laevis GN=tdp2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.487e-17
Identity = 87/316 (27.53%), Postives = 145/316 (45.89%), Query Frame = -1 
Query:  212 LGNEDCIELGGFRGIKASNKAVQIEGSNSGSIK-----ASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYF-CIQLSKFPVKSFRRE--PFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKP---NVIFGGDMNWDDKLDGQF-PLTDGWIDAWNEL-RPAEDGWTYDTKSNQMLSANRTLRKRLDRFL--CKLNGFKVCA--VEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLL 1108
            + ++ CI+L     +   ++AV    SNS ++K     +    L++N+   ++  V +R +A+   + L++PD++  QEV P   +      + K    S    T +   YF  + L K  VK   +E  P+ +++M R L +  V +SG    L+  T+HLES         + +SKER++Q    +  + + P    VIFGGD N  D+   +   L +  +D W  L +P    +T+DTK N  L A  T R R DR L    + G +V    + ++G E +    +                  PSDH+GLL
Sbjct:   86 VTSDACIDLTSDDLVATKSEAVT---SNSSTVKQQEDESHFTFLTWNIDGLDESNVAERARAVCSCLALYTPDVVFLQEVIPPYCE------YLKKRAVSYKIITGNEDEYFTAMMLKKSRVKLISQEIVPYPSTLMMRNLLVANVNISGNSICLM--TSHLEST--------KDHSKERLKQLDTVLKKMMDAPPSATVIFGGDTNLRDQEVAKIGGLPNTILDVWEFLGKPEHCRYTWDTKLNNNLRACYTSRLRFDRILYRASMEGSQVIPQFLNLVGTEKLDCGRF------------------PSDHWGLL 364
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy Swiss-Prot
Match: TYDP2_MOUSE (Tyrosyl-DNA phosphodiesterase 2 OS=Mus musculus GN=Tdp2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.952e-17
Identity = 85/302 (28.15%), Postives = 132/302 (43.71%), Query Frame = -1 
Query:  200 SNKAVQIEGSNSGSIKASLKILSYNVWFREDLE---VHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYF-CIQLSKFPVKSFRRE--PFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKPN---VIFGGDMNWDD----KLDGQFPLTDGWIDAWNEL-RPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVC--AVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTIS 1057
            +N    +E S SG+       +S+  W  + L+   + +R + +   + L+SPD++  QEV P          + K    S +  T +   YF  I L K  VK   +E  PF N+ M R L    V L G E  L+  T+HLES         + +S ER+ Q K  +  ++  P+   VIF GD N  D    K  G   L D   DAW  L +P    +T+DTK+N  L      + R DR   +     +   +++++G+E +    +                  PSDH+GLL T++
Sbjct:  103 ANDTTILEASPSGTPLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPY------CAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLM--TSHLES--------TREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGG---LPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRF------------------PSDHWGLLCTLN 367
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy Swiss-Prot
Match: TYDP2_BOVIN (Tyrosyl-DNA phosphodiesterase 2 OS=Bos taurus GN=TDP2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.587e-15
Identity = 79/280 (28.21%), Postives = 125/280 (44.64%), Query Frame = -1 
Query:  203 ILSYNVWFREDLEVH---KRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYF-CIQLSKFPVKSFRRE--PFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKP---NVIFGGDMNW-DDKLDGQFPLTDGWIDAWNEL-RPAEDGWTYDTKSNQMLSANRTLRKRLDR--FLCKLNGFKVC--AVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTI 997
            + S+  W  + L+++   +R + +   + L+SPD+I  QEV P  Y       + K    S    T     YF  I L K  VK   +E  PF N+ M R L    V +SG E  L + T+HLES         + ++KER+ Q K+ +  ++  P    VIF GD N  D ++     L +  +D W  L +P    +T+DT+ N  L      + R DR  F     G  +   +++++G+E +    +                  PSDH+GLL T+
Sbjct:  115 VFSFITWNIDGLDMNNLLERARGVCSYLTLYSPDVIFLQEVIPPYY------AYLKKKASSYKIITGREEGYFTAIMLKKSRVKFKSQEIIPFPNTQMMRNLLCVHVSVSGNE--LCLMTSHLEST--------RGHAKERMNQFKMVLEKMQEAPGSATVIFAGDTNLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYTWDTQMNSNLGIAANCKLRFDRIFFRAAAEGGHIIPQSLDLLGLEKLDCGRF------------------PSDHWGLLCTL 360
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy Swiss-Prot
Match: TYDP2_RAT (Tyrosyl-DNA phosphodiesterase 2 OS=Rattus norvegicus GN=Tdp2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.483e-15
Identity = 86/302 (28.48%), Postives = 131/302 (43.38%), Query Frame = -1 
Query:  200 SNKAVQIEGSNSGSIKASLKILSYNVWFREDLE---VHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYF-CIQLSKFPVKSFRRE--PFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILE---NKPNVIFGGDMNWDD----KLDGQFPLTDGWIDAWNEL-RPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVC--AVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTIS 1057
            +N    +E S SG+       +S+  W  + L+   + +R + +   + L+SPD++  QEV P      R     K  R + +  T +   YF  I L K  VK   +E  PF N+ M R L    V L G E  L+  T+HLES         + +S ER+ Q K     ++   +   VIF GD N  D    K  G   L D   DAW  L +P    +T+DTK+N  L      + R DR   +     +   ++++IG+E +    +                  PSDH+GLL T++
Sbjct:   99 ANDTTILETSPSGTPLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPSYCAYLR-----KRAR-TYNIITGNEEGYFTAILLKKGRVKFKGQEIIPFPNTKMMRNLLCVNVSLGGNEFCLM--TSHLEST--------RKHSAERINQLKTVFQKMQEATDSTTVIFAGDTNLRDQEVIKCGG---LPDNVFDAWEFLGKPKHCRYTWDTKANDNLRIPAACKHRFDRIFFRAEEGHLIPQSLDLIGLERLDCGRF------------------PSDHWGLLCTLN 363
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy Swiss-Prot
Match: TYDP2_CHICK (Tyrosyl-DNA phosphodiesterase 2 OS=Gallus gallus GN=TDP2 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.027e-14
Identity = 86/309 (27.83%), Postives = 135/309 (43.69%), Query Frame = -1 
Query:  212 CIELGGFRGIKASNKAVQIEGSNSGSIKASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSNWWKGYRCSISDDTASLRAYFCIQLSKFP-VKSFRRE--PFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKP---NVIFGGDMNWDD----KLDGQFPLTDGWIDAWNEL-RPAEDGWTYDTKSNQMLSANRTLRKRLDR--FLCKLNGFKVCA--VEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLL 1093
            CI+L       ASN +     S      +S  ++++N+   +   + +R + +   + L+SPD++  QEV P    I +      GY         ++  YF   L K P VK  ++E   F  + M R L +  V +SG E  L + T+HLES         + +SKER++Q ++ +N ++ +     VIFGGD N  D    KL G   L     D W  L +P    +T+DT SN  L      + R DR  F     G  +    +++IG+E +    +                  PSDH+GLL
Sbjct:   93 CIDLTA--DDTASNTSSSGADSKQQDDDSSFSLITWNIDGLDLGNLQERARGVCSYLALYSPDVVFLQEVIPPYLCILQ--RRAGGYTII----PGNVDGYFTAMLLKKPRVKVLKQEIIRFPTTSMMRNLLVVHVNISGNE--LCLMTSHLEST--------RDHSKERMKQLQIVLNKMQEESQSTTVIFGGDTNLRDSEVAKLGG---LPKNITDIWEFLGKPQHCRYTWDTSSNTNLRIESKCKLRFDRLYFRPAAEGGHIIPRNMDLIGLEKLDCGRF------------------PSDHWGLL 362
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy Swiss-Prot
Match: TYDP2_HUMAN (Tyrosyl-DNA phosphodiesterase 2 OS=Homo sapiens GN=TDP2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.489e-13
Identity = 74/271 (27.31%), Postives = 115/271 (42.44%), Query Frame = -1 
Query:  203 VHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIF--RGSNWWKGYRCSISDDTASLRAYF-CIQLSKFPVKSFRRE--PFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKP---NVIFGGDMNWDDK-LDGQFPLTDGWIDAWNEL-RPAEDGWTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVCA---------VEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTI 958
            + +R + +   + L+SPD+I  QEV P  Y     R SN+           T     YF  I L K  VK   +E  PF ++ M R L    V +SG E  L + T+HLES         + ++ ER+ Q K+ +  ++  P    VIF GD N  D+ +     L +  +D W  L +P    +T+DT+ N  L      + R DR       F+  A         ++++G+E +    +                  PSDH+GLL  +
Sbjct:  129 LSERARGVCSYLALYSPDVIFLQEVIPPYYSYLKKRSSNY--------EIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVSGNE--LCLMTSHLES--------TRGHAAERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRFDRIF-----FRAAAEEGHIIPRSLDLLGLEKLDCGRF------------------PSDHWGLLCNL 358
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy Swiss-Prot
Match: TYDP2_DANRE (Tyrosyl-DNA phosphodiesterase 2 OS=Danio rerio GN=tdp2 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 1.187e-12
Identity = 89/325 (27.38%), Postives = 139/325 (42.77%), Query Frame = -1 
Query:  197 NEDCIELGGFR---GIKASNKAVQIE-GSNSGSIKAS-LKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPMIYDIFRGSN----WWKGYRCSISDDTASLRAYFC-IQLSKFPVKSFRRE--PFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAINILENKPN---VIFGGDMNW-DDKLDGQFPLTDGWIDAWNELRPAEDG-WTYDTKSNQMLSANRTLRKRLDRFLCKLNGFKVC------AVEMIGVEPIPGLSYTKEKNVRXXXXXXXLPVLPSDHYGLLLTISS 1102
            N DCI+L        I  ++K  Q E G+    ++ S L I+S+NV   + L +  R + +   + L++PD++  QE+ P      +       +++G     SDD      YF  I L K  VK    E   F  + M R L + +V  SG +  L + T+HLES         +  S+ER +Q +V +  ++  P    VIF GD N  D ++     L  G  D W +L   E   +T+DTK+N   +     R R DR    L   K         + +IG+E +    YT                  SDH+G+  T ++
Sbjct:   85 NADCIDLTAEEPTCSITVNSKENQAENGTAKSEVEDSKLSIISWNVDGLDTLNLADRARGLCSYLALYTPDVVFLQELIPAYVQYLKKRAVSYLFFEG-----SDD-----GYFTGIMLRKSRVKFLESEIICFPTTQMMRNLLIAQVTFSGQK--LYLMTSHLESC--------KNQSQERTKQLRVVLQKIKEAPEDAIVIFAGDTNLRDAEVANVGGLPAGVCDVWEQLGKQEHCRYTWDTKANSNKTVPYVSRCRFDRIF--LRSAKTAPPVTPDHMALIGMEKLDCGRYT------------------SDHWGIYCTFNT 369
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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy Swiss-Prot
Match: TYDP2_CAEBR (5'-tyrosyl-DNA phosphodiesterase OS=Caenorhabditis briggsae GN=CBG18823 PE=3 SV=2)

HSP 1 Score: 60.4622 bits (145), Expect = 7.989e-9
Identity = 67/238 (28.15%), Postives = 107/238 (44.96%), Query Frame = -1 
Query:  368 NKAVQIEGSNSGSIKASLKILSYNVWFREDLEVHKRMKAIGDLIQLHSPDIICFQEVTPM-IYDIFRGSNWWKGYRCSISDDTASLRAYFCIQLSK-FPVKSFRREPFDNSIMGRELCMTEVELSGGETTLVVATTHLESPCPAPPKWDQMYSKERVEQAKVAIN----ILENKPN--VIFGGDMNWDDKLDGQFPLTDGWIDAWNELR-PAEDGWTYDTKSNQMLSANRTLRKRLDR 1054
            N+AV    S++G     L ++S+N+   +   +  RMKA+  +++  +PDI+  QEV    +  I +  + +K Y  +        + Y  I +SK F V+      F NS M R L + E  + G +  LV   THLES         + +  +R+ Q    ++    I+ N P   + FGGD+N  D+     P  DG +DAW       +  WT+DT  N         + R DR
Sbjct:   80 NEAVMGPSSSAG---FELSLMSWNIDGLDGRSLATRMKAVATIVKKVNPDILFLQEVVDRDLEPIDKLQSLYKIYYSN-----KGCQYYTAILVSKMFEVEKHDVVHFQNSGMYRTLQIVEGSIGGMKVFLV--NTHLESM--------RDHRAQRMAQFSFCMDRCAEIIANNPGCFLFFGGDLNLRDEEISSIP--DGVLDAWVSAGCDTKTKWTWDTYKNDNKQGFNGAKMRFDR 297
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V7C6Z8_PHAVU4.829e-14267.57Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
E5GC61_CUCME4.229e-14169.44Endonuclease/exonuclease/phosphatase family protei... [more]
V4UKW6_9ROSI5.889e-14172.95Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067JML7_JATCU2.890e-14068.30Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A059CFI9_EUCGR4.059e-13866.34Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A0A0LRJ9_CUCSA8.767e-13868.46Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
G7JJ90_MEDTR4.795e-13668.42Endonuclease/exonuclease/phosphatase family protei... [more]
M5WJQ0_PRUPE6.918e-13670.73Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
C6TAL8_SOYBN1.490e-13567.26Putative uncharacterized protein OS=Glycine max PE... [more]
W9R361_9ROSA6.548e-13565.83Tyrosyl-DNA phosphodiesterase 2 OS=Morus notabilis... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0001670 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
TYDP2_XENTR1.113e-1827.74Tyrosyl-DNA phosphodiesterase 2 OS=Xenopus tropica... [more]
TYDP2_XENLA1.487e-1727.53Tyrosyl-DNA phosphodiesterase 2 OS=Xenopus laevis ... [more]
TYDP2_MOUSE1.952e-1728.15Tyrosyl-DNA phosphodiesterase 2 OS=Mus musculus GN... [more]
TYDP2_BOVIN1.587e-1528.21Tyrosyl-DNA phosphodiesterase 2 OS=Bos taurus GN=T... [more]
TYDP2_RAT5.483e-1528.48Tyrosyl-DNA phosphodiesterase 2 OS=Rattus norvegic... [more]
TYDP2_CHICK7.027e-1427.83Tyrosyl-DNA phosphodiesterase 2 OS=Gallus gallus G... [more]
TYDP2_HUMAN5.489e-1327.31Tyrosyl-DNA phosphodiesterase 2 OS=Homo sapiens GN... [more]
TYDP2_DANRE1.187e-1227.38Tyrosyl-DNA phosphodiesterase 2 OS=Danio rerio GN=... [more]
TYDP2_CAEBR7.989e-928.155'-tyrosyl-DNA phosphodiesterase OS=Caenorhabditis... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005135Endonuclease/exonuclease/phosphataseGENE3D3.60.10.10coord: 33..302
e-value: 1.4E-14
score: 53.7
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 39..295
e-value: 2.8E-19
score: 69.8
IPR005135Endonuclease/exonuclease/phosphataseSUPERFAMILY56219DNase I-likecoord: 35..302
NoneNo IPR availablePANTHERPTHR15822:SF4TYROSYL-DNA PHOSPHODIESTERASE 2coord: 18..305
NoneNo IPR availablePANTHERPTHR15822TRAF AND TNF RECEPTOR-ASSOCIATED PROTEINcoord: 18..305

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0001670 ID=g.arboreum_cottongen_reftransV1_0001670; Name=g.arboreum_cottongen_reftransV1_0001670; organism=Gossypium arboreum; type=contig; length=1129bp
GACAAAATGATCATATGATTTCCATACATGGAAGTTTTCATACAAAAAAA
GCTAAATGCTGCAAACCATTCGCATCATAGTCCGTTACTAGTCTATACAA
AATCGGCATACGAGTATGACCGCAAATACGGATGAAAATAGACGAACAAT
TCGAGCTTAAACCGAACCATATATGATGCCAGACCGGGCATTACTGACTT
GAGATTGTTAAAAGCAAGCCATAATGATCACTTGGCAAAACAGGAAGTTC
CAATAACTTCTTCTCTTTCCTCACATTCTTCTCCTTGGTATATGATAAAC
CCGGTATTGGCTCTACCCCGATCATCTCGACTGCACAGACTTTAAAACCA
TTCAGCTTGCATAGAAAGCGATCTAGTCGTTTTCGTAATGTACGATTTGC
CGATAACATCTGGTTTGATTTGGTATCATACGTCCATCCATCTTCAGCAG
GCCTTAACTCGTTCCAAGCATCAATCCATCCATCAGTTAAAGGAAACTGA
CCATCTAATTTGTCATCCCAATTCATATCACCACCAAAAATAACATTCGG
CTTATTCTCGAGAATATTGATCGCTACTTTCGCTTGTTCTACACGTTCCT
TACTATACATTTGATCCCATTTCGGCGGAGCAGGACACGGACTCTCGAGA
TGGGTAGTAGCAACAACAAGCGTTGTTTCACCCCCAGAAAGTTCAACCTC
AGTCATGCAAAGTTCTCGCCCCATTATCGAATTATCAAAAGGTTCACGAC
GAAAGGATTTCACAGGGAATTTGCTTAACTGTATACAAAAGTAAGCTCTC
AAACTCGCCGTGTCGTCTGAGATAGAGCACCGGTACCCTTTCCACCAGTT
AGACCCACGAAAAATGTCATAAATCATCGGAGTAACCTCTTGAAAACAAA
TGATATCAGGGGAATGAAGTTGAATAAGGTCACCAATAGCTTTCATCCTC
TTGTGAACCTCTAAATCTTCCCTAAACCAAACATTGTAGCTCAATATCTT
CAATGAAGCTTTAATGGATCCTGAATTACTACCCTCTATTTGAACAGCTT
TATTGGAGGCTTTAATGCCACGAAAACCACCCAATTCGATACAATCTTCA
TTACCCAGATTTGGTTCCCTGATCTTCCT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase