g.arboreum_cottongen_reftransV1_0010582, g.arboreum_cottongen_reftransV1_0010582 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: R0GUZ4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10004238mg PE=4 SV=1) HSP 1 Score: 610.912 bits (1574), Expect = 0.000e+0 Identity = 281/424 (66.27%), Postives = 349/424 (82.31%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLIN-----GAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R+IFDQ +KDLV W+ MIS YAE+D PQEALR+F E++ GI+PD +TM SVISACANLG L AKW+H Y +G L INNALI+MYAKCG L ARNVFE M +RNV+SW+ MINA+++HG+A++AL F +MK+ PN +TFVGVLY CSH+GLVE+G+KIFASM +E+NITP EHYGCMVDL RAN L+EA+EI+E+MP APNVVIWGSLMSAC++HGE +LGE AK +L+LEPDHDGALVL+SNIYA+E++W +V ++R +MKE+ + KE+G SRI+LN + HEFL+ D+ HKQ+ +IY KL+EVVS+LKL GY P++G VLVD+EEEEK ++VLWHSEKLALC+GL+N G+ + IRIVKNLRVCEDCHTF KLVSKVY REIIVRDRTRFHHY+DG+CSCRDYW Sbjct: 301 RVIFDQTEKKDLVCWTTMISAYAENDHPQEALRVFDEMRYSGIKPDLITMFSVISACANLGTLGNAKWVHHYTHISGLESVLPINNALINMYAKCGGLNEARNVFENMPTRNVVSWSSMINAYSMHGEASDALISFARMKQENAVPNAITFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPTLEHYGCMVDLFCRANRLQEALEIIESMPMAPNVVIWGSLMSACRVHGELKLGESAAKHILKLEPDHDGALVLMSNIYAREQRWDDVRNIRCVMKEKNVFKEKGLSRIDLNGKSHEFLIGDKRHKQSDKIYAKLDEVVSKLKLAGYVPHSGSVLVDVEEEEKNDLVLWHSEKLALCFGLMNKEEEKGSCGTVIRIVKNLRVCEDCHTFFKLVSKVYEREIIVRDRTRFHHYKDGLCSCRDYW 724 HSP 2 Score: 123.635 bits (309), Expect = 7.774e-27 Identity = 70/265 (26.42%), Postives = 132/265 (49.81%), Query Frame = -2 Query: 667 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRN-------------------------------VISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKI--FASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1362 R +FD+M ++D+V+W+ MI Y EA +LF+E++ + PD++ + +++SAC G + + I+ + +N + AL+ MYA G ++ AR FEKM+ RN ++ WT MI+A+A + ALR F +M+ + ++P+ +T V+ AC++ G + + + + + + ++ P + ++++ + L EA + E MP NVV W S+++A +HGE Sbjct: 169 RNVFDEMSQRDVVTWNTMIDRYCRCGLLDEAFKLFEEMKFSNVMPDEMILCNIVSACGRTGNMSYNRAIYDFLIENDVSMDTHLLTALVTMYAGSGCMDMAREFFEKMSVRNLFVSTAMVSGYSKAGRLNEARVIFDQTEKKDLVCWTTMISAYAENDHPQEALRVFDEMRYSGIKPDLITMFSVISACANLGTLGNAKWVHHYTHISGLESVLPIN---NALINMYAKCGGLNEARNVFENMP-TRNVVSWSSMINAYSMHGEA 429 HSP 3 Score: 92.4337 bits (228), Expect = 1.020e-16 Identity = 55/231 (23.81%), Postives = 109/231 (47.19%), Query Frame = -2 Query: 634 VSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVL 1326 V ++ + + S++P+ + ++ ++ G R DQ + ++ A + + IH A K + L+DMYA CG +E ARNVF++M+ R+V++W MI+ + G + A + F++MK + V P+ + ++ AC G + R I+ +I E++++ +V + + + A E E M + +S + G ++ G RV+ Sbjct: 80 VVFNPFLRDLSRSNEPRATILFYQRIRHAGGRLDQFSFPPILKAACKVSAFFEGMEIHGVAFKMATLSDPFVQTGLMDMYASCGRIECARNVFDEMSQRDVVTWNTMIDRYCRCGLLDEAFKLFEEMKFSNVMPDEMILCNIVSACGRTGNMSYNRAIYDFLI-ENDVSMDTHLLTALVTMYAGSGCMDMAREFFEKMS------VRNLFVSTAMVSGYSKAGRLNEARVI 303
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: S8CJR2_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_09864 PE=4 SV=1) HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0 Identity = 274/420 (65.24%), Postives = 337/420 (80.24%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHY-RDGVCSCRDYW 1362 RL+FD+MV+KDLV WSAMIS YAESD PQEAL++F ++Q GI+PDQVTMLSVISACA+LG L +AK IH + FG +L INNALIDMYAKCGSL A VF +M +NVISW+ MINAFA+HGDA NAL++F MK VEPN +TFVGVLYACSHAGLV +G+K F SM+ E+ ITPK EHYGC+VDL GRAN +R+A++IVETMP APNVVIWGSLM AC IHGE +LG + AK+VLEL+P HDGA + LSN YAKER W++VG LR LM++RGI KERG S IE+ + +HEFL DR H++A EIY KL +VV ++K GY+PNTG VL+D++E+EK VV+ HSEKLALCYGLI ++ CIRI+KNLR+CEDCH F+KL S V++REI++RDR+RFH + DG CSC D+W Sbjct: 309 RLVFDEMVDKDLVCWSAMISCYAESDHPQEALKIFDQMQQNGIKPDQVTMLSVISACAHLGALHRAKQIHETVVRKEFGRALPINNALIDMYAKCGSLHDASEVFIRMHHKNVISWSSMINAFAVHGDAANALKHFTLMKLENVEPNWITFVGVLYACSHAGLVVEGQKAFESMVEEYRITPKLEHYGCLVDLYGRANHIRKALQIVETMPMAPNVVIWGSLMGACWIHGEFDLGVYAAKQVLELDPSHDGAHIFLSNAYAKERWWESVGGLRGLMRQRGIVKERGCSAIEVGDRIHEFLTGDRRHERADEIYAKLYQVVEKVKQVGYSPNTGGVLIDVDEDEKEAVVIGHSEKLALCYGLIEKGEEGCIRIIKNLRICEDCHKFVKLASGVFKREIVIRDRSRFHRFGGDGSCSCGDFW 728 HSP 2 Score: 127.102 bits (318), Expect = 4.469e-28 Identity = 76/283 (26.86%), Postives = 142/283 (50.18%), Query Frame = -2 Query: 619 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGD-------------------------------ANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEH--NITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET--ELGEFTAKRVLELEPD 1362 R +FD M KD+V+W+ MI GY +S +AL L +E++ G+ PD+ +++S CA LD K +H ++G ++ AL++MYA G+++ A+ +++KM +NV++ T MI + HGD AL+ F +M++ ++P+ VT + V+ AC+H G + ++I +++ + P + ++D+ + L +A E+ M NV+ W S+++A +HG+ L FT ++ +EP+ Sbjct: 178 RFLFDAMSHKDIVAWNIMIDGYCQSQLFDDALALLEEMKS-GVEPDERIFTTILSGCARFKKLDIGKSVHELISRSGTVLDSQLQTALVNMYANSGAMDLAQTLYDKMKIKNVVASTVMITGHSRHGDIGAARLVFDEMVDKDLVCWSAMISCYAESDHPQEALKIFDQMQQNGIKPDQVTMLSVISACAHLGALHRAKQIHETVVRKEFGRALPINN---ALIDMYAKCGSLHDASEVFIRM-HHKNVISWSSMINAFAVHGDAANALKHFTLMKLENVEPN 455 HSP 3 Score: 70.4774 bits (171), Expect = 1.190e-9 Identity = 59/271 (21.77%), Postives = 119/271 (43.91%), Query Frame = -2 Query: 508 MISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNI---YAKERKWQNVGDLRQLMKERGISKER 1311 +I+ + S + A+ F+ + D+ + +I + LD+ + H A K G+ + AL+ MY CG + AR +F+ M+ +++++W MI+ + ++AL ++MK VEP+ F +L C+ ++ G+ + +I+ + +V++ + + A + + M NVV S I G + G+ A R++ + D LV S + YA+ Q + M++ GI ++ Sbjct: 94 IINHLSRSSDNRNAILFFQAMLRKDFPIDRFSFPPMIKTASKARALDEGRMFHALAAKLGYDSDPFVETALMGMYGACGLISDARFLFDAMSHKDIVAWNIMIDGYCQSQLFDDALALLEEMKSG-VEPDERIFTTILSGCARFKKLDIGKSVH-ELISRSGTVLDSQLQTALVNMYANSGAMDLAQTLYDKMKI-KNVV-----ASTVMITGHSRHGDIGAARLV-FDEMVDKDLVCWSAMISCYAESDHPQEALKIFDQMQQNGIKPDQ 355
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: M0UAN8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 519.235 bits (1336), Expect = 1.557e-178 Identity = 243/419 (58.00%), Postives = 305/419 (72.79%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R IFDQM +KDLV WSAMISGYAESDQP EAL+LF E+ +LG++PDQ+TMLSVISACAN+G D+AKW+H++ DKNGF L I NALIDMY+KCGSL AR +F++ ++VI+WT MI FA+HG+ +AL F M V+PNGVTF+ +LYACSHAGLV++GR+IF SMI ++ + PKHEHYGCMVDLLGRA LL+EA+E +E+MPFAPNVV+WGSL+ AC+IHG+ +LGE A+R+LEL+P+HDGA VLLSNIYAK +W++V ++R LMK +G H ++ EIY K L+EEEKRE +L HSEKLAL GLI+ K S I I KNLRVC+DCHTF+KL SKV+ REI++RDRTRFHHY+DGVCSC D+W Sbjct: 66 RFIFDQMTDKDLVCWSAMISGYAESDQPNEALKLFNEMHLLGVKPDQITMLSVISACANMGARDQAKWVHIFVDKNGFHQILSIRNALIDMYSKCGSLVDARTIFDETAFKDVITWTSMITGFAMHGNGRSALAVFDHMISEGVKPNGVTFISLLYACSHAGLVDEGRRIFESMIQDYRLEPKHEHYGCMVDLLGRARLLQEALEFIESMPFAPNVVVWGSLLGACRIHGDVKLGELVARRLLELDPNHDGAYVLLSNIYAKASRWEDVREVRNLMKNKGC------------------------HPRSSEIYGK-----------------------LDEEEKREAILLHSEKLALSLGLIDSKKGSSIHIAKNLRVCDDCHTFMKLASKVFEREIVLRDRTRFHHYKDGVCSCGDFW 437
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: M0TTX8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 517.309 bits (1331), Expect = 9.596e-178 Identity = 242/419 (57.76%), Postives = 304/419 (72.55%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R IFDQM +KDLV WSAMISGYAESDQP EAL+LF E+ +LG++PDQ+TMLSVISACAN+G D+AKW+H++ DKNGF L I NALIDMY+KCGSL AR +F++ ++VI+WT MI FA+HG+ +AL F M V+PNGVTF+ +LYACSHAGLV++GR+IF SMI ++ + PKHEHYGCMVDLLGRA LL+EA+E +E+MPFAPNVV+WGSL+ AC+IHG+ +LGE A+R+LEL+P+HDGA VLLSNIYAK +W++V ++R LMK +G H ++ EIY K L+EEEKRE +L HSEKLAL GLI+ K S I I KN+RVC DCHTF+KL SKV+ REI++RDRTRFHHY+DGVCSC D+W Sbjct: 66 RFIFDQMTDKDLVCWSAMISGYAESDQPNEALKLFNEMHLLGVKPDQITMLSVISACANMGARDQAKWVHIFVDKNGFHQILSIRNALIDMYSKCGSLVDARTIFDETAFKDVITWTSMITGFAMHGNGRSALAVFDHMISEGVKPNGVTFISLLYACSHAGLVDEGRRIFESMIQDYRLEPKHEHYGCMVDLLGRARLLQEALEFIESMPFAPNVVVWGSLLGACRIHGDVKLGELVARRLLELDPNHDGAYVLLSNIYAKASRWEDVREVRNLMKNKGC------------------------HPRSNEIYGK-----------------------LDEEEKREAILLHSEKLALSLGLIDSKKGSSIHIAKNIRVCNDCHTFMKLASKVFEREIVLRDRTRFHHYKDGVCSCGDFW 437
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: A0A078I121_BRANA (BnaC01g22730D protein OS=Brassica napus GN=BnaC01g22730D PE=4 SV=1) HSP 1 Score: 481.871 bits (1239), Expect = 4.774e-161 Identity = 222/339 (65.49%), Postives = 276/339 (81.42%), Query Frame = -2 Query: 346 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDL 1362 R IFD+M +KDLV W+ MIS YAESD P+EALR+F E++ G PD++ M SV+SACA+LGVL+KAKW+H Y +NGF SL +NNALI+MYAKCGSL+ AR VFE+M ++NV+SW+ MINAF++HG+AN+AL F +MK+ VEPN VTFVGVLY CSH+GLVE+G KI ASM +E+NITPK EHYGCMVDL GRAN L EA+E++E+MP APNV IWGSLMSAC++HGE ELGEF AKRVLELEPDHDGALVL+SNIYA+E +W +V +R+ M+E+ + KE+G SRI+LN E HEFL+ D+ HKQ+ EI KL EVVS LKL G P+ G VLVD+ Sbjct: 295 RDIFDRMEKKDLVCWTTMISAYAESDHPEEALRVFDEMRRYGTEPDEIAMGSVVSACASLGVLEKAKWVHEYTHRNGFESSLTVNNALINMYAKCGSLDAARGVFEEMPTKNVVSWSSMINAFSMHGEANDALALFARMKQENVEPNDVTFVGVLYGCSHSGLVEEGNKILASMTDEYNITPKLEHYGCMVDLFGRANRLPEALEVIESMPMAPNVFIWGSLMSACRVHGELELGEFAAKRVLELEPDHDGALVLMSNIYAREERWDDVRKVRRGMEEKNVFKEKGVSRIDLNGESHEFLIGDKRHKQSDEISAKLKEVVSELKLAGCIPDYGSVLVDV 633 HSP 2 Score: 115.546 bits (288), Expect = 2.350e-24 Identity = 75/289 (25.95%), Postives = 137/289 (47.40%), Query Frame = -2 Query: 619 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNG--------------FGG-----------------SLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDG--------RKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE--LGEFTAKRVLELEPD 1362 R +FD+M ++D+V+W+ MI Y +EA +LF+E++ + PD++ + +++SACA G I+ + +N + G SL ++ A++ +AK L+ AR++F++M ++++ WT MI+A+A ALR F +M+ EP+ + V+ AC+ G++E R F S + +N ++++ + L A + E MP NVV W S+++A +HGE L F + +EP+ Sbjct: 163 RKVFDEMPQRDVVTWNTMIERYCRCGFLEEAFKLFEEMKCSNVMPDEMILCNIVSACARSGNTRYNSPIYEFLKENDVRMDAHLLTALVTMYAGAGCMDIAREFYMKMSVRSLFVSTAMVSGFAKARRLDDARDIFDRMEKKDLVCWTTMISAYAESDHPEEALRVFDEMRRYGTEPDEIAMGSVVSACASLGVLEKAKWVHEYTHRNGFESSLTVNN---------ALINMYAKCGSLDAARGVFEEMP-TKNVVSWSSMINAFSMHGEANDALALFARMKQENVEPN 441 HSP 3 Score: 85.5001 bits (210), Expect = 1.567e-14 Identity = 65/258 (25.19%), Postives = 113/258 (43.80%), Query Frame = -2 Query: 619 AESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASM------INEHNITPKHEHY---GC---------------------MVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSAC--QIHGETELGEFTAKRVLELEPD 1296 + SD+P+ + ++ ++ G R DQ + ++ A A + L + +H A K + A++DMYA CG + AR VF++M R+V++W MI + G A + F++MK + V P+ + ++ AC+ +G I+ + ++ H +T Y GC MV +A L +A +I + M ++V W +++SA H E L F R EPD Sbjct: 84 SRSDEPRATILFYQRIRHAGGRLDQFSFTPILKAAAKVSALFEGTELHGLALKLATLSDPFVKTAVMDMYACCGKIVEARKVFDEMPQRDVVTWNTMIERYCRCGFLEEAFKLFEEMKCSNVMPDEMILCNIVSACARSGNTRYNSPIYEFLKENDVRMDAHLLTALVTMYAGAGCMDIAREFYMKMSVRSLFVSTAMVSGFAKARRLDDARDIFDRME-KKDLVCWTTMISAYAESDHPEEALRVFDEMRRYGTEPD 340
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: OGR1_ORYSJ (Pentatricopeptide repeat-containing protein OGR1, mitochondrial OS=Oryza sativa subsp. japonica GN=OGR1 PE=2 SV=1) HSP 1 Score: 385.956 bits (990), Expect = 3.151e-126 Identity = 184/427 (43.09%), Postives = 278/427 (65.11%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKEL----QILGIR--PDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFE--KMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R +FD+M +D+ +W+++++G A+ +P AL LF L Q L R P++VT+++ +SACA +G+L ++H +A + G ++R+ N+LIDMY+KCGSL RA +VF K + ++S+ I A ++HG +ALR F +M R+EP+GVT++ VL C+H+GLV+DG ++F SM + P +HYG +VDLLGRA L EA + V +MPF ++V+W +L+ A ++HG EL E A ++ EL + DG VLLSN+YA + +W +VG +R M+ + K G+S E++ +H+F+ D+ H + EIY L ++VSR+ GY P T VL D+ EEEK+ + +HSEKLA+ +GLI +R++KNLR+C DCH KL+SK Y R I++RDR RFH + DG CSCRDYW Sbjct: 166 RKVFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALRLFDEMP-TRIEPDGVTYLAVLCGCNHSGLVDDGLRVFNSM----RVAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW 587 HSP 2 Score: 85.8853 bits (211), Expect = 1.670e-16 Identity = 55/197 (27.92%), Postives = 95/197 (48.22%), Query Frame = -2 Query: 673 RPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMK------EARVEPNGVTFVGVLYACSHAGLVEDGRKI--FASMIN-EHNITPKHEHYGCMVDLLGRANLLREAVEIVETM-PFAPNVVIWGSLMSACQIHG 1233 RPD +++ + A A +H + G +R+ L+D YAKCG L AR VF++MT R+V +W ++ A + N AL F ++ +R EPN VT V L AC+ GL++DG + FA + N+ + ++D+ + L A+++ ++ P +V + + + A +HG Sbjct: 108 RPDALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNS----LIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHG 300
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 385.956 bits (990), Expect = 4.016e-125 Identity = 180/419 (42.96%), Postives = 272/419 (64.92%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R +FD MVEKD+V+WS MI GYA + P+E + LF ++ ++PDQ +++ +S+CA+LG LD +W D++ F +L + NALIDMYAKCG++ R VF++M ++++ I+ A +G + F + ++ + P+G TF+G+L C HAGL++DG + F ++ + + EHYGCMVDL GRA +L +A ++ MP PN ++WG+L+S C++ +T+L E K ++ LEP + G V LSNIY+ +W ++R +M ++G+ K GYS IEL +VHEFL D++H + +IY KL ++ + ++L G+ P T V D+EEEEK V+ +HSEKLA+ GLI+ IR+VKNLRVC DCH +KL+SK+ RREI+VRD RFH + +G CSC DYW Sbjct: 267 RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685 HSP 2 Score: 137.887 bits (346), Expect = 1.187e-33 Identity = 70/256 (27.34%), Postives = 140/256 (54.69%), Query Frame = -2 Query: 595 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETEL--GEFTAKRVLELEPDHDGALVLL 1356 +FD++ ++ +V+W+A+ SGY S + +EA+ LFK++ +G++PD ++ V+SAC ++G LD +WI Y ++ + + L+++YAKCG +E+AR+VF+ M +++++W+ MI +A + + F +M + ++P+ + VG L +C+ G ++ G + S+I+ H ++D+ + + E+ + M ++VI + +S +G +L F L + PD L LL Sbjct: 168 LFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL 421 HSP 3 Score: 82.4185 bits (202), Expect = 2.294e-15 Identity = 52/224 (23.21%), Postives = 102/224 (45.54%), Query Frame = -2 Query: 688 LIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSA 1359 L+F ++ ++++I+G+ + E L LF ++ G+ T V+ AC +H K GF + +L+ +Y+ G L A +F+++ R+V++WT + + + G A+ F+KM E V+P+ V VL AC H G ++ G I M E + +V+L + + +A + ++M ++V W +++ Sbjct: 66 LLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG 287
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2 SV=2) HSP 1 Score: 381.333 bits (978), Expect = 7.353e-124 Identity = 197/434 (45.39%), Postives = 266/434 (61.29%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKN---GFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEAR--VEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET-ELGEFTAKRVLELEPDHD-------GALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPN-TGCVLVDLEEEEKREVVL-WHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R +FD+M E+ LVSW++MI + AL+LF+E+Q PD TM SV+SACA LG L W H + + + + N+LI+MY KCGSL A VF+ M R++ SW MI FA HG A A+ +F +M + R V PN VTFVG+L AC+H G V GR+ F M+ ++ I P EHYGC+VDL+ RA + EA+++V +MP P+ VIW SL+ AC G + EL E A+ ++ + D++ GA VLLS +YA +W +VG +R+LM E GI KE G S IE+N HEF D +H Q +IY++L + RL+ GY P+ + LVD + +E L HSE+LA+ +GLIN + IRI KNLRVC DCH KL+SKV+ EIIVRDR RFHH++DG CSC DYW Sbjct: 206 RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638 HSP 2 Score: 109.383 bits (272), Expect = 3.136e-24 Identity = 66/235 (28.09%), Postives = 123/235 (52.34%), Query Frame = -2 Query: 664 IFDQMVEKDLVSWSAMISGYA-ESDQPQEALRLFKELQILG-IRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHY--GCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE 1356 +FD + W+ +I A + + +EA L++++ G PD+ T V+ ACA + + K +H K+GFGG + +NN LI +Y CG L+ AR VF++M R+++SW MI+A G+ ++AL+ F++M+ + EP+G T VL AC+ G + G A ++ + ++ + ++++ + LR A ++ + M ++ W +++ HG E Sbjct: 105 VFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAE 337
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP316_ARATH (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3) HSP 1 Score: 381.333 bits (978), Expect = 1.072e-123 Identity = 181/415 (43.61%), Postives = 275/415 (66.27%), Query Frame = -2 Query: 106 DQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1350 D V K+LV+W+AMISGY E+ +P++ L+LF+ + GIRP+ + S + C+ L L + IH K+ + +LI MY KCG L A +FE M ++V++W MI+ +A HG+A+ AL F++M + ++ P+ +TFV VL AC+HAGLV G F SM+ ++ + P+ +HY CMVDLLGRA L EA++++ +MPF P+ ++G+L+ AC++H EL EF A+++L+L + V L+NIYA + +W++V +R+ MKE + K GYS IE+ N+VH F +DR H + I++KL E+ ++KL GY P L ++EEE+K +++LWHSEKLA+ +G I + S I++ KNLR+C DCH +K +S++ +REIIVRD TRFHH++DG CSC DYW Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656 HSP 2 Score: 60.077 bits (144), Expect = 2.480e-8 Identity = 34/110 (30.91%), Postives = 58/110 (52.73%), Query Frame = -2 Query: 1030 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLD-KAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSR 1356 +F+ M +KD+V+W+AMISGYA+ +AL LF+E+ IRPD +T ++V+ AC + G+++ + ++D+ + G LE A + M R Sbjct: 341 LFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450 HSP 3 Score: 57.3806 bits (137), Expect = 1.562e-7 Identity = 62/256 (24.22%), Postives = 106/256 (41.41%), Query Frame = -2 Query: 691 IFDQMVEKDLVSWSAMISGYA-ESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQ----------------------------KMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLL-----REAVEIVETMPFAPNVVIWGSLMS 1356 +F M K+ ++W++++ G + + + EA +LF E+ PD + ++S +KA+ + D+ F + N +I YA+ G +E+AR +F M +N +SW MI+ + GD A +F+ K+ V N VT+ ++ EDG K+F +M+ E I P G LLG + L R+ +IV +V SL+S Sbjct: 83 VFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP----EPDTFSYNIMLSCYVRNVNFEKAQ---SFFDRMPFKDAASWNT-MITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAML-EEGIRPNSS--GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLIS 327
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 380.563 bits (976), Expect = 1.539e-123 Identity = 188/419 (44.87%), Postives = 269/419 (64.20%), Query Frame = -2 Query: 106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMT-SRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLD-GYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356 IF +M +D VSWS MI G A + E+ F+ELQ G+ P++V++ V+SAC+ G + K +H + +K G+ + +NNALIDMY++CG++ AR VFE M R ++SWT MI A+HG A+R F +M V P+G++F+ +L+ACSHAGL+E+G F+ M ++I P+ EHYGCMVDL GR+ L++A + + MP P ++W +L+ AC HG EL E +R+ EL+P++ G LVLLSN YA KW++V +R+ M + I K +S +E+ +++F ++ E +EKL E++ RLK + GY P L D+EEEEK + V HSEKLAL + L +K + IRIVKNLR+C DCH +KL SKVY EI+VRDR RFH ++DG CSCRDYW Sbjct: 225 IFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643 HSP 2 Score: 91.6633 bits (226), Expect = 1.903e-18 Identity = 63/232 (27.16%), Postives = 106/232 (45.69%), Query Frame = -2 Query: 655 EKDLVSWSAMISGYAESDQPQEALRLFKELQILG-IRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMP---FAPNVVIWGSLMSACQIHGETELGE 1338 E D ++ ++ GY+ESD+P ++ +F E+ G + PD + VI A N L +H A K+G L + LI MY CG +E AR VF++M N+++W +I A D A F KM + N ++ +L AG +E ++IF+ M + +++ + M+ + E+ + +PN V ++SAC G E G+ Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVS-----WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK 289 HSP 3 Score: 84.7297 bits (208), Expect = 3.999e-16 Identity = 69/261 (26.44%), Postives = 112/261 (42.91%), Query Frame = -2 Query: 595 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE-----LGEFTAKRVLELEPDHDGALVLL 1362 R +FD+M + +LV+W+A+I+ F+ + G R ML V + W N ++ Y K G LE A+ +F +M R+ +SW+ MI A +G N + YF++++ A + PN V+ GVL ACS +G E G KI + + + ++D+ R + A + E M +V W S+++ +HG+ E E TA V PD + LL Sbjct: 161 RKVFDEMHQPNLVAWNAVITA------------CFRGNDVAGAREIFDKML----------VRNHTSW-----------------NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG-KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV---TPDGISFISLL 378 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010582 ID=g.arboreum_cottongen_reftransV1_0010582; Name=g.arboreum_cottongen_reftransV1_0010582; organism=Gossypium arboreum; type=contig; length=1363bpback to top |